Metagenome / Metatranscriptome Family F028934

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F028934
Family Type	Metagenome / Metatranscriptome
Number of Sequences	190
Average Sequence Length	51 residues
Representative Sequence	LIIPLIIQTIGLDPSGAVWTDGASNVSRLDPSGAVQVDAEHPSRNRKV
Number of Associated Samples	120
Number of Associated Scaffolds	190

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.84 %
% of genes near scaffold ends (potentially truncated)	70.00 %
% of genes from short scaffolds (< 2000 bps)	87.37 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.895 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.895 % of family members)
Environment Ontology (ENVO)	Unclassified (33.158 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.211 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.37% β-sheet: 0.00% Coil/Unstructured: 77.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 190 Family Scaffolds
PF00196	GerE	1.58
PF00583	Acetyltransf_1	1.58
PF02195	ParBc	1.58
PF03372	Exo_endo_phos	1.58
PF03861	ANTAR	1.58
PF03631	Virul_fac_BrkB	1.58
PF13683	rve_3	1.58
PF06441	EHN	1.05
PF00211	Guanylate_cyc	1.05
PF00589	Phage_integrase	1.05
PF01408	GFO_IDH_MocA	1.05
PF10011	DUF2254	1.05
PF13546	DDE_5	1.05
PF05552	TM_helix	1.05
PF13487	HD_5	1.05
PF00881	Nitroreductase	1.05
PF01370	Epimerase	1.05
PF01895	PhoU	0.53
PF13738	Pyr_redox_3	0.53
PF00082	Peptidase_S8	0.53
PF14329	DUF4386	0.53
PF13358	DDE_3	0.53
PF11716	MDMPI_N	0.53
PF01872	RibD_C	0.53
PF05534	HicB	0.53
PF02687	FtsX	0.53
PF12974	Phosphonate-bd	0.53
PF13340	DUF4096	0.53
PF12697	Abhydrolase_6	0.53
PF13676	TIR_2	0.53
PF14026	DUF4242	0.53
PF01544	CorA	0.53
PF05960	DUF885	0.53
PF02861	Clp_N	0.53
PF00171	Aldedh	0.53
PF01545	Cation_efflux	0.53
PF12867	DinB_2	0.53
PF07366	SnoaL	0.53
PF03466	LysR_substrate	0.53
PF03793	PASTA	0.53
PF07885	Ion_trans_2	0.53
PF02789	Peptidase_M17_N	0.53
PF13191	AAA_16	0.53
PF04255	DUF433	0.53
PF03583	LIP	0.53
PF17132	Glyco_hydro_106	0.53
PF01384	PHO4	0.53
PF08281	Sigma70_r4_2	0.53
PF12680	SnoaL_2	0.53
PF13792	Obsolete Pfam Family	0.53
PF13610	DDE_Tnp_IS240	0.53
PF00491	Arginase	0.53
PF00365	PFK	0.53
PF06742	DUF1214	0.53
PF01636	APH	0.53
PF13545	HTH_Crp_2	0.53
PF00027	cNMP_binding	0.53
PF01966	HD	0.53
PF00145	DNA_methylase	0.53
PF13701	DDE_Tnp_1_4	0.53
PF13302	Acetyltransf_3	0.53
PF02698	DUF218	0.53
PF00872	Transposase_mut	0.53
PF00005	ABC_tran	0.53

COG ID	Name	Functional Category	% Frequency in 190 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.58
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	1.58
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.05
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.05
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.05
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.05
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.53
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.53
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.53
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.53
COG0260	Leucyl aminopeptidase	Amino acid transport and metabolism [E]	0.53
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.53
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.53
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.53
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.53
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.53
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.53
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.53
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.53
COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	Defense mechanisms [V]	0.53
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.53
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.53
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.53
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.53
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.53
COG4226	Predicted nuclease of the RNAse H fold, HicB family	General function prediction only [R]	0.53
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.53
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.53
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.53
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.95 %
Unclassified	root	N/A	41.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.95 %
Unclassified	root	N/A	41.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.89 %
Unclassified	root	N/A	41.05 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.05 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	44.21 %
Unclassified	root	N/A	41.05 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.05 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.05 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.05 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.05 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	1.05 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.53 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.05 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.68 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.58 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	1.05 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.05 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.05 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.53 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.53 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.53 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.05 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	3.16 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.16 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.58 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.05 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.05 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.05 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	0.53 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	0.53 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.53 %
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	0.53 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.53 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.53 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	0.53 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.53 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.53 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.53 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.16 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.16 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.05 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.05 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.05 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.53 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.53 %
unclassified Euzebyales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales	0.53 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.53 %
Methanomicrobiaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae	0.53 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.53 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.53 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.53 %
Nitriliruptoraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae	0.53 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.53 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.53 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.53 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.53 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.16 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.58 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.05 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1.05 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.05 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.53 %
Euzebyales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	0.53 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	0.53 %
Methanofollis	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanofollis	0.53 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.53 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.53 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.53 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.53 %
Nitriliruptor	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor	0.53 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.53 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.53 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.53 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.53 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.53 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.53 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.53 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.16 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	1.05 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.05 %
Micromonospora globispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora globispora	0.53 %
Actinoplanes siamensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes siamensis	0.53 %
Phytohabitans rumicis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	0.53 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.53 %
unclassified Kutzneria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria	0.53 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.53 %
Actinoplanes hotanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes hotanensis	0.53 %
Micromonospora cremea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora cremea	0.53 %
Saccharopolyspora endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora endophytica	0.53 %
Nitriliruptor alkaliphilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus	0.53 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.53 %
Euzebyales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	0.53 %
Methanofollis	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanofollis	0.53 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.53 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.53 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.53 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.53 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.53 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.53 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.53 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.53 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.16 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.05 %
Conexibacter sp. DBS9H8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	0.53 %
Micromonospora sp. A3M-1-15	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. A3M-1-15	0.53 %
Conexibacter sp. S30A1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	0.53 %
Kutzneria sp. CA-103260	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria → Kutzneria sp. CA-103260	0.53 %
Micromonospora globispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora globispora	0.53 %
Actinoplanes siamensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes siamensis	0.53 %
Phytohabitans rumicis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	0.53 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.53 %
Actinoplanes hotanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes hotanensis	0.53 %
Micromonospora cremea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora cremea	0.53 %
Saccharopolyspora endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora endophytica	0.53 %
Nitriliruptor alkaliphilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus	0.53 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.53 %
Euzebyales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	0.53 %
Methanofollis	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanofollis	0.53 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.53 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.53 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.53 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.53 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.53 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.53 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.53 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.53 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.53 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig822768	Not Available	887	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig849812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300000559\|F14TC_103189381	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	510	Open in IMG/M
3300000890\|JGI11643J12802_12193649	Not Available	715	Open in IMG/M
3300000891\|JGI10214J12806_10191102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656	Open in IMG/M
3300000956\|JGI10216J12902_124262841	Not Available	566	Open in IMG/M
3300001431\|F14TB_100242299	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300002899\|JGIcombinedJ43975_10103457	Not Available	523	Open in IMG/M
3300003373\|JGI25407J50210_10033196	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300003373\|JGI25407J50210_10068587	Not Available	886	Open in IMG/M
3300004463\|Ga0063356_103561550	Not Available	671	Open in IMG/M
3300004479\|Ga0062595_102542521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	512	Open in IMG/M
3300005562\|Ga0058697_10127881	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300005562\|Ga0058697_10159582	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300005562\|Ga0058697_10267019	Not Available	804	Open in IMG/M
3300005562\|Ga0058697_10314546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300005562\|Ga0058697_10416018	Not Available	670	Open in IMG/M
3300005562\|Ga0058697_10645695	Not Available	557	Open in IMG/M
3300005562\|Ga0058697_10726751	Not Available	531	Open in IMG/M
3300005562\|Ga0058697_10834201	Not Available	501	Open in IMG/M
3300005719\|Ga0068861_100318887	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1353	Open in IMG/M
3300005981\|Ga0081538_10059065	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2219	Open in IMG/M
3300005981\|Ga0081538_10066358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2024	Open in IMG/M
3300005981\|Ga0081538_10255862	Not Available	664	Open in IMG/M
3300005985\|Ga0081539_10028616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3500	Open in IMG/M
3300005985\|Ga0081539_10057921	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300006049\|Ga0075417_10271072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	817	Open in IMG/M
3300006169\|Ga0082029_1168138	Not Available	523	Open in IMG/M
3300006169\|Ga0082029_1447417	Not Available	631	Open in IMG/M
3300006196\|Ga0075422_10326239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300006844\|Ga0075428_100577220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1201	Open in IMG/M
3300006844\|Ga0075428_101960648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	607	Open in IMG/M
3300006845\|Ga0075421_102155945	Not Available	589	Open in IMG/M
3300006847\|Ga0075431_101969731	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300007076\|Ga0075435_100617156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	941	Open in IMG/M
3300009094\|Ga0111539_10594210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1289	Open in IMG/M
3300009147\|Ga0114129_10421654	Not Available	1755	Open in IMG/M
3300009156\|Ga0111538_10381646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1784	Open in IMG/M
3300009157\|Ga0105092_10889726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525	Open in IMG/M
3300009168\|Ga0105104_10602718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	625	Open in IMG/M
3300009789\|Ga0126307_10093285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2381	Open in IMG/M
3300009789\|Ga0126307_10246230	Not Available	1437	Open in IMG/M
3300009803\|Ga0105065_1025109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300009807\|Ga0105061_1005358	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1531	Open in IMG/M
3300009811\|Ga0105084_1035038	Not Available	866	Open in IMG/M
3300009811\|Ga0105084_1055161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300009814\|Ga0105082_1005797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora endophytica	1638	Open in IMG/M
3300009836\|Ga0105068_1015589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1263	Open in IMG/M
3300009840\|Ga0126313_10065673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2598	Open in IMG/M
3300009840\|Ga0126313_10089167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2249	Open in IMG/M
3300009840\|Ga0126313_10112261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus	2019	Open in IMG/M
3300009840\|Ga0126313_10910695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300010036\|Ga0126305_10623269	Not Available	726	Open in IMG/M
3300010040\|Ga0126308_10648682	Not Available	723	Open in IMG/M
3300010041\|Ga0126312_10059319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	2571	Open in IMG/M
3300010041\|Ga0126312_10088513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2106	Open in IMG/M
3300010041\|Ga0126312_10167467	Not Available	1530	Open in IMG/M
3300010041\|Ga0126312_10183056	Not Available	1461	Open in IMG/M
3300010042\|Ga0126314_10033297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	3243	Open in IMG/M
3300010042\|Ga0126314_10494339	Not Available	888	Open in IMG/M
3300010042\|Ga0126314_10538607	Not Available	849	Open in IMG/M
3300010042\|Ga0126314_11195959	Not Available	568	Open in IMG/M
3300010042\|Ga0126314_11532222	All Organisms → cellular organisms → Bacteria → Terrabacteria group	500	Open in IMG/M
3300010044\|Ga0126310_11104539	Not Available	631	Open in IMG/M
3300010045\|Ga0126311_10158919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1617	Open in IMG/M
3300010145\|Ga0126321_1454753	Not Available	912	Open in IMG/M
3300010166\|Ga0126306_10615287	Not Available	866	Open in IMG/M
3300010999\|Ga0138505_100007241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria → Kutzneria sp. CA-103260	1204	Open in IMG/M
3300011000\|Ga0138513_100004187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1554	Open in IMG/M
3300011000\|Ga0138513_100014112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1039	Open in IMG/M
3300011003\|Ga0138514_100079991	Not Available	693	Open in IMG/M
3300012021\|Ga0120192_10010034	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300012360\|Ga0137375_10884955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes hotanensis	710	Open in IMG/M
3300012360\|Ga0137375_11235676	Not Available	569	Open in IMG/M
3300012937\|Ga0162653_100069889	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	565	Open in IMG/M
3300014487\|Ga0182000_10222145	Not Available	738	Open in IMG/M
3300014487\|Ga0182000_10532185	Not Available	553	Open in IMG/M
3300014487\|Ga0182000_10642369	Not Available	517	Open in IMG/M
3300015371\|Ga0132258_12086131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1425	Open in IMG/M
3300015371\|Ga0132258_12516315	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300018054\|Ga0184621_10336685	Not Available	530	Open in IMG/M
3300018061\|Ga0184619_10077872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1469	Open in IMG/M
3300018061\|Ga0184619_10406319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300018066\|Ga0184617_1197638	Not Available	599	Open in IMG/M
3300018071\|Ga0184618_10080091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1248	Open in IMG/M
3300018072\|Ga0184635_10045633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1684	Open in IMG/M
3300018076\|Ga0184609_10022140	All Organisms → cellular organisms → Bacteria	2530	Open in IMG/M
3300018081\|Ga0184625_10350668	Not Available	767	Open in IMG/M
3300018081\|Ga0184625_10498727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora cremea	615	Open in IMG/M
3300018422\|Ga0190265_10055000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3498	Open in IMG/M
3300018465\|Ga0190269_11886640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300018476\|Ga0190274_10127339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2095	Open in IMG/M
3300018476\|Ga0190274_11326703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	807	Open in IMG/M
3300019767\|Ga0190267_11126094	Not Available	567	Open in IMG/M
3300019767\|Ga0190267_11579384	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanofollis	511	Open in IMG/M
3300019867\|Ga0193704_1009056	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1992	Open in IMG/M
3300019875\|Ga0193701_1075545	Not Available	659	Open in IMG/M
3300021078\|Ga0210381_10013469	Not Available	2040	Open in IMG/M
3300021510\|Ga0222621_1059270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	805	Open in IMG/M
3300022756\|Ga0222622_10068135	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300022756\|Ga0222622_11100722	Not Available	584	Open in IMG/M
3300026644\|Ga0208352_100336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. A3M-1-15	606	Open in IMG/M
3300026652\|Ga0208713_101395	Not Available	612	Open in IMG/M
3300026670\|Ga0208216_100342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1617	Open in IMG/M
3300026673\|Ga0208847_101022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	804	Open in IMG/M
3300026704\|Ga0208581_101785	Not Available	953	Open in IMG/M
3300027324\|Ga0209845_1051961	Not Available	644	Open in IMG/M
3300027379\|Ga0209842_1060958	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300027490\|Ga0209899_1006244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2735	Open in IMG/M
3300027718\|Ga0209795_10081181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	941	Open in IMG/M
3300027718\|Ga0209795_10172929	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300027873\|Ga0209814_10000227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17423	Open in IMG/M
3300027907\|Ga0207428_10281753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1234	Open in IMG/M
3300027952\|Ga0209889_1018849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	1589	Open in IMG/M
3300028704\|Ga0307321_1076762	Not Available	659	Open in IMG/M
3300028705\|Ga0307276_10028241	Not Available	1148	Open in IMG/M
3300028705\|Ga0307276_10108952	Not Available	676	Open in IMG/M
3300028708\|Ga0307295_10042294	Not Available	1163	Open in IMG/M
3300028710\|Ga0307322_10045789	Not Available	1059	Open in IMG/M
3300028716\|Ga0307311_10036924	Not Available	1272	Open in IMG/M
3300028719\|Ga0307301_10280040	Not Available	546	Open in IMG/M
3300028720\|Ga0307317_10031841	Not Available	1649	Open in IMG/M
3300028721\|Ga0307315_10123304	Not Available	775	Open in IMG/M
3300028744\|Ga0307318_10033341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1682	Open in IMG/M
3300028744\|Ga0307318_10149371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	801	Open in IMG/M
3300028744\|Ga0307318_10212495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	670	Open in IMG/M
3300028744\|Ga0307318_10255831	Not Available	610	Open in IMG/M
3300028744\|Ga0307318_10259907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes siamensis	605	Open in IMG/M
3300028771\|Ga0307320_10027474	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300028771\|Ga0307320_10042181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1676	Open in IMG/M
3300028771\|Ga0307320_10060346	Not Available	1408	Open in IMG/M
3300028771\|Ga0307320_10123572	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300028771\|Ga0307320_10296712	Not Available	641	Open in IMG/M
3300028782\|Ga0307306_10210869	Not Available	559	Open in IMG/M
3300028787\|Ga0307323_10032719	Not Available	1808	Open in IMG/M
3300028787\|Ga0307323_10091678	Not Available	1087	Open in IMG/M
3300028791\|Ga0307290_10024875	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300028796\|Ga0307287_10047801	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300028796\|Ga0307287_10342009	Not Available	564	Open in IMG/M
3300028796\|Ga0307287_10381834	Not Available	530	Open in IMG/M
3300028799\|Ga0307284_10220833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	748	Open in IMG/M
3300028811\|Ga0307292_10121414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1040	Open in IMG/M
3300028811\|Ga0307292_10470792	Not Available	537	Open in IMG/M
3300028811\|Ga0307292_10513352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300028814\|Ga0307302_10015497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3426	Open in IMG/M
3300028814\|Ga0307302_10623327	Not Available	536	Open in IMG/M
3300028819\|Ga0307296_10740774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300028828\|Ga0307312_10505088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	798	Open in IMG/M
3300028828\|Ga0307312_10517659	Not Available	788	Open in IMG/M
3300028875\|Ga0307289_10337447	Not Available	620	Open in IMG/M
3300028875\|Ga0307289_10408676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	558	Open in IMG/M
3300028876\|Ga0307286_10067758	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300028876\|Ga0307286_10085255	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1099	Open in IMG/M
3300028876\|Ga0307286_10109078	Not Available	976	Open in IMG/M
3300028878\|Ga0307278_10001230	All Organisms → cellular organisms → Bacteria	12759	Open in IMG/M
3300028878\|Ga0307278_10069740	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300028878\|Ga0307278_10236342	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300028881\|Ga0307277_10400677	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300028881\|Ga0307277_10531173	Not Available	528	Open in IMG/M
3300028889\|Ga0247827_10430562	Not Available	809	Open in IMG/M
3300030336\|Ga0247826_10497861	Not Available	920	Open in IMG/M
3300030496\|Ga0268240_10073879	Not Available	766	Open in IMG/M
3300030496\|Ga0268240_10160980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	558	Open in IMG/M
3300030499\|Ga0268259_10036488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	965	Open in IMG/M
3300030510\|Ga0268243_1140011	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300030510\|Ga0268243_1191561	Not Available	507	Open in IMG/M
3300030516\|Ga0268255_10084665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	968	Open in IMG/M
3300031548\|Ga0307408_101112507	All Organisms → cellular organisms → Bacteria → Nitrospirae	733	Open in IMG/M
3300031731\|Ga0307405_10125973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1761	Open in IMG/M
3300031731\|Ga0307405_10525149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	953	Open in IMG/M
3300031731\|Ga0307405_10607827	Not Available	893	Open in IMG/M
3300031824\|Ga0307413_10436554	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1035	Open in IMG/M
3300031852\|Ga0307410_11507255	Not Available	592	Open in IMG/M
3300031901\|Ga0307406_10116971	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300031903\|Ga0307407_10071037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2071	Open in IMG/M
3300031903\|Ga0307407_11241398	Not Available	583	Open in IMG/M
3300031911\|Ga0307412_11552438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300031995\|Ga0307409_100453616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1238	Open in IMG/M
3300031995\|Ga0307409_101896610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300031996\|Ga0308176_11755647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300032002\|Ga0307416_100069766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora globispora	2910	Open in IMG/M
3300032002\|Ga0307416_101161484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300032002\|Ga0307416_101672583	Not Available	741	Open in IMG/M
3300032002\|Ga0307416_102938823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	570	Open in IMG/M
3300032005\|Ga0307411_11365705	Not Available	647	Open in IMG/M
3300032126\|Ga0307415_100120432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1967	Open in IMG/M
3300032126\|Ga0307415_102187819	Not Available	541	Open in IMG/M
3300032159\|Ga0268251_10128194	Not Available	935	Open in IMG/M
3300032159\|Ga0268251_10423627	Not Available	581	Open in IMG/M
3300033550\|Ga0247829_10698344	All Organisms → cellular organisms → Bacteria → Terrabacteria group	845	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.53%
Host-Associated	Host-Associated	29.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.11%
Plants	Host-Associated → Plants	29.47%
Aquatic	Environmental → Aquatic	8.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.32%
Phylloplane	Host-Associated → Plants → Phylloplane	6.84%
Sediment	Environmental → Aquatic → Sediment	6.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.16%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.63%
Roots	Host-Associated → Plants → Roots	2.63%
Freshwater	Environmental → Aquatic → Freshwater	2.11%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.32%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	6.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.32%
Sand	Environmental → Terrestrial → Soil → Sand	5.26%
Loam	Environmental → Terrestrial → Soil → Loam	3.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.05%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.53%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.32%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	6.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.32%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.26%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.63%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	2.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.11%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.05%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.53%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	10.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.00%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	6.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.32%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.21%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.63%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.11%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.58%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.05%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.05%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.05%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.05%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.53%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.53%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.53%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.53%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.53%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026644	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1118 (SPAdes)	Environmental	Open in IMG/M
3300026652	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1117 (SPAdes)	Environmental	Open in IMG/M
3300026670	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1111 (SPAdes)	Environmental	Open in IMG/M
3300026673	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1116 (SPAdes)	Environmental	Open in IMG/M
3300026704	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized - NN606 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_12272280	2124908045	Soil	MIIQTILLDPSGAVWTDEASNVSRPDPSGADQVDAEHPTRNRKVVGS
KansclcFeb2_13105760	2124908045	Soil	LIIRLIIQTILLDPSGAVWTDRASNVSRLDPSGAVQADGEHPSRNRKVVGS
F14TC_1031893812	3300000559	Soil	IIQTIGLDPSRAVWTDAASNLSSLDPSGAIQIDAELSTRNRKVVGSNPTSGST*
JGI11643J12802_121936491	3300000890	Soil	LIIPMIIQTILLDPCGAVWTDGPSNVSRPDPSGADQIDAENPTRNRKVEVECCVGPEGRR
JGI10214J12806_101911022	3300000891	Soil	MIIQTVGLDPSGSVWTDEASNVSRPDPSGAVQADAEHPARNRKVVGSNPTSGSKT
JGI10216J12902_1242628412	3300000956	Soil	AIRLFIGCALIIPVIIQTILLDPSGAIWTDGPPDVSRLDLSGAVQIDAEHPTRNRKVAGSNPKSG*
F14TB_1002422991	3300001431	Soil	MIIQTILLDPTGAVWTDKASNVSSPDPSGADQADAEHPSRKRKVEVRAR
JGIcombinedJ43975_101034572	3300002899	Soil	LIIQTILLDPTGAVWTDEASNVSRLDPSGADQIDAEHPSRNRKVVGSNPTSGL*
JGI25407J50210_100331963	3300003373	Tabebuia Heterophylla Rhizosphere	LIIPMIIQTILLYPSGAVWTDAASNVSSLDPPGAGWVDAEHPSRNRKVEGAAAA*
JGI25407J50210_100685872	3300003373	Tabebuia Heterophylla Rhizosphere	QTIRLDPSGAIWIDGPPDVSRLDPSGAVQIDAQHPTRNRKVEGSNPSSGSTAL*
Ga0063356_1035615502	3300004463	Arabidopsis Thaliana Rhizosphere	LIIRLIIQTIGLYPSGAVWTDGASNVSRPDPSAAIQADAEHPSRNRK
Ga0062595_1025425211	3300004479	Soil	MRLIIQTIGLDPSGAVWTDGASNLSRIDPSGADQIDAEHPSRNRK
Ga0058697_101278812	3300005562	Agave	LIIPMIIQTILLDPSGAVWTDEASNLSRPDRSGADQIDAEHPTS*
Ga0058697_101595821	3300005562	Agave	MIIQSILLYPSRAIWTDEASNVSRLDPSGADQVDAKHPTHNR
Ga0058697_102670192	3300005562	Agave	LIIPMIIQTILLYPSGAVWTDEASNLSSLDPSGAIQADAKHPTRNRLAMAAA*
Ga0058697_103145462	3300005562	Agave	LIIRLIIQTILLDPSGAVWTDGASNVSSPDPSGADQADAEHPTRNRKVEGSNPSSGSKQ*
Ga0058697_104160181	3300005562	Agave	LIIPLIIQTIGLDPSGAVWTDAACNVSRLDPSGTDQVDAKHPTHNRKVDGSSAGSGL*
Ga0058697_106456951	3300005562	Agave	LIIPLIIQSILLDPSRAVWTDEASSVSRLDPSGADQIDAEHPTRNRKV
Ga0058697_107267511	3300005562	Agave	MIIQTISLYPSGAVWTDEAPNVSRPDPSGADQAGAEHPSRNWKVEGATAV*
Ga0058697_108342012	3300005562	Agave	LIIPMIIQSILLDPTGAVWTDEASNVSRPDPSGAVQVDAEHPSRNRKVVG
Ga0068861_1003188872	3300005719	Switchgrass Rhizosphere	LIIHLIIQTILLDPSGAIWTDGPSNVSRLDPSGAVQVDAENPSRNRKVGFESDRDFKE*
Ga0081538_100590654	3300005981	Tabebuia Heterophylla Rhizosphere	LIIQTIGLDPSGAVWTDAASNVSRLDPSGAIPTDAEHPTRNRKVEGAAAA*
Ga0081538_100663584	3300005981	Tabebuia Heterophylla Rhizosphere	MIIQTIGLDPSGAVWTDEASNVSRLDPSGAYWVDAEHPVS*
Ga0081538_102558621	3300005981	Tabebuia Heterophylla Rhizosphere	LIIHLIIQTIRLDPSGAVWTETASNVSRLDPSGADQIDAEHSTRNRKIEASILLGP*
Ga0081539_100286163	3300005985	Tabebuia Heterophylla Rhizosphere	MIIQTILLYPSRAVWIDEAPNVSRLDPSGAVQVDAEHGS*
Ga0081539_100579213	3300005985	Tabebuia Heterophylla Rhizosphere	MIIQTILLNPSGAVWTDEAPNVSRPDPTEAVQIDAEHVS*
Ga0075417_102710722	3300006049	Populus Rhizosphere	LIIPMIIQTIGLDPSGAVCTDRASNVSRPDPSGAVQIDAEHPVS*
Ga0082029_11681381	3300006169	Termite Nest	LIIQTIGLYPSGAVWIDEASNVSRFDPSGAVQVDAEHPE*
Ga0082029_14474171	3300006169	Termite Nest	CALIIPMIIQTIILYSSGAVWTDEAANVSSLDPSGVYWFDAEHPARNRKVGYVRFCKSLWI*
Ga0075422_103262391	3300006196	Populus Rhizosphere	LIIPMIIQTILLDPLGAVWTDEAPNVSGQIPSGAVQANAEHP
Ga0075428_1005772203	3300006844	Populus Rhizosphere	LIIPVIIQTIGLDPSRAVWTDGACNVSSLDPSGAIQVDAEHDS*
Ga0075428_1019606481	3300006844	Populus Rhizosphere	LIIPMIIQTILLYPSGAVWTDDASHVSRLDPSGAVQIDAEHPTRNR
Ga0075421_1021559451	3300006845	Populus Rhizosphere	MIIQTILLDPSGAVWTDDASHVSRLDPSGAVQIDAEHPTRNRKV
Ga0075431_1019697312	3300006847	Populus Rhizosphere	LDPSRAVWTESASNLSSLDPSGAIQADAEHPTRNRKVVGESDRDFKE*
Ga0075435_1006171562	3300007076	Populus Rhizosphere	MRLIIPMIIQTIGPDPSGAVWTDEAPNVSRPDPSGANQ
Ga0111539_105942101	3300009094	Populus Rhizosphere	MRLIIPMIIQTIGLDPSRAVWTESASNLSSLDPSGAIQIDAEHPSRN
Ga0114129_104216542	3300009147	Populus Rhizosphere	LIIPMIIQTILLDPSGAVWTDDASHVSRLDPSGAVQIDAEHPTRNRKVAG
Ga0111538_103816462	3300009156	Populus Rhizosphere	MIIQTILLYPSGAVWTDDASHVSRLDPSGAVQIDAEHPSR
Ga0105092_108897262	3300009157	Freshwater Sediment	LIIPMIIQTILLDPSGAVWTDEASNVSRPDPSGAIQVDAEHPSRNRLLAAQGRG
Ga0105104_106027182	3300009168	Freshwater Sediment	LIIPMIIQTILLDPSEAVWTDIASDVSRPDPSGVNQSDVEH
Ga0126307_100932851	3300009789	Serpentine Soil	LIIPMIIQTIRLDPSGAVWTDSASNVSRLDPFGADQIDANHPTRNRKVEG
Ga0126307_102462303	3300009789	Serpentine Soil	LIIHLIIQTILLDPSGAVWTDAAANVSRLDPSGAIQADAEHPSRNRKVV
Ga0105065_10251092	3300009803	Groundwater Sand	LIIRLIIQTILLDPSRPVWIDNVSSVSRLDPSGSVWFDAEHPSRNRKVIATVRERCV*
Ga0105061_10053581	3300009807	Groundwater Sand	LIIPMIIQSILLDPSGAVWTDGPSNVSRLDPSGAVQIDAEHPSR
Ga0105084_10350381	3300009811	Groundwater Sand	LIIPLIIQTIGLDPSGAVWTDGASNVSRLDPSGAVQVDAEHPSRNRKV
Ga0105084_10551612	3300009811	Groundwater Sand	LIIHLIIHLIIQTILLDPSGAIWTDKPSNVSRPDPSGADQIDAEHPSRNRMVVLASSQ
Ga0105082_10057972	3300009814	Groundwater Sand	LIIRLIIQTILLDPSRPVWIDNVSSVSRLDPSGSVWFDAEHPSRNRVIAIA*
Ga0105068_10155891	3300009836	Groundwater Sand	LIIPMIIQTILLDPSGAVWTDEASNVSRPDPSGSVQVDAEHPARNRKGVGSNPTSG
Ga0126313_100656731	3300009840	Serpentine Soil	ALIIPMIIQTILLYPSGAIRTDEASNVSRLDPSGAV*
Ga0126313_100891671	3300009840	Serpentine Soil	LIIHLIIQTILLYPSGAVWTDGPSNVSRLDPSGAYRVDAEHPSRNRKVE
Ga0126313_101122613	3300009840	Serpentine Soil	MIIQTILLYPSGAVWTDEAPNVSSLDPSGADQADAEIPTRNRKVVGSNPTLKLQATENTLRG*
Ga0126313_109106952	3300009840	Serpentine Soil	LPCHPRLVVCALIIHLIIQTIGLDPSGAVRTDKASNVSRLDPSGAVQIDAERPSRNRE
Ga0126305_106232693	3300010036	Serpentine Soil	LIIQTILLYPSGAVWTDGASNLSRLDPSGADQIDAEHPTNNRKVE
Ga0126308_106486821	3300010040	Serpentine Soil	MPLIIRLIIQTILLYPSRAVWTDGASNVSRLVPSGAIQIDANHPTRNRKVEGSNRCAG
Ga0126312_100593191	3300010041	Serpentine Soil	LIIRLIIQMILLDPSGAIWTDEASNVSRLDPSGAVQADAEHPSRNRKVVDFLGPDQWDQ*
Ga0126312_100885131	3300010041	Serpentine Soil	LIIPMIIQTIGLDPSGAIWTDDAPNVSRLDPSGAVQADAKHPTRNRKV
Ga0126312_101674671	3300010041	Serpentine Soil	LIIHLIIQTIGLDPSGAVWTDAASNMSRLDPSGAVQGDAKHPTRNRKVAGRLSGKDA
Ga0126312_101830562	3300010041	Serpentine Soil	LIIPMIIQTILLYPSGAVWTDEPPNVSRLDPSGAVQVDAEHPTRNRKLPA*
Ga0126314_100332972	3300010042	Serpentine Soil	MIIQTIPLYPSGAVWTDEAPNVSSLDPSGADQADAEIPTRNRKIVGSNPTLKLQATENTLRG*
Ga0126314_104943391	3300010042	Serpentine Soil	LIIRLIIQTIGLDPSGPVWTNEASNVSRLDPSGAVQVDAEHPSRNRKVEGSTP
Ga0126314_105386072	3300010042	Serpentine Soil	LIIHLIIQTILLYLSGAVWTDDAAHVSRLDPSGAIQADAEHPSRNRKVVGSNPTLGSKAAGQTAY
Ga0126314_111959591	3300010042	Serpentine Soil	LIIRLIIQTILLDPSGAIWTDEAPNVSRLDPSGAVQADAEHPSRNRKVVDFLGP
Ga0126314_115322222	3300010042	Serpentine Soil	VGCALIIPMIIQTIGLDPSGAIWTDDAPNVSRLDPSGAVQADAKHPTRNRKVFFLP*
Ga0126310_111045391	3300010044	Serpentine Soil	LIIQTIGLYPSGAVWTDEASTVSRLDPSGAVQVDAEHPSRNRKVVGWNPTLTSN
Ga0126311_101589192	3300010045	Serpentine Soil	LIIRLIIQTIGLDPTGAVWTDEPSNVSRLDPSGADQIDAEHPSRNRKVVGSNPTLT*
Ga0126321_14547532	3300010145	Soil	MIIQTIGLDPSGAVWTDRPPNVSRLDPSLAIQVDAEHPTRNRKVVGSNPT
Ga0126306_106152872	3300010166	Serpentine Soil	LIIRLIIQTILLDPSGAVWTDEGPNVSRPDPSGAVQIDAEHPSRNRKVVGSNP
Ga0138505_1000072411	3300010999	Soil	MIIQAIRLYPSGAVWTDEAGNVSRVDPSGAVQIDAEHPSRNR
Ga0138513_1000041873	3300011000	Soil	LIIRLIIQTIRRDPSGSVQIDEASNLSRPDPSGTDQIDAEHPSRNRKVVGSNQTSGSISAGQST
Ga0138513_1000141123	3300011000	Soil	MIIQTIPLDPSRAVWTDSPSNVSRPGPFGAVQIDAEHQAT
Ga0138514_1000799912	3300011003	Soil	MIIQTILLDPSGAIWTDEAPNVSRLDPSGAIWSDAEHP
Ga0120192_100100342	3300012021	Terrestrial	MIIQTILLDPSGAVWTDEAANVSRVDLSGAIQADAEQEYQA*
Ga0137375_108849552	3300012360	Vadose Zone Soil	LPCYPLSVGCALIISLIIQSILLDPLGAVWTDGAFNVSRLDPSGAVQVDAEHPARNRKVGLRLVVETPRLE*
Ga0137375_112356762	3300012360	Vadose Zone Soil	IPMIIQTILLYPSGAVWTDDAGNVSRPEPSPAVQSDAEHPSRNRKVEASNPDRPALPLDYRR*
Ga0162653_1000698891	3300012937	Soil	MIIQTILLDPSGAVWTDDAAHVSRLDPSGADQIDAKHPTRNRKVE
Ga0182000_102221451	3300014487	Soil	MRLILPMIIQTTLLDPTRAVWTDEASNVSRPHPSGAVQIDLEY*
Ga0182000_105321852	3300014487	Soil	MRLIIPMIIQTIGLYPSGAVWTDGPPNMSRLDPFGAVQADAEHPTRNRKVKGS
Ga0182000_106423691	3300014487	Soil	LIIHLIIQTIGLDPSRAVWTDEASNVSRLDPSGAIQADAEHPTRNRKVVGSNPTSGSKTAGQRNF*
Ga0132258_120861312	3300015371	Arabidopsis Rhizosphere	LIIRLIIQTILLYPSGAVWTDGPSNVSRLDPSGAVQTDAEHPSRNRKVEGSNPSSGSKQ*
Ga0132258_125163152	3300015371	Arabidopsis Rhizosphere	MCLILPMIIQTTLLDPTGAVWTDEVSNVSRPHPSGAVQIDLEY*
Ga0184621_103366851	3300018054	Groundwater Sediment	LIIQTIRRDRSGSVWIDEASNLSRPDPSGADQIDAEHPTRNRKVDDRSAVTVISG
Ga0184619_100778721	3300018061	Groundwater Sediment	PMIIQTIRLDPVWTDGAANVSRQDPSGADQIDAEHPSGNRKVVGSNPTSGSILHSSRGIKQDEHS
Ga0184619_104063191	3300018061	Groundwater Sediment	MRLIIPMIIQTIGLDPSRAVWTESASNLSSLDPSGADQADAEHPARN
Ga0184617_11976382	3300018066	Groundwater Sediment	LIIRLIIRLIIQSILLDPSGAVWTDEASNVSRPDPSGAVQID
Ga0184618_100800912	3300018071	Groundwater Sediment	MRLIIPMIIQTIGLDPSRAVWTESASNLSSLDPSGADQGDAEHPARNRKGGTTPDQTTADLL
Ga0184635_100456332	3300018072	Groundwater Sediment	LIIHLIIQTILLYPSGAVWTDDAAHVSRLDPSGADQIDANHPTRNRKVVGSNPTSGSISAGQSM
Ga0184609_100221404	3300018076	Groundwater Sediment	MRLIIPMIIQTILLYPSGAVWTESASNLSSLDPSGAIQIDAEHPSRNRKVVGSNRSPVRA
Ga0184625_103506681	3300018081	Groundwater Sediment	LIIHLIIQTIRLDPSRAVWTDGASNVSSLDPSGAIPTDAEHPS
Ga0184625_104987271	3300018081	Groundwater Sediment	LIIQPILLDPSGAVWTDEAPNVSRLDPSGAVQVDAEHP
Ga0190265_100550002	3300018422	Soil	MRLIIPMIIQTIGLDPFRAVWTESASNLSSLDPSGAIQIDAEHPSRNRKVVGSNPTSGFT
Ga0190269_118866401	3300018465	Soil	LIIRLIIQTILLYPSGAVWTDGPSNVSRLDPSGAVQADAEHPSRNRK
Ga0190274_101273393	3300018476	Soil	LIIQLIIQTIGLDPSGAIWTDEASNMSSLDPSGAVQIDAEHPSRNRKVVGSNPS
Ga0190274_113267031	3300018476	Soil	MRLDHPLIIQTILLHPSGAVWTDDASHVSRLDPSGADQIDAEHPSRNRNVARSPWCFAG
Ga0190267_111260941	3300019767	Soil	MRLIIQTIGLDPSGAVWTDGASDLSRIDPSGADQIDAEHPSRNRKVVGSNPTLGFPGLHD
Ga0190267_115793841	3300019767	Soil	LIIQTILLYPSGAVWTDEASNVRRPDPSGAVQIDAEHPSR
Ga0193704_10090563	3300019867	Soil	MIIPTILLYPSGAIRTDEPSNLSRLDQSGAVQTDAEH
Ga0193701_10755451	3300019875	Soil	MRLIIPMIIQTIGLDPFRAVWTEGASNLSRPDPSGADQIDAEP
Ga0210381_100134692	3300021078	Groundwater Sediment	MIIQTILLDPSGAVWTDEAGNVSRLDPSGADQVDANHPTRNRLLAA
Ga0222621_10592701	3300021510	Groundwater Sediment	LIIRLIIQTILLYPSGAVWTDGPSNVSRLDPSGAVQIDAEHPTRNR
Ga0222622_100681354	3300022756	Groundwater Sediment	LIIPMIIQTILLYPSGALWTDDASNVSRPDRSGADQIDAEH
Ga0222622_111007221	3300022756	Groundwater Sediment	LIIPMIIQTIRLLPSGAVWTDGASNVSSLDPTGAVQADAEHPARNRKVVGSNPTSGSISAVHRAFLES
Ga0208352_1003361	3300026644	Soil	LIIHLIIQTILLYPSGAVWTDDAAHVSRLDPSGADQIDAEHQATD
Ga0208713_1013951	3300026652	Soil	LIISMIILTVGRDRSGAVWTDGAGKVSRLDPSGAVQADAEHPTPNRKV
Ga0208216_1003421	3300026670	Soil	MIIQTILLDPSRAVWTDRASNVSRLDPSGADQADAEHPTRHRKVA
Ga0208847_1010222	3300026673	Soil	LIIRLIIQTIGLYPSGAVWTESASNVSRLDPSGADQTDANHPTRNRK
Ga0208581_1017852	3300026704	Soil	VIIPMIIQTILLDPSGAVWTDGVSNVSRPGPSGADQADAEHPTRNRKVVGSNPA
Ga0209845_10519612	3300027324	Groundwater Sand	LIIRLIIQTILLDPSRPVWIDNVSSVSRLDPSGSVWFDAEHPSRNRVIAIA
Ga0209842_10609581	3300027379	Groundwater Sand	MIIQTILLDPSGAVWTDEASNVSRPDPSGSVQVDAEHPARNRKVVGSNPTSGSTNQQVRA
Ga0209899_10062441	3300027490	Groundwater Sand	LIIPMIIQTILLDPSGAVWTDEASNVSRPDPSGSVQVDAEHPARNRKGVGSNPTSGSTN
Ga0209795_100811812	3300027718	Agave	MIIQTIGLDPSGAVWTDGAGKVSRLDPSGAVQADAEHPTPNRKVDGSDATS
Ga0209795_101729292	3300027718	Agave	MIIQTIGLDPSGAVWTDEAPHVSRLDPSGADQIDAEHPTHNRKV
Ga0209814_1000022714	3300027873	Populus Rhizosphere	LIIPMIIQTILLYPSGAVWTDDASHVSSLDPSGAVQIDAEHPSRNRKVLGPNPTSGVTPPRPPRQ
Ga0207428_102817532	3300027907	Populus Rhizosphere	MRLIIPMIIQTIGLDPSRAVWTESASNLSSLDLSGAIQADAEHPTRNRKVVGSNPIAT
Ga0209889_10188491	3300027952	Groundwater Sand	MIIQTILLDPTGAVQTDEASNVSRLDPSGAVQVDAEHPARNRKVP
Ga0307321_10767622	3300028704	Soil	MIIQTIGLDPSRAVWSDSTSNLSRLDPSGADQADAEH
Ga0307276_100282411	3300028705	Soil	LIIPMIIQRIGLYSPGAVWTDEALNVSWLDRSGADQFNAEHPARNRKVEGSNSSSGASS
Ga0307276_101089521	3300028705	Soil	LIIRLIIQSILLDPSGAVWTDEASNVSSPDPSGAV
Ga0307295_100422941	3300028708	Soil	MIIQRIGLYSPGAVWTDEALNVSWLDRSGADQFNAEHPARNRKVEGSN
Ga0307322_100457891	3300028710	Soil	LIIHLIIQTILLYPSRALWTDEAPNVSRLDPSGADQIDAEHPSRNRKVVGSRSQSTV
Ga0307311_100369242	3300028716	Soil	LIIPMIIQTIRLDPSGALWTDEAPNVSRLDPSGADQIDAEHPSRNRKVVGSRSQSTV
Ga0307301_102800401	3300028719	Soil	MIIQTILLDPSGAIWTDAASNVSRLDPSRAVQIDAEHPSRNRKVEGSNPSSGSKTAG
Ga0307317_100318413	3300028720	Soil	ILLYPSRALWTDEAPNVSRLDPSGADQIDAEHPSRNRKVVGSNPTSGSP
Ga0307315_101233042	3300028721	Soil	MIIQTILLYPSGAVWTDEAGNVSRLDPSEADQGDAEHPSRNRKIVGSSPPAG
Ga0307318_100333413	3300028744	Soil	MIIQTILLDPTGAVWTDEAPNVSRLDPSGADQIDAEHPSRNRKVVGSNPTSGST
Ga0307318_101493711	3300028744	Soil	MRLIIPMIIQTILLDPSGAVWTESASNLSRLDPSGADQIDAEHPARNRKGECSNPSSGCTTPDQSTADLL
Ga0307318_102124952	3300028744	Soil	LIIPMIIQTILLDPSEAVWTDRPSNVSSLDPSGAVQVDAEHPSRNWKVVGSNPTSGSKPQ
Ga0307318_102558312	3300028744	Soil	MIIQTIILDPSGAVWTDEPSNVSRLDRSGAVQIDAEHPSRNRKVAG
Ga0307318_102599071	3300028744	Soil	MIIQTILLYPSGAVWTDEAGNVSRVDPSGAVQIDAEHPSRNRKVEGSNPSSGSKTA
Ga0307320_100274741	3300028771	Soil	MIIQRIGLYSPGAVWTDEALNVSWLDRSGADQFNAEHPARNRKVEGSNSSSGASS
Ga0307320_100421811	3300028771	Soil	HLIIQTILLYPSRALWTDEAPNVSRLDPSGADQIDAEHPSRNRKVVGSRSQSTV
Ga0307320_100603461	3300028771	Soil	IIRLIIQTIRRDPSGSDQIDEASNLSRPDPSGADQINAQHPSRNRKVEGSGSAT
Ga0307320_101235721	3300028771	Soil	LIIRLIIQTILLYPSGAVWTDGPANVSRLDPSGAVQIDAEH
Ga0307320_102967121	3300028771	Soil	MIIQTIGLEPSGAVWTDEASNVSSPDPSGAVQVDANHPTR
Ga0307306_102108692	3300028782	Soil	IRLINQTILLYPSGAVWTDSASDVSRLDPSGAVQVDAEHAARNRRVA
Ga0307323_100327193	3300028787	Soil	LIIQTILLYPSRALWTDEAPNVSRLDPSGADQIDAEH
Ga0307323_100916782	3300028787	Soil	MIIQTIRLDPSGALWTDEAPNVSRLDPSGADQIDAEHPSRNRKVVGSRSQSTV
Ga0307290_100248751	3300028791	Soil	LIIRLIIQTILLYPSGAVWTDGPANVSRLDPSGAVQIDAEHP
Ga0307287_100478011	3300028796	Soil	MRLIIPMIIQTIGLDPSRAVWTESASNLSRPDPSGTDQIDAEYPSRNRKVVGSNPTSG
Ga0307287_103420092	3300028796	Soil	LIILMIIQSIRRLPSEAVWTDEAPNVSRPDPSGADQIDAEHPSR
Ga0307287_103818341	3300028796	Soil	LIIPMIIQTIRLDPSGAVWTDGASNVSRLDPSGAVQIDAEHPSRHRKV
Ga0307284_102208331	3300028799	Soil	MIIQTILLYPSGAVWTDEAGNVSRLDPSRAVQIDAEHP
Ga0307292_101214142	3300028811	Soil	MIIQMIIQTIRRDPSGAVWTDGPSNVSRPDPSAAVQIDAEHPSRNPKVVGSNPT
Ga0307292_104707922	3300028811	Soil	MIIQTILLYPSGAVWTDEAGNVSRLDPSRAVQIDAEHPSRN
Ga0307292_105133521	3300028811	Soil	MIIQTILLYPSGAVWTDEAGNVSRLDPSEADQGDAEHPSRNRKVVGSNLTSCS
Ga0307302_100154971	3300028814	Soil	LIIRLIIQTIRLDPSGSYGIDEASNVSRPDPSGADQIDAEHPSRNRKVVGSNPTSGSK
Ga0307302_106233271	3300028814	Soil	SILKRMPLIIRLIIQTILLYPSRAVWTDEASNVSSLDPSGAVQIDAEHPSRNRKVVG
Ga0307296_107407741	3300028819	Soil	LIILMIIQSIRRLPSEAVWTDEAPNVSRPDPSGADQIDAEHPSRNRKVVDTSLPRH
Ga0307312_105050881	3300028828	Soil	CIGCALIILMIIQSIRRLPSEAVWTDEAPNVSRPDPSGADQIDAEHPSRNRKVVDTSLPR
Ga0307312_105176592	3300028828	Soil	LIIHLIIQTIGLDPSGALWTDEAPNVSRLDPSGADQIDAEHPSRNRKVVGSRSQSTV
Ga0307289_103374471	3300028875	Soil	LIIRLIIQTIRLYPFGAVWTDKAGNVSRPDPSGADQIDANHPTRNREVVGSNPTSGSKTA
Ga0307289_104086762	3300028875	Soil	LIIQTIRRDPSGSDQIDEASNLSRPDPSGADQINAQHPSRNRKVEVS
Ga0307286_100677581	3300028876	Soil	LIIPLIIQTIPLDPSGSVWTDEASNMSRPDPSGADQIDAEHPSRSRKVVGSNPTSG
Ga0307286_100852552	3300028876	Soil	MIIPTILLYPSGAIRTDEPSNLSRLDQSGAVQTDAEHPSRTRTVVRFKAC
Ga0307286_101090783	3300028876	Soil	LIIPMIIQTIGLEPSGAVWTDEASNVSSPDPSGAVQVDANHPTRNRKVVGWNPTLTSRMERLALRAR
Ga0307278_100012302	3300028878	Soil	LIIPMIIQTILLYPSGAVWTDGPPNVSRQDPTSAVQADAEHPSRNRKVVGSNPTSGSTNPQLRTYL
Ga0307278_100697401	3300028878	Soil	LIIPMIIQTIRLEPSGSVWTDEASKLSRPDPSGADQIDAEHPSRNQKAG
Ga0307278_102363421	3300028878	Soil	LIISLIIQSILLDPLGAVWTDGAFNVSRLDPSGAVQVDAEHPARNRKVGLRLVVETPRLE
Ga0307277_104006771	3300028881	Soil	LIIPMIIQTILLYPSGAIWTDGASNVSRPDPSGAIQADAEHPTRNRKVVGSNPTSGSITAGQ
Ga0307277_105311732	3300028881	Soil	LIIQMIIQTIRLDPSGAVWTDGASNVSRLDPSGAVQVDVEHPSRRRKVAG
Ga0247827_104305623	3300028889	Soil	LIIHLIIQTIGLYPSGAVWTDDAAHVSRLDPSGADQIDAEHPARNRKVEGSNPSSGSKTAGRRPFLALP
Ga0247826_104978612	3300030336	Soil	MALDHPLIIQTILLDPMGAVWTDGASNLSRLDPSGAVQIDAEHPSRNR
Ga0268240_100738791	3300030496	Soil	MRFDHPMIIQTIGLDPSGALWTDEPSNVSRLDPPGADQIDAEHPSRNREVVGSNPTSGSILMPGAF
Ga0268240_101609801	3300030496	Soil	LIIPMIIQTIGLYPSGVVWTDDASHVRTLDPSGADQIDAEHPSRNRKVVGSNPISGVTSLQLRLG
Ga0268259_100364881	3300030499	Agave	MRLIIPMIIQTIGLEPSRAVWTESASNLSSLDLSGAVPADCEHPSRNRK
Ga0268243_11400111	3300030510	Soil	MRLILPMIIQTTLLDPTRAVWTDEASNVSRPHPSGAVQIDLEY
Ga0268243_11915611	3300030510	Soil	MRFDHPMIIQTIGLDPSGALWPDEPSNVSRLDPPGADQIDAEHPSRNRKVVGSSPTSGSILMPGAF
Ga0268255_100846652	3300030516	Agave	MIIQTIGLDPSGAVWTDGAGKVSRLDPSGAVQADAEHPTPNRKVDGSDATSAKKWNRLLF
Ga0307408_1011125072	3300031548	Rhizosphere	MIIQTIGLDPSGAVWTDNASNVSSLDPSGADQIDAEHPTRNRKVEGFESLLG
Ga0307405_101259731	3300031731	Rhizosphere	LIIPMIIRTILLDPTGAVWTDDAGNVSRLDPSGADHIDAEHPSRNRKVVSSNPTSGPICLVRGYQA
Ga0307405_105251492	3300031731	Rhizosphere	LIIPMIIQTILLDPTGAVQTDEAANVSRPDPTGADQIDAEHPSRNRKVEVPYSTLGHDMARPVRL
Ga0307405_106078272	3300031731	Rhizosphere	MRLIIPMIIQTILLDPSGAIRTDEASNVSRLDPSGAI
Ga0307413_104365542	3300031824	Rhizosphere	MIIQTIGLDPSGAVWTDNASNVSSLDPSGADQIDAEHPTRNRKVEGFESLLGLP
Ga0307410_115072551	3300031852	Rhizosphere	MIIRTILLDPTGAVWTDDAGNVSRLDPSGADHIDAEHPSRNRKVVSSNPT
Ga0307406_101169712	3300031901	Rhizosphere	LIIPMIIQTIGLDPSGAVWTDGAGNVSSLDPSGAVQADADHPTRNRKVAGSNPASGST
Ga0307407_100710373	3300031903	Rhizosphere	IQTIGLDPSGAVWTDGAGNVSSLDPSGAVQADADHPTRNRKVAGSNPASGST
Ga0307407_112413981	3300031903	Rhizosphere	LIVPRIIQTIGLNPPGAVWTDEVPNMSKLDPSAADQADAEHPTRKRKVVGSNPTSGSTNQ
Ga0307412_115524381	3300031911	Rhizosphere	LIIRLIIQTIGLDPSGAVWTDEASNVSRLDPSCAVQGDADHP
Ga0307409_1004536161	3300031995	Rhizosphere	LIIHLIIQTIGLDPSGAVRTDEAGNVSRLDPSGAVQVDAERP
Ga0307409_1018966101	3300031995	Rhizosphere	LIIRLIIQTILLDPSGAIRTDSASNVSRLDPSGAVKIDAEHPSRNRKVVDFLGPDQWDQ
Ga0308176_117556472	3300031996	Soil	LIIPLIIQSILLDPSRAVWTDEASDVSRLDLSGAVQIDAEHPSRNRKVVGSNPTLKLQATEDTLRG
Ga0307416_1000697661	3300032002	Rhizosphere	MIIQTILLDPSGAVWTDEAPNVSRPDRSGADQTDAEHQATDLAVAGSNPSRRAKRAGQR
Ga0307416_1011614842	3300032002	Rhizosphere	LIIRLIIQTILLDPSGAIRTDEASNVSRLDPSGAVKIDAEHPSRNRKVVDFLGPDQWDQ
Ga0307416_1016725832	3300032002	Rhizosphere	LIIPMIIQTILLDPSRAVWTDDPSNVSRPDPPGADQAD
Ga0307416_1029388231	3300032002	Rhizosphere	MIIQTILLYPSGAIWTDEPSNMSSPDPSGADQTDAEHQA
Ga0307411_113657052	3300032005	Rhizosphere	MSVGCALIIPMIIQTILLDPTGAVWTDGAPDVSRLDPSGADQADAEHPT
Ga0307415_1001204322	3300032126	Rhizosphere	LIIPMIIQTILLDPSEAVWTDGVSHLSSLDPSGAILADAEHPTRNRKVLLESDRDFKA
Ga0307415_1021878191	3300032126	Rhizosphere	LIIQTILLYPSGAIRTDEASNVSRLDPSGAVLSDAE
Ga0268251_101281942	3300032159	Agave	LIIPMIIQTILLYPSGAVWTDEASNLSSLDPSGAIQADAKHPTRNRLAMAAA
Ga0268251_104236271	3300032159	Agave	MRLDHPLIIQSILLDPLGAVWTDEVPSVSSLDPSGAVQADAEHPTRNRLNSRTS
Ga0247829_106983441	3300033550	Soil	LIIHLIIQTIGLYPSGAVWTDDAAHVSRLDPSGADQIDAEHPARNRKVEGSNPTQETPTGAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F028934

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences