Metagenome / Metatranscriptome Family F020068

Basic Information
Family ID	F020068
Family Type	Metagenome / Metatranscriptome
Number of Sequences	226
Average Sequence Length	44 residues
Representative Sequence	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTRGEENG
Number of Associated Samples	190
Number of Associated Scaffolds	226

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.22 %
% of genes near scaffold ends (potentially truncated)	66.81 %
% of genes from short scaffolds (< 2000 bps)	91.15 %
Associated GOLD sequencing projects	175
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (92.478 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (19.912 % of family members)
Environment Ontology (ENVO)	Unclassified (28.761 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.018 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88 1FACEORA_2781210 2F64_01822440 3N56_05821490 4N55_05029530 5F14TC_1002506352 6JGI12635J15846_106690912 7JGI24743J22301_100978232 8JGI24035J26624_10342881 9JGIcombinedJ43975_100233051 10Ga0055453_100997153 11Ga0062589_1024527881 12Ga0062590_1014527712 13Ga0062595_1024375181 14Ga0062591_1028606412 15Ga0066674_102019952 16Ga0066674_102406091 17Ga0066672_100425115 18Ga0066672_104551091 19Ga0066677_107401801 20Ga0066683_101968801 21Ga0066680_109167091 22Ga0066688_103634061 23Ga0066684_105575581 24Ga0066676_104529562 25Ga0066676_109108801 26Ga0066675_105443771 27Ga0065712_108291681 28Ga0065715_109213731 29Ga0065715_111740041 30Ga0070683_1011274282 31Ga0066388_1020841101 32Ga0066388_1026332732 33Ga0070689_1002391913 34Ga0070687_1013122701 35Ga0070661_1012506131 36Ga0070675_1002901543 37Ga0070709_101363022 38Ga0070713_1006371811 39Ga0070713_1016592621 40Ga0070710_107395421 41Ga0070705_1016702982 42Ga0066682_103604851 43Ga0066682_106535571 44Ga0066681_107504291 45Ga0070706_1002556732 46Ga0070707_1008159862 47Ga0070698_1012963841 48Ga0073909_103446412 49Ga0070697_1002904401 50Ga0070697_1011423052 51Ga0066697_101310412 52Ga0070696_1017469491 53Ga0066701_101993311 54Ga0066661_107772982 55Ga0066692_108542293 56Ga0066707_104407852 57Ga0066707_106142621 58Ga0066707_109587441 59Ga0066698_107033263 60Ga0066698_110970462 61Ga0066700_104754642 62Ga0066700_107632461 63Ga0066670_102342062 64Ga0066693_100355713 65Ga0066708_110573822 66Ga0068854_1003558732 67Ga0070702_1006146722 68Ga0068864_1023874542 69Ga0068861_1000682241 70Ga0070717_102699483 71Ga0070717_103714511 72Ga0070717_109952291 73Ga0066651_101658921 74Ga0066651_102320512 75Ga0066651_105108721 76Ga0066652_1003345482 77Ga0070716_1007215791 78Ga0070712_1004133302 79Ga0066665_100820716 80Ga0066665_106993772 81Ga0066660_106822761 82Ga0066660_106881211 83Ga0066660_111955242 84Ga0075425_1010441543 85Ga0099791_100078582 86Ga0066710_1008771413 87Ga0066710_1023478912 88Ga0066710_1026047001 89Ga0066710_1033630071 90Ga0075418_106066122 91Ga0066709_1001070381 92Ga0075423_112635431 93Ga0105237_116447372 94Ga0126312_109278182 95Ga0134088_103266451 96Ga0134067_101375481 97Ga0134065_100161423 98Ga0134111_101240612 99Ga0134111_102024402 100Ga0134127_111617682 101Ga0134121_113773321 102Ga0134123_131808211 103Ga0105246_104356972 104Ga0137383_1000030314 105Ga0137382_105463741 106Ga0137382_109641121 107Ga0137365_104333012 108Ga0137399_102419781 109Ga0137362_102795781 110Ga0137362_110066552 111Ga0137381_103374032 112Ga0137376_107077721 113Ga0137379_105942182 114Ga0137379_116633551 115Ga0137377_111042861 116Ga0137370_102450102 117Ga0137370_106170271 118Ga0137366_100372883 119Ga0137385_102330471 120Ga0157285_102183472 121Ga0137359_105066711 122Ga0137419_114672931 123Ga0137410_110229242 124Ga0164300_111810452 125Ga0164303_102357063 126Ga0164301_118596311 127Ga0134087_102674921 128Ga0164305_112703102 129Ga0157374_118518491 130Ga0157378_101895931 131Ga0157375_110241021 132Ga0134078_100910242 133Ga0137405_12266541 134Ga0137418_107298351 135Ga0137403_1000778813 136Ga0137403_116203302 137Ga0134089_100459551 138Ga0134085_100326854 139Ga0132257_1018589402 140Ga0132255_1023187511 141Ga0182041_108689772 142Ga0182033_105882091 143Ga0184621_101073171 144Ga0184621_101366661 145Ga0184618_104417982 146Ga0184635_104179541 147Ga0184625_105554961 148Ga0066669_108176911 149Ga0173479_101846711 150Ga0193748_10294042 151Ga0193754_10389591 152Ga0193722_10146191 153Ga0193722_11224401 154Ga0193715_10143491 155Ga0193723_10315843 156Ga0193707_10087431 157Ga0193713_11183823 158Ga0193713_11454011 159Ga0193727_10418531 160Ga0193718_10475323 161Ga0193731_10563692 162Ga0193755_11969642 163Ga0193757_10205781 164Ga0210381_103866971 165Ga0210382_103271451 166Ga0179596_105337621 167Ga0210408_110403721 168Ga0193750_10435561 169Ga0222621_10561082 170Ga0222623_100360843 171Ga0207692_104913402 172Ga0207684_108089121 173Ga0207663_100548511 174Ga0207646_108501072 175Ga0207659_105320922 176Ga0207700_118655842 177Ga0207664_119591281 178Ga0207701_100900605 179Ga0207706_110899811 180Ga0207665_115887271 181Ga0207711_118939152 182Ga0207661_102571411 183Ga0207677_117137011 184Ga0207702_114579112 185Ga0209350_10744541 186Ga0209686_10995461 187Ga0209375_11667502 188Ga0209473_11584162 189Ga0209158_12698661 190Ga0257155_10392181 191Ga0257156_10657452 192Ga0257156_10913591 193Ga0209807_10397372 194Ga0209058_12224511 195Ga0209805_13405921 196Ga0209161_101231711 197Ga0209474_102514461 198Ga0179587_108399982 199Ga0208709_1047541 200Ga0208637_10327321 201Ga0209388_10372341 202Ga0307293_102960831 203Ga0307282_103876062 204Ga0307281_100624021 205Ga0307312_109718271 206Ga0307277_100242271 207Ga0307304_100300673 208Ga0307304_101318102 209Ga0075377_117318681 210Ga0075386_121736201 211Ga0075399_100007102 212Ga0170822_136682361 213Ga0170823_135877111 214Ga0170824_1005382542 215Ga0170824_1216399752 216Ga0170820_138976681 217Ga0170819_107071711 218Ga0170819_176704661 219Ga0307475_114919052 220Ga0306925_112982631 221Ga0306925_118370632 222Ga0310885_108896501 223Ga0310913_112947451 224Ga0310906_104347521 225Ga0310812_105823832 226Ga0310810_102639342
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88 1FACEORA_2781210 2F64_01822440 3N56_05821490 4N55_05029530 5F14TC_1002506352 6JGI12635J15846_106690912 7JGI24743J22301_100978232 8JGI24035J26624_10342881 9Ga0055453_100997153 10Ga0062590_1014527712 11Ga0062595_1024375181 12Ga0062591_1028606412 13Ga0066674_102406091 14Ga0066672_100425115 15Ga0066672_104551091 16Ga0066677_107401801 17Ga0066684_105575581 18Ga0065712_108291681 19Ga0070683_1011274282 20Ga0070675_1002901543 21Ga0070713_1006371811 22Ga0070710_107395421 23Ga0066682_103604851 24Ga0070706_1002556732 25Ga0070697_1002904401 26Ga0070697_1011423052 27Ga0066692_108542293 28Ga0070702_1006146722 29Ga0070716_1007215791 30Ga0070712_1004133302 31Ga0075425_1010441543 32Ga0099791_100078582 33Ga0066710_1033630071 34Ga0075418_106066122 35Ga0126312_109278182 36Ga0134067_101375481 37Ga0134111_102024402 38Ga0134123_131808211 39Ga0137382_105463741 40Ga0157285_102183472 41Ga0137419_114672931 42Ga0137410_110229242 43Ga0164303_102357063 44Ga0134089_100459551 45Ga0132255_1023187511 46Ga0184621_101073171 47Ga0184621_101366661 48Ga0184635_104179541 49Ga0193715_10143491 50Ga0193713_11454011 51Ga0193718_10475323 52Ga0193757_10205781 53Ga0210408_110403721 54Ga0207701_100900605 55Ga0209473_11584162 56Ga0257156_10657452 57Ga0257156_10913591 58Ga0209058_12224511 59Ga0310812_105823832
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42 1Ga0137379_116633551 2FACEORA_2781210 3F64_01822440 4N56_05821490 5N55_05029530 6JGI24035J26624_10342881 7Ga0055453_100997153 8Ga0062590_1014527712 9Ga0066672_104551091 10Ga0066676_104529562 11Ga0065715_111740041 12Ga0070689_1002391913 13Ga0070661_1012506131 14Ga0070675_1002901543 15Ga0070713_1006371811 16Ga0066682_103604851 17Ga0070707_1008159862 18Ga0066693_100355713 19Ga0066651_101658921 20Ga0070712_1004133302 21Ga0075418_106066122 22Ga0105237_116447372 23Ga0126312_109278182 24Ga0134067_101375481 25Ga0134065_100161423 26Ga0134123_131808211 27Ga0137382_105463741 28Ga0137365_104333012 29Ga0137359_105066711 30Ga0137419_114672931 31Ga0137410_110229242 32Ga0164303_102357063 33Ga0134087_102674921 34Ga0137405_12266541 35Ga0134089_100459551 36Ga0132255_1023187511 37Ga0182033_105882091 38Ga0184635_104179541 39Ga0193715_10143491 40Ga0193723_10315843 41Ga0210408_110403721 42Ga0193750_10435561 43Ga0207701_100900605 44Ga0207677_117137011 45Ga0209473_11584162 46Ga0209805_13405921 47Ga0209474_102514461 48Ga0179587_108399982 49Ga0208709_1047541 50Ga0209388_10372341 51Ga0307281_100624021 52Ga0307277_100242271 53Ga0307304_100300673 54Ga0075377_117318681 55Ga0306925_112982631 56Ga0310906_104347521
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.29% β-sheet: 0.00% Coil/Unstructured: 65.71%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Pfam ID	Name	% Frequency in 226 Family Scaffolds
PF01936	NYN	4.87
PF14534	DUF4440	4.87
PF12872	OST-HTH	1.77
PF04255	DUF433	1.33
PF08240	ADH_N	1.33
PF00072	Response_reg	0.88
PF00753	Lactamase_B	0.88
PF05960	DUF885	0.88
PF00581	Rhodanese	0.44
PF00034	Cytochrom_C	0.44

COG ID	Name	Functional Category	% Frequency in 226 Family Scaffolds
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	4.87
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	1.33
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.88
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	0.44
COG0858	Ribosome-binding factor RbfA	Translation, ribosomal structure and biogenesis [J]	0.44
COG1193	dsDNA-specific endonuclease/ATPase MutS2	Replication, recombination and repair [L]	0.44
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.44
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.44
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.44
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.44

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.48 %
Unclassified	root	N/A	7.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.48 %
Unclassified	root	N/A	7.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.48 %
Unclassified	root	N/A	7.52 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.44 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	76.11 %
Unclassified	root	N/A	7.52 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.44 %
Unclassified	root	N/A	7.52 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	76.11 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.44 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.33 %
Unclassified	root	N/A	7.52 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	37.17 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.44 %
Unclassified	root	N/A	7.52 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	37.17 %

Name	Rank	Taxonomy	Distribution
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.44 %
Unclassified	root	N/A	7.52 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.44 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	37.17 %

Name	Rank	Taxonomy	Distribution
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.44 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.44 %
Unclassified	root	N/A	7.52 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	37.17 %

Name	Rank	Taxonomy	Distribution
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.44 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.44 %
Unclassified	root	N/A	7.52 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	37.17 %

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01DUB7K	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	520	Open in IMG/M
2170459011\|GI3SL7401AV9U4	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	517	Open in IMG/M
2170459012\|GOYVCMS01A3NWH	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	501	Open in IMG/M
2189573000\|GPBTN7E02HDSOK	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300000559\|F14TC_100250635	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	649	Open in IMG/M
3300001593\|JGI12635J15846_10669091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	600	Open in IMG/M
3300001991\|JGI24743J22301_10097823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	630	Open in IMG/M
3300002126\|JGI24035J26624_1034288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	559	Open in IMG/M
3300002899\|JGIcombinedJ43975_10023305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	998	Open in IMG/M
3300004006\|Ga0055453_10099715	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.94%
Host-Associated	Host-Associated	11.06%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	4.42%
Plants	Host-Associated → Plants	11.06%
Terrestrial	Environmental → Terrestrial	84.51%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Marine	Environmental → Aquatic → Marine	0.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.75%
Sediment	Environmental → Aquatic → Sediment	3.10%
Soil	Environmental → Terrestrial → Soil	84.51%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.10%
Loam	Environmental → Terrestrial → Soil → Loam	15.49%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.21%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.44%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.44%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.44%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.44%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.10%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.21%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.33%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.44%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.95%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental	Open in IMG/M
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M

Showing 1 to 10 of 190 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_2781210	2032320005	Soil	MTAMMIGDGKCVAAGGARLKWHTIPIADIDLIARNTPGEENGVAPSLGGR
F64_01822440	2170459011	Grass Soil	MMIDDRKRVATDGAGFQGHRPPIADIDRIARCIRTH
N56_05821490	2170459012	Grass Soil	MTAMMIDGGKRVAAGGARLQWHMILIADIDLIARNRFADFERLTRT
N55_05029530	2189573000	Grass Soil	MMIYSGKRVAAGGARFQWHMILIADIDLIARNRFADVIR
F14TC_1002506352	3300000559	Soil	MAATMVVDRKRVAAGGARLQWHMIPIADIDLIAKNRFADVIR*
JGI12635J15846_106690912	3300001593	Forest Soil	RRNCKRCGSTMTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTRGEENGVASSR*
JGI24743J22301_100978232	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMINRGKGIAAGRARLQWHAIPIAGIDLIARNRFADVI
JGI24035J26624_10342881	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	MTTMMIDDGERVAAGGARLQWHMIPIAEIDLIARNTRGD
JGIcombinedJ43975_100233051	3300002899	Soil	MTATMIDDGKRVAAGGARLQWHMIPIADIDLIARNTRTRGEEN
Ga0055453_100997153	3300004006	Natural And Restored Wetlands	MTAMMIDNGKRVAAGGTRFQWHLIAIADIDVIARNTRGDETGVAFLF
Ga0062589_1024527881	3300004156	Soil	MTAMMINRGKGIAAGRARLQWHAIPIAGIDLIARNRFADVIR*
Ga0062590_1014527712	3300004157	Soil	MTAMMIHHGKGITADWARIHWHTIPIADIELIARNTRGEAEIVLG*
Ga0062595_1024375181	3300004479	Soil	KRIAADGARLQWHMIPIADIELIARNTRGEENGVAFRRDNGI*
Ga0062591_1028606412	3300004643	Soil	MTAMMIDNGKRIAAGGARLQGHVIPIADIDLIARNTPKEE
Ga0066674_102019952	3300005166	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTGGEELKR*
Ga0066674_102406091	3300005166	Soil	MTALMIHDGKRVTAGGARLQWHMIPIADIGLIARNTRGEEIGVAFLRDHGI*
Ga0066672_100425115	3300005167	Soil	MMIHDGKRVTADGARLQWHMIPIADIDLIARNTRGEENGV
Ga0066672_104551091	3300005167	Soil	MTAMMIDDRKRVAAGGARLKWHTIPIADIDLIANNTRGEEIGVASKLRNSSQGI*
Ga0066677_107401801	3300005171	Soil	RCGSTMTAMMIDDGKRVAAGGARLQWHMIPIAGIDLIARNRFPDVIR*
Ga0066683_101968801	3300005172	Soil	MTAMMIDHGKRVAAGGARLQWHMIPIADIDLIARNTRGEENG
Ga0066680_109167091	3300005174	Soil	MTAMMIHDGKRVTADGARLQWHMIPIADIDLIARNTRGEENGVVFHCVHGI*
Ga0066688_103634061	3300005178	Soil	RCGSTMTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTRGEENGVASKHLASLS*
Ga0066684_105575581	3300005179	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTGGEADGVACSLRER*
Ga0066676_104529562	3300005186	Soil	GSTMTAMMIDDGKRVAAGGARFQWHMIPIADIDLIARNRFPDVIR*
Ga0066676_109108801	3300005186	Soil	RCGSTMTAMMIDDGKRVAAGGARLKGHMIPIADIDLIARNT*
Ga0066675_105443771	3300005187	Soil	STMTAMMIDDGKRVAAGGARLQWHMILIADIDLIARNTGGEADGVACSLRER*
Ga0065712_108291681	3300005290	Miscanthus Rhizosphere	MIRDGKRVAAGGARLQWHTIPIADIDLIARNRFADIEGVKALKR*
Ga0065715_109213731	3300005293	Miscanthus Rhizosphere	RNSPGCGSTMTAMMIDDGKRVAADGAGLQWHMIPIADIDLIARNTRGEKKGSRFT*
Ga0065715_111740041	3300005293	Miscanthus Rhizosphere	MIRDGKRVAAGGARLQWHTIPIADIDLIARNRFADVEWVKALKR*
Ga0070683_1011274282	3300005329	Corn Rhizosphere	MTTMMIDDGERVAAGGARLQWHMIPIADIDLIARNTQGEEMGVASRSVA*
Ga0066388_1020841101	3300005332	Tropical Forest Soil	STMTAMMIDDGKRVTADGARLQWHMIPIAGIELIARNTRGEENGVAFRHDHGI*
Ga0066388_1026332732	3300005332	Tropical Forest Soil	MTAMMIDDGKRVAADGARLQWHMIPVADIDLIARNTRGEEMDCV*
Ga0070689_1002391913	3300005340	Switchgrass Rhizosphere	MTAMMINRGKGIAAGRARLQWHAIPIAGIDLIARNRFEDVIR*
Ga0070687_1013122701	3300005343	Switchgrass Rhizosphere	MTAMMINRGKGIAAGRARLQWHAIPIAGIDLIARNRFADV
Ga0070661_1012506131	3300005344	Corn Rhizosphere	MTAMMIDDGKRVAAGGARLQWHRITIADIDLIARNRFAQDER*
Ga0070675_1002901543	3300005354	Miscanthus Rhizosphere	MTAMMIYGGKRVAAGGARLQWHVIPIADIDLIARNTPKEENGIASSPFIIADVKR*
Ga0070709_101363022	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMIDDGKRVAAGGARLQWHMITIADIDLIAKNRFADVIR*
Ga0070713_1006371811	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	STMSAMMTRDGKRVAAGGARVQWHMIPIADIDLIARNTRDEENWVASKHLASLS*
Ga0070713_1016592621	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	STMSAMMTRDGKRVAAGGARVQWHMIPIADIDLIARNTRGEENGVASSPFIIGDLKR*
Ga0070710_107395421	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RVAAGGARVQWHMIPIADIDLIARNTRGEENGVASKTFRFAVVIR*
Ga0070705_1016702982	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTGGKWGRV*
Ga0066682_103604851	3300005450	Soil	TAMMIHHGKRVAAGGARLQWHIIPIADIDLIARNTGGKWVASSPDIIVDLKR*
Ga0066682_106535571	3300005450	Soil	MTAMMIGDGKRVTAGGARLQWHMIPIADIGLIARNTRGEEIGVAFLRDHGI*
Ga0066681_107504291	3300005451	Soil	TMTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTGGNGVASSLRGS*
Ga0070706_1002556732	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMIDDGKGVAAGGARLQWHMIPIADIDLIARNTAGDENAVASKHLTFVRTAELKHRL
Ga0070707_1008159862	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMIDHGKRIAADGARLQWHMIPIADIELIARNTRGQENGVAFRRDNGI*
Ga0070698_1012963841	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	PRCGSTMTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARPV*
Ga0073909_103446412	3300005526	Surface Soil	MTAVMIGDGKRVAAGGARLQWHTIPIADIDLIARNTRAEENGVASKHLAPLS*
Ga0070697_1002904401	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMVEDGKRVAAGGARLQGHMIPIADIDLIARNTRGEEMGSRLHI*
Ga0070697_1011423052	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMIDDGKRVAADGAGLQWHMIPIADIDLIARNTRGEKKGSRFT*
Ga0066697_101310412	3300005540	Soil	CPRWGSTMTAMMIDDGKRVAAGGARLKWHTIPIADIDLIANNTRGEEIGVASKLRNSSHGI*
Ga0070696_1017469491	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMIDDGKRVAADGAGLQWHMIPIADIDLIARNTRGEEM
Ga0066701_101993311	3300005552	Soil	MTAMMIDDRKRVAAGGARLQWHMIPIADIDLIARNTGGEE
Ga0066661_107772982	3300005554	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARTTGGKWDRV*
Ga0066692_108542293	3300005555	Soil	AMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTRGEENGVASKHLASLS*
Ga0066707_104407852	3300005556	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTGGKWDRVFT*
Ga0066707_106142621	3300005556	Soil	MTAMMIDDGKRVAADGARLKWHTIPIADIDLIANNTRG
Ga0066707_109587441	3300005556	Soil	CGSTMTAMMIDDGKRVAAGGARLQWHLIPIADIDVIARNTRGEENGVASNI*
Ga0066698_107033263	3300005558	Soil	MTAVMIDDGKRVAAGRARLQWHMIPIADIDLIARNT
Ga0066698_110970462	3300005558	Soil	TAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTRGEENGVASSR*
Ga0066700_104754642	3300005559	Soil	MTAMMIDDGKRVAADGARLKWHTIPIADIDLIANNTRGEEIGVASKLRNSSQGI*
Ga0066700_107632461	3300005559	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIAGIDLIARNRFPDVIR*
Ga0066670_102342062	3300005560	Soil	MTAMMIDDGKRVAAGGARLQWHVIPIADIDLIARNTGGEADGVACSLRER*
Ga0066693_100355713	3300005566	Soil	MAATMVVNRKCVAAGGARLQWHMIPIADIDLIATNRFADVIR*
Ga0066708_110573822	3300005576	Soil	MTAMMIDDRKRVAAGGARLKWHTIPIADIDLIANNTRGEE
Ga0068854_1003558732	3300005578	Corn Rhizosphere	MTAMMINRGKGIAAGRARLQLHALPIAGIDLIARNRFADVIR*
Ga0070702_1006146722	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MTTMMIDDGERVAAGGARLQWHMIPIADIDLIARNRFADVIR*
Ga0068864_1023874542	3300005618	Switchgrass Rhizosphere	MTTMMIDDGERVAAGGARLQWHRITIADIDLIARNRFAQDER*
Ga0068861_1000682241	3300005719	Switchgrass Rhizosphere	MTTMMIDDGERVAAGGARLQWHMIPIADIDLIARN
Ga0070717_102699483	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMIDDGKRVAADRARLQWHMIPIADIELIARNTRGEENGVAFRRDNGI*
Ga0070717_103714511	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IDGGKRVAAGGARFQWHMIPIADIDLIARNRFADVIPLKG*
Ga0070717_109952291	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMIDGGKRVAAGGARFQWHMIPIADIDLIARNRFADVIP
Ga0066651_101658921	3300006031	Soil	MTAMMTNGGKRIAAGGARFQWHVIPIADIDLIARNRFADVIR*
Ga0066651_102320512	3300006031	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNT
Ga0066651_105108721	3300006031	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNIRGEESA
Ga0066652_1003345482	3300006046	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTGGE
Ga0070716_1007215791	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMIDHGKRIAADGARFQWNMIPIADIELIARNTRG
Ga0070712_1004133302	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMIDDRKRVAADGTWLQWHVIPIADIELIARNT*
Ga0066665_100820716	3300006796	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTRGEENGIASSPGEKMGS
Ga0066665_106993772	3300006796	Soil	MTALMIHDGKRVTAGGARLQWHMIPIADIGLIARNTRGEEIGVAFLCDHGI*
Ga0066660_106822761	3300006800	Soil	MTAMMIHDGKRVTADGARLQWHMIPIADIDLIARNTRGEENGV
Ga0066660_106881211	3300006800	Soil	MTAMMIDDGKRVAAGGARLQWHVIPIADIDLIARNTGGEADGVA
Ga0066660_111955242	3300006800	Soil	MTATMIDGGKRVAAGGARLQWHIIPIADIDLIARNTGGKWG
Ga0075425_1010441543	3300006854	Populus Rhizosphere	GARLQWHMIPIADIDLIARNTRGGENGLGLNSEILREHGI*
Ga0099791_100078582	3300007255	Vadose Zone Soil	MTAMMIDEGKRVAAGGARLQWHMIPIADIELIARNTPGKEDGVASSPFTLPGI*
Ga0066710_1008771413	3300009012	Grasslands Soil	MTAMMIGDGKRVTAGGARLQWHMIPIADIGLIARNT
Ga0066710_1023478912	3300009012	Grasslands Soil	MTALMIHDGKRVTAGGARLQWHMIPIADIGLIARNTRGEEIGVAFLRDHGI
Ga0066710_1026047001	3300009012	Grasslands Soil	GKRVAAGGARLQWHMIPIADIDLIARNTRGEENGVAFLRDHGI
Ga0066710_1033630071	3300009012	Grasslands Soil	GKRVAAGGARLQWHMIPIADIDLIARNTGGKWGRVFT
Ga0075418_106066122	3300009100	Populus Rhizosphere	MTAMMIDDGKRITADGARLQWHMVLIADMEVIARNTRGEENGLRLGASH
Ga0066709_1001070381	3300009137	Grasslands Soil	MTAMMIDDGKRVAADGARLKWHTIPIADIDLIASNTRGEENGVASKLRNSSHGN*
Ga0075423_112635431	3300009162	Populus Rhizosphere	MTAMMIDDGKRVAAGGARLQWHMLPIADIDLIARN
Ga0105237_116447372	3300009545	Corn Rhizosphere	MTAMMIDNGKRIAAGGARLQGHVIPIADIDPIARNTEGKWSRV*
Ga0126312_109278182	3300010041	Serpentine Soil	MTAIMIEGGKRVAAGGARFQHMIPIADIDLIARNTPREEIEGFETLDYSLA*
Ga0134088_103266451	3300010304	Grasslands Soil	MMIGDGKRVTAGGARLQWHMIPIADIELIARNTRGEENGVAFLRNHGI*
Ga0134067_101375481	3300010321	Grasslands Soil	MTAMMIDDGKRVAAAGTRFQWHMIAIADIDLIARNTGWKN*
Ga0134065_100161423	3300010326	Grasslands Soil	MIDDGKRVAADGARLKWHTIPIADIDLIASNTRGEENGVAPS
Ga0134111_101240612	3300010329	Grasslands Soil	MTAMMIEDGNRVAAGGARLQWHRIPIADIDLIARNTGEE
Ga0134111_102024402	3300010329	Grasslands Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTGGKWVASSPDIIVDLKR*
Ga0134127_111617682	3300010399	Terrestrial Soil	MTAMMINRGKGIAAGRARLQWHAIPIAGIDLIARNRFAGVIR*
Ga0134121_113773321	3300010401	Terrestrial Soil	MTAMMINRGKGIAAGRARLQWHALPIAGIDLIARNRFA
Ga0134123_131808211	3300010403	Terrestrial Soil	MTAMMIGDGKRIAAGGARFQWHTILIAEMGLIARNTRGEEMRLRRNS
Ga0105246_104356972	3300011119	Miscanthus Rhizosphere	MTAMMINRGKGIAAGRARLQWHALPIAGIDLIARNRFADVIR*
Ga0137383_1000030314	3300012199	Vadose Zone Soil	MTAMMIDDGKRVAAGGARFQWHMIPIADIDLIARNTPSEETGLALSRFIITDLKR*
Ga0137382_105463741	3300012200	Vadose Zone Soil	SRSTMTAMMIDDGKRIAAGGARLKGHVIPIADIDLIARNTPKKENRVASSSDIIADVKR*
Ga0137382_109641121	3300012200	Vadose Zone Soil	MAAMMVEDRKRVAAGGARLQWHMIPIADIDLIARNTRGEENGVAS
Ga0137365_104333012	3300012201	Vadose Zone Soil	MTALMIHDGKRVTAGGARLQWHMIPIADIGLIARNTRGEEIGVAFLRDHDI*
Ga0137399_102419781	3300012203	Vadose Zone Soil	GSTMTAMMIDDGKRVAAAGTRFQWHMIPIADIDLIARNTHG*
Ga0137362_102795781	3300012205	Vadose Zone Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTR
Ga0137362_110066552	3300012205	Vadose Zone Soil	MTAMMIDDGKRVAAGGARLQWHMIAIADIDLIARNTGGKWGRVFT*
Ga0137381_103374032	3300012207	Vadose Zone Soil	MTAMMIDDRKRVAAGGARLQWHMIPIADIDLIARN
Ga0137376_107077721	3300012208	Vadose Zone Soil	MAAMMVEDRKRVAAGGARLQWHMIPIADIDLIARNTRGEENG
Ga0137379_105942182	3300012209	Vadose Zone Soil	MTAMMIDDRKRVAAGGARLQWHMISIADIDLIARNTGG
Ga0137379_116633551	3300012209	Vadose Zone Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTRGEENG
Ga0137377_111042861	3300012211	Vadose Zone Soil	MTAMMIDDGKRVAAGGARLQWHTIPIADIDLIARNT
Ga0137370_102450102	3300012285	Vadose Zone Soil	MTAMMIDGGKRVAAGGARLKGHVIPIADIDLIARNTQRKN*
Ga0137370_106170271	3300012285	Vadose Zone Soil	RCGSTMTAMMIDDGKRVAAGGARLQWHMIPIADIDLIASNTRGEENRVAF*
Ga0137366_100372883	3300012354	Vadose Zone Soil	MTALMIHDGKRVTAGGARLQWHMIPIAEIGLIARNTRGEEIGVAFLRDHGI*
Ga0137385_102330471	3300012359	Vadose Zone Soil	PRRNCPRWGSTMTAMMIDDRKRVAAGGARLKWHTIPIADIDLIANNTRGEEIGVASKLRNSSQGI*
Ga0157285_102183472	3300012897	Soil	MTAMMIDSGKRVAAGRARFQWHMIPIADIDLIARNTRGEELKGCFG
Ga0137359_105066711	3300012923	Vadose Zone Soil	MTAMMIDGGKRVAAGRARLKGQMIPIADIDLIARNRFPDVIR*
Ga0137419_114672931	3300012925	Vadose Zone Soil	MTAMMIYDGKRVAAGGARFQWHMIPIADIDLIARNTYRFAYVKALKR*
Ga0137410_110229242	3300012944	Vadose Zone Soil	MTAMMIYDGKRVAAGGARLQWHTILIADNDPIARNTGRKSGR
Ga0164300_111810452	3300012951	Soil	MTAMMFDGGKRVAAGGARLQWHMTPIADIDLIARNTGEE
Ga0164303_102357063	3300012957	Soil	MAAMMVEDRKRVAADGARLQWHTIPIADIDLIARNTEGKKMGVAS*
Ga0164301_118596311	3300012960	Soil	MTAMMIDHGKRIAADGARFQWHMIPIADIELLARNT
Ga0134087_102674921	3300012977	Grasslands Soil	STMTAMMIDGGKRVAAGGARLKGHVIPIADIDLIARNTQRKN*
Ga0164305_112703102	3300012989	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTEGKKMGRVLNI*
Ga0157374_118518491	3300013296	Miscanthus Rhizosphere	MAAMMVEDRKRVAAGGARLQWHMIPIADIDLIARNTEGKKMGS
Ga0157378_101895931	3300013297	Miscanthus Rhizosphere	MAAMMVEDRKRVAAGGARLQWHMIPIADIDLIARNT
Ga0157375_110241021	3300013308	Miscanthus Rhizosphere	MAAMMVEDRKRVAAGGARLQWHMIPIADIDLIARN
Ga0134078_100910242	3300014157	Grasslands Soil	MTAMMIDDRKRVAAGGARLKWHTIPIADIDLIANNTRGEEI
Ga0137405_12266541	3300015053	Vadose Zone Soil	MTAMMIDDGKRVAAGGARLQWHMRPIADIDLIARNTRVIARNT
Ga0137418_107298351	3300015241	Vadose Zone Soil	MTAMMIDDGKRVAAGRARLQWHIIPIADIDPIARNTRGEENGLAFPRDNGI*
Ga0137403_1000778813	3300015264	Vadose Zone Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTRGEENGASSPDIIVDLKR*
Ga0137403_116203302	3300015264	Vadose Zone Soil	MTAMMIDEGKRVAAGGARLKWHMIPIADIDLIARNTRGEENGVASSLRGR*
Ga0134089_100459551	3300015358	Grasslands Soil	AMMIDDGKRVAAGGARLQWHTIPIADIDLIARTTGGKWDRV*
Ga0134085_100326854	3300015359	Grasslands Soil	ALMIHDGKRVTAGGARLQWHMIPIADIGLIARNTRGEEIGVAFLRDHGI*
Ga0132257_1018589402	3300015373	Arabidopsis Rhizosphere	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIAKNRFAD
Ga0132255_1023187511	3300015374	Arabidopsis Rhizosphere	MTAMMIDGGKRVAAGGARLQWHAISIAYINLIARNTRKEEMRP
Ga0182041_108689772	3300016294	Soil	MTAMMIHDGKRVTAGGATLQWHMIPIADIGLIARNTRGEENGVAFLRDHGI
Ga0182033_105882091	3300016319	Soil	MTAVMIDDGKRVAADGARLQWHTVPIADIELIARNTRGEENGLRLGA
Ga0184621_101073171	3300018054	Groundwater Sediment	MTAMMIDDGKRVAAGGARLQWHKIPIADIDLIARNTRGKENGVASEDLTFNLR
Ga0184621_101366661	3300018054	Groundwater Sediment	CGSAMAAMMIDDGKRVAAGGARFQWHMVPIADIDLIARNT
Ga0184618_104417982	3300018071	Groundwater Sediment	MTAMMIYGGKRVAAGGARLEWHTIPIADIDLIARNT
Ga0184635_104179541	3300018072	Groundwater Sediment	MTAMMIDDGKRVAAGGARLQWHMIRSRKIDIIARNTRGEDNGVASSLRGRRRVEWSDWDERH
Ga0184625_105554961	3300018081	Groundwater Sediment	MTAMMIDGGKRVAAGGARLQWHMIPIADIDLIARN
Ga0066669_108176911	3300018482	Grasslands Soil	MIDDGKRVAAGGARLQWHMIPIADIDLIARNTGGE
Ga0173479_101846711	3300019362	Soil	STMTAMMINRGKGIAAGRARLQWHAIPIAGIDLIARNRFADVIR
Ga0193748_10294042	3300019865	Soil	MTAMMIYDGKRVAAGGARFQWHMIPIADIDLIARNTPGE
Ga0193754_10389591	3300019872	Soil	MTAMMIGDGKRVAAGGARLQWHMIPIADIDLIARNTGGKWESR
Ga0193722_10146191	3300019877	Soil	MTAMMIYGGKRVAAAGARLKWHTIPIADIDLIARNTGEK
Ga0193722_11224401	3300019877	Soil	MTAMMIGDGKRVAAGGARLQWHMIPIADIDLIARNTGGKCG
Ga0193715_10143491	3300019878	Soil	MIDGGKRVAAGGARLKWHITPIADIDLIARNTPKEEIEGLQRRPD
Ga0193723_10315843	3300019879	Soil	MTAMMIYGGKRVAAAGARLKWHTIPIADIDLIARNTGEKENPVASLPFIITDLK
Ga0193707_10087431	3300019881	Soil	MIDDGKRVAAGGARLQWHMIPIADIDLIARNTGGKCGRVFTFH
Ga0193713_11183823	3300019882	Soil	MTAMMIDDGKRVAAGGARLQWHLIPIADIDLIARNTGRKCGRIFT
Ga0193713_11454011	3300019882	Soil	MIGDGKRVAAGGARLQWHTIPIADIDLIARITRGEENGVASLRER
Ga0193727_10418531	3300019886	Soil	MTAMLIDDGKRVAAGGARLQWHTTPIADIDLIASNTRGEENGVASKNISL
Ga0193718_10475323	3300019999	Soil	MMIYGGKRVAAGGARLEWHTIPIADIDLIARNTGE
Ga0193731_10563692	3300020001	Soil	MTAMMIYGGKRVAAAGARLKWHTIPIADIDLIARNTGEKENPVASLPFIITGLK
Ga0193755_11969642	3300020004	Soil	MTAMMIYGGKRVAAAGARLKWHTIPIADIDLIARNTGEKEN
Ga0193757_10205781	3300020008	Soil	MTATMIDDGKRVAAGGTRLQWHMIPIADIDLIARNTGEEVEGLLSGPNFLFVCAS
Ga0210381_103866971	3300021078	Groundwater Sediment	MTAMMIDDGKRVAAGGARLKWHTIPIADIDLIARNTAR
Ga0210382_103271451	3300021080	Groundwater Sediment	RRRGSTMTAMMIGDGKRVAAGGARLQWHAIPIADIDLIARNTPGEENRVASSLRGR
Ga0179596_105337621	3300021086	Vadose Zone Soil	MTAMMIDHGKRIAADGARLQWHMIPIADIELIARNTRGEENGVAFRRDNAF
Ga0210408_110403721	3300021178	Soil	MTAMMIDGGKRVAAGGARLKWHMIPIADIDLIARNTGGKMGSRLN
Ga0193750_10435561	3300021413	Soil	MTATMIDDGKRVAAGGTRLQWHIIPIADIDLIASNTGEEV
Ga0222621_10561082	3300021510	Groundwater Sediment	MTAMMIYGGKRVAAGGARLQWHVIPIADIDLIARNTPKEENGIASSPFIIADVKR
Ga0222623_100360843	3300022694	Groundwater Sediment	MTAMMIDGGKRVAAGGARLQWHMIPIADIDLIARNIGGKW
Ga0207692_104913402	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTAVMIDDGKRVAADGARLQWHAVPIADIELIARNTRGEEMGCVQE
Ga0207684_108089121	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	CGNTMTAMMIDDGKRVAADRARLQWHMIPIADIELIARNTRGEENGVAFRRDNGI
Ga0207663_100548511	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MVEDRKRVAAGGARLQWHTIPIADIDLIARNTEGKKNGV
Ga0207646_108501072	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAAMVIDDGKRVAADGARLQWHMIPIADIDLIARNTRGEENGVAFLREHGI
Ga0207659_105320922	3300025926	Miscanthus Rhizosphere	MTTMMIDDGERVAAGGARLQWHMIPIADIDLIARNTQGEEMGVASRSVA
Ga0207700_118655842	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTAMMIDSGKRVAAGGARLQWHMTPIADIDLIARNT
Ga0207664_119591281	3300025929	Agricultural Soil	MTAMMIDDGKRVAADGAGLQWHMIPIADIDLIARNTRGEKKGSRFT
Ga0207701_100900605	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAAMMVEDRERVAAGGARLQWHMIPFADIDLIARN
Ga0207706_110899811	3300025933	Corn Rhizosphere	MTAMMINRGKGIAAGRARLQWHALPIAGIDLIARNRFADVI
Ga0207665_115887271	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MIDDGKRVAADGARLQWHLIPIADIDLIARNTRGEE
Ga0207711_118939152	3300025941	Switchgrass Rhizosphere	MTTMMIDDGERVAAGGARLQWHMIPIAEIDLIARNT
Ga0207661_102571411	3300025944	Corn Rhizosphere	GSTMTAMMINRGKGIAAGRARLQWHAIPIAGIDLIARNRFADVIR
Ga0207677_117137011	3300026023	Miscanthus Rhizosphere	MTAMMIYDGKRVAAGGTRFQWHAIPIADIDLIARNTRGEEMGS
Ga0207702_114579112	3300026078	Corn Rhizosphere	MTAMMINRGKGIAAGRARLQWHAIPIAGIDLIARNRFEDVIR
Ga0209350_10744541	3300026277	Grasslands Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARN
Ga0209686_10995461	3300026315	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTRG
Ga0209375_11667502	3300026329	Soil	KRVAAGGARLQWHIIPIADIDLIARNTGGKWVASSPDIIVDLKR
Ga0209473_11584162	3300026330	Soil	MTAMMIDGGKRVAAGWARLQWHMMSIADIDLIARNTGENAVASSLESFQAGPKKI
Ga0209158_12698661	3300026333	Soil	MMIDDGKRVAAGGARLQWHTIPIADIDLIARNTGGKWDRV
Ga0257155_10392181	3300026481	Soil	MTAMMIDGGKRVAADGARFQWHMIPIADIDLIARNT
Ga0257156_10657452	3300026498	Soil	MMIEDGNRVAAGGARLQWHIIPIADIDLIARNTGGKWVASKHFRSH
Ga0257156_10913591	3300026498	Soil	PQWDRTMTAMMIEDGNRVAAGGARLQWHIIPIADIDLIARNT
Ga0209807_10397372	3300026530	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIATK
Ga0209058_12224511	3300026536	Soil	ARLQWHMIPIADIGLIARNTRGEEIGVAFLRDHGI
Ga0209805_13405921	3300026542	Soil	MTAMMVHDGKRVTAGGARLQWHTIPIADIVLIARNTRGEENR
Ga0209161_101231711	3300026548	Soil	MIDDGKRVAAGGARLQWHMIPIADIDLIARNTRGEENG
Ga0209474_102514461	3300026550	Soil	MTAMMIDHGKRVAAGGARFQWHMIPIADIDLIARNREGK
Ga0179587_108399982	3300026557	Vadose Zone Soil	MTAMMIDDGKRVAAAGTRFQWHMIPIADIDLIARNTHGQGNGVRVI
Ga0208709_1047541	3300026693	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIAGIDLIARNTGIGSVEGLKR
Ga0208637_10327321	3300027401	Soil	MTAMMIDDGKRVAAGGTRFQWHMTPIADIDLIARN
Ga0209388_10372341	3300027655	Vadose Zone Soil	MTAMMIDEGKRVAAGGARLQWHMIPIADIELIARNTPGKEDGVASSPFTLPGI
Ga0307293_102960831	3300028711	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTRGEEDGVASKHFRSHPG
Ga0307282_103876062	3300028784	Soil	MIDDGKRVAAGGARLQWHMIPIADIDLIARNTRGEEDGVASKHFRS
Ga0307281_100624021	3300028803	Soil	MMIDDGKRVAAGGTRFQWHIIPIADIDLIARNTRGEELKG
Ga0307312_109718271	3300028828	Soil	MTAMMIYGGKRVAAGGARLEWHTIPIADIDLIARNTPKKE
Ga0307277_100242271	3300028881	Soil	NTMTAMMIYGGKRVAAGGARLKWHITPIADIDLIARNTGGEESLNR
Ga0307304_100300673	3300028885	Soil	MTAMMIEDGKRIATGGARLQWHMIPIANIDLIARNTGGN
Ga0307304_101318102	3300028885	Soil	MTAMMIDGGKRVAAGGARLQWHMIPIADIDLIARNIGG
Ga0075377_117318681	3300030844	Soil	MTAVMIDDGKRVAAGGARLQWHTVPIADIDLIARNTGGKWGRV
Ga0075386_121736201	3300030916	Soil	MTAMLIDDGKRVAAAGTRFQWHMIPIADIDLIARNTR
Ga0075399_100007102	3300030967	Soil	MTAMMIDDGKRVAAGGARFQWHMIPIADIDLIARNTGEEEMRS
Ga0170822_136682361	3300031122	Forest Soil	MTAMMIDGGKRVAAGGARFQWHMIPIADIDLIARNRFADVV
Ga0170823_135877111	3300031128	Forest Soil	AMMIDDGKRVAAGGARLQWHMIPIADIDLIARNRFADVIR
Ga0170824_1005382542	3300031231	Forest Soil	MTRNGKRVAAGGARVQWHMIPIADIDLIARNTRDEENGVASSPF
Ga0170824_1216399752	3300031231	Forest Soil	MTAMMIDGGKCVAAGGARLQWHIIPIADIDLIARNRFA
Ga0170820_138976681	3300031446	Forest Soil	MIYGGKRVAAGGARFQWHMILIADIDLIARNRFADVNR
Ga0170819_107071711	3300031469	Forest Soil	MTAMMIGDGKCVAAGGARFQWHVIPIADIDLIARNT
Ga0170819_176704661	3300031469	Forest Soil	MTAVMIDDGKRVAAGGARLQWHTVPIADIDLIARNTGGKWGR
Ga0307475_114919052	3300031754	Hardwood Forest Soil	MTAMMIDDRKRVAAGGARLQWHMIAIADIDLIARNTRGEES
Ga0306925_112982631	3300031890	Soil	MTAMMIEDGERVAADGAGLQWHMVPIADIELIARNTRGEGNGLR
Ga0306925_118370632	3300031890	Soil	MTAMMIDDGKRITAGGARLQWHTIPIADIDLIARNTRGEENGVALLRD
Ga0310885_108896501	3300031943	Soil	MAAMMVDDGKRVAAGGARLQWHMIPIADIDLIARNTGGKENGVASSPDIIADLKR
Ga0310913_112947451	3300031945	Soil	MTAMMIDDGKRITAGGARLQWHTIPIADIDLIARNTRGEENGVALLRDH
Ga0310906_104347521	3300032013	Soil	MTAMMIDDGKRVAAGGARLQWHMIPIADIDLIARNTGRKWGCVFT
Ga0310812_105823832	3300032421	Soil	DDGKRVAAGGARLQWHMIPIADIDLIARNTRGGENGENGVASEDLTFERPEKLRVRS
Ga0310810_102639342	3300033412	Soil	MTAIMIDDGKRIAADGARLQWHMIPIADMELIARNT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F020068

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences