Metagenome Family F025708

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F025708
Family Type	Metagenome
Number of Sequences	200
Average Sequence Length	37 residues
Representative Sequence	MDKGIGLWLNIGSLILVAALVIDFVWVIKTALNAH
Number of Associated Samples	139
Number of Associated Scaffolds	200

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.50 %
% of genes near scaffold ends (potentially truncated)	15.50 %
% of genes from short scaffolds (< 2000 bps)	79.00 %
Associated GOLD sequencing projects	130
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.500 % of family members)
Environment Ontology (ENVO)	Unclassified (24.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.79% β-sheet: 0.00% Coil/Unstructured: 49.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 200 Family Scaffolds
PF00106	adh_short	32.00
PF13561	adh_short_C2	15.00
PF13594	Obsolete Pfam Family	8.50
PF01979	Amidohydro_1	6.50
PF01230	HIT	5.50
PF00583	Acetyltransf_1	3.00
PF02812	ELFV_dehydrog_N	2.00
PF05193	Peptidase_M16_C	1.50
PF00449	Urease_alpha	1.50
PF13147	Obsolete Pfam Family	1.50
PF13365	Trypsin_2	1.00
PF13628	DUF4142	1.00
PF00857	Isochorismatase	0.50
PF07969	Amidohydro_3	0.50
PF09844	DUF2071	0.50
PF01728	FtsJ	0.50
PF00795	CN_hydrolase	0.50
PF11969	DcpS_C	0.50

COG ID	Name	Functional Category	% Frequency in 200 Family Scaffolds
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	2.00
COG0804	Urease alpha subunit	Amino acid transport and metabolism [E]	1.50
COG0293	23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ	Translation, ribosomal structure and biogenesis [J]	0.50
COG1189	Predicted rRNA methylase YqxC, contains S4 and FtsJ domains	Translation, ribosomal structure and biogenesis [J]	0.50
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.50
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.50

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.00 %
Unclassified	root	N/A	2.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.00 %
Unclassified	root	N/A	2.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.00 %
Unclassified	root	N/A	2.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	14.00 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	7.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.00 %
Unclassified	root	N/A	2.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.50 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.50 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	14.00 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.00 %
Unclassified	root	N/A	2.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.50 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.50 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	14.00 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.00 %
Unclassified	root	N/A	2.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.50 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.50 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	13.00 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.00 %
Unclassified	root	N/A	2.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.50 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.50 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.50 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.00 %
Unclassified	root	N/A	2.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.50 %
Candidatus Rokubacteria bacterium CSP1-6	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium CSP1-6	0.50 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.50 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2043913	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2229922	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	823	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101914123	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1491	Open in IMG/M
3300000443\|F12B_10698614	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300000559\|F14TC_100179469	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	758	Open in IMG/M
3300000559\|F14TC_102352531	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300001661\|JGI12053J15887_10149781	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300005332\|Ga0066388_101493071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1181	Open in IMG/M
3300005332\|Ga0066388_102081490	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300005356\|Ga0070674_102150658	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005540\|Ga0066697_10105331	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300005540\|Ga0066697_10118946	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300005540\|Ga0066697_10120516	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300005540\|Ga0066697_10260058	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300005540\|Ga0066697_10582266	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005552\|Ga0066701_10039941	All Organisms → cellular organisms → Bacteria	2510	Open in IMG/M
3300005552\|Ga0066701_10083470	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300005552\|Ga0066701_10517617	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005553\|Ga0066695_10022883	All Organisms → cellular organisms → Bacteria	3521	Open in IMG/M
3300005555\|Ga0066692_10103674	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300005555\|Ga0066692_10538785	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300005555\|Ga0066692_11014592	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005556\|Ga0066707_10062322	All Organisms → cellular organisms → Bacteria	2199	Open in IMG/M
3300005557\|Ga0066704_10801291	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	586	Open in IMG/M
3300005558\|Ga0066698_10070541	All Organisms → cellular organisms → Bacteria	2253	Open in IMG/M
3300005558\|Ga0066698_10122558	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300005713\|Ga0066905_100043267	All Organisms → cellular organisms → Bacteria	2690	Open in IMG/M
3300005713\|Ga0066905_100124457	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300005713\|Ga0066905_100184614	Not Available	1542	Open in IMG/M
3300005713\|Ga0066905_100264900	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300005713\|Ga0066905_100619524	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	918	Open in IMG/M
3300005713\|Ga0066905_100954768	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	753	Open in IMG/M
3300005713\|Ga0066905_101191517	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005713\|Ga0066905_102075162	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005713\|Ga0066905_102083653	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005718\|Ga0068866_11062001	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300005719\|Ga0068861_101168360	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005764\|Ga0066903_100228369	All Organisms → cellular organisms → Bacteria	2834	Open in IMG/M
3300005764\|Ga0066903_100242977	All Organisms → cellular organisms → Bacteria	2765	Open in IMG/M
3300005764\|Ga0066903_100403176	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300005764\|Ga0066903_101233486	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300005764\|Ga0066903_109094944	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005843\|Ga0068860_101438597	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005937\|Ga0081455_10689608	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300006034\|Ga0066656_10000006	All Organisms → cellular organisms → Bacteria	55742	Open in IMG/M
3300006046\|Ga0066652_100069691	All Organisms → cellular organisms → Bacteria	2733	Open in IMG/M
3300006755\|Ga0079222_11956552	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300006844\|Ga0075428_101581147	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	686	Open in IMG/M
3300006852\|Ga0075433_10046972	All Organisms → cellular organisms → Bacteria	3755	Open in IMG/M
3300006854\|Ga0075425_100654491	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300006854\|Ga0075425_101096835	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	906	Open in IMG/M
3300007255\|Ga0099791_10009515	All Organisms → cellular organisms → Bacteria	4043	Open in IMG/M
3300007255\|Ga0099791_10382773	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	676	Open in IMG/M
3300007258\|Ga0099793_10145647	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300007258\|Ga0099793_10562609	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300009012\|Ga0066710_103418779	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300009038\|Ga0099829_10700482	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	841	Open in IMG/M
3300009094\|Ga0111539_10004379	All Organisms → cellular organisms → Bacteria	18476	Open in IMG/M
3300009137\|Ga0066709_101068565	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300009143\|Ga0099792_10477246	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300009147\|Ga0114129_11929065	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	716	Open in IMG/M
3300009157\|Ga0105092_10485870	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	707	Open in IMG/M
3300009162\|Ga0075423_10024351	All Organisms → cellular organisms → Bacteria	6044	Open in IMG/M
3300009162\|Ga0075423_10694358	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300009792\|Ga0126374_11244068	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300009808\|Ga0105071_1011994	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300009810\|Ga0105088_1088939	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	561	Open in IMG/M
3300009812\|Ga0105067_1003288	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300009813\|Ga0105057_1047514	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300009816\|Ga0105076_1118284	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300009818\|Ga0105072_1072231	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300009837\|Ga0105058_1102313	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	673	Open in IMG/M
3300009837\|Ga0105058_1160381	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300010043\|Ga0126380_10324163	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300010043\|Ga0126380_10782401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300010047\|Ga0126382_10184449	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300010047\|Ga0126382_10204842	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300010304\|Ga0134088_10279388	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300010329\|Ga0134111_10520731	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300010336\|Ga0134071_10000266	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	16785	Open in IMG/M
3300010336\|Ga0134071_10468469	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300010358\|Ga0126370_10239414	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300010358\|Ga0126370_12033150	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300010359\|Ga0126376_10556548	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300010359\|Ga0126376_11842876	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300010359\|Ga0126376_11914974	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	633	Open in IMG/M
3300010362\|Ga0126377_10353529	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300010397\|Ga0134124_10028720	All Organisms → cellular organisms → Bacteria → Proteobacteria	4593	Open in IMG/M
3300010398\|Ga0126383_10049496	All Organisms → cellular organisms → Bacteria	3489	Open in IMG/M
3300010400\|Ga0134122_11057559	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	800	Open in IMG/M
3300011269\|Ga0137392_10408970	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300011271\|Ga0137393_10732966	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	846	Open in IMG/M
3300012096\|Ga0137389_10309763	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300012202\|Ga0137363_11536507	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300012203\|Ga0137399_10155466	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1831	Open in IMG/M
3300012203\|Ga0137399_10865800	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300012210\|Ga0137378_11509896	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	583	Open in IMG/M
3300012355\|Ga0137369_10421612	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	958	Open in IMG/M
3300012509\|Ga0157334_1015028	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300012685\|Ga0137397_10485957	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300012918\|Ga0137396_10487284	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	914	Open in IMG/M
3300012922\|Ga0137394_10401870	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1168	Open in IMG/M
3300012922\|Ga0137394_10918286	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	730	Open in IMG/M
3300012925\|Ga0137419_10679817	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	833	Open in IMG/M
3300012929\|Ga0137404_10002474	All Organisms → cellular organisms → Bacteria	12220	Open in IMG/M
3300012930\|Ga0137407_10286039	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1504	Open in IMG/M
3300012948\|Ga0126375_10022499	All Organisms → cellular organisms → Bacteria	2970	Open in IMG/M
3300012971\|Ga0126369_10264178	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300012972\|Ga0134077_10050818	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300012972\|Ga0134077_10143320	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300012975\|Ga0134110_10576470	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300014326\|Ga0157380_12343743	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300015053\|Ga0137405_1284504	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300015170\|Ga0120098_1008389	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1083	Open in IMG/M
3300017656\|Ga0134112_10083278	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1190	Open in IMG/M
3300017656\|Ga0134112_10300445	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300017792\|Ga0163161_11777493	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300017939\|Ga0187775_10060805	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300017997\|Ga0184610_1099623	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	920	Open in IMG/M
3300018064\|Ga0187773_10084573	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300018075\|Ga0184632_10069615	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300018076\|Ga0184609_10343331	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium CSP1-6	697	Open in IMG/M
3300018431\|Ga0066655_10035448	All Organisms → cellular organisms → Bacteria	2470	Open in IMG/M
3300018431\|Ga0066655_10202288	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300018433\|Ga0066667_10117319	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300018433\|Ga0066667_11317441	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300018468\|Ga0066662_10145013	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300018468\|Ga0066662_10384314	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300018468\|Ga0066662_10556594	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1061	Open in IMG/M
3300018468\|Ga0066662_10933289	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	855	Open in IMG/M
3300019789\|Ga0137408_1081607	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300019789\|Ga0137408_1122212	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300020170\|Ga0179594_10030840	Not Available	1710	Open in IMG/M
3300020170\|Ga0179594_10051869	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1386	Open in IMG/M
3300020170\|Ga0179594_10072456	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300021073\|Ga0210378_10282416	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300021560\|Ga0126371_12659163	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300025885\|Ga0207653_10283960	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300026285\|Ga0209438_1196554	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300026297\|Ga0209237_1030369	All Organisms → cellular organisms → Bacteria	2957	Open in IMG/M
3300026309\|Ga0209055_1005176	All Organisms → cellular organisms → Bacteria	7563	Open in IMG/M
3300026313\|Ga0209761_1150349	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300026328\|Ga0209802_1027281	All Organisms → cellular organisms → Bacteria	3044	Open in IMG/M
3300026329\|Ga0209375_1090529	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300026333\|Ga0209158_1007291	All Organisms → cellular organisms → Bacteria → Proteobacteria	5721	Open in IMG/M
3300026536\|Ga0209058_1031466	All Organisms → cellular organisms → Bacteria	3268	Open in IMG/M
3300026537\|Ga0209157_1336979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300026538\|Ga0209056_10120615	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300026540\|Ga0209376_1018188	All Organisms → cellular organisms → Bacteria → Proteobacteria	4769	Open in IMG/M
3300027068\|Ga0209898_1037023	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300027068\|Ga0209898_1059376	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300027169\|Ga0209897_1007751	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300027187\|Ga0209869_1006888	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300027324\|Ga0209845_1010078	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1596	Open in IMG/M
3300027511\|Ga0209843_1010478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1965	Open in IMG/M
3300027527\|Ga0209684_1015104	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1206	Open in IMG/M
3300027561\|Ga0209887_1026372	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300027646\|Ga0209466_1021439	All Organisms → cellular organisms → Bacteria → Proteobacteria	1342	Open in IMG/M
3300027654\|Ga0209799_1096246	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	671	Open in IMG/M
3300027655\|Ga0209388_1061310	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300027873\|Ga0209814_10003132	All Organisms → cellular organisms → Bacteria	6129	Open in IMG/M
3300027873\|Ga0209814_10015286	All Organisms → cellular organisms → Bacteria	3068	Open in IMG/M
3300027874\|Ga0209465_10041499	All Organisms → cellular organisms → Bacteria	2188	Open in IMG/M
3300027882\|Ga0209590_10180983	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300027903\|Ga0209488_10099705	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2176	Open in IMG/M
3300027907\|Ga0207428_10000191	All Organisms → cellular organisms → Bacteria	85144	Open in IMG/M
3300027907\|Ga0207428_10042583	All Organisms → cellular organisms → Bacteria	3671	Open in IMG/M
3300027909\|Ga0209382_10908269	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300028536\|Ga0137415_10005949	All Organisms → cellular organisms → Bacteria	12069	Open in IMG/M
3300028792\|Ga0307504_10053537	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300028792\|Ga0307504_10359345	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1038549	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10181406	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300031199\|Ga0307495_10129760	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031455\|Ga0307505_10300327	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300031544\|Ga0318534_10453321	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	735	Open in IMG/M
3300031545\|Ga0318541_10274781	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	938	Open in IMG/M
3300031546\|Ga0318538_10421887	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300031564\|Ga0318573_10072485	Not Available	1724	Open in IMG/M
3300031681\|Ga0318572_10455388	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300031720\|Ga0307469_10011106	All Organisms → cellular organisms → Bacteria	4425	Open in IMG/M
3300031720\|Ga0307469_10028199	All Organisms → cellular organisms → Bacteria	3207	Open in IMG/M
3300031720\|Ga0307469_10144320	All Organisms → cellular organisms → Bacteria	1769	Open in IMG/M
3300031720\|Ga0307469_10332943	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300031720\|Ga0307469_11846924	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031740\|Ga0307468_100134636	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300031740\|Ga0307468_100499469	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300031740\|Ga0307468_100654377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	869	Open in IMG/M
3300031740\|Ga0307468_100868770	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300031740\|Ga0307468_101896449	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300031747\|Ga0318502_10022979	All Organisms → cellular organisms → Bacteria	3050	Open in IMG/M
3300031779\|Ga0318566_10011409	All Organisms → cellular organisms → Bacteria	3694	Open in IMG/M
3300031820\|Ga0307473_10043994	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2062	Open in IMG/M
3300031820\|Ga0307473_10218129	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300031879\|Ga0306919_10043909	All Organisms → cellular organisms → Bacteria	2915	Open in IMG/M
3300031897\|Ga0318520_10089798	Not Available	1705	Open in IMG/M
3300032180\|Ga0307471_100058309	All Organisms → cellular organisms → Bacteria	3240	Open in IMG/M
3300032180\|Ga0307471_102658518	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300032770\|Ga0335085_10230692	All Organisms → cellular organisms → Bacteria	2241	Open in IMG/M
3300034178\|Ga0364934_0110862	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.00%
Host-Associated	Host-Associated	10.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Plants	Host-Associated → Plants	10.00%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.50%
Sediment	Environmental → Aquatic → Sediment	1.50%
Freshwater	Environmental → Aquatic → Freshwater	1.00%
Floodplain	Environmental → Terrestrial → Floodplain	0.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.00%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Sand	Environmental → Terrestrial → Soil → Sand	8.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.00%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.50%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.50%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	8.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.50%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.50%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.50%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.50%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	7.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.50%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.00%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.00%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.50%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.50%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.50%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.50%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.50%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027068	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027187	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_20439132	3300000033	Soil	MDKGVGLWLNIGSLILVVALVIDFIWVISTALNTH*
ICChiseqgaiiDRAFT_22299222	3300000033	Soil	MDDKGIGLWLNIGTLILVVALVIDFVWVIKTALSAAAH*
INPhiseqgaiiFebDRAFT_1019141232	3300000364	Soil	MDDKGLGLWLNIGSLILIAALVVDFYVGINAALHAP*
F12B_106986142	3300000443	Soil	MDEKGIGLWLNLGAIILVVALVIDFAWVISTALNAGGH*
F14TC_1001794692	3300000559	Soil	MDQKRIGLWLNIGSVILVAALVIDFVWVIKTALNVH*
F14TC_1023525311	3300000559	Soil	MDKGVGLWLNIGSLILIAALVVDFYVVINAALHAH*
JGI12053J15887_101497813	3300001661	Forest Soil	MDDKGIALWLNIGTLILVAALVVDFAWVISTALNAH*
Ga0066388_1014930713	3300005332	Tropical Forest Soil	PRRTTMDEKGIGLWLNLGSVILVVALVIDFVWVISTALNASGH*
Ga0066388_1020814901	3300005332	Tropical Forest Soil	MDEKGIGLWLNLGSVILVVALVIDFVWVISTALNAAGTESRLRSL
Ga0070674_1021506581	3300005356	Miscanthus Rhizosphere	RREPMDDKGLGLWLNIGSLILIAALVVDFYVVINAALHAH*
Ga0066697_101053313	3300005540	Soil	MDKGIGLWLNIGTVILVAALIVDFVWVISTALNAH*
Ga0066697_101189462	3300005540	Soil	MDKGVGLWLNIGTVILVAALIVDFVWVISTALNAH*
Ga0066697_101205162	3300005540	Soil	MDKGIGLWLNIGSLILVAALVIDFVWVIKTALNAH*
Ga0066697_102600582	3300005540	Soil	MNGNGVGLWLNIGSLILVAALVVDFIVVIRTALSVH*
Ga0066697_105822661	3300005540	Soil	MDEKGIGLWLSVGSVILVAALVIDFAWVISTALSTH*
Ga0066701_100399412	3300005552	Soil	MDEKGIGLWLNIGSLILIVALVIDFVWVIETALSAH*
Ga0066701_100834702	3300005552	Soil	MDKGIGLWLNIGTVVLVAALIVDFVWVISTALNAH*
Ga0066701_105176172	3300005552	Soil	MDENSIGLWLNIGSVILLAALVIDFVWVIKTAFSVH*
Ga0066695_100228832	3300005553	Soil	MDEKGIGLWLSIGSVILVAALVIDFAWVISTALSTH*
Ga0066692_101036742	3300005555	Soil	MDKGVGLWLNIGTVILVAALIVDFVWVISTAINAH*
Ga0066692_105387851	3300005555	Soil	MNGNGVGLWLNIGSLVLVAALVVDFIVVIRTALSVH*
Ga0066692_110145922	3300005555	Soil	MNGNGVGLWLNIGSLILVAALVIDFIVVIRTALSVH*
Ga0066707_100623224	3300005556	Soil	MDEHGIGLWLNIGSVILVAALVIDFVWVIRTALSVH*
Ga0066704_108012911	3300005557	Soil	SSRRTTMDEKGIGLWLSIGSVILVAALVIDFAWVISTALSTH*
Ga0066698_100705413	3300005558	Soil	MDEKSIGLWLNIGSVILFAALVIDFVWVIKTAFSVH*
Ga0066698_101225582	3300005558	Soil	MDEKVIGLWLSIGSVILVAALVIDFAWVISTALSTH*
Ga0066905_1000432674	3300005713	Tropical Forest Soil	DEKSIGLWLNLGSVILVAALVIDFVWVISTALNASGH*
Ga0066905_1001244572	3300005713	Tropical Forest Soil	MDEKSIGLWLNLGSVILVVALVIDFVWVISTALNASGH*
Ga0066905_1001846141	3300005713	Tropical Forest Soil	ENSSRRTTMDEKGIGLWLNLGSVILVVALVIDFVWVISTALNASGH*
Ga0066905_1002649003	3300005713	Tropical Forest Soil	MDEKSIGLWLNLGSIILVVALVIDFAWVISTAFSAA
Ga0066905_1006195241	3300005713	Tropical Forest Soil	MDKGVGLGLNIGSLILVVALVIDFIVVIRTALSAAGH*
Ga0066905_1009547682	3300005713	Tropical Forest Soil	RRTTMDEKSIGLWLNLGSIILVVALVIDFAWVISTAFSAAGH*
Ga0066905_1011915172	3300005713	Tropical Forest Soil	MDKGIGLWLNIGSLILVAALVIDFIWVIKTALSAAAH*
Ga0066905_1020751622	3300005713	Tropical Forest Soil	MDKGIGLWLNIGSLILVVALVIDFIWVIKTALSAAAH*
Ga0066905_1020836531	3300005713	Tropical Forest Soil	MDKGIGLWLNIGSLILVAALVVDFIWVIKTALSAAAH*
Ga0068866_110620012	3300005718	Miscanthus Rhizosphere	MDDKGLGLWLNIGSLILIAALVVDFYVVINAALHAH*
Ga0068861_1011683602	3300005719	Switchgrass Rhizosphere	MDEKSIGLWLNLGSIILVVALVIDFAWVISTAFSAAGH*
Ga0066903_1002283693	3300005764	Tropical Forest Soil	MDEKSIGLWLDLGSIILVVALVIDFAWVISTAFSASGH*
Ga0066903_1002429774	3300005764	Tropical Forest Soil	MDEKGIGLWLNLGSVILVVALVIDFVWVISTALNASGH*
Ga0066903_1004031762	3300005764	Tropical Forest Soil	MDKGVGLGLNIGSLILVVALVIDFIVVIKTALSVAAH*
Ga0066903_1012334862	3300005764	Tropical Forest Soil	MDNKGPGLWLNIGSLILIAALVVDFYVVINAALHAAGE*
Ga0066903_1090949442	3300005764	Tropical Forest Soil	MDKGVGLWLNIGSLILVVVLVIDFIVVIRNALSAAGH*
Ga0068860_1014385972	3300005843	Switchgrass Rhizosphere	MDKGLGLWLNIGSLILIAALVVDFYVVINTALHASH*
Ga0081455_106896082	3300005937	Tabebuia Heterophylla Rhizosphere	MDKGVGLWLNIGTVILVAALVVDFIWVISTALSAH*
Ga0066656_1000000631	3300006034	Soil	MDKRIGLWLNIGSAILIAALVIDFIWVITTAVGAAH*
Ga0066652_1000696911	3300006046	Soil	MNGNGVGLWLYIGSLILVAALVVDFIVVIRTALSVH*
Ga0079222_119565522	3300006755	Agricultural Soil	MDDKGPGLWLNIGSLILIAALVVDFYVVINAALHAAH*
Ga0075428_1015811472	3300006844	Populus Rhizosphere	NSSRRTTMDEKGIGLWLNLGSVILVVALVIDFVWVISTALNASGH*
Ga0075433_100469722	3300006852	Populus Rhizosphere	MDEKSIGLWLNLGSIILVVALAIDFAWVISTAFSAAGH*
Ga0075425_1006544912	3300006854	Populus Rhizosphere	MDDKGVGLWLNIGSLILIAALVVDFYVVINTALHAAH*
Ga0075425_1010968351	3300006854	Populus Rhizosphere	MDDKGLGLWLNVGSLILIAALVVDFYVVINAALHAAH*
Ga0099791_100095156	3300007255	Vadose Zone Soil	MDEKGIGLWLNIGSVILLAALVIDFVWVIKTAFSVH*
Ga0099791_103827732	3300007255	Vadose Zone Soil	MDKGIGLWLNIGSAILIAALVIDFVWVIKTALNTD*
Ga0099793_101456474	3300007258	Vadose Zone Soil	MDDKGIALWLNIGSLILVAALVVDFAWVISTALNAH*
Ga0099793_105626092	3300007258	Vadose Zone Soil	MNGNGVGLWLNIGSLVLVAALVVDFIVVIRAALSVH*
Ga0066710_1034187792	3300009012	Grasslands Soil	MDEHGIGLWLNIGSVILVAALVIDFVWVVRTALSVH
Ga0099829_107004822	3300009038	Vadose Zone Soil	MDEKSIGLWLNIGSVILLAALVIDFVWVIKTAFSVH*
Ga0111539_1000437915	3300009094	Populus Rhizosphere	MDKGVGLWLNIGSLILVVALVIDFIWVISTALNAH*
Ga0066709_1010685651	3300009137	Grasslands Soil	MDEQGIGLWLNIGSVILVAALVIDFVWVIRTALSVH*
Ga0099792_104772462	3300009143	Vadose Zone Soil	MDDKGIGLWLNIGSVILVAALVIDFAWVITTALSAH*
Ga0114129_119290651	3300009147	Populus Rhizosphere	MDKGVGLWLNIGSLILVVALVIDFIWVISTALSTH*
Ga0105092_104858701	3300009157	Freshwater Sediment	MDDKGVGLGLNIGSLILVVARVIDFVWVIKTALSAAAH*
Ga0075423_100243512	3300009162	Populus Rhizosphere	MDDKGLGLWLNIGSLILIAALVVDFYVVINTALHAH*
Ga0075423_106943582	3300009162	Populus Rhizosphere	MDKGIGLWLNIGSLILIAALVIDFIWVIKTAFNTH*
Ga0126374_112440681	3300009792	Tropical Forest Soil	MDKGVGLGLNIGSLILVVALVIDFIVVIKTALSAAAH*
Ga0105071_10119942	3300009808	Groundwater Sand	MDEKGLGLWLNIGTVILIAALVVDFVWVIKTALSVH*
Ga0105088_10889391	3300009810	Groundwater Sand	MDEKSIGLWLNIGSVVLLAALVIDFVWVIKTAFSVH*
Ga0105067_10032882	3300009812	Groundwater Sand	MDEKGLGLWLNIGSVILIAALVIDFVWVIKTALSVH*
Ga0105057_10475142	3300009813	Groundwater Sand	MDEKGLGLWLNIGSVILIAALVVDFVWVIKTALSVH*
Ga0105076_11182841	3300009816	Groundwater Sand	MDEKGLGLWLNIGSVILIAALVIDFVWVIKTALSV
Ga0105072_10722312	3300009818	Groundwater Sand	MDKKGLGLWLNIGSVILIAALVIDFVWVIKTALSVH*
Ga0105058_11023131	3300009837	Groundwater Sand	MDKKGLGLWLNIGSVILIAALVIDFVCVIKTALSVH*
Ga0105058_11603812	3300009837	Groundwater Sand	MLMDEESIGLWLNIGSVVLLAALVIDFVWVIKTAFSVH*
Ga0126380_103241632	3300010043	Tropical Forest Soil	MDKGIGLWLNVGSLILVVALVIDFIWVIKTALSAAAH*
Ga0126380_107824012	3300010043	Tropical Forest Soil	MDRGVGLWLNIGSLILVAALVVDFIWVIKTAFSAAAH*
Ga0126382_101844493	3300010047	Tropical Forest Soil	MDKGIGLWLNIGSLILVAALVVDFIWVIKTAFSAAAH*
Ga0126382_102048422	3300010047	Tropical Forest Soil	MDKGVGLWLNVGSLILVVALVIDFVVVIRTALNAAGH*
Ga0134088_102793882	3300010304	Grasslands Soil	MNGNGVGLWLNIGSVILIAALVVDFIVVIKTAFSVH*
Ga0134111_105207311	3300010329	Grasslands Soil	ENPSRRMPMDEKSIGLWLNIGSVIRCAALVIDFVWVIKTAFSVH*
Ga0134071_100002667	3300010336	Grasslands Soil	MDKRIGLWLNIGSAILIAALVIDFIWVITTAVGAAL*
Ga0134071_104684691	3300010336	Grasslands Soil	MDKGIGLWLNIGSLILIAALVIDFIWVIKTAFNAH*
Ga0126370_102394142	3300010358	Tropical Forest Soil	MDKGVGLWLNIGSLILIAALVVDFYVVINAALHAAAD*
Ga0126370_120331502	3300010358	Tropical Forest Soil	MDKGVGLGLNIGSLILVVVLVINFIVVIRAALSAAGH*
Ga0126376_105565482	3300010359	Tropical Forest Soil	MDDKSIGLWLNLGSIILVVALVIDFAWVISTAFSAAGH*
Ga0126376_118428762	3300010359	Tropical Forest Soil	MDDKGPGLWLNIGSLILIAALVVDFYVVLNAALHAAAH*
Ga0126376_119149741	3300010359	Tropical Forest Soil	NSLRREPMDKGVGLWLNIGSLILVVVLVIDFIVVIRNALSAAGH*
Ga0126377_103535292	3300010362	Tropical Forest Soil	MDKGVGVGLNIGSLILVVVLVIDFIVVIRAALSAAGH*
Ga0134124_100287208	3300010397	Terrestrial Soil	MDDKGLGLWLNIGSLILIAALVVDFYVVINAALHAAH*
Ga0126383_100494962	3300010398	Tropical Forest Soil	MDKGVGLWLNIGSLILVVALVIDFIVVIKTALSAAAH*
Ga0134122_110575591	3300010400	Terrestrial Soil	MDKGLGLWLNIGSLILIAALVMDFYVVINTALHASH*
Ga0137392_104089702	3300011269	Vadose Zone Soil	MLMDEKGIGLWLNIGSVILLAALVIDFVWVIKTAFSVH*
Ga0137393_107329662	3300011271	Vadose Zone Soil	MLMDEKSIGLWLNIGSVILLAALVIDFVWVIKTAFSVH*
Ga0137389_103097632	3300012096	Vadose Zone Soil	MDDKGIGLWLNIGSVILVAALVIDFAWVITTALNAH*
Ga0137363_115365071	3300012202	Vadose Zone Soil	MDDKGIGLLLNIGTVILLAALVVDFAWVISTALNAH*
Ga0137399_101554662	3300012203	Vadose Zone Soil	MNGNGVGLWLNIGSLILVAALVVDFIVVIRAALSVH*
Ga0137399_108658002	3300012203	Vadose Zone Soil	MDEQGIGLWLNIGSVILVAALVIDFVWVIKTALSVH*
Ga0137378_115098961	3300012210	Vadose Zone Soil	PMDDKGLGLWLNIGSLILIAALVVDFYVVINAALHAH*
Ga0137369_104216122	3300012355	Vadose Zone Soil	MLMDDKGVGLWLNIGSVVLLAALVIDFVWVIKTAFSVH*
Ga0157334_10150282	3300012509	Soil	MDEKSIGLWLNLGSIILVVTLVIDFAWVISTAFSAAGH*
Ga0137397_104859572	3300012685	Vadose Zone Soil	MNGNGVGLWLNIGSLILVAALVVDFIVVIRAAFSVAH*
Ga0137396_104872843	3300012918	Vadose Zone Soil	MNGNGVGLWLNIGSLILIAALVVDFIVVIKTALSVH*
Ga0137394_104018701	3300012922	Vadose Zone Soil	EPMDKGIGLWLNIGSLILIAALVIDFIWVIKTAFNAH*
Ga0137394_109182862	3300012922	Vadose Zone Soil	NEKVIGLWLSIGSVILVAALVIDFAWVISTALSTH*
Ga0137419_106798171	3300012925	Vadose Zone Soil	MNGNGVGLWLNIGSLILIAALVVDFIVVIKAALSVH*
Ga0137404_100024746	3300012929	Vadose Zone Soil	MDDKGIGLWLNIGTVILLAALVVDFAWVISTALNAH*
Ga0137407_102860394	3300012930	Vadose Zone Soil	RMPMDEKSIGLWLNIGSVILLAALVIDFVWVIKTAFSVH*
Ga0126375_100224994	3300012948	Tropical Forest Soil	MDKGVGLWLNIGSLILVVALVIDFVVVIRTALNAAGH*
Ga0126369_102641782	3300012971	Tropical Forest Soil	MDNKGPGLWLNIGSLILIAALVVDFYVVINAALRAAGE*
Ga0134077_100508181	3300012972	Grasslands Soil	MDENSIGLWLNIGSVILLAALVIDFVWVITTAFSVH*
Ga0134077_101433201	3300012972	Grasslands Soil	MLMDEKSIGLWLNIGSVILLVALVIDFVWVIKTAFSVH*
Ga0134110_105764702	3300012975	Grasslands Soil	MDKGVGLWLNIGTMILVAALIVDFVWVISTALNAH*
Ga0157380_123437432	3300014326	Switchgrass Rhizosphere	MDDKGLGLWLNIGSLILIAALVVDFYVVINTALHASH*
Ga0137405_12845043	3300015053	Vadose Zone Soil	MDGKGIGLWLNIGTVILIAALVIDFVWVIKTALSAH*
Ga0120098_10083891	3300015170	Fossill	MDEKGLGLWLNIGSVILIAALVVDFVRVIKTALSVH*
Ga0134112_100832782	3300017656	Grasslands Soil	MDEKVIGLWLSIGSVILVAALVIDFAWVISTALSTH
Ga0134112_103004451	3300017656	Grasslands Soil	MDENSIGLWLNIGSVILLAALVIDFVWVIKTAFSVH
Ga0163161_117774932	3300017792	Switchgrass Rhizosphere	MDEKSIGLCLNLGSIILVVALVIDFAWVISTAFSAAGH
Ga0187775_100608052	3300017939	Tropical Peatland	MDKGLGLWLNIGSLILIAALVVDFCVVITTALHAAGD
Ga0184610_10996233	3300017997	Groundwater Sediment	MDEKSIGLWLNIGSVILLAALVIDFVWVIKTAFSVH
Ga0187773_100845732	3300018064	Tropical Peatland	MDDKGLGLWLNIGSLILIAALVVDFCVVITTALHAAGD
Ga0184632_100696152	3300018075	Groundwater Sediment	MDEKSIGLWLNIGSVILLAALVIDFVWVITTAFSVH
Ga0184609_103433311	3300018076	Groundwater Sediment	MDEKSIGLWLNIGSVILLAALVIDFVWVITTAFSVL
Ga0066655_100354482	3300018431	Grasslands Soil	MDKRIGLWLNIGSAILIAALVIDFIWVITTAVGAAH
Ga0066655_102022882	3300018431	Grasslands Soil	MNGNGVGLWLNIGSLILVAALVVDFIVVIRTALSVH
Ga0066667_101173193	3300018433	Grasslands Soil	MDKGIGLWLNIGSLILVAALVIDFVWVIKTALNAH
Ga0066667_113174412	3300018433	Grasslands Soil	MDKGIGLWLNIGTVILVAALIVDFVWVISTALNAH
Ga0066662_101450133	3300018468	Grasslands Soil	MDEHGIGLWLNIGSVILVAALVIDFVWVIRTALSVH
Ga0066662_103843142	3300018468	Grasslands Soil	MDKGVGLWLNIGTVILVAALIVDFVWVISTALNAH
Ga0066662_105565941	3300018468	Grasslands Soil	MDEKGIGLWLNIGSLILIVALVIDFVWVIETALSAH
Ga0066662_109332892	3300018468	Grasslands Soil	MDENSIGLWLNIGSVILLAALVIDFVWVITTAFSVH
Ga0137408_10816072	3300019789	Vadose Zone Soil	MDDKGLGLWLNIGSLILIAALVVDFYVVINAALHAH
Ga0137408_11222121	3300019789	Vadose Zone Soil	MDEKGIGLWLSIGSVILVAALVIDFAWVISTALSTH
Ga0179594_100308401	3300020170	Vadose Zone Soil	TMDEKGIGLWLSIGSVILVAALVIDFAWVISTALSTH
Ga0179594_100518692	3300020170	Vadose Zone Soil	MDDKGIGLWLNIGTVILLAALVVDFAWVISTALNAH
Ga0179594_100724561	3300020170	Vadose Zone Soil	MDGKGIGLWLNIGTVILIAALVIDFVWVIKTALSAH
Ga0210378_102824161	3300021073	Groundwater Sediment	AENPSRRMPMDEKSIGLWLNVGSVILLAALVIDFVWVITTAFSVH
Ga0126371_126591632	3300021560	Tropical Forest Soil	MDNKGPGLWLNIGSLILIAALVVDFYVVINAALHAAGH
Ga0207653_102839602	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MDDKGLGLWLNIGSLILIAALVVDFYVVINTALHASH
Ga0209438_11965541	3300026285	Grasslands Soil	MDGKGIGLWLNIGTEILIAALVIDFVWVIKTALSAH
Ga0209237_10303695	3300026297	Grasslands Soil	MDEKGIGLWLNIGSVILLAALVIDFVWVIKTAFSVH
Ga0209055_10051766	3300026309	Soil	MDKGIGLWLNIGTVVLVAALIVDFVWVISTALNAH
Ga0209761_11503493	3300026313	Grasslands Soil	THTGRTPMNGNGVGLWLNIGSLVLVAALVVDFIVVIRAALSVH
Ga0209802_10272816	3300026328	Soil	MDKGVGLWLNIGTVILVAALIVDFVWVISTAINAH
Ga0209375_10905292	3300026329	Soil	MDEKGIGLWLSVGSVILVAALVIDFAWVISTALSTH
Ga0209158_10072917	3300026333	Soil	PMNGNGVGLWLNIGSLILVAALVVDFIVVIRTALSVH
Ga0209058_10314665	3300026536	Soil	MDEKSIGLWLNIGSVILFAALVIDFVWVIKTAFSVH
Ga0209157_13369792	3300026537	Soil	MNGNGVGLWLNLGSVILIAALVVDFIVVIRTALSVH
Ga0209056_101206155	3300026538	Soil	MDKGVGLWLNIGTVILVAALIVVFVWVISTALNAH
Ga0209376_10181884	3300026540	Soil	MDKGVGLWLNISTVILVAALIVDFVWVISTALNAH
Ga0209898_10370232	3300027068	Groundwater Sand	MDEKGLGLWLNIGSVILIAALVVDFVWVIKTALSVH
Ga0209898_10593761	3300027068	Groundwater Sand	MDEKSIGLWLNIGSVVLLAALVIDFVWVIKTAFSVH
Ga0209897_10077512	3300027169	Groundwater Sand	MDEKSIGLWLNIGSVVLLAALVIDFVWVIKTALSVH
Ga0209869_10068882	3300027187	Groundwater Sand	MDEKSIGLWLNIGSVILLAALVIDFVWVIKTALSVH
Ga0209845_10100782	3300027324	Groundwater Sand	MDEKGLGLWLNIGSVILIAALVIDFVWVIKTALSVH
Ga0209843_10104782	3300027511	Groundwater Sand	MDEKGLGLWLNIGSVILIAALVIDFVWVIKTAFSVH
Ga0209684_10151041	3300027527	Tropical Forest Soil	MDKGVGLWLNIGSLILVVVLVIDFIVVIRNALSAAGH
Ga0209887_10263722	3300027561	Groundwater Sand	MDKKGLGLWLNIGSVILIAALVIDFVWVIKTALSVH
Ga0209466_10214391	3300027646	Tropical Forest Soil	MDKGIGLWLNIGSLILVAALVVDFIWVIKTALSAAAH
Ga0209799_10962461	3300027654	Tropical Forest Soil	MDKGIGLWLNIGSLILVVALVIDFIWVIKTALSAAAH
Ga0209388_10613102	3300027655	Vadose Zone Soil	MDEKGIGLWLNIGSVILLAALVIDFVWVIKTALNTD
Ga0209814_100031326	3300027873	Populus Rhizosphere	MDKGVGLWLNIGTVILVAALVVDFIWVISTALSAH
Ga0209814_100152862	3300027873	Populus Rhizosphere	MDKGVGLWLNIGSLILVVALVIDFIWVISTALNTH
Ga0209465_100414992	3300027874	Tropical Forest Soil	MDKGVGLGLNIGSLILVVALVIDFIVVIKTALSVAAH
Ga0209590_101809833	3300027882	Vadose Zone Soil	SQLSVAGMELWLNVGSVILIAALVFDFAWVIVTALGTH
Ga0209488_100997052	3300027903	Vadose Zone Soil	MDDKGIGLWLNIGSVILVAALVIDFAWVITTALNAH
Ga0207428_1000019174	3300027907	Populus Rhizosphere	MDKGVGLWLNIGSLILVVALVIDFIWVISTALNAH
Ga0207428_100425835	3300027907	Populus Rhizosphere	MDEKSIGLWLNLGSIILVVALVIDFAWVISTAFSAAGH
Ga0209382_109082692	3300027909	Populus Rhizosphere	MDDKGIGLWLNIGTLILVVALVIDFVWVIKTALSAAAH
Ga0137415_1000594911	3300028536	Vadose Zone Soil	MDDKGIALWLNIGSLILVAALVVDFAWVISTALNAH
Ga0307504_100535372	3300028792	Soil	MDDKGIGLWLNIGSVILVAALVIDFAWVITTALIAH
Ga0307504_103593452	3300028792	Soil	MNGNGVGFWLNIGSLILVAALVVDFIVVIRAAFSVAH
(restricted) Ga0255311_10385492	3300031150	Sandy Soil	MDDKGIGLWLNIGSVILVAALVIDFAWVITTALSAH
(restricted) Ga0255310_101814061	3300031197	Sandy Soil	MDDKGIGLWLNIGSVILVAALVIDFAWVITTALIA
Ga0307495_101297602	3300031199	Soil	MNGNGVGLWLNIGSLILIAALVIDFIVVIKTALSVH
Ga0307505_103003272	3300031455	Soil	MDDKGLGLWLNIGSLILIAALVVDFYVVINAALHAAH
Ga0318534_104533212	3300031544	Soil	NKGPGLWLNIGSLILIAALVVDFSVVIRAALHAAGD
Ga0318541_102747811	3300031545	Soil	KGPGLWLNIGSLILVAALVVDFYVVIRAALHAAGD
Ga0318538_104218872	3300031546	Soil	MDNKGPGLWLNIGSLILVAALVVDFYVVIRAALHAAGD
Ga0318573_100724853	3300031564	Soil	EPMDKGVGLWLNIGSLILVVVLVIDFIVVIRNALSAAGH
Ga0318572_104553882	3300031681	Soil	MDDKGVGLWLNIGSLILIAALVVDFYVVINAALHAAGE
Ga0307469_100111065	3300031720	Hardwood Forest Soil	MDEKGIGLWLNLGSIILVVALVIDFAWVISTALSASGH
Ga0307469_100281994	3300031720	Hardwood Forest Soil	MDKGIALWLNIGSAILIAALVIDFVWVIKTALNTH
Ga0307469_101443202	3300031720	Hardwood Forest Soil	MDKGIGLWLNIGSLILIAALVIDFIWVIKTAFNAH
Ga0307469_103329432	3300031720	Hardwood Forest Soil	MDKGIGLWLNIGSVILIAALVIDFIWVIKTAFNAH
Ga0307469_118469241	3300031720	Hardwood Forest Soil	MDNKGLGLWLNIGSLILIAALVVDFYVVINAALHAAH
Ga0307468_1001346362	3300031740	Hardwood Forest Soil	MDDKGLGLWLNIGSLILIAALVVDFYVVFNAALHAH
Ga0307468_1004994692	3300031740	Hardwood Forest Soil	MDEKGIGLWLNLGSIILVVALVIDFAWVISTALNAGGH
Ga0307468_1006543772	3300031740	Hardwood Forest Soil	MDEKGIGLWLNLGSIILVVALVIDFVWVISTALNAGGH
Ga0307468_1008687702	3300031740	Hardwood Forest Soil	MDEKGIGLWLNIGSVILVAALVIDFAWVISTAFSAH
Ga0307468_1018964491	3300031740	Hardwood Forest Soil	MDDKGLGLWLNIGSLILIAALVVDFYVVINTALHAH
Ga0318502_100229791	3300031747	Soil	REPMDKGVGLWLNIGSLILVVVLVIDFIVVIRNALSAAGH
Ga0318566_100114091	3300031779	Soil	AESSLRREPMDKGVGLWLNIGSLILVVVLVIDFIVVIRNALSAAGH
Ga0307473_100439944	3300031820	Hardwood Forest Soil	MDKGIGLWLNIGSLILVAALVIDFIWVIKTALSAAAH
Ga0307473_102181292	3300031820	Hardwood Forest Soil	MDKGIGLWLNIGSLILIAALVLDFIWVIKTAFNAH
Ga0306919_100439091	3300031879	Soil	GRAESSLRREPMDKGVGLWLNIGSLILVVVLVIDFIVVIRNALSAAGH
Ga0318520_100897981	3300031897	Soil	LRRESMDKGVGLWLNIGSLILVVVLVIDFIVVIRNALSAAGH
Ga0307471_1000583095	3300032180	Hardwood Forest Soil	MDKGIGLWLNIGSLILIAALVVDFIWVIKTAFSAAAH
Ga0307471_1026585182	3300032180	Hardwood Forest Soil	MDEKGIGLWLNLGSVILVVALVIDFVWVISTALNASAH
Ga0335085_102306924	3300032770	Soil	MDDKGLGLWLNIGSLILIAALVVDFYVVINTALHAAH
Ga0364934_0110862_780_890	3300034178	Sediment	MDEKSNGLWLNIGSVILLAALVIDFVWVIKTAFSVH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters