NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F021890

Metagenome / Metatranscriptome Family F021890

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F021890
Family Type Metagenome / Metatranscriptome
Number of Sequences 217
Average Sequence Length 58 residues
Representative Sequence MGAVVWAETPDDDRDEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER
Number of Associated Samples 167
Number of Associated Scaffolds 217

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.64 %
% of genes near scaffold ends (potentially truncated) 18.43 %
% of genes from short scaffolds (< 2000 bps) 83.87 %
Associated GOLD sequencing projects 159
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.539 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(29.954 % of family members)
Environment Ontology (ENVO) Unclassified
(32.719 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.770 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.24%    β-sheet: 0.00%    Coil/Unstructured: 82.76%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540455055MGAVVWAETPDDDRDEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQERSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
99.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Serpentine Soil
Glacier Forefield Soil
Grasslands Soil
Soil
Permafrost
Soil
Grasslands Soil
Hardwood Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Soil
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
5.5%30.0%24.0%6.9%8.3%5.5%4.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
OU_022285602124908016MGAVVWAETPDDERDEATETETHGGVDETFASRRLRRWLKGMFGGGRAVDRPPEDEQER
AL20A1W_110259723300000880PermafrostMVAVVWAETPEDDRDDASETEAHGKVDETFASRRLRRWLKGMFGGGQVAEKPAEEEQER*
AL3A1W_104231713300000886PermafrostVAVVWAETPEDDRDDASETEAHGKVDETFASRRLRRWLKGMFGGGQVAEKPAEEEQER*
JGI10216J12902_10593125243300000956SoilMGAVVWAEAPEDDADETETEAPGEVDQTFASRKLRRWLKGMFGGGPTTKPPDDEQER*
A30PFW6_114317633300001361PermafrostMCAVLWAETPDDDREEGADTEAHGGVDETFASRRLKRWLRGMFGGSAPEKPTEDEQER*
Ga0062593_10080584423300004114SoilMGAVVWAEAPEDEGDDAETEAHGEVDKTFASRKLKRWLKGMFGGGPASAKPADDEQER*
Ga0062593_10182133523300004114SoilMGGVVWAEAPEDEGDEAETEAHGEVDKTFASRKLRRWLKGMFGGGPASAKPTDDDEQER*
Ga0062590_10266968123300004157SoilMGGVVWAEAPEDEGDDAETEAHGEVDKTFASRKLKRWLKGMFGGDPASAKQADDEQER*
Ga0062595_10027817523300004479SoilMGAVVWAETPEDEGGDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAKPAEDQQER*
Ga0066677_1074559723300005171SoilMGAVVWAESSDDDRVEPAETEAHGEVDETFASRRLRRWLRGMFGGGQALEKPPEDERES*
Ga0066683_1023154623300005172SoilMGAVVWAETPDDDRAEAADTEAHGEVDETFASRRLRRWLRGMFGGGQATEKPPEDEQER*
Ga0066679_1047236213300005176SoilMGAVVWAETPDDEHDEATEPETHGGVDETFASRRLRRWLKGMFGGGQAVEKPPDNEQER*
Ga0066678_1022075723300005181SoilMGAVVWAESSDDDRDEPADTEAHGEVDETFASRRLRRWLRGMFGGGQALEKPPEDERES*
Ga0066678_1030279423300005181SoilMGAVVWAETPDNEDDEATEPETHGGVDETFASRRLRRWLKGMFGGGQKVEKPPDDEQER*
Ga0066678_1047703833300005181SoilWAEAPDDDGGETADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKTPEDEEEP*
Ga0070690_10108933623300005330Switchgrass RhizosphereMGGVVWAEAPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPGSVKPGDDEQER*
Ga0068869_10075904323300005334Miscanthus RhizosphereMGAVVWAEAPDDDLDEETEAHGKVDETFASRRLRRWLEGMFGGSAATERPPEDEQQR*
Ga0070708_10001528533300005445Corn, Switchgrass And Miscanthus RhizosphereMGAVVWAETPDEERDGAIEPEPHGGVDETFASRRLRRWLKGMFGGGQAVEKPADEQDR*
Ga0070678_10234416623300005456Miscanthus RhizosphereMGAVVWAEAPDDDRDEETEAHGKVDETFASRRLRRWLEGMFGGGPATEKPPEDEQQR*
Ga0070706_10000140183300005467Corn, Switchgrass And Miscanthus RhizosphereMGAVVWAETPDEEQDGAIEPETHGGVDETFASRRLRRWLKGMFGGGQAVEKPADDEQER*
Ga0070707_100001815143300005468Corn, Switchgrass And Miscanthus RhizosphereMGAVVWAETPDEEQDGAIEPETHGGVDETFASRRLRRWLKGMFGGGQAVEKPADDEQEH*
Ga0070699_10003338843300005518Corn, Switchgrass And Miscanthus RhizosphereMGAVVWAEAPDDNEGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQTPPEDEQER*
Ga0070697_10039566523300005536Corn, Switchgrass And Miscanthus RhizosphereMGAVVWAETPDDERDEATEPETHGGVDETFASRRLRRWLKGMFGGGQPVDKPPDGDQEG*
Ga0066697_1040062823300005540SoilMGAVVWAEAPDDDGGETADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEEER*
Ga0070696_10161936813300005546Corn, Switchgrass And Miscanthus RhizosphereMGAVVWAETPEDEGDDAETEAHGEVDKTFASRKLKRWLKGMFGGGPASAKPADDDEQER*
Ga0070704_10089471313300005549Corn, Switchgrass And Miscanthus RhizosphereWAEAPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAKPADDEQER*
Ga0066701_1090082323300005552SoilMGAVVWAESSDDDRVEPAETEAHGEVDETFASRRLRRWLRGMFGGGHALEKPPEDERES*
Ga0066707_1057557813300005556SoilMGAVVWAETPDDEHDEAIEPETHGGVDETFASRRLRRWLKGMFGGGQAVEKPPDDEQER*
Ga0066698_1103057923300005558SoilMGAVVWAETPDDDGGETADTEAHGKVDETFASRRLRRWLRGMFGGGQAVQKPPEDEEER*
Ga0066703_1063219323300005568SoilMGAVVWAESSDDDRDESAETEAHGDVDETFASRRLRRWLRGMFGGGKALEKPPEDEREP*
Ga0066708_1097960113300005576SoilMGAVVWAEAPDDDGGETADTEAHGKVDETFASRRLRRWLRGMFGGGQAVQKPPEDEEER*
Ga0066652_10031627733300006046SoilMGAVVWAEAPEDDGENAEKEAPGEVDETFASRKLRRWLKGMFGGGQASTKPPDEQES*
Ga0066653_1062395513300006791SoilMGSVVWAEAPEDDGEDAEKEAPGEVDETFASRKLRRWLKGMFGGGQASTKPPDEQES*
Ga0066665_1033338923300006796SoilMGAVVWAETPDDEHDEAIEHETHGGVDETFASRRLRRWLKGMFGGGQAVEKPPDDEQER*
Ga0074063_1364944213300006953SoilMGAVVWADAPDGEHDKETEAHGKVDETFASRRLRRWLEGMFGGGSAKEKPAEDELQR*
Ga0099793_1009950523300007258Vadose Zone SoilMGAVVWAESSDDDRDEPAETEAHGDVDETFASRRLRRWLRGMFGGGQALEKPPEDEREP*
Ga0099794_1079116023300007265Vadose Zone SoilMGAVVWAESSDDERDEAADTEAHGEVDETFASRRLRRWLRGMFGGGQALEKPPEDEREP*
Ga0066710_10000993573300009012Grasslands SoilMGAVVWAESSDDDRVEPAETEAHGEVDETFASRRLRRWLRGMFGGGHALEKPPEDERES
Ga0066710_10029212823300009012Grasslands SoilMGAVVWAETPEDENDDALDLEAHGKVDETFASRRLRRWLEGMFGGGAATETPLEEEQER
Ga0066710_10057613713300009012Grasslands SoilMGAVVWAETPDDDGGEADDTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEEER
Ga0066710_10077739423300009012Grasslands SoilMGAVLWAEAPDDNEGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQPVQKPPEDERER
Ga0099829_1014973123300009038Vadose Zone SoilMGAVVWAETPDEERDEATETETHGGVDETFASRRLRRWLKGMFGGGQAGEKPPDDEQEH*
Ga0099829_1023130623300009038Vadose Zone SoilMCAVVWAETPDDDRDEAADTEAHGAVDETLASRRLKRWLRGMFGGPAPAKPDEDEQER*
Ga0099830_1021333823300009088Vadose Zone SoilMGAVVWAETPDEERDEATETETHGGVDETFASRRLRRWLKGMFGGGQPVEKPPGDEQEH*
Ga0099828_1125441313300009089Vadose Zone SoilMGALVWAETPDDKSSEAAETQAHGGVDETFAARRLRRWLKGMFGGGPALEKPPEDER*
Ga0099827_1004546323300009090Vadose Zone SoilMGAVVWAETPEDEKDDALDLEAHGKVDETFASRRLRRWLKGMFGGGAATEKPPEDEQER*
Ga0099827_1112005023300009090Vadose Zone SoilMGAVVWAETPDDDRDEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER*
Ga0066709_10070482433300009137Grasslands SoilMRAVVWAEAPDDDGGETADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKTPEDEEEP*
Ga0066709_10269438613300009137Grasslands SoilMGAVVWAETPEDDKDDALEMEAHGKVDETFASRKLRRWLKGMFGGGAATETPPEDEQER*
Ga0066709_10345673323300009137Grasslands SoilMGAVLWAEAPDDNEGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQPVQKPPEDERER*
Ga0066709_10385287023300009137Grasslands SoilMGAVVWAETPDDDGGEADDTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEEER*
Ga0126307_1076922033300009789Serpentine SoilMGAVVWADASDDEQNEPGETEAHGGLDETFAERRLRRWIRAMFGGHQDVPDEQSDRDEP*
Ga0126309_1106761413300010039Serpentine SoilMGAVVWADAPEDEGGDAETEAHGEVDKTFASRKLRRWLKGMFGGDPASAKPTDDEQER*
Ga0134082_1045297023300010303Grasslands SoilMGAVMWAESSDDDRDESAETEAHGDVDETFASRRLRRWLRGMFGGGKALEKPPEDEREP*
Ga0134062_1048199923300010337Grasslands SoilMGAVVWAETPDDEHDGAIEPETHGGVDETFASRRLRRWLKGMFGGGQAVEKPPDDE
Ga0134125_1113007923300010371Terrestrial SoilMGAVVWAETPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPTSAKPADDEQER*
Ga0134126_1266143223300010396Terrestrial SoilMGAVVWAETPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPTSAKPADDEPER*
Ga0134122_1233332023300010400Terrestrial SoilMGAVVWAETPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAKPADDEQER*
Ga0138514_10005564123300011003SoilMGGVVWAEAPDDNEGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQEPPEDEQER*
Ga0120157_108260323300011994PermafrostMCAVLWAETPDDDREETADTEAHGGVDETFASRRLKRWLRGMFGGSAPEKPTEDEQER*
Ga0120167_112177613300012001PermafrostFWAEAPEDEGDEAETEAHGEVDKTFASRKLRRWLRGMFGGGEGIKPPPEGEQER*
Ga0120118_108525423300012010PermafrostMCAVLWAETPDDDREEAADTEAHGGVDETFASRRLKRWLRGMFGGSAPEKPTEDEQER*
Ga0120152_109179323300012011PermafrostMGAVFWAEVPEDEGDEAETEAHGEVDETFASRKLRRWLKGMFGGGQGSEPPPEDGQER*
Ga0120159_103034723300012014PermafrostMGSVLWAEAPEDEGDEAETEAHGEVDETFASRKLRRWLKGMFGGGPASAKPPDDEQER*
Ga0120139_109454623300012019PermafrostMCAVVWAETPDDDREEAADTEAHGGVDETFASRRLKRWLRGMFGGSAPEKPTEDEQER*
Ga0137389_1032792213300012096Vadose Zone SoilMGALVWAETPDDKSSEAAETQAHGGVDETFAARRLRRWLKGMFGGGPAVEKPPTDEHEG*
Ga0137388_1086761123300012189Vadose Zone SoilMGALVWAETPDDKSSEAAETQAHGGVDETFAARRLRRWLKGMFGGGPAVEKPPADEHEG*
Ga0137364_1017820123300012198Vadose Zone SoilMGAVVWAEAPDDNDGEAADTEAHGEVDETFASRRLRRWLRGMFGGGEAVQKPPEDEQER*
Ga0137364_1045356713300012198Vadose Zone SoilRRERVERMGAVVWAETPDDEHDEAIEPETHGGVDETFASRRLRRWLKGMFGGGQAVEKPPDDEQER*
Ga0137383_1022397923300012199Vadose Zone SoilMCAVVWAETPDDGREEAADTEAHGEVDETFASRRLKRWLRGMFGGGQAAEKPPEDEQDR*
Ga0137382_1002131623300012200Vadose Zone SoilMGAVVWAESSDDDRDESAETEAHGDVDETFASRRLRRWLRGMFGGGQVLEKPPEDKREP*
Ga0137382_1047368123300012200Vadose Zone SoilMGAVVWAEAPDDDRDEGPDTEAHGGVDESFASRRLRRWLRGMFGGGQGPEKPPEDEQQH*
Ga0137365_1000265753300012201Vadose Zone SoilMGAVVWAETPDDDGGEADDTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER*
Ga0137365_1001487133300012201Vadose Zone SoilMGAVVWAETPDDERDEAADTEVHGEIDETFASRRLRRWLRGMFGGGQAVQKPPEDEEER*
Ga0137399_1001744543300012203Vadose Zone SoilMGAVVWAESSDDDRDEPAETEAHGDVDETFASRRLRRWLRGMFGGGQALEKSPEDEREP*
Ga0137374_1000030953300012204Vadose Zone SoilMGAVFWAEAPEDDADEAETEAPGEVDATFASRKLRRWLKGMFGGGPASTKPPDEQER*
Ga0137380_1001485513300012206Vadose Zone SoilMGAVVWAETPEDEKDDALDLEAHGKVDETFASRRLRRWLKGMFGGGAATETPPEDE*
Ga0137380_1045696813300012206Vadose Zone SoilKGGSMGAVVWAEAPDDDGGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER*
Ga0137381_1039492923300012207Vadose Zone SoilMGAVVWAETPEDENDDGLDLEAHGKVDETFASRRLRRWLKGMFGGGAATETPPEDEQER*
Ga0137376_1013203633300012208Vadose Zone SoilVGVVVWAETPEDDKDDALETEAHGEVDETFASRKLRRWLKGMFGGGATTETPPEDEQEH*
Ga0137376_1032245733300012208Vadose Zone SoilMGAVVWAEASDDDGGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER*
Ga0137376_1138344813300012208Vadose Zone SoilESSDDDRVEPAETEAHGEVDETFASRRLRRWLRGMFGGGHALEKPPEDERES*
Ga0137376_1161680513300012208Vadose Zone SoilMGAVFWAEAPEDNGDEAETEAHGEVDETFASRKLRRWLKGMFGGPTPTKPPDDEQER*
Ga0137379_1018338033300012209Vadose Zone SoilMGAVVWAETPEDENDDALDLEAHGKVDETFASRRLRRWLKGMFGGGAATETPPEDEQER*
Ga0137379_1056936213300012209Vadose Zone SoilMGAVVWAETPDDERDEAADTEVHGEIDETFASRRLRRWLRGMFGGGHALEKPPEDERES*
Ga0137377_1175402123300012211Vadose Zone SoilMGAVVWAETPDDEHDEATEPETRGGVDETFASRRLRRWLKGMFGGGQAVEKPPDDEQER*
Ga0137370_1077058213300012285Vadose Zone SoilMGAVVWAEAPDDNDGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER*
Ga0137387_1016377223300012349Vadose Zone SoilMGAVVWAETPEDEKDDALDLEAHGKVDETFASRRLRRWLKGMFGGGAATETPPEDEQER*
Ga0137372_1028619523300012350Vadose Zone SoilMGAVVWAETPEDENDDALDLEAHGKVDETFASRRLRRWLKGMFGGGAATETPPEDE*
Ga0137386_1016785323300012351Vadose Zone SoilMGAVVWAETPEDENDDALDLEAHGKVDETFASRRLRRWLEGMFGGGAPTETPPEDE*
Ga0137385_1057911013300012359Vadose Zone SoilPPIEALRNALVIAPPPCKGGGMCAVVWAETPDDGREEAADTEAHGEVDETFASRRLKRWLRGMFGGGQAAEKPPEDEQDR*
Ga0137373_1045134523300012532Vadose Zone SoilMGAVFWAEAPEDDADEAETEAPGEVDATFASRKLRRWLKGMFGGKPAPKDEPEREPEE*
Ga0137397_1025479713300012685Vadose Zone SoilMGAVLWAESSDDDRDEPAETEAHGDVDETFASRRLRRWLRGMFGGGQVLEKRP
Ga0157285_1014164133300012897SoilMGGVVWAEAPEDEGDDAETEAHGEVDETFASRKLRRCLKGMFGGGPGSAKPADDEQER*
Ga0157283_1023071723300012907SoilMGGVVWAEAPEDEGDDAETEAHGEVDKTFASRKLRRWLKGMFGGGPASAKPTDDDEQER*
Ga0137394_1043631323300012922Vadose Zone SoilMGGVVWAEAPEDDADEAETEAHGGVDETFASRKLGRWLKGMFGGGPATTEPPDAEQER*
Ga0137416_1064458113300012927Vadose Zone SoilMGAVVWAESSDDDRDEAADTEAHGEVDETFASRRLRRWLRGMFGGGQALEKPPEDEREP*
Ga0137404_1024488323300012929Vadose Zone SoilMSGVVWAEASDDDGGDDADTEAHGEVDETFASRRLRRWLRGMFGGGQGLQRPPEDEEER*
Ga0137404_1052944133300012929Vadose Zone SoilWAEAPDDDGGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER*
Ga0137404_1180477023300012929Vadose Zone SoilMGGVVWAEAPEDDADETETEAHGAVDETFASRKLRRWLKGMFGGGPVTTEPPDAEQER*
Ga0137404_1198093123300012929Vadose Zone SoilMGGVVWAEAPDDDGGEAPETEAHGGVDETFASRRLRRWLRGMFGGGQAVQKPPED
Ga0137407_1019351213300012930Vadose Zone SoilMGAVVWAETPDDDGGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER*
Ga0137407_1056193623300012930Vadose Zone SoilMGAVVWAEAPDDDGGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER*
Ga0137407_1243940623300012930Vadose Zone SoilMGAVVWAETPDDERDEAADTEVHGEVDETFASRRLRRWLRGMFGGGQA
Ga0137410_1008355623300012944Vadose Zone SoilMGAVVWAESSDDDRDEPAETEAHGDVDETFASRRLRRWLRGMFGGGQALEKRPEDEREP*
Ga0164298_1056109113300012955SoilMGAVVWAEAPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAKPADDEQER*
Ga0164301_1006995023300012960SoilMGAVFWADAPDDERDEETEAHGKGDETFASRRLRRWLKGMFGGGTAPEKPPEDEQGR*
Ga0164301_1026260523300012960SoilMAAVVWAETPEDDQGEAAETEAHGTVDESFASRRLRRWLKGMFGGGPGVEKPPEDEQER*
Ga0164301_1074865723300012960SoilMGGVVWAEAPEDEGDDAETEAHGEVDKTFASRKLRRWLKGMFGGEPASAKRADDEQER*
Ga0164302_1050465223300012961SoilMGGVVWAEAPEDEGDDAQTEAHGEVDKTFASRKLRRWLKGMFGGEPASAKRADDEQER*
Ga0164302_1051145823300012961SoilMGAVFWADAPDDERDEEKEAHGKVDETFASRRLRRWLKGMFGGGTAPEKPPEDEQRR*
Ga0164308_1037493023300012985SoilMGAVVWADAPDDERDEETEAHGKVDETFASRRLRRWLKGMFGGGTAPEKPPEDEQRR*
Ga0164305_1016374433300012989SoilMGGVVWAEAPKDEGDEAETEAHGEVDKTFASRKLRRWLKGMFGGEPASAKRADDEQER*
Ga0120155_100292653300013768PermafrostMGAVFWAEAPEDEGDEAETEAHGEVDKTFASRKLRRWLRGMFGGGEGIKPPPEGEQER*
Ga0120123_106877913300013770PermafrostMCAVLWAETPDDEREDAADTEAHGGVDETFASRRLKRWLRGMFGGSAPEKPTE
Ga0120123_108104733300013770PermafrostMCAVVWAETPDDDREEAADTEAHGGVDETFASRRLKRWLRGMFGGPAPAKPDEDEQER*
Ga0120123_112224413300013770PermafrostAAPCKGQRMDAAVWAKTPEDDKDDALEIEAHGKVDETFASRKLRRWLKGMFGGGAATETPAEDEQER*
Ga0120109_102946433300014052PermafrostMCAVVWAETPDDDREEAADTEAHGGGDVTFASRRLKRWLRGMFGGSAPEKPTEDEQER*
Ga0120125_119416013300014056PermafrostMGAVFWAEVPEDEGDEAETEAHGEVDETFASRKLRRWLKGMFGGGQVAEKPAEEEQER*
Ga0157380_1057021033300014326Switchgrass RhizosphereKGCPMGAVVWAEAPDDDLDEETEAHGKVDETFASRRLRRWLEGMFGGSAATERPPEDEQQR*
Ga0167629_104528023300015209Glacier Forefield SoilMGGVVWAEAPEGDGDDTAETEAHGEVDETFASRRLKRWLKGMFGGGSATETPAEDEPER*
Ga0134089_1031285223300015358Grasslands SoilMGAVVGAETPDDDRAEAADTEAHSEVDETFASRRLRRWLRGMFGGGQATEKPPEDEQER*
Ga0184610_126053423300017997Groundwater SedimentMGAVVWAEAPDDDRDEAADTEAHGGVDETFASRRLRRWLRGMFGGGQVVEKPPPEDEREP
Ga0184604_1032828123300018000Groundwater SedimentVVWAETPEDEGDDAETEVHGEVDKTFASRKLKRWLKGMFGGGPASAKPADDEQER
Ga0184605_1015730623300018027Groundwater SedimentMGAVFWAEAPEDDADEAETEAHGEVDETFASRKLRRWLKGIFGGGPASAQPADDEQER
Ga0184605_1020139023300018027Groundwater SedimentMGAVVWAEASDDDGGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER
Ga0184605_1024197933300018027Groundwater SedimentVGVVVWAETPEDDKDDALEIEAHGEVDETFASRKLRRWLKGMFGGGAATETPPEDEQER
Ga0184608_1000958043300018028Groundwater SedimentMGAVVWAEAPDDDRDEAADTEAHGGVDETFASRRLRRWLRGMFGGGQVVEKPPPEHEREP
Ga0184608_1026363723300018028Groundwater SedimentMGAVVWAEAPEDEGDDAETEAHGEVDETFASRKLRRWLKGTFGGGQASTKPPDEQER
Ga0184619_1003480043300018061Groundwater SedimentMGAVFWAEAPEDNGDEAETEAHGEVDETFASRKLRRWLKGMFGGGQASTKPPDEQER
Ga0184619_1024515523300018061Groundwater SedimentMGAVVWAEAPEDEGDEAETEAHGEVDETFASRKLRRWLKGMFGGGAASAKPPDDEQDR
Ga0184618_1008297813300018071Groundwater SedimentMGAVFWAEAPEDDGDEAETEAQGEVDETFASRKLRRWLKGMFGGRPAPTKTPDDDQR
Ga0184618_1027020613300018071Groundwater SedimentMGAVFWAEAPEDEGDEAETEAHGEVDKTFASRKLKRWLKGMFGGGPASTKPSDDEQER
Ga0184609_1025070423300018076Groundwater SedimentMGAVFWAEAPEDDGEDAEAEAPGEVDETFASRKLRRWLKGMFGGGPAPTKTPDDDQR
Ga0066655_1015677733300018431Grasslands SoilMGAVVWAESSDDDRDESAETEAHGDVDETFASRRLRRWLRGMFGGGKALEKPPEEEREP
Ga0066667_1085776023300018433Grasslands SoilMGAVVWAESSDDDRDESAETEAHGDVDETFASRRLRRWLKGMFGGGQALEKPPEDERES
Ga0066669_1200090923300018482Grasslands SoilMGAVVWAETPDDEHDEAIEPETHGGVDETFASRRLRRWLKGMFGGGQAVEKPPDDEQER
Ga0184643_102822733300019255Groundwater SedimentWAEAPDDDRDEAADTEAHGGVDETFASRRLRRWLRGMFGGGQVVEKPPPEDEREP
Ga0184643_126218623300019255Groundwater SedimentMGAVVWAEAPDDNEGEAADTEAHGKVDETFASRRLRRWLRGMFGGGQAVQKAPEDEQER
Ga0184642_162563923300019279Groundwater SedimentMGAVFWAEAPEDDGDEAETEAQGEVDETFASRKLRRWLKGMFGGGPAPTKTPDDDQR
Ga0173482_1077104223300019361SoilMGGVVWAEAPEDEGDEAETEAHGEVDKTFASRKLRRWLKGMFGGGPASAKPTDDDEQER
Ga0193705_102282433300019869SoilMGAVVWAETPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAQPADDEQER
Ga0193701_101299323300019875SoilMGAVVWAETPEGEGDDAETEAHGEVDKTFASRKLRRWLKGMFGGGQGSTQPADDERES
Ga0193701_106408223300019875SoilMGAVVWAETPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPTSAQPADDEQER
Ga0193729_1000014163300019887SoilMCAVLWAETPDDDREEAAADTEAHGGVDETFASRRLKRWLRGMFGGPAPEKPTEDEQER
Ga0193751_127017513300019888SoilMCAVLWAETPDDDRDEAAETEAHGEVDETFATRRLSRWLRGMFGGGRAPAKQPEDEQER
Ga0193730_101441033300020002SoilTSPCKGGSMGAVVWAEAPDDNEGEAADTEAHGEVDETFASRRVRRWLRGMFGGGQAVQKAPEDEQER
Ga0193721_107820523300020018SoilMGAVVWAEAPDDNEGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER
Ga0210382_1007451023300021080Groundwater SedimentMGAVFWAEAPEGDGDEAETEAHGEIDETFASRKLRRWLKGMFGGGPASTKPLDDEQER
Ga0193719_1019417713300021344SoilMGAVVWAETPEDERDDAETEAHGEVDKTFASRKLRRWLKGMFGGGQGSTQPADDERES
Ga0193695_100183523300021418SoilMGAVVWAEAPDDNEGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPDDEQER
Ga0193695_113211423300021418SoilMGAVVWAEASDDDGGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQTPPEDEQER
Ga0222623_1042293213300022694Groundwater SedimentMGAVVWAEAPEDDGEDAETEAPGEVDETFASRKLRRWLKGMFGGGQASTKPPDEQER
Ga0222622_1020006333300022756Groundwater SedimentMGAVVWAEAPEDEGDDAETEAHGEVDKTFASRKLKRWLKGMFGGGPASAKPADDEQER
Ga0207684_1000693883300025910Corn, Switchgrass And Miscanthus RhizosphereMGAVVWAETPDEEQDGAIEPETHGGVDETFASRRLRRWLKGMFGGGQAVEKPADDEQER
Ga0207662_1008131633300025918Switchgrass RhizosphereMGAVVWAEAPDDDLDEETEAHGKVDETFASRRLRRWLEGMFGGSAATERPPEDEQQR
Ga0207646_1001034273300025922Corn, Switchgrass And Miscanthus RhizosphereMGAVVWAETPDEEQDGAIEPETHGGVDETFASRRLRRWLKGMFGGGQAVEKPADDEQEH
Ga0207665_1084987923300025939Corn, Switchgrass And Miscanthus RhizosphereMGAVVWAETPDDEREESAEPETHGGVDETFASRRLRRWLKGMFGGGQAVEKPPDDVQER
Ga0207651_1132913413300025960Switchgrass RhizosphereMGAVVWAEAPDDDLDEETEAHGKVDETFASRRLRRWLEGMFGGSAATERPPEDE
Ga0207683_1031304633300026121Miscanthus RhizosphereMGAVVWAEAPDDDLDEETEAHGKVDETFASRRLRRWLEGMFGGGPATEKPPEDEQQR
Ga0209234_103947923300026295Grasslands SoilMGAVVWAESSDDDRDESAETEAHGDVDETFASRRLRRWLKGMFGGGQALEKPPEDEREP
Ga0209801_100671953300026326SoilMGAVVWAESSDDDRDEPADTEAHGEVDETFASRRLRRWLRGMFGGGQALEKPPEDERES
Ga0209803_110353823300026332SoilMGAVVWAESSDDDRDEPADTEAHGEVDETFASRRLRRWLRGMFGGGQALEKPPE
Ga0207511_10514223300026802SoilMGAVVWAETPEDEGGDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAKPAEDQQER
Ga0209689_110496723300027748SoilMGAVVWAESSDDDRDEPADTEAHGEVDETFASRRLRRWLRGMFGGGHALEKPPEDERES
Ga0209180_1012937523300027846Vadose Zone SoilMGAVVWAETPDEERDEATETETHGGVDETFASRRLRRWLKGMFGGGQAGEKPPDDEQEH
Ga0209180_1033393823300027846Vadose Zone SoilMCAVVWAETPDDDRDEAADTEAHGAVDETLASRRLKRWLRGMFGGPAPAKPDEDEQER
Ga0209283_1085748613300027875Vadose Zone SoilMGALVWAETPDDESSEAAETQAHGRVDETFAARRLRRWLQGMFGGDPAV
Ga0209590_1000823833300027882Vadose Zone SoilMGAVVWAETPEDEKDDALDLEAHGKVDETFASRRLRRWLKGMFGGGAATEKPPEDEQER
Ga0209590_1019509423300027882Vadose Zone SoilMCAVVWAETPDDERDGAADTEAHGEVDETFASRRLKRWLLGMFGGGQTPAKPPPEDEQER
Ga0137415_1064701723300028536Vadose Zone SoilMGAVVWAESSDDDRDEPADTEAHGEVDETFASRRLRRWLRGMFGGGQALEKPPEDEREP
Ga0307276_1004350023300028705SoilMGAVVWAETPEDEGDEAETEAHGEVDKTFASRKLRRWLKGMFGGGPASAKPTDDEQER
Ga0307276_1010776423300028705SoilVGVVVWAETPEDDKDDALEIEAHGEVDETFASRKLRRWIKGMFGGGAATETPPEDEQER
Ga0307295_1015649323300028708SoilMGAVVWAETPEDEGDDAETEAHGEVDKTFASRKLKRWLKGMFGGGPAPAKPADDEQER
Ga0307293_1011838123300028711SoilMGAVVWAEAPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPTSAQPADDEQER
Ga0307313_1008268623300028715SoilMGAVVWAETPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAQPADDERER
Ga0307311_1000750023300028716SoilMAAVVWAEAPDDNEGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER
Ga0307298_1001769743300028717SoilCSMGAVVWAETPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAQPADDEQER
Ga0307301_1005261433300028719SoilDDDRDEAADTEAHGGVDETFASRRLRRWLRGMFGGGQVVEKPPPEDEREP
Ga0307301_1019049223300028719SoilMGAVFWAEAPEDEGDEAETEAHGEVDETFASRKLRRWLKGMFGGGAASAKPPDDEQDR
Ga0307317_1001119013300028720SoilVWAEAPDDDRDEAADTEAHGGVDETFASRRLRRWLRGMFGGGQVVEKPPPEDEREP
Ga0307317_1005451223300028720SoilMGAVVWAEAPDDDRDEAADTEAHGGVDETFASRRLRRWLRGMFGGGQVVEKPPPEDERE
Ga0307319_1010954823300028722SoilMGAVVWADAPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAKPADDEQER
Ga0307318_1017488933300028744SoilMGAVVWADAPEDEGDDAETEAHGEVDKTFASRKLKRWLKGMFGGGPAPAKPADDEQER
Ga0307316_1004636343300028755SoilKGGRMGAVVWAEAPDDDRDEAADTEAHGGVDETFASRRLRRWLRGMFGGGQVVEKPPPEDEREP
Ga0307316_1013776623300028755SoilMGAVVWAEAPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAQPADDEQER
Ga0307316_1039094313300028755SoilIPARPCKGCSMGAVFWAEAPEDDSDESETEAHGEVDETFASRRLRRWLKGMFGGEPASAKPADDERER
Ga0307320_1007732013300028771SoilMGAVVWADAPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAKPTDDEQER
Ga0307320_1010072613300028771SoilMGAVVWAEAPDDDRDEAADTEAHGGVDETFASRRLRRWLRGMFGGGQVVE
Ga0307282_1032936723300028784SoilMGAVVWAEAPEDEGDDAETEAHGEVDKTFASRKLKRWLKGMFGGGPAPAK
Ga0307323_1013444213300028787SoilVWAETPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAQPADDEQER
Ga0307290_1000778413300028791SoilDRDEAADTEAHGGVDETFASRRLRRWLRGMFGGGQVVEKPPPEDEREP
Ga0307299_1032364813300028793SoilAVWAKTPDDKDDASEIEAHGKVDETFASRKLRRWLKGMFGGGAATETPAEDEQEH
Ga0307503_1054486623300028802SoilMGAVVWADAPDDERDEETEAHGKVDETFASRRLRRWLEGMFGGGPATEKPPE
Ga0307294_1022186813300028810SoilMGAVVWAETPEDEGDEAETEAHGEVDKTFASRKLRRWLKGMFGGGPTSAQPADDEQER
Ga0307302_1009314623300028814SoilMGAVFWAEAPEDEGDEAETEAHGEVDETFASRKLRRWLKGMFGGGAASTKPPDDEQDR
Ga0307296_1005128913300028819SoilMGAVVWAEAPEDEGDEAETEAHGEVDETFASRKLRRWLKGMFGGGPASAKPPDDEQER
Ga0307296_1044661413300028819SoilMAAVVWAEAPDDNEGEAADTEAHGEVDETFASRRLRRWLRGMFGGGEAVQKPPEDEQER
Ga0307310_1000801123300028824SoilMGAVVWAETPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPTSAQPADDERES
Ga0307310_1001676113300028824SoilVVWAEAPDDDRDEAADTEAHGGVDETFASRRLRRWLRGMFGGGQVVEKPPPEDEREP
Ga0307310_1013421523300028824SoilMGAVVWAEAPEDDGEDAETEAPGKVDETFASRKLRRWLKGMFGGGQASAKPPDEQER
Ga0307312_1066058723300028828SoilMCAVVWADAPDDDPDAEMEAHGKVDETFASRRLRRWLEGMFGGGPATEKPPDDEQQR
Ga0307278_10000016913300028878SoilMAAVVWAEAPDDNEGETADTEAHGEVDETFASRRLRRWLRGMFGCGQAVQKPPEDEQER
Ga0307278_1019284933300028878SoilKGGRMGAVVWAEAPDDDRDEAADTEAHGGVDETFASRRLRRWLRGMFGGGQVAEKPPPEDEREP
Ga0307277_1000507823300028881SoilMGAVVWAEAPDDSEGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKPPEDEQER
Ga0307308_1006803513300028884SoilGCPMEAVVWAEAPEDDRDEAETEAHGKVDETFASRKLRRWLKGMFGGSPATVKPPDDEES
Ga0307308_1043754923300028884SoilMGGVVWAEAPDDDEGEAADTEAHGEVDETFASRRLRRWLRGMFGGGQAVQKAPEDEQER
Ga0307304_1029608423300028885SoilMGAVVWAETPEDDRDKETEAHGKVDETFASRRLRRWLTGMFGGGPAAEKPPEDEEQR
Ga0308189_1033222023300031058SoilMGAVVWAETPEDEGDDAETEAHGEVDKTFASRKLRRWLKGMFGGGPTSAQPADDEQER
Ga0308201_1024672523300031091SoilMGAVVWAEAPEDEGDDAETEAHGEVDKTFASRKLRRWLKGMFGGGPTSAQPADDEQER
Ga0308187_1042246813300031114SoilLEGAKFDPIGYAEDEGDEAETEAHGEVDETFASRKLRRWLKGMFGGGAASAKPPDDEQDR
Ga0308182_101880213300031125SoilAEAPDDDRDEAADTEAHGGVDETFASRRLRRWLRGMFGGGQVVEKPPPEDEREP
Ga0307495_1019079923300031199SoilMGAVVWAEAPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPASAKPAEDEQER
Ga0307497_1005545033300031226SoilMGAVVWADAPDDERDEETEAHGKVDETFASRRLRRWLEGMFGGGPATEKPPEDEQQR
Ga0308194_1008268213300031421SoilETPEDEGDDAETEAHGEVDETFASRKLRRWLKGMFGGGPTSAQPADDEQER
Ga0307469_1100441633300031720Hardwood Forest SoilVAVTWAEASDDHDEASETEAHGEVDETFASRRLRRWLRGMFGGGGQHPPDPPERDSERD
Ga0307468_10021385823300031740Hardwood Forest SoilVAVTWAEASDDHDEASETEAHGEVDETFASRRLRRWLRGMFGGGQHPPDPPERDSERD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.