Metagenome / Metatranscriptome Family F028323

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F028323
Family Type	Metagenome / Metatranscriptome
Number of Sequences	192
Average Sequence Length	54 residues
Representative Sequence	RLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPQSGAGGSETPKAA
Number of Associated Samples	138
Number of Associated Scaffolds	190

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.63 %
% of genes near scaffold ends (potentially truncated)	70.83 %
% of genes from short scaffolds (< 2000 bps)	80.73 %
Associated GOLD sequencing projects	128
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.062 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (37.500 % of family members)
Environment Ontology (ENVO)	Unclassified (43.229 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.688 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.77% β-sheet: 0.00% Coil/Unstructured: 69.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 190 Family Scaffolds
PF04480	DUF559	7.37
PF08530	PepX_C	5.26
PF05685	Uma2	3.16
PF08327	AHSA1	2.63
PF01872	RibD_C	2.11
PF02843	GARS_C	1.58
PF04471	Mrr_cat	1.05
PF14022	DUF4238	1.05
PF12686	DUF3800	1.05
PF01381	HTH_3	1.05
PF13304	AAA_21	1.05
PF13560	HTH_31	1.05
PF09851	SHOCT	1.05
PF06114	Peptidase_M78	1.05
PF04365	BrnT_toxin	0.53
PF13564	DoxX_2	0.53
PF04993	TfoX_N	0.53
PF03795	YCII	0.53
PF13376	OmdA	0.53
PF13166	AAA_13	0.53
PF14373	Imm_superinfect	0.53
PF02371	Transposase_20	0.53
PF01471	PG_binding_1	0.53
PF13614	AAA_31	0.53
PF01568	Molydop_binding	0.53
PF11074	DUF2779	0.53
PF13365	Trypsin_2	0.53
PF13540	RCC1_2	0.53
PF08378	NERD	0.53

COG ID	Name	Functional Category	% Frequency in 190 Family Scaffolds
COG2936	Predicted acyl esterase	General function prediction only [R]	5.26
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	3.16
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.11
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.11
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	1.58
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.53
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.53
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.53
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.06 %
Unclassified	root	N/A	10.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.06 %
Unclassified	root	N/A	10.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.06 %
Unclassified	root	N/A	10.94 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	17.19 %
Unclassified	root	N/A	10.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.38 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.56 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.52 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.52 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	17.19 %
Unclassified	root	N/A	10.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.12 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.12 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.56 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.04 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.52 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.52 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.52 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.52 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.52 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.52 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.52 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	14.58 %
Unclassified	root	N/A	10.94 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	3.12 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.56 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.04 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.04 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.52 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.52 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.52 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.52 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.52 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.52 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.52 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.52 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.52 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	14.58 %
Unclassified	root	N/A	10.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.12 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.56 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.04 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1.04 %
Chloroflexi bacterium RBG_16_64_43	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_64_43	0.52 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.52 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.52 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.52 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.52 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.52 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.52 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.52 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.52 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	14.58 %
Unclassified	root	N/A	10.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.12 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.56 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	1.04 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	1.04 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.52 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.52 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.52 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.52 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.52 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.52 %
Chloroflexi bacterium RBG_16_64_43	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_64_43	0.52 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.52 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.52 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	14.58 %
Unclassified	root	N/A	10.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.12 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.56 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1.04 %
unclassified Lysobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter	1.04 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.52 %
Microcystaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae	0.52 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.52 %
Dehalobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter	0.52 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.52 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.52 %
Chloroflexi bacterium RBG_16_64_43	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_64_43	0.52 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.52 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.52 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	14.58 %
Unclassified	root	N/A	10.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.12 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.56 %
Lysobacter sp. Root667	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. Root667	1.04 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1.04 %
Pseudomonas sp. RIT-PI-q	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. RIT-PI-q	0.52 %
unclassified Dehalobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter	0.52 %
Nitrospira sp. UW-LDO-01	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. UW-LDO-01	0.52 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.52 %
Microcystis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis	0.52 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.52 %
Chloroflexi bacterium RBG_16_64_43	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_64_43	0.52 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.52 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.52 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	14.58 %
Unclassified	root	N/A	10.94 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.12 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.56 %
Lysobacter sp. Root667	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. Root667	1.04 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1.04 %
Dehalobacter sp. 12DCB1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter → Dehalobacter sp. 12DCB1	0.52 %
Microcystis aeruginosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa	0.52 %
Pseudomonas sp. RIT-PI-q	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. RIT-PI-q	0.52 %
Nitrospira sp. UW-LDO-01	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. UW-LDO-01	0.52 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.52 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.52 %
Chloroflexi bacterium RBG_16_64_43	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_64_43	0.52 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.52 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.52 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002561\|JGI25384J37096_10103089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	989	Open in IMG/M
3300005166\|Ga0066674_10121578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1221	Open in IMG/M
3300005167\|Ga0066672_10059244	All Organisms → cellular organisms → Bacteria	2226	Open in IMG/M
3300005172\|Ga0066683_10102645	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300005172\|Ga0066683_10102645	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300005172\|Ga0066683_10508690	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005172\|Ga0066683_10918289	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005175\|Ga0066673_10259407	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300005175\|Ga0066673_10377800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	827	Open in IMG/M
3300005176\|Ga0066679_10228095	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300005180\|Ga0066685_11167270	Not Available	500	Open in IMG/M
3300005181\|Ga0066678_10851565	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005186\|Ga0066676_10708018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	686	Open in IMG/M
3300005441\|Ga0070700_101041217	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005444\|Ga0070694_100407602	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300005447\|Ga0066689_10186904	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300005450\|Ga0066682_10039662	All Organisms → cellular organisms → Bacteria	2813	Open in IMG/M
3300005450\|Ga0066682_10317810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. Root667	1004	Open in IMG/M
3300005467\|Ga0070706_101325187	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005467\|Ga0070706_101454904	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	627	Open in IMG/M
3300005468\|Ga0070707_101397442	Not Available	666	Open in IMG/M
3300005518\|Ga0070699_100674651	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300005518\|Ga0070699_102022255	Not Available	527	Open in IMG/M
3300005536\|Ga0070697_100059264	All Organisms → cellular organisms → Bacteria	3117	Open in IMG/M
3300005536\|Ga0070697_100342873	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300005545\|Ga0070695_100680742	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	815	Open in IMG/M
3300005555\|Ga0066692_10502670	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	771	Open in IMG/M
3300005557\|Ga0066704_10054804	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300005558\|Ga0066698_10819316	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005561\|Ga0066699_10332404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1085	Open in IMG/M
3300005575\|Ga0066702_10140173	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300006031\|Ga0066651_10216053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. Root667	1016	Open in IMG/M
3300006034\|Ga0066656_11060551	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300006034\|Ga0066656_11144612	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006046\|Ga0066652_100994002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	797	Open in IMG/M
3300006163\|Ga0070715_11082187	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300006791\|Ga0066653_10186349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1043	Open in IMG/M
3300006797\|Ga0066659_10165443	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300006797\|Ga0066659_11627226	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300006844\|Ga0075428_102610702	Not Available	516	Open in IMG/M
3300006845\|Ga0075421_101219028	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300006854\|Ga0075425_100026036	All Organisms → cellular organisms → Bacteria	6456	Open in IMG/M
3300006854\|Ga0075425_100054705	All Organisms → cellular organisms → Bacteria	4470	Open in IMG/M
3300006854\|Ga0075425_102269483	Not Available	604	Open in IMG/M
3300006871\|Ga0075434_100014538	All Organisms → cellular organisms → Bacteria	7527	Open in IMG/M
3300006903\|Ga0075426_10247909	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300006903\|Ga0075426_10263810	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300006903\|Ga0075426_10538794	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	869	Open in IMG/M
3300006914\|Ga0075436_100149028	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300006914\|Ga0075436_100657483	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. UW-LDO-01	774	Open in IMG/M
3300007076\|Ga0075435_100008226	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	7471	Open in IMG/M
3300007255\|Ga0099791_10383591	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300007258\|Ga0099793_10636212	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300007265\|Ga0099794_10245946	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300009012\|Ga0066710_100152675	All Organisms → cellular organisms → Bacteria	3214	Open in IMG/M
3300009012\|Ga0066710_101253597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1149	Open in IMG/M
3300009012\|Ga0066710_101688894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	964	Open in IMG/M
3300009012\|Ga0066710_102986583	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300009038\|Ga0099829_10015920	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5027	Open in IMG/M
3300009089\|Ga0099828_10009246	All Organisms → cellular organisms → Bacteria	7256	Open in IMG/M
3300009089\|Ga0099828_10571006	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300009090\|Ga0099827_10743733	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300009090\|Ga0099827_10756520	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300009100\|Ga0075418_11462247	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300009137\|Ga0066709_102433591	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	710	Open in IMG/M
3300009137\|Ga0066709_104177538	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300009143\|Ga0099792_10387484	Not Available	852	Open in IMG/M
3300009147\|Ga0114129_10063355	All Organisms → cellular organisms → Bacteria	5163	Open in IMG/M
3300009147\|Ga0114129_10546042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1508	Open in IMG/M
3300009162\|Ga0075423_11543490	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	713	Open in IMG/M
3300009597\|Ga0105259_1062499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_64_43	844	Open in IMG/M
3300009609\|Ga0105347_1072316	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1265	Open in IMG/M
3300009678\|Ga0105252_10002835	All Organisms → cellular organisms → Bacteria	6918	Open in IMG/M
3300010304\|Ga0134088_10093751	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300010329\|Ga0134111_10131355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	981	Open in IMG/M
3300010335\|Ga0134063_10071284	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1546	Open in IMG/M
3300010364\|Ga0134066_10360189	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300010396\|Ga0134126_10565052	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1305	Open in IMG/M
3300010403\|Ga0134123_13095351	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300011430\|Ga0137423_1008165	All Organisms → cellular organisms → Bacteria	3316	Open in IMG/M
3300011435\|Ga0137426_1008369	All Organisms → cellular organisms → Bacteria	2353	Open in IMG/M
3300011442\|Ga0137437_1001321	All Organisms → cellular organisms → Bacteria	8539	Open in IMG/M
3300011443\|Ga0137457_1144547	Not Available	787	Open in IMG/M
3300012096\|Ga0137389_10648953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa	907	Open in IMG/M
3300012189\|Ga0137388_11028147	Not Available	760	Open in IMG/M
3300012199\|Ga0137383_10239455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1330	Open in IMG/M
3300012200\|Ga0137382_10360016	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300012200\|Ga0137382_10914787	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300012201\|Ga0137365_10033794	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3921	Open in IMG/M
3300012201\|Ga0137365_10339197	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300012203\|Ga0137399_10577693	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300012203\|Ga0137399_10747539	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300012203\|Ga0137399_11153297	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	652	Open in IMG/M
3300012203\|Ga0137399_11283833	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	616	Open in IMG/M
3300012203\|Ga0137399_11583253	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300012204\|Ga0137374_10423070	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300012204\|Ga0137374_10583584	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300012205\|Ga0137362_10307506	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300012206\|Ga0137380_10599199	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	964	Open in IMG/M
3300012207\|Ga0137381_11806441	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300012208\|Ga0137376_10145275	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300012208\|Ga0137376_10826356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	797	Open in IMG/M
3300012209\|Ga0137379_10242573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1715	Open in IMG/M
3300012209\|Ga0137379_10301402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1513	Open in IMG/M
3300012210\|Ga0137378_10280935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1549	Open in IMG/M
3300012211\|Ga0137377_10936500	Not Available	797	Open in IMG/M
3300012211\|Ga0137377_11460608	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300012285\|Ga0137370_10625316	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012349\|Ga0137387_10478448	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	904	Open in IMG/M
3300012350\|Ga0137372_10132419	All Organisms → cellular organisms → Bacteria → Proteobacteria	2054	Open in IMG/M
3300012350\|Ga0137372_10532932	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300012353\|Ga0137367_10242993	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300012353\|Ga0137367_11214235	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300012356\|Ga0137371_10012031	All Organisms → cellular organisms → Bacteria	6685	Open in IMG/M
3300012356\|Ga0137371_10014591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6045	Open in IMG/M
3300012356\|Ga0137371_10037029	All Organisms → cellular organisms → Bacteria → Proteobacteria	3766	Open in IMG/M
3300012356\|Ga0137371_10396965	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300012356\|Ga0137371_10904684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	671	Open in IMG/M
3300012357\|Ga0137384_11362008	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300012357\|Ga0137384_11378962	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300012359\|Ga0137385_10314513	Not Available	1345	Open in IMG/M
3300012360\|Ga0137375_10251265	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300012360\|Ga0137375_10612285	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300012360\|Ga0137375_11088287	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300012360\|Ga0137375_11157044	Not Available	596	Open in IMG/M
3300012361\|Ga0137360_10234899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1499	Open in IMG/M
3300012363\|Ga0137390_10356703	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1443	Open in IMG/M
3300012363\|Ga0137390_11082553	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300012380\|Ga0134047_1257009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	509	Open in IMG/M
3300012402\|Ga0134059_1144780	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	520	Open in IMG/M
3300012469\|Ga0150984_107582715	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	531	Open in IMG/M
3300012582\|Ga0137358_10391250	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300012685\|Ga0137397_11156734	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300012918\|Ga0137396_10633844	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	790	Open in IMG/M
3300012922\|Ga0137394_10357073	Not Available	1247	Open in IMG/M
3300012925\|Ga0137419_10117866	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300012925\|Ga0137419_10569565	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300012925\|Ga0137419_11270184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	618	Open in IMG/M
3300012927\|Ga0137416_10679146	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300012944\|Ga0137410_10026044	All Organisms → cellular organisms → Bacteria	4059	Open in IMG/M
3300012944\|Ga0137410_10060405	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2725	Open in IMG/M
3300012972\|Ga0134077_10073391	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300014154\|Ga0134075_10169873	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	934	Open in IMG/M
3300015241\|Ga0137418_10190021	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300015245\|Ga0137409_10048231	All Organisms → cellular organisms → Bacteria	4055	Open in IMG/M
3300015245\|Ga0137409_10117144	All Organisms → cellular organisms → Bacteria	2457	Open in IMG/M
3300015251\|Ga0180070_1065445	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300015264\|Ga0137403_10352266	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300015358\|Ga0134089_10144319	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	936	Open in IMG/M
3300015358\|Ga0134089_10160260	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	892	Open in IMG/M
3300015359\|Ga0134085_10454054	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300017654\|Ga0134069_1191225	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	696	Open in IMG/M
3300017657\|Ga0134074_1263471	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300017659\|Ga0134083_10394246	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300018031\|Ga0184634_10332218	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300018052\|Ga0184638_1266388	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300018054\|Ga0184621_10021345	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300018071\|Ga0184618_10000345	All Organisms → cellular organisms → Bacteria	10670	Open in IMG/M
3300018071\|Ga0184618_10000345	All Organisms → cellular organisms → Bacteria	10670	Open in IMG/M
3300018468\|Ga0066662_11263484	Not Available	753	Open in IMG/M
3300018482\|Ga0066669_11208840	Not Available	682	Open in IMG/M
3300019882\|Ga0193713_1007364	All Organisms → cellular organisms → Bacteria → Proteobacteria	3399	Open in IMG/M
3300019886\|Ga0193727_1086363	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300019997\|Ga0193711_1013982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1010	Open in IMG/M
3300020004\|Ga0193755_1006268	All Organisms → cellular organisms → Bacteria	3850	Open in IMG/M
3300021086\|Ga0179596_10588209	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	565	Open in IMG/M
3300022534\|Ga0224452_1031997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. RIT-PI-q	1520	Open in IMG/M
3300022694\|Ga0222623_10081439	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300022756\|Ga0222622_10725781	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300025910\|Ga0207684_11050404	Not Available	680	Open in IMG/M
3300025910\|Ga0207684_11068236	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300025922\|Ga0207646_10073756	All Organisms → cellular organisms → Bacteria	3048	Open in IMG/M
3300025922\|Ga0207646_10202349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter → Dehalobacter sp. 12DCB1	1794	Open in IMG/M
3300026285\|Ga0209438_1192665	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300026296\|Ga0209235_1220549	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	615	Open in IMG/M
3300026298\|Ga0209236_1155451	Not Available	957	Open in IMG/M
3300026318\|Ga0209471_1126284	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300026538\|Ga0209056_10040507	All Organisms → cellular organisms → Bacteria	4279	Open in IMG/M
3300026538\|Ga0209056_10270058	Not Available	1196	Open in IMG/M
3300026538\|Ga0209056_10612787	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300027573\|Ga0208454_1009230	Not Available	2535	Open in IMG/M
3300027671\|Ga0209588_1110958	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300027846\|Ga0209180_10334613	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300027882\|Ga0209590_10549577	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300027909\|Ga0209382_12138604	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300028814\|Ga0307302_10004193	All Organisms → cellular organisms → Bacteria	6383	Open in IMG/M
3300028884\|Ga0307308_10176943	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1022	Open in IMG/M
3300030997\|Ga0073997_11648492	Not Available	634	Open in IMG/M
3300031231\|Ga0170824_111417461	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300032180\|Ga0307471_100191424	All Organisms → cellular organisms → Bacteria	2033	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.62%
Host-Associated	Host-Associated	9.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.77%
Plants	Host-Associated → Plants	9.38%
Aquatic	Environmental → Aquatic	8.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.38%
Sediment	Environmental → Aquatic → Sediment	8.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.85%
Loam	Environmental → Terrestrial → Soil → Loam	8.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.52%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	37.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.25%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.04%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.52%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015251	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293_16_10D	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300019998	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25384J37096_101030891	3300002561	Grasslands Soil	VVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA
Ga0066674_101215781	3300005166	Soil	VVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKA
Ga0066672_100592442	3300005167	Soil	VRYRFGDNAELMGAWESARNVAGPFNTTNAPQSGAEAGGSETPKAA*
Ga0066683_101026451	3300005172	Soil	RYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0066683_101026454	3300005172	Soil	VRTRLLDKVVRYRFGDNAELMGAWESARNASLRSARRVAGPFNTTNEPQSGAGGSETKAA
Ga0066683_105086901	3300005172	Soil	YRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSTTPKAA*
Ga0066683_109182891	3300005172	Soil	DKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0066673_102594073	3300005175	Soil	LLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGPGGSETPKAA*
Ga0066673_103778001	3300005175	Soil	YRFGDNAELMGAWESARNVAEPGPFNTTNEPQSGADGSATPKAA*
Ga0066679_102280951	3300005176	Soil	KVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNAPQSGAEAGGSETPKAA*
Ga0066685_111672701	3300005180	Soil	LMGAWESARNASLRSARRVAGSFQTKNEPESGAGGSETPKAA*
Ga0066678_108515652	3300005181	Soil	MQGVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVASFQTKNEPESGAGGSETLREAQGRAPKAA*
Ga0066676_107080182	3300005186	Soil	VRTRLLDKVVRYRFGDNAELMGVWESARNASLRSARRVAGPFNTTNEPQSGAGGSETKAA
Ga0070700_1010412172	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VFRGTADLKAVASDISQQLRLLDKVVRYRFGDNPELMGAWESARDVAGPFKSKNEPQSEAGGSEAPKAA*
Ga0070694_1004076022	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LLDKVVRYRFGGNAELMGAWESARNVAEPARPFNTTNEPQSGAGGSETPKAA*
Ga0066689_101869041	3300005447	Soil	LKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNASLRSARRVAGPFNTTNEPQSGAGGSETPKAA*
Ga0066682_100396622	3300005450	Soil	LLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0066682_103178104	3300005450	Soil	DNAELMGAWESARNASLRSARRVAGPFNTTNEPQSGAGGSETKAA*
Ga0070706_1013251871	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KAVAADINKQVRLLDKVVRYRFGDNPELMGAWESARDVVGPFKSKNEPEPGTGAGGTETPKAA*
Ga0070706_1014549042	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VVRYRFGGNAELMGAWESARNVAGGRPFRTTNQPQSGAGGSEAPKAA*
Ga0070707_1013974422	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GGNAELMGAWESARNVAGSFQTKNEPQTPAGGGETPKAA*
Ga0070699_1006746511	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGGGPVGTTNEPQSGAGGSETPKAA*
Ga0070699_1020222551	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	YRFGGNAELMGAWESARNVAGGGPLSTTNQPQSGAGHSEAPKAA*
Ga0070697_1000592641	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LKAVAADISKQLRLLDKVVRYRFGGNAELMGAWESARNVAGSFQTKNEPQTPAGGGETPKAA*
Ga0070697_1003428733	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LKAVAADISKQLRLLDKVVRYRFGGNAELMGAWESARNVAGGRPFRTTNQPQSGAGGSEAPKAA*
Ga0070695_1006807422	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VRTRLLDKVVRYRFGDNAELMGAWESARNASLRSARRVAGSFQTKNESQSGAGGSETPKAA*
Ga0066692_105026701	3300005555	Soil	ADLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGVGGSETPKAA*
Ga0066704_100548041	3300005557	Soil	RLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPQSGAGGSETPKAA*
Ga0066698_108193161	3300005558	Soil	VVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0066699_103324043	3300005561	Soil	LLSRNEDIGDNAELMGAWESARNVAGSFQTKNESQSGAGGSETPKAA*
Ga0066702_101401731	3300005575	Soil	LLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNAPQSGAEAGGSETPKAA*
Ga0066651_102160534	3300006031	Soil	YRFGDNAELMGAWESARNASLRSARRVAGPFNTTNEPQSGAGGSETKAA*
Ga0066656_110605512	3300006034	Soil	LLDKVVRYRFGDNAELMGAWESARSVAGSFQTKNEPESGAGGSETPKAA*
Ga0066656_111446121	3300006034	Soil	GGRGGQGVRTRLLDKVVRYQFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSEAPKAA
Ga0066652_1009940021	3300006046	Soil	VGHRSSRCYAISKQLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSE
Ga0070715_110821871	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VAAEISKQVRLLDKVVRYRFGDNAELMGAWESARNVAGSFQAKNEPESGAGGSETPKAA*
Ga0066653_101863493	3300006791	Soil	LLDKVAGIGSGNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0066659_101654433	3300006797	Soil	MQGVAADISKQLRLLDKVVRYRFGDNAELMGEWESARNVAGSFPTKNEPQSGAGGSETPKAA*
Ga0066659_116272262	3300006797	Soil	RADLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNESQSGAGGSETPKAA*
Ga0075428_1026107022	3300006844	Populus Rhizosphere	AELMGAWESARNVAGSFQTKSESQSEAGGSETPKAA*
Ga0075421_1012190282	3300006845	Populus Rhizosphere	LLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNESQSGAGGSETPKAA*
Ga0075425_10002603612	3300006854	Populus Rhizosphere	VDLQAVAAEISKQVRLLDKVVRYRFGDNAELMGAWESARNVSDPARPFNTTNEPQAGAGGSETPKAA*
Ga0075425_1000547053	3300006854	Populus Rhizosphere	VRTRLLDKVVRYRFGDNAELMGAWESARNVAGLFQTKNESQSGAGGNETPKAA*
Ga0075425_1022694831	3300006854	Populus Rhizosphere	MEAVLMGAWESARNVAGGGAVGTTKQPQSGAGASETPKAA*
Ga0075434_1000145382	3300006871	Populus Rhizosphere	LLDKVVRYRFGDNAELMGAWESARNVAGLFQTKNESQSGAGGNETPKAA*
Ga0075426_102479091	3300006903	Populus Rhizosphere	FGDNAELMGAWESARNVAGSFQTKNEPEPGAGGSETPKAA*
Ga0075426_102638101	3300006903	Populus Rhizosphere	LLDKVVRYRFGDNAELMGAWESARNVAGGGPVGTTNQPQSGAGGSETPKAA*
Ga0075426_105387941	3300006903	Populus Rhizosphere	FGDNAELMGAWESARNVADPARPFNTTNEPQSGAGGSETPKAA*
Ga0075436_1001490283	3300006914	Populus Rhizosphere	EISKQVRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPEPGAGGSETPKAA*
Ga0075436_1006574831	3300006914	Populus Rhizosphere	KQVRLLDKVVRYRFGDNAELMGAWESARNVADPARPFNTTNEPQSGAGGSEAPKAA*
Ga0075435_10000822612	3300007076	Populus Rhizosphere	AEISKQVRLLDKVVRYRFGDNAELMGAWESARNVADPARPFNTTNEPQSGAGGSETPKAA
Ga0099791_103835912	3300007255	Vadose Zone Soil	VVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSIQTKNEPESGAGGSATPKAA
Ga0099793_106362121	3300007258	Vadose Zone Soil	ADLKVVATDVSKQLRLLDKVVRYRFGDNAELMGAWESARNVGGPFNTTNAPQSGAGAGGSETPKAA*
Ga0099794_102459461	3300007265	Vadose Zone Soil	LLDRVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0066710_1001526751	3300009012	Grasslands Soil	VRTRLLDKVVRYRFGDNAELMGAWESARSVAGSFQTKNEPESGAGGSETPKAA
Ga0066710_1012535971	3300009012	Grasslands Soil	NAELMGAWESARNVAGSFQTKNESQFGAGGSETPKAAGWRR
Ga0066710_1016888942	3300009012	Grasslands Soil	VVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETLREAQGRPPKAA
Ga0066710_1029865831	3300009012	Grasslands Soil	DISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA
Ga0099829_100159201	3300009038	Vadose Zone Soil	DNAELMGAWESARNVAGSFQTKNEPESGAGGGETPKAA*
Ga0099828_100092461	3300009089	Vadose Zone Soil	ISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGGETPKAA*
Ga0099828_105710062	3300009089	Vadose Zone Soil	VVRYRFGDNAELMGAWESARNVAGGGPFNTTNAPQSGAGGSATPKAA*
Ga0099827_107437331	3300009090	Vadose Zone Soil	KVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSATPKAA*
Ga0099827_107565202	3300009090	Vadose Zone Soil	MQGVAAKNDASPVRGHAAISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGGGPFNTTNEPQSGAGGSATPKAA*
Ga0075418_114622471	3300009100	Populus Rhizosphere	LLDKVVRFRLGDNAELMGAWESARNVAGPFETKNEPLSEAGGSETPKAA*
Ga0066709_1024335912	3300009137	Grasslands Soil	LDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0066709_1041775382	3300009137	Grasslands Soil	LLDKVVRYRFGDNAELMGAWESAHNVAGSFQTKNEPESGAGGSATPKAA*
Ga0099792_103874842	3300009143	Vadose Zone Soil	ELMAAWESARNVAGPFNTTNVPQAGAGGSETPKAA*
Ga0114129_100633551	3300009147	Populus Rhizosphere	AVAADISKQLRLLDKVVRYRFGGNAELMGAWESARNVAGSFQTKNEPQTPAGGGETPKAA
Ga0114129_105460423	3300009147	Populus Rhizosphere	KAVAADISKQLRLLDKVVRYRFGGNAELMGAWESARNVAGSLQTKNEPQTPAGGGETPKAA*
Ga0075423_115434902	3300009162	Populus Rhizosphere	GNAELMGAWESARNVAGSLQTKNEPQTPAGGGETPKAA*
Ga0105259_10624991	3300009597	Soil	VSDLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNAPQSGAGGRETPKAA*
Ga0105347_10723161	3300009609	Soil	RLLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNEPQSGAGGSETPKAA*
Ga0105252_100028354	3300009678	Soil	VSDLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNAPQSGAGGSETLREAQGRPPKAA*
Ga0134088_100937511	3300010304	Grasslands Soil	KVVRYQFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSEAPKEG*
Ga0134111_101313553	3300010329	Grasslands Soil	YRFGENAELMGAWESARDVAGPFKSTNEPQSGEGSSVAPKAA*
Ga0134063_100712842	3300010335	Grasslands Soil	LLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSAAPKAA*
Ga0134066_103601892	3300010364	Grasslands Soil	DKVVRYRFGDNAELMGAWESARNVAGGGPFQTKNEPESGAGGSETPKAA*
Ga0134126_105650521	3300010396	Terrestrial Soil	AVAADISKQLRLLDKVVRYRFGGNAELMGAWESARNVAGGRPFRTTNQPQSGAGGSEAPKAA*
Ga0134123_130953511	3300010403	Terrestrial Soil	VAAEISEQVRLMDKVVRYRFGDNPELMAAWESARNVTGPFKTKNEPQSGEGGSVTPKAA*
Ga0137423_10081653	3300011430	Soil	VAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNAPQSGAGGSETLREAQGRPPKAA*
Ga0137426_10083691	3300011435	Soil	VSDLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNAPQSGAGGSETLREAQGRPPK
Ga0137437_10013218	3300011442	Soil	VRTRLLDKVVHYRFGDNAELMGAWESAHNVTGPFHTTNEPQSGAGAGGSETPKAA*
Ga0137457_11445472	3300011443	Soil	LLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNAPQSGAGGSETPKAA*
Ga0137389_106489531	3300012096	Vadose Zone Soil	ADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPQAGAGGSETPKAA*
Ga0137388_110281471	3300012189	Vadose Zone Soil	GDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0137383_102394552	3300012199	Vadose Zone Soil	DISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSATPKAA*
Ga0137382_103600162	3300012200	Vadose Zone Soil	MRTRLLDKVVRYRFGDNAELMGAWESARNVAGGGPLNTTSEPQSGAGGSATPKAA*
Ga0137382_109147871	3300012200	Vadose Zone Soil	MDHWNPGPSFSKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSAAPKAA*
Ga0137365_100337944	3300012201	Vadose Zone Soil	VRSRLLDKVVRYRFGDNAELMGAWESARNASLRSARRVAGSFQTKNDPESGAGGSETPKAA*
Ga0137365_103391972	3300012201	Vadose Zone Soil	ARADLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0137399_105776932	3300012203	Vadose Zone Soil	RADLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNASLRSARRVAGPFNTTNEPQSGAGGCETPRAA*
Ga0137399_107475392	3300012203	Vadose Zone Soil	VRALAQDDKVVRYRFGDNAELMGAWESARNVPGSFQTKNESQSGAGGSATPKAA*
Ga0137399_111532971	3300012203	Vadose Zone Soil	ISEQLRLLDKVVRYRFGDNSELMGAWDSARNVAGPGAVKNVPEPGGSQTPKAA*
Ga0137399_112838332	3300012203	Vadose Zone Soil	RFGDNAELMGAWESARNVAGSFQTKNVPESGVGGSETPKAA*
Ga0137399_115832531	3300012203	Vadose Zone Soil	LKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFNSTNEPQSGAGGSETPKAA*
Ga0137374_104230702	3300012204	Vadose Zone Soil	DKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGNETPKAA*
Ga0137374_105835842	3300012204	Vadose Zone Soil	DKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSEAPKAA*
Ga0137362_103075063	3300012205	Vadose Zone Soil	SKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFNTTNAPQSGAGGSATPKAA*
Ga0137380_105991993	3300012206	Vadose Zone Soil	AADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSATPKAA*
Ga0137381_118064411	3300012207	Vadose Zone Soil	LRLLDKVVRYRFGDNPELMGAWDSARNVAGPFKTKNEPQSGAGGSQTPKAA*
Ga0137376_101452751	3300012208	Vadose Zone Soil	RLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0137376_108263562	3300012208	Vadose Zone Soil	YRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0137379_102425733	3300012209	Vadose Zone Soil	ARADLKVVAADISTQLRLLDKVVRYRFGDNAELMGAWESARNVPGPFNTTNAPQSGAGDATPKAA*
Ga0137379_103014021	3300012209	Vadose Zone Soil	LLDKVVRYRFGDNAELMGAWESARNLAGSFQTKNEPESGAGDSEAPKAA*
Ga0137378_102809352	3300012210	Vadose Zone Soil	YRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSATPKAA*
Ga0137377_109365002	3300012211	Vadose Zone Soil	GDNAELMGAWESARNLAGSFQTKNEPESGAGDSEAPKAA*
Ga0137377_114606081	3300012211	Vadose Zone Soil	EHVGARADLKAVAAEISKQLRLLDKVVRYRFGGNPELMGAWDSARNVAGPFKTKNEPQSGAGGSQTPKAA*
Ga0137370_106253162	3300012285	Vadose Zone Soil	VRTRLLDKVVRYRFGDNAELMGAWESARNASLRSARRVAGPFNTTNEPESGAGSSATPKAA*
Ga0137387_104784483	3300012349	Vadose Zone Soil	RFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0137372_101324194	3300012350	Vadose Zone Soil	DISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0137372_105329322	3300012350	Vadose Zone Soil	LLDKVVRYRFGDNAELMGAWESARNVAEPGPFNTTNEPQSGVGGSATPKAA*
Ga0137367_102429932	3300012353	Vadose Zone Soil	LLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGNETPKAA*
Ga0137367_112142351	3300012353	Vadose Zone Soil	TVASDISEQIRLLDKVVRYRMGDNAELMAAWDSARNVPGPFKTKNVPQADRGGSQTPKAA
Ga0137371_1001203111	3300012356	Vadose Zone Soil	VVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAP
Ga0137371_100145916	3300012356	Vadose Zone Soil	RLLDKVVRYRFGDNAELMGAWESARNASLRSARRVAGPFNTTNEPQSGAGGSEAPKAA*
Ga0137371_100370291	3300012356	Vadose Zone Soil	ISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNEPQSEAGGSETPKAA*
Ga0137371_103969651	3300012356	Vadose Zone Soil	ELMGAWESARNMAGSFQTKNEPESGAGGSEAPKAA*
Ga0137371_109046841	3300012356	Vadose Zone Soil	LLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGTETPKAA*
Ga0137384_113620082	3300012357	Vadose Zone Soil	LKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNASLRSARRVAGSFQTKNEPESGAGGSETPKAA*
Ga0137384_113789621	3300012357	Vadose Zone Soil	LLDKVVRYRFGDNAELIGAWESARKLAGSFNTTNEPQSGAGGSETPKAA*
Ga0137385_103145131	3300012359	Vadose Zone Soil	GAWESARNASLRSARRVAGSFQTKNEPESGAGGSETPKAA*
Ga0137375_102512654	3300012360	Vadose Zone Soil	RADLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSATPKAA*
Ga0137375_106122852	3300012360	Vadose Zone Soil	SPGGRGGQGVRTRLLDKVVRYRFGDNAELMGAWESARNASLRSARRVAGSFQTKNEPESGGGGSETKAA*
Ga0137375_110882871	3300012360	Vadose Zone Soil	VAADISKQLRLLDKVVRYRFGDNAELMGAWESARNASLRSARRVAGSFQTKTEPESGAGGSATPKAA*
Ga0137375_111570442	3300012360	Vadose Zone Soil	LMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0137360_102348992	3300012361	Vadose Zone Soil	LLDKVVRYRFGDNAELMGAWESARNVAEPGPFKTTNEPQSGAGGSETKAA*
Ga0137390_103567033	3300012363	Vadose Zone Soil	VRYRFGDNAELMGAWESARNVAGSFQTKNDPQSGAGGSATPKAA*
Ga0137390_110825531	3300012363	Vadose Zone Soil	SKQLRLLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNEPQSGAGGSETPKAA*
Ga0134047_12570092	3300012380	Grasslands Soil	DNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0134059_11447802	3300012402	Grasslands Soil	YRLGDNAELMGAWESARNVAGPFKAKNEPQSGAGGSATPKAA*
Ga0150984_1075827151	3300012469	Avena Fatua Rhizosphere	GDNAELMGAWESARNVAGPFNTTNEPQAEAGGSETPKAA*
Ga0137358_103912502	3300012582	Vadose Zone Soil	AADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNAPQSGAGGSETPKAA*
Ga0137397_111567342	3300012685	Vadose Zone Soil	RADLKVVAADISKQLRPLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNESQSGAGGTEAPKAA*
Ga0137396_106338442	3300012918	Vadose Zone Soil	LRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNVPESGVGGSETPKAA*
Ga0137394_103570733	3300012922	Vadose Zone Soil	GDNAELMGAWESARNVAGPFNTTNAPQSGAGGSEAPKAA*
Ga0137419_101178662	3300012925	Vadose Zone Soil	ARADLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVPGSFQTKNESQSGAGGSATPKAA*
Ga0137419_105695651	3300012925	Vadose Zone Soil	RAVRGHADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTTNEAQSGAGGSETPKAA*
Ga0137419_112701841	3300012925	Vadose Zone Soil	LLDKVVRYRFGDNAELMGAWESARNVAEPFNTTNQPQSGAGGSATPKAA*
Ga0137416_106791462	3300012927	Vadose Zone Soil	YRFGDNAELMGAWESARNVTGPFNTTNAPQSGAGGSATPKAA*
Ga0137410_100260441	3300012944	Vadose Zone Soil	ARADLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVVGSFNTTNAPQSGAGAGGSETPKAA*
Ga0137410_100604054	3300012944	Vadose Zone Soil	EVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVPGSFQTKNESQSGAGGSETPKAA*
Ga0134077_100733911	3300012972	Grasslands Soil	GDNAELMGAWESARNVAGSFQNKNEPESGAGGSETPKAA*
Ga0134075_101698731	3300014154	Grasslands Soil	KQLRLLDKVVRYRFGDNAELMGAWESARNVAGGGPFNTTSEPQSGAGGSATPKAA*
Ga0137418_101900214	3300015241	Vadose Zone Soil	DKVVRYRFGDNAELMGAWESARNVPGPFNTTNAPQSGAGAGGSETPKAA*
Ga0137409_100482314	3300015245	Vadose Zone Soil	ADLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVVGSFNTTNAPQSGAGAGGSETPKAA*
Ga0137409_101171442	3300015245	Vadose Zone Soil	ADLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVPGSFQTKNESQSGAGGSATPKAA*
Ga0180070_10654452	3300015251	Soil	LLDKVVRYRFGDSAELMGAWESARNVAGSVQTKDEPETGAGGSGTPKAA*
Ga0137403_103522662	3300015264	Vadose Zone Soil	VRLRLLDKVVGYRFGDNAELMGAWESARNVAGSFQTKNEPQSGAGGSATPKAA*
Ga0134089_101443191	3300015358	Grasslands Soil	LLDKVVRYRFGDNAELMGAWESARNVAEPGPFNTTNEPQSGAGGSATPKAA*
Ga0134089_101602601	3300015358	Grasslands Soil	AELMGAWESARSVAGSFQTKNEPESGAGGSAAPKAA*
Ga0134085_104540542	3300015359	Grasslands Soil	LKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA*
Ga0134069_11912252	3300017654	Grasslands Soil	VVRYRFGDNAERMGAWESARNVAGSFQTKNVPESGAGGSETPKAA
Ga0134074_12634711	3300017657	Grasslands Soil	LLDKVVRYRFGDNAELMGAWESAGNVAGSFQTKNEPESGAGGSETPKAA
Ga0134083_103942461	3300017659	Grasslands Soil	SKQLRLLDKVVRYRFGDNAELMGAWESARNASLRSARRVAGSFQTKNEPESGAGGSETPKAA
Ga0184634_103322181	3300018031	Groundwater Sediment	RLLDKVVRYRFGDSAELMGAWESARNVAGSFQTKNESQSGAGGSETPKAA
Ga0184638_12663881	3300018052	Groundwater Sediment	DISKQLRLVDKVVRYRFGDNAELMGAWESARNPSLRSGQVVAGPFNTTNEPQSGAGAGGSETPKAA
Ga0184621_100213452	3300018054	Groundwater Sediment	VRTRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPQSGAGGSETPKAA
Ga0184618_100003451	3300018071	Groundwater Sediment	LDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSAAPKAA
Ga0184618_100003454	3300018071	Groundwater Sediment	VRTRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETLREAQGRPPKA
Ga0066662_112634841	3300018468	Grasslands Soil	ELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA
Ga0066669_112088401	3300018482	Grasslands Soil	DRFGDNAELMGAWESARNASLRSARRVAGPFNTTNEPQSGAGGSGTKAA
Ga0193713_10073644	3300019882	Soil	LLDKVVRYRFGDNAELMGAWESARNPSLRSGQVVAGPFNTTNEPQSGAGGSETPKAA
Ga0193727_10056813	3300019886	Soil	VRTRLLDRVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGVGGSETHPVVRSSSMVATTIDAAES
Ga0193727_10863632	3300019886	Soil	VVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNEPQSGAGGSETPKAA
Ga0193711_10139822	3300019997	Soil	LLDRVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGVGGSETHPVVRS
Ga0193710_10103212	3300019998	Soil	LLDRVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGVGGSETHPVVRSSSMVATTIDAAES
Ga0193755_10062681	3300020004	Soil	LLDNVVRYRFGDNAELMGAWESARNPSLRSGQVVAGPFNTTNAPQSGAGGSETPKAA
Ga0179596_105882092	3300021086	Vadose Zone Soil	YRFGDNAELMGAWESARNVAGPFNTTNEPQTGAGGSETPKAA
Ga0224452_10319972	3300022534	Groundwater Sediment	LLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA
Ga0222623_100814392	3300022694	Groundwater Sediment	RLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPQSGAGGSETPKAA
Ga0222622_107257811	3300022756	Groundwater Sediment	LLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPQSGAGGSETPKAA
Ga0207684_110504042	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	FGGNAELMGAWESARNVAGSFQTKNEPQTPAGGGETPKAA
Ga0207684_110682361	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RVDLKAVAADINKQVRLLDKVVRYRFGDNPELMGAWESARDVVGPFKSKNEPEPGTGAGGTETPKAA
Ga0207646_100737566	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AADISKQLRLLDKVVRYRFGGNAELMGAWESARNVAGGGPVGTTNQPQSGAGGSETPKAA
Ga0207646_102023493	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AELMGAWESARNVAGSFQTKNEPQTPAGGGETPKAA
Ga0209438_11926651	3300026285	Grasslands Soil	VVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVPGSFQTKNESQSGAGGSETPKAA
Ga0209235_12205492	3300026296	Grasslands Soil	ISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPQSGAGGSATPKAA
Ga0209236_11554512	3300026298	Grasslands Soil	MQGVAADISKQLRLLDKVVRYRFGDNAELMGEWESARNVAGSFQTKNEPQSGAGGSETPKAA
Ga0209471_11262842	3300026318	Soil	ELMGAWESARNVGGPFNTTNAPQSGAGAGGSETPKAA
Ga0209056_100405071	3300026538	Soil	VGARADLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESAPNVAGSFQTTNEPESGAGGSETPKAA
Ga0209056_102700582	3300026538	Soil	SARPNWNPGPSSSQQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA
Ga0209056_106127872	3300026538	Soil	RGGQGVRTHLLDKVVRYRFGDNAELMGAWESARNASLCSAQRVAGPFNTTNEPQSGAGDSGTPKAA
Ga0208454_10092301	3300027573	Soil	VSDLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGPFNTTNAPQSGAGGSETLREAQGRPPKAA
Ga0209588_11109581	3300027671	Vadose Zone Soil	LLDKVVRYRLGDNPELMGAWDSARNVAGPFKTNNEPQSGAGGSETPKAA
Ga0209180_103346131	3300027846	Vadose Zone Soil	ADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGSFQTKNEPESGAGGSETPKAA
Ga0209590_105495772	3300027882	Vadose Zone Soil	ADISKQLRLLDNVVRYRFGDNAELMGAWESARNVAGGGPFNTTNEPQSGAGGSATPKAA
Ga0209382_121386041	3300027909	Populus Rhizosphere	VRRSRGLAAEISKQLRLLDKVVHYRFGDNAELMGAWASARNVAGPFDTKNEPQAEAGGSEAPKAA
Ga0307302_100041931	3300028814	Soil	DNAELMGAWESARNVVGGGPFQTKNEPESGAGGSETPKAA
Ga0307308_101769431	3300028884	Soil	DLKVVAADISKQLRLLDKVVRYRFGDNAELMGAWESARNVAGGGPFQTKNEPESGAGGSETPKAA
Ga0073997_116484921	3300030997	Soil	MRAWKSARNVAGGPFNTTNAPQSGAGGAGGSETPKAA
Ga0170824_1114174612	3300031231	Forest Soil	AELMGAWESARNVAGSFQTKNESQSGAGGSETPKAA
Ga0307471_1001914241	3300032180	Hardwood Forest Soil	KAVAADISKQLRLLDKVVRYRFGGNAELMGAWESARNVAGGGPVSATNQPQSGAGGSETPKAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F028323

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences