Metagenome / Metatranscriptome Family F024169

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F024169
Family Type	Metagenome / Metatranscriptome
Number of Sequences	207
Average Sequence Length	41 residues
Representative Sequence	MNTEKFEGDHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Number of Associated Samples	113
Number of Associated Scaffolds	207

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	45.41 %
% of genes near scaffold ends (potentially truncated)	58.45 %
% of genes from short scaffolds (< 2000 bps)	78.74 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.150 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.188 % of family members)
Environment Ontology (ENVO)	Unclassified (37.681 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.217 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.29% β-sheet: 0.00% Coil/Unstructured: 55.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 207 Family Scaffolds
PF04226	Transgly_assoc	2.90
PF03401	TctC	1.45
PF04392	ABC_sub_bind	1.45
PF07813	LTXXQ	1.45
PF13356	Arm-DNA-bind_3	0.97
PF00196	GerE	0.97
PF07681	DoxX	0.97
PF00005	ABC_tran	0.97
PF02518	HATPase_c	0.97
PF03411	Peptidase_M74	0.97
PF00106	adh_short	0.48
PF04536	TPM_phosphatase	0.48
PF00496	SBP_bac_5	0.48
PF05378	Hydant_A_N	0.48
PF06186	DUF992	0.48
PF05239	PRC	0.48
PF12071	DUF3551	0.48
PF05598	DUF772	0.48
PF00375	SDF	0.48
PF02163	Peptidase_M50	0.48
PF01402	RHH_1	0.48
PF00596	Aldolase_II	0.48
PF02586	SRAP	0.48
PF09361	Phasin_2	0.48
PF00313	CSD	0.48
PF00239	Resolvase	0.48
PF02776	TPP_enzyme_N	0.48
PF04174	CP_ATPgrasp_1	0.48
PF02796	HTH_7	0.48
PF05099	TerB	0.48
PF05036	SPOR	0.48
PF02530	Porin_2	0.48
PF00291	PALP	0.48
PF13442	Cytochrome_CBB3	0.48
PF01527	HTH_Tnp_1	0.48
PF00216	Bac_DNA_binding	0.48
PF03450	CO_deh_flav_C	0.48
PF00536	SAM_1	0.48

COG ID	Name	Functional Category	% Frequency in 207 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	5.80
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	2.90
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.45
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.45
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	0.97
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.97
COG3770	Murein endopeptidase MepA (D-alanyl-D-alanine-endopeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.97
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.97
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.48
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.48
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.48
COG2308	Circularly permuted ATP-grasp protein	General function prediction only [R]	0.48
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.48
COG3637	Opacity protein LomR and related surface antigens	Cell wall/membrane/envelope biogenesis [M]	0.48
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	0.48

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
All Organisms	root	All Organisms	32.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
cellular organisms	root	All Organisms → cellular organisms	32.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.14 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.90 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.90 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.48 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.48 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.45 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.48 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.48 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.90 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.48 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.48 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.48 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.15 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.90 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.48 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.48 %
Bradyrhizobium sp. ORS 375	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ORS 375	0.48 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.48 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.48 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1062432	Not Available	548	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1003031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2711	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1022113	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10001570	All Organisms → cellular organisms → Bacteria	5883	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10083950	Not Available	679	Open in IMG/M
3300001867\|JGI12627J18819_10193256	Not Available	822	Open in IMG/M
3300003505\|JGIcombinedJ51221_10349016	Not Available	602	Open in IMG/M
3300004152\|Ga0062386_100694511	Not Available	835	Open in IMG/M
3300004633\|Ga0066395_10213619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1016	Open in IMG/M
3300004633\|Ga0066395_10319872	Not Available	854	Open in IMG/M
3300004633\|Ga0066395_10513482	Not Available	692	Open in IMG/M
3300004633\|Ga0066395_10625835	Not Available	633	Open in IMG/M
3300005179\|Ga0066684_10503562	Not Available	813	Open in IMG/M
3300005184\|Ga0066671_10098610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1616	Open in IMG/M
3300005187\|Ga0066675_10708405	Not Available	757	Open in IMG/M
3300005332\|Ga0066388_100069454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3817	Open in IMG/M
3300005332\|Ga0066388_100249784	All Organisms → cellular organisms → Bacteria	2412	Open in IMG/M
3300005332\|Ga0066388_101591032	Not Available	1149	Open in IMG/M
3300005332\|Ga0066388_101613717	Not Available	1142	Open in IMG/M
3300005332\|Ga0066388_103729730	Not Available	777	Open in IMG/M
3300005332\|Ga0066388_104718737	Not Available	693	Open in IMG/M
3300005332\|Ga0066388_105138654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	664	Open in IMG/M
3300005332\|Ga0066388_105555481	Not Available	638	Open in IMG/M
3300005332\|Ga0066388_106425702	Not Available	593	Open in IMG/M
3300005332\|Ga0066388_107217332	Not Available	558	Open in IMG/M
3300005332\|Ga0066388_107290645	Not Available	555	Open in IMG/M
3300005332\|Ga0066388_108173029	Not Available	522	Open in IMG/M
3300005332\|Ga0066388_108372852	Not Available	515	Open in IMG/M
3300005332\|Ga0066388_108515820	Not Available	511	Open in IMG/M
3300005363\|Ga0008090_10084431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3955	Open in IMG/M
3300005363\|Ga0008090_15455489	Not Available	700	Open in IMG/M
3300005436\|Ga0070713_100546083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1097	Open in IMG/M
3300005436\|Ga0070713_100611516	Not Available	1036	Open in IMG/M
3300005576\|Ga0066708_10122631	Not Available	1569	Open in IMG/M
3300005764\|Ga0066903_100942108	Not Available	1569	Open in IMG/M
3300005764\|Ga0066903_101003288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1526	Open in IMG/M
3300005764\|Ga0066903_101281601	Not Available	1367	Open in IMG/M
3300005764\|Ga0066903_103444104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	853	Open in IMG/M
3300005764\|Ga0066903_103642281	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300005764\|Ga0066903_104058863	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300005764\|Ga0066903_107772986	Not Available	551	Open in IMG/M
3300005764\|Ga0066903_108389169	Not Available	527	Open in IMG/M
3300005764\|Ga0066903_109003882	Not Available	505	Open in IMG/M
3300006031\|Ga0066651_10402290	Not Available	730	Open in IMG/M
3300006059\|Ga0075017_100455093	Not Available	966	Open in IMG/M
3300006086\|Ga0075019_11006915	Not Available	538	Open in IMG/M
3300006175\|Ga0070712_100028808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3718	Open in IMG/M
3300006755\|Ga0079222_10203441	Not Available	1194	Open in IMG/M
3300006797\|Ga0066659_11504154	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300006804\|Ga0079221_10189089	Not Available	1117	Open in IMG/M
3300006804\|Ga0079221_11676554	Not Available	517	Open in IMG/M
3300006806\|Ga0079220_10080786	Not Available	1631	Open in IMG/M
3300006806\|Ga0079220_10304797	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300006806\|Ga0079220_10662530	Not Available	757	Open in IMG/M
3300006954\|Ga0079219_10010699	Not Available	3065	Open in IMG/M
3300006954\|Ga0079219_10502067	Not Available	850	Open in IMG/M
3300006954\|Ga0079219_12525302	Not Available	500	Open in IMG/M
3300009792\|Ga0126374_10009654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3726	Open in IMG/M
3300009792\|Ga0126374_10014424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3253	Open in IMG/M
3300009792\|Ga0126374_10064914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1925	Open in IMG/M
3300010043\|Ga0126380_10088139	Not Available	1822	Open in IMG/M
3300010046\|Ga0126384_10005149	All Organisms → cellular organisms → Bacteria	7982	Open in IMG/M
3300010046\|Ga0126384_10222331	Not Available	1509	Open in IMG/M
3300010048\|Ga0126373_10078568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3001	Open in IMG/M
3300010048\|Ga0126373_10323743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1545	Open in IMG/M
3300010048\|Ga0126373_10537060	Not Available	1216	Open in IMG/M
3300010048\|Ga0126373_11414564	Not Available	761	Open in IMG/M
3300010048\|Ga0126373_11882782	Not Available	661	Open in IMG/M
3300010154\|Ga0127503_10552235	Not Available	531	Open in IMG/M
3300010358\|Ga0126370_11636892	Not Available	617	Open in IMG/M
3300010358\|Ga0126370_11792704	Not Available	594	Open in IMG/M
3300010358\|Ga0126370_11856786	Not Available	585	Open in IMG/M
3300010358\|Ga0126370_12266491	Not Available	537	Open in IMG/M
3300010359\|Ga0126376_10069713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2567	Open in IMG/M
3300010359\|Ga0126376_10787070	Not Available	927	Open in IMG/M
3300010360\|Ga0126372_10770479	All Organisms → cellular organisms → Bacteria → Proteobacteria	949	Open in IMG/M
3300010360\|Ga0126372_10997987	Not Available	848	Open in IMG/M
3300010361\|Ga0126378_11378543	Not Available	798	Open in IMG/M
3300010361\|Ga0126378_11590713	Not Available	742	Open in IMG/M
3300010366\|Ga0126379_12865562	Not Available	577	Open in IMG/M
3300010366\|Ga0126379_13067219	Not Available	559	Open in IMG/M
3300010366\|Ga0126379_13586086	Not Available	520	Open in IMG/M
3300010376\|Ga0126381_100022432	All Organisms → cellular organisms → Bacteria	7423	Open in IMG/M
3300010376\|Ga0126381_100361431	All Organisms → cellular organisms → Bacteria	2010	Open in IMG/M
3300010376\|Ga0126381_103070096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	662	Open in IMG/M
3300010376\|Ga0126381_104334474	Not Available	549	Open in IMG/M
3300010398\|Ga0126383_12136075	Not Available	647	Open in IMG/M
3300012177\|Ga0153943_1124560	Not Available	557	Open in IMG/M
3300012206\|Ga0137380_10046643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3977	Open in IMG/M
3300012209\|Ga0137379_10179742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2028	Open in IMG/M
3300012357\|Ga0137384_10253139	Not Available	1469	Open in IMG/M
3300012971\|Ga0126369_10944819	Not Available	949	Open in IMG/M
3300012971\|Ga0126369_11287718	All Organisms → cellular organisms → Bacteria → Proteobacteria	821	Open in IMG/M
3300012971\|Ga0126369_11681530	Not Available	724	Open in IMG/M
3300016270\|Ga0182036_10532992	Not Available	934	Open in IMG/M
3300016270\|Ga0182036_11309866	Not Available	604	Open in IMG/M
3300016319\|Ga0182033_10093248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2194	Open in IMG/M
3300016341\|Ga0182035_10021770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3993	Open in IMG/M
3300016341\|Ga0182035_11178982	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300016371\|Ga0182034_10098894	Not Available	2084	Open in IMG/M
3300016371\|Ga0182034_10110342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1993	Open in IMG/M
3300016371\|Ga0182034_11584873	Not Available	575	Open in IMG/M
3300016371\|Ga0182034_11640470	Not Available	565	Open in IMG/M
3300016371\|Ga0182034_11745809	Not Available	548	Open in IMG/M
3300016387\|Ga0182040_10031401	Not Available	3115	Open in IMG/M
3300016404\|Ga0182037_11737573	Not Available	557	Open in IMG/M
3300016422\|Ga0182039_10537360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1014	Open in IMG/M
3300016445\|Ga0182038_10020017	Not Available	4004	Open in IMG/M
3300016445\|Ga0182038_12116809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	510	Open in IMG/M
3300017822\|Ga0187802_10209221	Not Available	751	Open in IMG/M
3300017936\|Ga0187821_10063569	Not Available	1332	Open in IMG/M
3300017942\|Ga0187808_10260074	Not Available	777	Open in IMG/M
3300017955\|Ga0187817_10147928	Not Available	1493	Open in IMG/M
3300018431\|Ga0066655_10293055	Not Available	1057	Open in IMG/M
3300018482\|Ga0066669_10237015	Not Available	1431	Open in IMG/M
3300020579\|Ga0210407_11387604	Not Available	522	Open in IMG/M
3300021171\|Ga0210405_11010985	Not Available	626	Open in IMG/M
3300021560\|Ga0126371_10058353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3714	Open in IMG/M
3300021560\|Ga0126371_11311109	Not Available	857	Open in IMG/M
3300021560\|Ga0126371_11403371	Not Available	829	Open in IMG/M
3300021560\|Ga0126371_11695421	Not Available	756	Open in IMG/M
3300021560\|Ga0126371_13546728	Not Available	526	Open in IMG/M
3300022724\|Ga0242665_10391257	Not Available	506	Open in IMG/M
3300025905\|Ga0207685_10464047	Not Available	661	Open in IMG/M
3300025915\|Ga0207693_10057895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3036	Open in IMG/M
3300025915\|Ga0207693_10137756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1919	Open in IMG/M
3300025915\|Ga0207693_10711550	Not Available	777	Open in IMG/M
3300025929\|Ga0207664_11480337	Not Available	600	Open in IMG/M
3300026871\|Ga0207825_106774	Not Available	860	Open in IMG/M
3300026910\|Ga0207840_1017404	Not Available	723	Open in IMG/M
3300027070\|Ga0208365_1053211	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300027516\|Ga0207761_1055075	Not Available	773	Open in IMG/M
3300027765\|Ga0209073_10071450	Not Available	1180	Open in IMG/M
3300027787\|Ga0209074_10009826	Not Available	2338	Open in IMG/M
3300027787\|Ga0209074_10230454	Not Available	710	Open in IMG/M
3300027874\|Ga0209465_10019651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3101	Open in IMG/M
3300027898\|Ga0209067_10123483	Not Available	1360	Open in IMG/M
3300027898\|Ga0209067_10422344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300031057\|Ga0170834_102661583	Not Available	1104	Open in IMG/M
3300031057\|Ga0170834_102739449	All Organisms → cellular organisms → Bacteria → Proteobacteria	2001	Open in IMG/M
3300031231\|Ga0170824_112421031	Not Available	834	Open in IMG/M
3300031231\|Ga0170824_113200187	All Organisms → cellular organisms → Bacteria → Proteobacteria	2103	Open in IMG/M
3300031469\|Ga0170819_10243690	Not Available	549	Open in IMG/M
3300031469\|Ga0170819_17893855	Not Available	755	Open in IMG/M
3300031545\|Ga0318541_10033846	All Organisms → cellular organisms → Bacteria → Proteobacteria	2549	Open in IMG/M
3300031545\|Ga0318541_10234576	Not Available	1018	Open in IMG/M
3300031545\|Ga0318541_10301284	Not Available	893	Open in IMG/M
3300031545\|Ga0318541_10734761	Not Available	551	Open in IMG/M
3300031561\|Ga0318528_10139411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1288	Open in IMG/M
3300031573\|Ga0310915_10000313	All Organisms → cellular organisms → Bacteria	23235	Open in IMG/M
3300031573\|Ga0310915_10014467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4665	Open in IMG/M
3300031573\|Ga0310915_10108758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1882	Open in IMG/M
3300031681\|Ga0318572_10207529	Not Available	1145	Open in IMG/M
3300031682\|Ga0318560_10365181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	780	Open in IMG/M
3300031719\|Ga0306917_10906692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ORS 375	689	Open in IMG/M
3300031724\|Ga0318500_10697171	Not Available	518	Open in IMG/M
3300031744\|Ga0306918_10015683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4451	Open in IMG/M
3300031744\|Ga0306918_10862163	Not Available	706	Open in IMG/M
3300031744\|Ga0306918_11471320	Not Available	521	Open in IMG/M
3300031768\|Ga0318509_10233538	Not Available	1026	Open in IMG/M
3300031770\|Ga0318521_10401556	Not Available	817	Open in IMG/M
3300031770\|Ga0318521_10643854	Not Available	642	Open in IMG/M
3300031770\|Ga0318521_11002726	Not Available	512	Open in IMG/M
3300031777\|Ga0318543_10168155	Not Available	968	Open in IMG/M
3300031778\|Ga0318498_10014175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	3276	Open in IMG/M
3300031780\|Ga0318508_1233576	Not Available	528	Open in IMG/M
3300031781\|Ga0318547_10043999	Not Available	2373	Open in IMG/M
3300031833\|Ga0310917_10018331	Not Available	3985	Open in IMG/M
3300031833\|Ga0310917_10034869	All Organisms → cellular organisms → Bacteria	3001	Open in IMG/M
3300031833\|Ga0310917_11129447	Not Available	522	Open in IMG/M
3300031879\|Ga0306919_11528657	Not Available	502	Open in IMG/M
3300031880\|Ga0318544_10017876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2342	Open in IMG/M
3300031880\|Ga0318544_10347890	Not Available	576	Open in IMG/M
3300031890\|Ga0306925_10173568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2322	Open in IMG/M
3300031910\|Ga0306923_10030083	All Organisms → cellular organisms → Bacteria	5847	Open in IMG/M
3300031910\|Ga0306923_10077539	All Organisms → cellular organisms → Bacteria	3720	Open in IMG/M
3300031910\|Ga0306923_11883343	Not Available	611	Open in IMG/M
3300031910\|Ga0306923_12506524	Not Available	508	Open in IMG/M
3300031912\|Ga0306921_10386425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1634	Open in IMG/M
3300031912\|Ga0306921_10401267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1600	Open in IMG/M
3300031941\|Ga0310912_10145288	Not Available	1786	Open in IMG/M
3300031942\|Ga0310916_10205741	Not Available	1648	Open in IMG/M
3300031942\|Ga0310916_10784999	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031945\|Ga0310913_10733054	Not Available	698	Open in IMG/M
3300031946\|Ga0310910_10110717	All Organisms → cellular organisms → Bacteria	2052	Open in IMG/M
3300031946\|Ga0310910_10197083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1561	Open in IMG/M
3300031946\|Ga0310910_10613723	Not Available	862	Open in IMG/M
3300031947\|Ga0310909_10181606	Not Available	1742	Open in IMG/M
3300031954\|Ga0306926_10178464	Not Available	2634	Open in IMG/M
3300031954\|Ga0306926_12291985	Not Available	598	Open in IMG/M
3300031959\|Ga0318530_10381687	Not Available	584	Open in IMG/M
3300032001\|Ga0306922_10174693	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300032001\|Ga0306922_11405024	Not Available	701	Open in IMG/M
3300032035\|Ga0310911_10021895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3093	Open in IMG/M
3300032035\|Ga0310911_10297697	Not Available	928	Open in IMG/M
3300032035\|Ga0310911_10512773	Not Available	695	Open in IMG/M
3300032039\|Ga0318559_10391434	Not Available	648	Open in IMG/M
3300032041\|Ga0318549_10148714	Not Available	1042	Open in IMG/M
3300032042\|Ga0318545_10292039	Not Available	586	Open in IMG/M
3300032043\|Ga0318556_10387083	Not Available	732	Open in IMG/M
3300032044\|Ga0318558_10549803	Not Available	577	Open in IMG/M
3300032055\|Ga0318575_10393797	Not Available	703	Open in IMG/M
3300032094\|Ga0318540_10476623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300032180\|Ga0307471_102606777	Not Available	640	Open in IMG/M
3300032261\|Ga0306920_103878557	Not Available	545	Open in IMG/M
3300033289\|Ga0310914_10019548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5219	Open in IMG/M
3300033289\|Ga0310914_11613103	Not Available	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.52%
Host-Associated	Host-Associated	0.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.69%
Aquatic	Environmental → Aquatic	4.83%
Fungi	Host-Associated → Fungi	0.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.69%
Freshwater	Environmental → Aquatic → Freshwater	2.90%
Sediment	Environmental → Aquatic → Sediment	1.93%
Mycelium	Host-Associated → Fungi → Mycelium	0.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.40%
Loam	Environmental → Terrestrial → Soil → Loam	20.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.48%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.48%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.86%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.93%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.48%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.48%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.93%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.97%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.48%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.48%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.48%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026871	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 78 (SPAdes)	Environmental	Open in IMG/M
3300026910	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10624322	3300000579	Forest Soil	MTAEKFGAHHEGWRTLWLAIAGVMAITLTWNVLMLSMNGISY*
AF_2010_repII_A01DRAFT_10030313	3300000580	Forest Soil	MKTERFAGRHEGWRALWLAIAGVMAIMLTWNVLMLSLNGISY*
AF_2010_repII_A01DRAFT_10221133	3300000580	Forest Soil	AGNREGWRALWLAIAGVMAIMLAWNVLILSLNGVSY*
AF_2010_repII_A1DRAFT_100015702	3300000597	Forest Soil	MNTEKFEGEGWRTLWIAIAGVLAITLTWNVLMXSLNGISY*
AF_2010_repII_A001DRAFT_100839501	3300000793	Forest Soil	TAACRGAMNTEKFEGEGWRTLWIAIAGVLAITLTWNVLMLSLNGISY*
JGI12627J18819_101932563	3300001867	Forest Soil	KSEAMNTEKFEDHREEWRTLWLAIAGVMAITLTWNVLMLSLNGISY*
JGIcombinedJ51221_103490161	3300003505	Forest Soil	MNTEKFEDHREEWRTLWLAIAGVMAITLTWNVLMLSLNGISY*
Ga0062386_1006945111	3300004152	Bog Forest Soil	EKFEGHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY*
Ga0066395_102136192	3300004633	Tropical Forest Soil	MRTERFAGHREGWRTLWLAIAGVIAIMLTWNVLVLSLNDISY*
Ga0066395_103198722	3300004633	Tropical Forest Soil	MKTEKLHEGWRALWLAIAGVMAIMLIWNVVMLSLKGISY*
Ga0066395_105134822	3300004633	Tropical Forest Soil	FCRGAMNTEKFEDHHEGWRTLWLAIAGVMAITLAWNVLMLSLNGISY*
Ga0066395_106258351	3300004633	Tropical Forest Soil	MKTEKLHEGWRALWLAIAGVMAIMLIWNVVMLSLNGISY*
Ga0066684_105035621	3300005179	Soil	MNTEKFETRDEGWRTLWLTIAGVMAITLTWNVLMLSLNGISY*
Ga0066671_100986102	3300005184	Soil	MNDTENLEGHHEGWRTLWLAVAGVVAITLTWNVLMLSFNGISY*
Ga0066675_107084051	3300005187	Soil	MKTEKLHEGWRALWLAIAGVMAIMLIWNVVMHSLNGISY*
Ga0066388_1000694542	3300005332	Tropical Forest Soil	MNTEKFEGNEGWRTLWLTIAGVMAITLAWNVLMLSLNGISY*
Ga0066388_1002497842	3300005332	Tropical Forest Soil	MNTEKFEGHDEGWRTLWLAIAGVMAITLTSNVLMLSLNGISY*
Ga0066388_1015910322	3300005332	Tropical Forest Soil	MNTEKFDGEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY*
Ga0066388_1016137173	3300005332	Tropical Forest Soil	MKTEKLHEGWRALWLAIAGVVAIMLIWNVVTLSLNGISY*
Ga0066388_1037297301	3300005332	Tropical Forest Soil	MKTEKLHEGWRALWLAIAGVMAIMLIWNVLMLSLNGILY*
Ga0066388_1047187373	3300005332	Tropical Forest Soil	MNTEKLEGHDEGWRTLWLAIAGVMAITLTWNVLMLSLNGIRIELQRI
Ga0066388_1051386542	3300005332	Tropical Forest Soil	MNKEKFEDHHEGWRALWLAIAGAMAVTLTWNVLMLTLNGISY*
Ga0066388_1055554812	3300005332	Tropical Forest Soil	MNTEKFEGEGWRTLWLAIAGVLAITLTWNVLMLSLNGTSH*
Ga0066388_1064257021	3300005332	Tropical Forest Soil	MKTEKLHEGWRALWLAIAGVMVIMLIWNVVMLSLNGISY*
Ga0066388_1072173322	3300005332	Tropical Forest Soil	QAMNTEKFDGEGWRTLWLAIAGVLGITLTWNVLMLSLNGISY*
Ga0066388_1072906451	3300005332	Tropical Forest Soil	MNTEKFEYHHQGWRTLWLAIAGVMAITLTWNVLMLSLNGI
Ga0066388_1081730291	3300005332	Tropical Forest Soil	MNKEKFEDHHEGWRALWLAIAGAMAITLTWNVLMLTLNGISY*
Ga0066388_1083728521	3300005332	Tropical Forest Soil	MNTEKFEGDEGWRTLWLAIEGVMAITLTWNVLMLSLNGISY*
Ga0066388_1085158201	3300005332	Tropical Forest Soil	AMNTEKFEGEGWRTLWLAIAGVMAITLTWNVLMLSLNGVSY*
Ga0008090_100844313	3300005363	Tropical Rainforest Soil	MRTERFAGHREGWRTLWLAIAGVMAIMLTWNVLVLSLNDISY*
Ga0008090_154554892	3300005363	Tropical Rainforest Soil	AMNTEKFEGEGWRTIWLAIAGVLAITLTWNVLMLSLNGISY*
Ga0070713_1005460832	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNNTEKFEDHHEGWRALWVAVAGVMAMTLTWNVLMFSLNGVSY*
Ga0070713_1006115164	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQSLSDQDHHEGWRTLWLTIAGVMALTLTWNVLMVSLNGISY
Ga0066708_101226311	3300005576	Soil	MKTEKLHEGWRALWLAIAGVMAIMLIWNVVMLSLNGILIELQQISP
Ga0066903_1009421083	3300005764	Tropical Forest Soil	MKTEKRLHEGWKALWLAIAGVLAITLTWNVLMLGLNGFSY*
Ga0066903_1010032884	3300005764	Tropical Forest Soil	MNTEKFEGNEGWRTLWLAIAGVMAITVTWNVLMLSLNGISY*
Ga0066903_1012816011	3300005764	Tropical Forest Soil	MNAEKFEGNEGWRTLWIAIAGVLAITLTWNVLMLSLNG
Ga0066903_1034441042	3300005764	Tropical Forest Soil	MNTEKFEGEGWRTLWLAIAGVMAITLTWNVLMLLNGISY*
Ga0066903_1036422813	3300005764	Tropical Forest Soil	EKLHEGWRALWLAIAGVMVVMLIWNVVMLSLNGISY*
Ga0066903_1040588633	3300005764	Tropical Forest Soil	MKTEKFEGEGWRTLWLAVAGVLGITLSWNGLMLSLNGMSY*
Ga0066903_1077729861	3300005764	Tropical Forest Soil	KFEAHQEGWRSLWLTIAGVLAITLAWNVLMLSLNGISY*
Ga0066903_1083891692	3300005764	Tropical Forest Soil	MKTEKLHEGWRALWLGIAGVMVIMLIWNVVMLSLNGISY*
Ga0066903_1090038821	3300005764	Tropical Forest Soil	THHEGWKALWLAVAGVLAITLTWNVLMLSLNGISY*
Ga0066651_104022901	3300006031	Soil	MKTEKLHEGWRALWLAIAGEAIMLIWNVVMLSMNGISY*
Ga0075017_1004550933	3300006059	Watersheds	MNNTEKFEDHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGFSY*
Ga0075019_110069151	3300006086	Watersheds	VMNTEKFEAHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY*
Ga0070712_1000288083	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRSLSDQGHHEGWRTLWLAIAGVMAITLTWNVIMVSLNGISY*
Ga0079222_102034412	3300006755	Agricultural Soil	MKTEKVEDHHKEWRTLWLALAGVMAITLTWNVLMLSLNGISY*
Ga0066659_115041542	3300006797	Soil	SRQVAFCREAMNTKKLEGEGWRSLWLAIAGVLAITLTWNVLMVSLNGISY*
Ga0079221_101890891	3300006804	Agricultural Soil	KVEDHHKEWRTLWLALAGVMAITLTWNVLMLSLNGISY*
Ga0079221_116765541	3300006804	Agricultural Soil	GANFKNGKTMNIKKSEDHREGWRTLWITIAGVMAIMVTWNVLMLSLKGVSY*
Ga0079220_100807862	3300006806	Agricultural Soil	MNIKKSEDHREGWRTLWITIAGVMAIMVTWNVLMLSLKGVSY*
Ga0079220_103047972	3300006806	Agricultural Soil	MNTEKLESHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY*
Ga0079220_106625301	3300006806	Agricultural Soil	GHHEGWRTLWLAIAGVMAITLTWNVLMLSMNGISY*
Ga0079219_100106992	3300006954	Agricultural Soil	MQTFSDRHATHHEGWRNLWLTIAGVTAITLTWNVLMLSLNGISY*
Ga0079219_105020672	3300006954	Agricultural Soil	MQSLSDQGHHEGWRTLWLAIAGVMAITLTWNVLMVSLNGISY*
Ga0079219_125253021	3300006954	Agricultural Soil	MAANLFNRKPMNTEKFEGDEGWLTLWLAIAGVIGITLTWNVLMLSLNGISY*
Ga0126374_100096545	3300009792	Tropical Forest Soil	GAMNTEKFEGEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY*
Ga0126374_100144244	3300009792	Tropical Forest Soil	MKTERFAGHHEGWRALWLAIAGVMAIMLTWNVLMLSLNGISY*
Ga0126374_100649143	3300009792	Tropical Forest Soil	MNTEKFEDHHEGWRTLWLAIAGVMAITLAWNVLMLSLNGISY*
Ga0126380_100881392	3300010043	Tropical Forest Soil	MNAEKFEGNEGWRTLWIAIAGVLAITLTWNVLMLSLNGMSY*
Ga0126384_100051498	3300010046	Tropical Forest Soil	MKTERFAGHHEGWRTLWLTIAGVMAIMLTWNVLIVSLNGISY*
Ga0126384_102223314	3300010046	Tropical Forest Soil	MNKEKFEDHHEGWRALWLAIAGAMAITLTRNVLMLTLNGISY*
Ga0126373_100785685	3300010048	Tropical Forest Soil	HHEGWRTLWFAIAGVMAITLAWNVLMLSFNGISY*
Ga0126373_103237432	3300010048	Tropical Forest Soil	CRGAMKTEKFEGEGWRTLWLAVAGVLGITLSWNGLMLSLNGMSY*
Ga0126373_105370601	3300010048	Tropical Forest Soil	RVLIGIFSMKTEKLHEGWRALWLAIAGVMVVMLIWNVVMLSLNGISY*
Ga0126373_114145642	3300010048	Tropical Forest Soil	MDAEKFEAHHEGWRTLWLAIAGVMAITLTWNVLMLSMNGISY*
Ga0126373_118827821	3300010048	Tropical Forest Soil	MNTENFEDHHEGWRTLWLAIAAVMAVMLKWNVLMLSLNGISY*
Ga0127503_105522351	3300010154	Soil	MNNTEKFEDHHEGWRTLWFAIAGVMAITLTWNVLMLSLNGISY*
Ga0126370_116368922	3300010358	Tropical Forest Soil	EAHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGVSY*
Ga0126370_117927042	3300010358	Tropical Forest Soil	GRRHEGWRALWLAIAGVMAVMLAWNVLLLSLNGISY*
Ga0126370_118567863	3300010358	Tropical Forest Soil	MNKVKFEDHHEGWRALWLAIAGAMAVTLTWNVLMLTLNGISY*
Ga0126370_122664912	3300010358	Tropical Forest Soil	MNTEKLEGHDEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY*
Ga0126376_100697131	3300010359	Tropical Forest Soil	MNTEKFEGDEGWRTLWLAIVGVMAITLTWNVLMLSLNGISY*
Ga0126376_107870701	3300010359	Tropical Forest Soil	MKTERFAGHHEGWRALWLAIAGVMAIMLTWNVFMLSLNGISY*
Ga0126372_107704791	3300010360	Tropical Forest Soil	KFDGEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY*
Ga0126372_109979872	3300010360	Tropical Forest Soil	MNTEKFEGNEGWRTLWLTIAGVMAITLAWTVLMLSLNGISY*
Ga0126378_113785431	3300010361	Tropical Forest Soil	MKTEKLHEGWRTLWIAIAGMMDITLTWNVLILSLNGVSY
Ga0126378_115907131	3300010361	Tropical Forest Soil	MNTDKFEAHHEGWRTLWFAIASVMAITLAWNVLMLSF
Ga0126379_128655621	3300010366	Tropical Forest Soil	MNTEKFKGEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0126379_130672192	3300010366	Tropical Forest Soil	MNTEKFEGDDGWRTLWLAIVGVMAITLTWNVLMLSLNGISY*
Ga0126379_135860862	3300010366	Tropical Forest Soil	AEKFEGNEGWRTLWIAIAGVLAITLTWNVLMLSLNGMSY*
Ga0126381_10002243213	3300010376	Tropical Forest Soil	MNKGKFEDHHEGWRALWLAIAGAMAVTLTWNVLMLTLNGISY*
Ga0126381_1003614312	3300010376	Tropical Forest Soil	MKTERFAGHHEGWRTLWLTIAGVMAIMLTWNVLIVT*
Ga0126381_1030700962	3300010376	Tropical Forest Soil	KTEKLHEGWRALWLAIAGVMAIMLIWNVVMFSLNGISY*
Ga0126381_1043344741	3300010376	Tropical Forest Soil	MNTDKLEYREGWRTLWLAIAGVMAITLTWNVLMLSLNG
Ga0126383_121360751	3300010398	Tropical Forest Soil	MNAEKFEGNEGWRTVWIAIAGVLAIMLTWNVLMVSL
Ga0153943_11245601	3300012177	Attine Ant Fungus Gardens	FLKSEAMVAERFESHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGVSY*
Ga0137380_100466433	3300012206	Vadose Zone Soil	MNTEKFEGHHEGWRTLWLAIMGVMAITLTWNVLMLSLNGISY*
Ga0137379_101797421	3300012209	Vadose Zone Soil	KFEGHHEGWRTLWLAIMGVMAITLTWNVLMLSLNGISY*
Ga0137384_102531392	3300012357	Vadose Zone Soil	MNTEKFEGHHEGWRTLRVAIMGVMAITLTWNVLMLSLNGISY*
Ga0126369_109448191	3300012971	Tropical Forest Soil	TQIVNAEKFEGEGWRTLWIAIAGVLAITLTWNVLMLSLNGISY*
Ga0126369_112877181	3300012971	Tropical Forest Soil	AHHEGWRTLWLAIAGVMAITLTWNVLMLSMNGISY*
Ga0126369_116815301	3300012971	Tropical Forest Soil	MNTEKFDGEGWRTLWLAIAGVMAITLTWNVLMLSLNGIS
Ga0182036_105329921	3300016270	Soil	AMNTEKFEGHDEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0182036_113098662	3300016270	Soil	MNTGKLEGHDEGWRTLWLAIAGVIAITLTWNVLMLSLNGISY
Ga0182033_100932481	3300016319	Soil	ERICWEVNTEKFEGEGWRTLWIAIVGVMAITLTWNVLMVSLNGISY
Ga0182035_100217703	3300016341	Soil	MRTERFAGHREGWRTLWLAIAGVMAIMLTWNVLVLSLNDISY
Ga0182035_111789822	3300016341	Soil	RGAMNTEKFDGEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0182034_100988941	3300016371	Soil	AMNTEKFEGHDEGWRTLWLAIAGVMAITLTSNVLMLSLNGISY
Ga0182034_101103422	3300016371	Soil	MNTEKLEGHDEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0182034_115848731	3300016371	Soil	ESVGRRHEGWRALWLAIAGVMAVMLAWNVLMLSLNGISY
Ga0182034_116404701	3300016371	Soil	MNTEKFEGEGWRTLWLAIAGVMAITPTCNVLMLKK
Ga0182034_117458091	3300016371	Soil	MNTEKFEGEGWRTLWIAIVGVMAITLTWNVLMLSLNGISY
Ga0182040_100314011	3300016387	Soil	KLHEGWRALWLAIAGVMAIMLIWNVVMFSLNGISY
Ga0182037_117375732	3300016404	Soil	YATPHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0182039_105373601	3300016422	Soil	NTEKFEGEGWRTLWLAIAGVMAITLTWNVLMPNLNGISY
Ga0182038_100200175	3300016445	Soil	MNDEKFKSHHEGWRTLWLAIAAVMAVMLTWNVLMLSLNGISY
Ga0182038_121168092	3300016445	Soil	AMNTEKFDGEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0187802_102092211	3300017822	Freshwater Sediment	MNNTEKFEDYHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0187821_100635691	3300017936	Freshwater Sediment	GSQLLKAEAMNAEKFESQHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0187808_102600742	3300017942	Freshwater Sediment	DMKTENFEGHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0187817_101479282	3300017955	Freshwater Sediment	MNAEKFENHYEGWRTLWLAIAGVMAITLTWNVLMLSLNGVSY
Ga0066655_102930551	3300018431	Grasslands Soil	MNTEKFETRDEGWRTLWLTIAGVMAITLTWNVLMLSLNGISY
Ga0066669_102370152	3300018482	Grasslands Soil	MKTEKLHEGWRALWLAIAGVMAIMLIWNVVMLSLNGISY
Ga0210407_113876041	3300020579	Soil	ASRPLIFDKASETHMHIKSEAMNAKRFESHHEGWRTLWLAIAGVMAITLTWNVLMLRLNGISY
Ga0210405_110109853	3300021171	Soil	IKSEAMNAKRFESHHEGWRTLWLAIAGVMAITLTWNVLMLRLNGISY
Ga0126371_100583534	3300021560	Tropical Forest Soil	MKTEKLHEGWRALWLAIAGVMAIMLIWNVVMLSLKGISY
Ga0126371_113111092	3300021560	Tropical Forest Soil	FAMKTEKLHEGWRALWLAIAGVMAIMLIWNVVMLSLNGLSY
Ga0126371_114033712	3300021560	Tropical Forest Soil	MKTEKLHEGWRALWLAIAGVMAIMLIWNVLMLSLNGILY
Ga0126371_116954211	3300021560	Tropical Forest Soil	MNTEKFDGEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0126371_135467281	3300021560	Tropical Forest Soil	MNTENFEDHHEGWRTLWLAIAAVMAVMLKWNVLMLSLNGISY
Ga0242665_103912572	3300022724	Soil	ETHMHIKSEAMNAKRFESHHEGWRTLWLAIAGVMAITLTWNVLMLRLNGISY
Ga0207685_104640471	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	KFEGHHEGWRTLWLAIAGVMAIMLTWNVLILGLNGISY
Ga0207693_100578955	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRSLSDQGHHEGWRTLWLAIAGVMAITLTWNVIMVSLNGISY
Ga0207693_101377563	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNDEKCEVHHEGWRTLWLAIAGVMAITLQWNVLMLTFNGVSY
Ga0207693_107115502	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNTEQFEDHREGWRTLWLAIAGVMAITLTWNVLMLSL
Ga0207664_114803371	3300025929	Agricultural Soil	QFEDHREGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0207825_1067742	3300026871	Tropical Forest Soil	MNTEKFEGEGWRTLWLAIAGVMAITLGWNVLMLSLNGISY
Ga0207840_10174041	3300026910	Tropical Forest Soil	VTAASRDAMNTEKFEGEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0208365_10532111	3300027070	Forest Soil	FEGDEGWRTLWLAIAGVMAITLTWNVLMLSLKGISY
Ga0207761_10550752	3300027516	Tropical Forest Soil	MKTDRLHEGWRALWLTIAGVIAMMLIWNVAMFSLNG
Ga0209073_100714502	3300027765	Agricultural Soil	MNIKKSEDHREGWRTLWITIAGVMAIMVTWNVLMLSLKGVSY
Ga0209074_100098261	3300027787	Agricultural Soil	MQSLSDQGHHEGWRTLWLAIAGVMAITLTWNVLMVSLNGISY
Ga0209074_102304542	3300027787	Agricultural Soil	MNTEKFEGDHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0209465_100196514	3300027874	Tropical Forest Soil	MKTERFAGHHEGWRALWLAIAGVMAIMLTWNVLMLSLNGISY
Ga0209067_101234833	3300027898	Watersheds	MNNTEKFEDHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0209067_104223442	3300027898	Watersheds	NNTEKFEDHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0170834_1026615832	3300031057	Forest Soil	MNNTEKFEDHHEGWRTLWLAIAGVMAITLTWNVLMLSL
Ga0170834_1027394494	3300031057	Forest Soil	MNTEKFEGEGWRSLWLTIAGVLAITLTWNVLMLGLNGISY
Ga0170824_1124210312	3300031231	Forest Soil	FEDHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0170824_1132001875	3300031231	Forest Soil	MNTEKFEGEGWRSLWLAIAGVLAITLTWNVLMLGLNGISY
Ga0170819_102436902	3300031469	Forest Soil	MNNAEEFEDHHEGWRTLWLAIAGVMAITMTWNVLMLSLN
Ga0170819_178938551	3300031469	Forest Soil	AMNNTEKFEDHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0318541_100338461	3300031545	Soil	MKTEKLHEGWRALWLAIAGVMAITLTWNVLMLSLNG
Ga0318541_102345763	3300031545	Soil	MNNEKFEDHHEGGRALWLAIAAVMAITLTWTVLMLSSNGISY
Ga0318541_103012841	3300031545	Soil	VKTEKLHEGWRALWLAIAGVMAIMLIWNVVMFSLNGISY
Ga0318541_107347611	3300031545	Soil	QVVDQPEGWRTLWLAIVGVMAITLTWNVLMLSLNGISY
Ga0318528_101394112	3300031561	Soil	TERFAGHREGWRTLWLAIAGVIAIMLTWNVLVLSLNDISY
Ga0310915_100003136	3300031573	Soil	MNTEKFEGHDEGWRTLWLAIAGVMAITLTSNVLMLSLNGISY
Ga0310915_100144675	3300031573	Soil	MKTEKLHEGWRALWLAIAGVMAITLTWNVLMLSLNGISY
Ga0310915_101087582	3300031573	Soil	MNTKKFEGEGWRTLWLAIAGVMAITLTWNVLMLTLNGISY
Ga0318572_102075293	3300031681	Soil	AAVTSARWGMDTEQFEDHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0318560_103651812	3300031682	Soil	TEKFEGHHEGWRTLWLAIAGVMAIMLTWNVLMLSLNGISY
Ga0306917_109066921	3300031719	Soil	RTGSIMNNEKFEDHHEGGRALWLAIAAVMAITLTWTVLMLSSNGISY
Ga0318500_106971712	3300031724	Soil	TQIVNAEKFEGEGWRTLWLAIAGVLAITLTWNVLMLSLNGISY
Ga0306918_100156832	3300031744	Soil	MNNEKFEDHHEGWRALWLAIAAVMAITLTWTVLMLSSNGISY
Ga0306918_108621633	3300031744	Soil	TKKFEGEGWRTLWLAIAGVMAITLTWNVLMLTLNGISY
Ga0306918_114713201	3300031744	Soil	MKAEKFVAHHEGWRTLWFAIAGVMAITLTWNVLMLS
Ga0318509_102335384	3300031768	Soil	ADMQTLSDRYEAHHEGWRTLWLTIAGVMAITLTWNVLMLSLNGISY
Ga0318521_104015563	3300031770	Soil	KNESVGHRHEGWRALWLAIAGVMAVMLAWNVLMLSLNGISY
Ga0318521_106438541	3300031770	Soil	MNTEKFEGHHEGWRTLWLAIAGVMAIMLTWNVLMLSLN
Ga0318521_110027261	3300031770	Soil	MNTEKFDGEGWRTLWLAIAGVMAITLTWNVLMLSL
Ga0318543_101681552	3300031777	Soil	MNTEKFEGDEGWRALWLAIAGVMAVMLAWNVLMLSLNGISY
Ga0318498_100141757	3300031778	Soil	MKTERFAGHYEGWRALWLAIAGVMAIMLTWNVLMLSLNGISY
Ga0318508_12335761	3300031780	Soil	GAMNTKKFEGEGWRTLWLAIAGVMAITLTWNVLMLTLNGISY
Ga0318547_100439991	3300031781	Soil	SQAMNTEKFEGDEGWRALWLAIVGVMAITLTWNVLMLSLNGISY
Ga0310917_100183311	3300031833	Soil	MNTEKLEGHDEGWRTLWLAIAGVMAITLTWNVLMLS
Ga0310917_100348692	3300031833	Soil	MQTLSDRYEAHHEGWRTLCLTIAGVMAITLTWNVLMLSLNGISY
Ga0310917_111294472	3300031833	Soil	KFVAHHEGWRTLWFAIAGVMAITLTWNVLMLSLKGISY
Ga0306919_115286571	3300031879	Soil	AMNTEKFEGEGWRTLWLVIAGVLAITLTWNVLMLSLNGISY
Ga0318544_100178762	3300031880	Soil	MRTERFAGHREGWRTLWLAIAGVIAIMLTWNVLVLSLNDIS
Ga0318544_103478901	3300031880	Soil	MDTEQFEDHHEGWRTLWLAIVGVMAITLTWNVLMLSLNGISY
Ga0306925_101735681	3300031890	Soil	MNTEKFEGDEGWRALWLAIVGVMAITLTWNVLMLSLNGISY
Ga0306923_100300838	3300031910	Soil	MNTEKFEGNEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0306923_100775396	3300031910	Soil	MNTEKFEGNEGWRTLWLAIAGVLAITLTWNVLMLSLNGISY
Ga0306923_118833431	3300031910	Soil	NRGAMNTEKFEGEGWRTLWLAVAGVIAMTLTWNVIMLSLNGISY
Ga0306923_125065241	3300031910	Soil	MNTEKFEGEGWRTLWLVIAGVLAITLTWNVLMLSLNGIS
Ga0306921_103864253	3300031912	Soil	EKFEGEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0306921_104012672	3300031912	Soil	MQTLSDRYEAHHEGWRTLWLTIAGVMAITLTWNVLMLSLNGISY
Ga0310912_101452881	3300031941	Soil	MNTEKFEGEGWRTLWLAIAGVMAITLAWNVLMLSLNGISY
Ga0310916_102057411	3300031942	Soil	GSQFFKSEAMNTEKFEGHHEGWRTLWLAIAGVMAIMLTWNVLVLSLNGISY
Ga0310916_107849992	3300031942	Soil	KFEGHDEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0310913_107330541	3300031945	Soil	KFEGNEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0310910_101107174	3300031946	Soil	IVNAEKFEGEGWRTLWLAIAGVLAITLTWNVLMLSLNGISY
Ga0310910_101970833	3300031946	Soil	RDAMNTEKFEGEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0310910_106137231	3300031946	Soil	SHHEGLRALWLAIAGVMAITLTWNVLMLTLNGISY
Ga0310909_101816064	3300031947	Soil	FKSEAMNTEKFEDHHEGWRTLWLAIAGVMAIMLTWNVLVLSLNGISY
Ga0306926_101784641	3300031954	Soil	LVMKTHRLHEGWRALWLAIAGVIAMMLIWNVAMFSLNGISY
Ga0306926_122919853	3300031954	Soil	VKAEKLEAHHEGWRTLWIAITGVMALTLAWNVLMQSLSGISD
Ga0318530_103816871	3300031959	Soil	MQTLSDRYEAHHEGWRTLWLTIAGVMAITLTWNVLMLSLNGIS
Ga0306922_101746931	3300032001	Soil	NTEKFEGEGWRTLWLAIAGVMAITLRWNVLMLSLNGISY
Ga0306922_114050242	3300032001	Soil	VEDQPEGWRTLWLAIVGVMAITLTWNVLMLSLNGISY
Ga0310911_100218956	3300032035	Soil	WGMDTEQFEDHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0310911_102976971	3300032035	Soil	FEDHHEGWRTLWFAIAGVMGITLAWNVLMLSLNGISY
Ga0310911_105127732	3300032035	Soil	KFESHHEGWRALWLAIAGVMAITLTWNVLMLTLNGISY
Ga0318559_103914341	3300032039	Soil	MNAEKFEGHHEGWRTLWLAIAGVMAIMLTWNVLMLSLNGISY
Ga0318549_101487141	3300032041	Soil	MKADRLHEGWRALWLAIAGVIAMMLIWNVAMFSLNGISY
Ga0318545_102920392	3300032042	Soil	NESVGRRHEGWRALWLAIAGVMAVMLAWNVLMLSLNGISY
Ga0318556_103870831	3300032043	Soil	NESVGRRHEGWRALWLAIAGMMAVMLAWNVLMLSLNGISY
Ga0318558_105498031	3300032044	Soil	TLVMKTDRLHEGWRALWLAIAGVIAMMLIWNVAMFSLNGISY
Ga0318575_103937971	3300032055	Soil	RKLMNTEKLEGHDEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0318540_104766232	3300032094	Soil	GIFPMKTEKLHEGWRALWFAIAGVMVVMLIWNVVMLSLNGISY
Ga0307471_1026067772	3300032180	Hardwood Forest Soil	MNAEKFENHYEGWRTLWLAIAGVMAITLTWNVLMLSLNGV
Ga0306920_1038785572	3300032261	Soil	VEAHHEGWRSLWLAIAGVMGITLTWNILMLSLNGISY
Ga0310914_100195481	3300033289	Soil	DHHEGWRTLWLAIAGVMAITLTWNVLMLSLNGISY
Ga0310914_116131031	3300033289	Soil	EAHHEGWRSLWLAIAGVMGITLTWNILMLSLNGISY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F024169

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences