NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F031072

Metagenome / Metatranscriptome Family F031072

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F031072
Family Type Metagenome / Metatranscriptome
Number of Sequences 183
Average Sequence Length 72 residues
Representative Sequence MQTISFPNPNPRTSPAGFSGSLNANNQGYSGSGRVTVGNENRNVFVQGQVGGGWSGRPSFGGMVGGQIRF
Number of Associated Samples 109
Number of Associated Scaffolds 183

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 21.86 %
% of genes from short scaffolds (< 2000 bps) 61.20 %
Associated GOLD sequencing projects 102
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (97.814 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(19.126 % of family members)
Environment Ontology (ENVO) Unclassified
(54.098 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(68.852 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 47.96%    Coil/Unstructured: 52.04%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MQTISFPNPNPRTSPAGFSGSLNANNQGYSGSGRVTVGNENRNVFVQGQVGGGWSGRPSFGGMVGGQIRFSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
97.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds



Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater
Freshwater
Freshwater Lake
Freshwater And Sediment
Freshwater
Freshwater, Plankton
Freshwater Lake
Freshwater Lake
Freshwater
Sediment
Marine Plankton
Freshwater
River Water
Freshwater
Deep Subsurface
Aqueous
Freshwater To Marine Saline Gradient
Marine
Estuarine
Estuarine Water
Sediment
Meromictic Pond
Soil
Deep Subsurface Sediment
Estuary
9.8%13.1%7.1%19.1%6.6%8.2%12.0%6.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
RCM31_1036678223300001851Marine PlanktonMSFEVVSVSPSSKNTQISFPNPNPRTSPAGFSGSFNANNGGWNGSGRITLGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF*
GOS2227_100232253300001950MarineMQPIRIPTPTSRPTLSGSINANNQGYSGSGRITVGNENRNLFLQGQVGGGWSGRPSLA
JGI24766J26685_1013211823300002161Freshwater And SedimentHLIANTMQTISIQNPNPRTSPAGFSGSANINNQGYSGSGRITVGNPNRNLFVEGQVGGGWSGRPSFGGMVGGQIRF*
B570J40625_100005752223300002835FreshwaterMQTISIPNPNPRTSPSGFSGSFNANNQGYSGAGRVTVGNENRNLFVQGQVGGGWSGRPSFGGMVGGQIRF*
B570J40625_10005513083300002835FreshwaterMQTIHFPNPNPRTSPAGFSGSLNANNQGYSGSGRVTIGNENRNLYLQGQVGGGWSGRPSFGGMVGGQIRF*
JGI25922J50271_10000009283300003413Freshwater LakeLTPTQSHILMQTLQFTNPNPRTSPAGFSGSFNANNQGYSGAGRVTIGNENRNLFVQGQVGGGWSGRPSVGGMVGGTIRF*
JGI25922J50271_10000051133300003413Freshwater LakeMQTIRISNPNPRTSPAGFSGSVNANNNGYSGSGRVTIGGPNRNAFVQGDINGGWSGRPSVGGMVGGTIRF*
JGI25922J50271_10000181173300003413Freshwater LakeMQTISFPNPNPRTSPAGFSGSFSANNQGYSGSGRVTVGNENRNLFLQGQVGGGWNSRPSFGGMVGGQIRF*
JGI25922J50271_1001273513300003413Freshwater LakeMQTIHIPNPNPRTSPAGFSGSFNANNQGYGGTGRVTVGGPNRSVFVEGQVNGGWSGRPSFGGMVGGTIRF*
JGI25926J51410_100670123300003490Freshwater LakeMQTIRIHNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGNANRNAFVQGQVSGGWNSRPSASVMAGGQIRF*
Ga0065166_1001076133300004112Freshwater LakeMQTIHIPNPNPRTSPAGFSGSFDANNNGYSGTGRVTVGGPNRSVWAEGQVSGGWSGRPSVGGMVGGTIRF*
Ga0066182_1006135623300004125Freshwater LakeMQRQTIRFPQRTSPAGVSGSLNANNQGFSGTGRVTVGNANRNAFVQGQISGGWNSRPSASVMAGGQIRF*
Ga0078894_1000523873300005662Freshwater LakeMQTISIPNPNPRTSPAGFSGSFNASNQGYSGSGRVTIGNENRNLYLQGQVGGGWSGRPSFGGMVGGQIRF*
Ga0078894_1012093233300005662Freshwater LakeMQTLQFTNPNPRTSPAGFSGSFNANNHGYSGTGRVTIGNENRNVFVQGQVGGSWSGGRPSVGGMVGGTIRF*
Ga0078894_1048317823300005662Freshwater LakeMQTISIPNPNPRTSPAGFSGSFNASNQGYSGSGRVTVGNENRNLYLQGQVGGGWSGRPSFGGMVGGQIRF*
Ga0075471_1011304023300006641AqueousMSFEVVSVSPSSKNTSISFPNPNPRTSPAGFSGSINANNGGWSGTGRITVGNENRNIFVQGQASGGWSGRPSFGGMVGGQIRF*
Ga0103959_119816113300007214Freshwater LakeSLTPMQTIRIPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGGPNRNVWAEGQINGGWSGRPNVGGMVGGTIRF*
Ga0103961_125690733300007216Freshwater LakeMQTIRIPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGGPNRNIWAEGQINGGWSGRPNVGGMVGGTIRF*
Ga0102917_106823523300007590EstuarineMQTISIPNPNPRTSPAGFSGSFNANNQGYSGSGRVTVGNENRNLFLQGQVGGGWSGRPSFGGMVGGQIRF*
Ga0108970_1074238423300008055EstuaryMQRQTLRFPPRTSPAGVSGSLNANNQGFSGSGRVTVGNENRNAFVQGQVGGGWSGRPSASVMVGGQIRF*
Ga0114340_121277223300008107Freshwater, PlanktonMQTIRIPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGGPNRNVWAEGQINGGWSGRPNVGGMVGGTIRF*
Ga0114341_1000938933300008108Freshwater, PlanktonMQTLQFTNPNPRTSPAGFSGSFDANNQGYSGTGRVTIGNENRHVFVQGQVGGGWSGGRPSLGGMVGGTIRF*
Ga0114341_1009832613300008108Freshwater, PlanktonIPNPNPRTSPAGVSGSFNANNQGFNGTGRVTVGGPNRNVWAEGQINGGWSGRPNVGGMVGGTIRF*
Ga0114341_1009904033300008108Freshwater, PlanktonMQTISFPNPNPRTSPAGFSGSFNANNHGYSGSGRVTVGNENRNLFIQGQVGGGWSGRPSFGGMVGGQIRF*
Ga0114341_1035789013300008108Freshwater, PlanktonMQTISIRNPTPHTPAPVFSGSATINNGGYSGSGRITVGSPNRNIFVEGQVGGGWSGRPSFGGMVGGQIRF*
Ga0114344_107992623300008111Freshwater, PlanktonTLSLSMQTIRIPNPNPRQSPAGFSGSFDANNHGYSGSGRVTVGGPNRSVFAEGQIGSGWSGRPSFGGMVGGTIRF*
Ga0114344_116913113300008111Freshwater, PlanktonMQTIRIPNPNPRTSPAGFSGSFNANNQGYSGTGRVTVGGPSRNVWAEGQVNGGWSGRPSVGGMVGGTLRF*
Ga0114346_102579713300008113Freshwater, PlanktonMQTLRFTNPNPRTSPAGFSGSFNAENRGWSGTGRVTVGGPNRNVWAEGQVSGGWSGGRPSVGVMV
Ga0114351_103494753300008117Freshwater, PlanktonMQTIHIPNPNPRTSPAGFSGSVNANNNGYSGSGRVTIGSPNRHVFVQGDINGGWSGRPSVGGMVGGTIRF*
Ga0114351_110700733300008117Freshwater, PlanktonMQTIRIPNPNPRTSPAGSSGSFNANNQGYSGTGRVTVGGPNRNVWAEGQVNGGWSGRPSVGGMVGGTLRF*
Ga0114336_100768343300008261Freshwater, PlanktonMQTLQFTNPNPRTSPAGFSGSFNANNQGYNGTGRVTIGNENRNLFIQGQVGGGWSGRPSVGGMVGGTIRF*
Ga0114336_101574053300008261Freshwater, PlanktonMQTIRIPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGNANRNAFVQGQVGGGWSGRPSGSVMAGGQIRF*
Ga0114336_126176023300008261Freshwater, PlanktonMQRQTIRFPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGNANRNAFVQGQVSGGWNSRPSASVMAGGQIRF*
Ga0104242_109046613300008962FreshwaterSMQTLQFTNPNPRTSPAGLSGSFNANNQGYSGTGRVTIGNENRNVFVQGQVSGGWSGGRPNVGGMVGGMIRF*
Ga0114918_1006462523300009149Deep SubsurfaceMQTIRFPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGNANRNAFVQGQVGGGWSGRPSGSVMAGGQIRF*
Ga0114981_1002495733300009160Freshwater LakeMQTIHIPSPNPHTSPAGFSGSFNANNQGYNGTGRVTFGNENRSVYVQGQVGGGWSGRPSVGGMVGGTIRF*
Ga0114966_1023555523300009161Freshwater LakeMQTISFPNPNPRTSPAGFSGSLNANNQGYSGSGRVTVGNENRNVFVQGQVGGGWSGRPSFGGMVGGQIRF*
Ga0114974_10000206533300009183Freshwater LakeMQTISIPNPNPRTSPSGVSGSFNANNEGYSGSGRVTVGNQNRNAFVQGQVDGGWSGRPSFGGMVGGQIRF*
Ga0114974_1020739733300009183Freshwater LakeMQTIHIPNPNPRTSPAGFSGSLNAENRGWSGSGRVTIGGPNRHVFVQGDINGGWSGRPSVGGMVGGTIRF*
Ga0103869_1017026913300009257River WaterVIRIANPAPRTSPAGLSGTINANNEGYSATARATVGNANRSAFVEGQVSGGWNGQPSLGGMVGGTFRF*
Ga0127391_102525213300009450Meromictic PondMSFEVISVSPSSKSTPISFSNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRL*
Ga0127391_110539423300009450Meromictic PondMQTISIPNPNPRTSPAGFSGSFNASNQDYSGSGRVTIGNENRNLYLQGQVGGGWSGRPSFGGMVGGQIRF*
Ga0129333_1000417563300010354Freshwater To Marine Saline GradientMSFEAMSVSPSSKRAQIRIPNPNPRTSPAGFSGSFNASNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSLGGMVGGQIRF*
Ga0129333_1003003213300010354Freshwater To Marine Saline GradientMQTISIPNPNPRTSPSGFSGSFNANNQGYSGAGRVTVGNENRNLFVQGQVGGGWSGRPSFGGMVGGQ
Ga0129333_1008825543300010354Freshwater To Marine Saline GradientMQTIRFPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGGPNRNVWAEGQVNGGWSGRPNVGGMVGGTIRF*
Ga0129333_1012363623300010354Freshwater To Marine Saline GradientMQTIHIPNPNPRTSPAGISGSFNANNQGYNGSGRVTVGGPNRSVFVEGQIGGGWSGRPSVGGMVGGTIRF*
Ga0129333_1022233023300010354Freshwater To Marine Saline GradientMQTQTISFPNPNPRTSPAGFSGSFSANNQGYSGSGRVTVGNENRNLFVQGQVGGGWNSRPSFGGMVGGQIRF*
Ga0129333_1036545313300010354Freshwater To Marine Saline GradientMQTIHIPNPNPRTSPAGFSGSFNANNQGYNGTGRVTFGNENRSVYVQGQVGGGWSGRPSVGGMVGGTIRF*
Ga0129333_1037292613300010354Freshwater To Marine Saline GradientMQTISIPNPNPRTSPAGFSGSFNANNNGYSGTGRVTVGNENRHVFVQGQVGGGWSGRPSFGGMVGGTIRF*
Ga0129333_1058087323300010354Freshwater To Marine Saline GradientMSFEVISVSPSSKNTQISFSNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSLGGMVGGQIRF*
Ga0129333_1058157713300010354Freshwater To Marine Saline GradientMQTIHIPNPNPRTSPAGFSGSFNANNQGYSGTGRLTFGNDNRNVFVQGQVGGQWSGGRPSYGGMVGGTIRF*
Ga0129336_1001895143300010370Freshwater To Marine Saline GradientMPSQTIRISNPNPRTSPSGISGSFNANNQGYSGTGRVTVGNPNRNLFVEGQVSGGWSTRPSFGGMVGGQIRF*
Ga0129336_1016153133300010370Freshwater To Marine Saline GradientMPSQTIRISNPNPRTSPSGVTGSFNANNQGYSGTGRVTVGNPNRNLFVEGQVSGGWSTRPSFGGMVGGQIRF*
Ga0129336_1053914113300010370Freshwater To Marine Saline GradientMSFEAMSVSPSSKRAQIRIPNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGR
Ga0133913_1052752133300010885Freshwater LakeMQTLQFTNPNPRTSPAGFSGSFNANNQGYSGTGRVTFGNENRSVYVQGQVDGGWSGGRPSVGGMVGGTIRF*
Ga0133913_1060277343300010885Freshwater LakeMQSLQFTNPNPRTSPAGFSGSISANNQGYNGTGRVTFGNENRNVFVQGQVGGGWSGRPSVGGMVGATIRF*
Ga0133913_1081350953300010885Freshwater LakeMQRQTLRFPNPNQRTSPAGVSGSFNANNQGFSGTGRVTVGNANRNAFVQGQVSGGWSGRPSSSVMAGGQIRF*
Ga0133913_1134997313300010885Freshwater LakeMQTLRFTNPNPRTSPAGFSGSFNAENSGWSGTGRVTVGGPNRSVWAEGQVSGGWSGTRPSVGGMVGGTIRF*
Ga0133913_1145813223300010885Freshwater LakeMQSLQFTNPNPRTSPAGFSGSFNANNQGYSGTGRVTIGNENRNLFVQGQVGGGWSGGRPSLGGMVGGTIRF*
Ga0119951_100222043300012000FreshwaterMQTLQFTNPNPRTSPAGLSGSFNANNQGYSGTGRVTIGNENRNVFVQGQVSGGWSGGRPNVGGMVGGMIRF*
Ga0119951_103553023300012000FreshwaterMQRQTIRFPQRTSPAGVSGSFNANNQGFSGTGRVTVGNENRNAFVQGQVSGGWNSRPSASVMAGGQIRF*
Ga0163212_119453913300013087FreshwaterNIFCVININCSLKPTQSPTLMQTIRIPSPNPRTSPAGFSGSFNANNNGYSGSGRVTVGGPNRSVWAQGQINGGWSGRPSVGGMVGGTIRF*
Ga0163212_122003023300013087FreshwaterMQTISIPNPNPRTSPAGFSGSFNANNNGYSGTGRVTVGNDNRNVWAQGQINGGWSGRPNFGGMVGATIRF*
(restricted) Ga0172373_1003599143300013131FreshwaterMQTIRIPNPNPRTSPAGFSGSFDANNNGYSGTGRVTVGGPNRSVWAEGQVGGSWSGRPSFGGMVGGTIRF*
(restricted) Ga0172362_1069447323300013133SedimentMSFEVMSVSPSSKSTQIRIPNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF*
(restricted) Ga0172376_1080087313300014720FreshwaterMQTIRIPNPNPRTSPAGFSGSFNADNNGYSGTGRVTVGGPNRSVWAEGQVGGSWSGRPSFGGMVGGTIRF*
Ga0169931_1007355913300017788FreshwaterMSFEVMSVSPSSKSTQIRIPNPNPRTSPAGFSGSFNANNGGWNGSGRITLGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0194113_1011782143300020074Freshwater LakeMPSQTIRISNPNPRTSPSGVTGSFNANNQGYSGTGRVTVGNPNRNLFVEGQVSGGWSTRPSFGGMVGGQIRF
Ga0194113_1033371023300020074Freshwater LakeMQTIRIPNPNPRTSPAGFSGSFNANNNGYSGSGRVTVGGPNRSVWAQGQINGGWSGRPSVGGMVGGTIRF
Ga0194111_1040496323300020083Freshwater LakeMSFEVVSVSPSSKSTPIRFSNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0194111_1094611613300020083Freshwater LakeMSFEVMSVSPSSKNTQISFPNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGSWSGRPSFGGMVGGQIRF
Ga0194110_1055809223300020084Freshwater LakeLPNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0194110_1060204023300020084Freshwater LakeRIPNPNPRTSPAGFSGSFNANNNGYSGSGRVTVGGPNRSVWAQGQINGGWSGRPSVGGMVGGTIRF
Ga0194112_1020365533300020109Freshwater LakeMSFEVMSVSPSSKRTPIRFSNPNPRTSPAGFSGSFNANNGGWNGSGRITLGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0194112_1051657213300020109Freshwater LakeMQTIRFTNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGGPNRNVWAEGQVNGGWSGRPNVGGMVGGTIRF
Ga0194112_1069870023300020109Freshwater LakeMQTIRIPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGNDNRNIWAQGQINGGWSGRPSVGGMVGGTIRF
Ga0194134_1010517323300020179Freshwater LakeMQTIRIPNPNPRTSPSGFSGSFNANNQGYSGAGRVTVGNQNRNLFVEGQVGGGWSGRPSFGGMVGGQIRF
Ga0194134_1010549633300020179Freshwater LakeMQTIRIPNPNPRQSPAGFSGSFNANNQGYNGSGRVTVGGPNRSVFVEGQIGGGWSGRPSVGGMVGGTIRF
Ga0194134_1018086413300020179Freshwater LakeMQTIRIPNPNPRTSPAGFSGSFDANNNGYSGTGRVTFGNENRSVYVQGQVGGGWSGRPSFGGMVGGTIRF
Ga0194118_1018977813300020190Freshwater LakeMSFEAMSVSPSSKRAQIRIPNPNPRTSPAGFSGSINANNGGWSGSGRVTVGNENRNVFVQGQASGGWSGRP
Ga0194118_1019886233300020190Freshwater LakeMSFEVVSVSPSSKSTPISFSNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0194124_1009864233300020196Freshwater LakeMSVSPSSKRAQIRIPNPNPRTSPAGFSGSINANNGGWSGSGRVTVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0194124_1019058723300020196Freshwater LakeMQTLRFTNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGGPNRNVWAEGQVNGGWSGRPNVGGMVGGTIRF
Ga0194124_1019898533300020196Freshwater LakeMQTISIPNPNPRTSPAGFSGSFNANNNGYSGTGRVTVGGPNRSVWAEGQIGGGWSGRPSF
Ga0194116_1006669733300020204Freshwater LakeMQTIHIPNPNPHTSPAGFSGSFNANNQGYSGTGRLTFGNDNRNVFVQGQVGGQWSGGRPSYGGMVGGTIRF
Ga0194116_1010851213300020204Freshwater LakeSSKSTPIRFSNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0194116_1037109823300020204Freshwater LakeMQRFTNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGGPNRNVWAEGQVNGGWSGRPNVGGMVGGTIRF
Ga0211731_1047744923300020205FreshwaterMQTLHFPNPNPRTSPAGFSGSLNANNQGYSGSGRVTVGNENRNLFVEGQVGGGWSGRPSFGGMVGGQLRF
Ga0211731_1122239563300020205FreshwaterMQTIRIPNPNPRTSPAGFSGSVNANNNGYSGSGRVTIGGPNRNAFVQGDINGGWSGRPSVGGMVGGTIRF
Ga0194132_1005882923300020214Freshwater LakeMQTISIPNPNPRTSPAGFSGSFNANNNGYSGTGRMTFGNENRSVYVQGQVGGGWSGRPSFGGMVGGTIRF
Ga0194119_1022931023300020220Freshwater LakeMQTIRIPNPNPRTSPAGFSGSFGANNQGYGGTGRITVGGPNRNVFVEGQVNGGWSARPSFGGMVGGTIRF
Ga0194127_1005277313300020221Freshwater LakeCVININCSLKPTQSPTLMQTIRIPNPNPRTSPAGFSGSFNANNNGYSGSGRVTVGGPNRSVWAQGQINGGWSGRPSVGGMVGGTIRF
Ga0194125_1047947813300020222Freshwater LakeMSFEVISVSPSSKSTPISFSNPNPRTSPAGFSGSFNANNNGWNGTGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0208222_100135653300020566FreshwaterMQTISIPNPNPRTSPSGFSGSFNANNQGYSGAGRVTVGNENRNLFVQGQVGGGWSGRPSFGGMVGGQIRF
Ga0194129_1010275023300020578Freshwater LakeMQTQTISIPNPNPRTSPAGFSGSFNANNQGYSGSGRVTIGNENRNLFVQGQVGGGWNSRPSFGGMVGGQIRF
Ga0194133_1000382763300021091Freshwater LakeMQTIRIPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGGPNRNIWAEGQINGGWSGRPNVGGMVGGTIRF
Ga0194133_1000519783300021091Freshwater LakeLNPTPTLSISLSMQTIRIPNPNPRQSPAGFSGSFNANNQGYNGSGRVTVGGPNRSVFVEGQIGGGWSGRPSVGGMVGGTIRF
Ga0194133_1039294813300021091Freshwater LakeVMSVSPSSKRTPIRFSNPNPRTSPAGFSGSFNANNGGWNGSGRITLGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0194123_1042919023300021093Freshwater LakeMSFEAMSVSPSSKRAQIRIPNPNPRTSPAGFSGSINANNGGWSGSGRVTVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0194130_1006950813300021376Freshwater LakeMQTIRIPNPNPRTSPAGFSGSFNANNNGYSGSGRVTVGGPNRSVWAQGQINGGWSGRPSVGGMV
Ga0194117_1001576183300021424Freshwater LakeMSVSPSSKRTPIRFSNPNPRTSPAGFSGSFNANNGGWNGSGRITLGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0194117_1012430123300021424Freshwater LakeMQTPPISIPNPNPRTSPAGFSGSFNANNQGYSGSGRVTIGNENRNLFVQGQVGGGWNSRPSFGGMVGGQIRF
Ga0194117_1029840013300021424Freshwater LakeMQTHRVSKPMPKQHTSSPARFSGSINANNQGYNGTGRVTVGGPNRNVWAQGQVSGGWSGRPTVGGMVGGT
Ga0222714_1000185493300021961Estuarine WaterMQTISIPNPNPRTSPSGFSGSFNANNQGYSGSGRVTVGNENRNLFVQGQVGGGWSGRPSFGGMVGGQIRF
Ga0222714_1000295943300021961Estuarine WaterMQTLQFTNPNPRTSPAGVSGSFNANNQGYNGTGRVTVGGPNRNVWAEGQVSGGWSGRPSVGGMVGGTLRF
Ga0222714_1009054443300021961Estuarine WaterMSFEVISVSPSSKSTPIHFSNPNPRTSPAGFSGSFNANNGGWNGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0224500_1025909913300022213SedimentMQTISIPNPNPRTSPAGFSGSFNANNQGYSGSGRVTIGNENRNLFLQGQVGGGWNSRPSFGGMVGGQIRF
Ga0214917_10009341123300022752FreshwaterMSFEVNSVSSASRNTSIRFPNPNPRTSPAGFSGSFNANNGGWSGTGRITVGNENRNVFVQGQATGGWSGRPSLGGMVGGQIRF
Ga0214917_1012093043300022752FreshwaterMSFEVISVSPSSKSTPISFPNPNPRTSPAGFSGSFNANNEGWSGTSRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0214917_1014011423300022752FreshwaterMQTIRIPNPNPRTSPAGFSGSFNANNNGYSGSGRVTIGGPNRNAFVQGDINGGWSGRPSVGGMVGGTIRF
Ga0214917_1020077113300022752FreshwaterMQTLQFTNPNPRTSPAGLSGSFNANNQGYSGTGRVTIGNENRNVFVQGQVSGGWSGGRPNVGGMVGGMIRF
Ga0214921_1000500383300023174FreshwaterMQTISFPNPNPRTSPAGFSGSFNANNHGYSGSGRVTVGNENRNLFIQGQVGGGWSGRPSFGGMVGGQIRF
Ga0214921_10013736123300023174FreshwaterMQTIRIPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGNDNRNVWAQGQINGGWSGRPSVGGMVGGTLRF
Ga0214921_1002928043300023174FreshwaterMQTLQFTNPNPRTSPAGFSGSFNANNQGYSGTGRVTIGNENRHVFVQGQVGGSWSGGRPSVGGMVGGTIRF
Ga0214919_10000363453300023184FreshwaterMSFEVVSVSPSSKNTSISFPNPNPRTSPAGFSGSINANNGGWNGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0255209_1000131263300024280FreshwaterMQTIRIPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGGPNRNVWAEGQVSGGWSGRPNVGGMVGGTIRF
Ga0255209_102283423300024280FreshwaterMSFEAMSVSPSSKRAQIRIPNPNPRTSPAGFSGSFNASNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSLGGMVGGQIRF
Ga0255217_100303543300024282FreshwaterMQTISIPNPNPRTSPAGFSGSFNANNQGYSGSGRVTIGNENRNLYLQGQVGGGWSGRPSFGGMVGGQIRF
Ga0255217_100331033300024282FreshwaterMQTISIPNPNPRTSPAGFSGSFSASNQGYSGSGRVTIGNENRNLFVQGQVGGGWNSRPSFGGMVGGQIRF
Ga0255217_106096523300024282FreshwaterMQTLQFTNPNPRTSPAGFSGSFNANNQGYNGTGRITFGNDNRHVFVQGQVGGSWSGGRPSVGGMVGGTIRF
Ga0255178_100922313300024298FreshwaterFFNIVMSFEVISVSPSSKNTQISFPNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0255178_107806013300024298FreshwaterMSFEVISVSPSSKNTQISFPNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0255221_102597513300024307FreshwaterMQTLQFTNPNPRTSPAGFSGSFNANNNGYSGSGRVTIGGPNRNIWAEGQIGGGWSGRPSVGGMV
Ga0255211_1000692103300024311FreshwaterMQTISIPNPNPRTSPAGFSGSFNANNQGYTGTGRMTFGNDNRSVYIQGQVGGGWSGRPSVGGMVGGTIRF
Ga0255211_104217333300024311FreshwaterMSFEVVSVSPSSKNTQISFPNPNPRTSPAGFSGSFNANNGGWNGSGRITLGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0255167_102147033300024350FreshwaterMSFEVISVSPSSKSTPISFSNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMIGGQIRF
Ga0255169_103609523300024356FreshwaterMQTIHIPNPNPRTSPAGFSGSFNANNQGYSGTGRLTFGNDNRNVFVQGQVGGQWSGGRPSYGGMVGGTIRF
Ga0255168_101932843300024506FreshwaterSLRIIIFFNIVMSFEVISVSPSSKNTQISFPNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMIGGQIRF
Ga0255176_104668223300024507FreshwaterMSFEVISVSPSSKNTQISFPNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMIGGQIRF
Ga0208783_1007719823300025872AqueousMSFEVVSVSPSSKNTSISFPNPNPRTSPAGFSGSINANNGGWSGTGRITVGNENRNIFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0255170_100853253300026459FreshwaterPSSKSTPISFSNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0255170_106083733300026459FreshwaterMSFEVISVSPSSKNTQISFPNPNPRTSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRP
Ga0255090_105189323300027123FreshwaterPEMQSLQFTNPNPRTSPAGFSGSFNANNQGYSGTGRVTFGNENRSVYVQGQVGAGWSGGRPSVGGMVGGTIRF
Ga0255098_105807913300027126FreshwaterTSPAGFSGSFNANNQGYSGTGRVTFGNENRSVYVQGQVGAGWSGGRPSVGGMVGGTIRF
Ga0255099_106234923300027128FreshwaterPAGFSGSFNANNQGYSGTGRVTFGNENRSVYVQGQVGAGWSGGRPSVGGMVGGTIRF
Ga0255092_105924513300027137FreshwaterEMQSLQFTNPNPRTSPAGFSGSFNANNQGYSGTGRVTFGNENRSVYVQGQVGAGWSGGRPSVGGMVGGTIRF
Ga0255093_109806023300027492FreshwaterMQSLQFTNPNPRTSPAGFSGSFNANNQGYSGTGRVTFGNENRSVYVQGQVGAGWSGGRPSVGGMVGGTIRF
Ga0255094_107075213300027494FreshwaterNPNPRTSPAGFSGSFNANNQGYSGTGRVTFGNENRSVYVQGQVGAGWSGGRPSVGGMVGGTIRF
Ga0209356_102616313300027644Freshwater LakeMQTIRIHNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGNANRNAFVQGQVSGGWNSRPSASVMAGGQIRF
Ga0209357_117484923300027656Freshwater LakeIRFPQRTSPAGVSGSLNANNQGFSGTGRVTVGNANRNAFVQGQISGGWNSRPSASVMAGGQIRF
Ga0209296_1000017193300027759Freshwater LakeMQTISIPNPNPRTSPSGVSGSFNANNEGYSGSGRVTVGNQNRNAFVQGQVDGGWSGRPSFGGMVGGQIRF
Ga0209296_121170913300027759Freshwater LakeMQTIHIPNPNPRTSPAGFSGSLNAENRGWSGSGRVTIGGPNRHVFVQGDINGGWSGRPSVGGMVGGTIRF
Ga0209770_10000026493300027769Freshwater LakeLTPTQSHILMQTLQFTNPNPRTSPAGFSGSFNANNQGYSGAGRVTIGNENRNLFVQGQVGGGWSGRPSVGGMVGGTIRF
Ga0209770_10000097443300027769Freshwater LakeMQTIHIPNPNPRTSPAGFSGSFNANNQGYGGTGRVTVGGPNRSVFVEGQVNGGWSGRPSFGGMVGGTIRF
Ga0209770_1000086973300027769Freshwater LakeMQTISIPNPNPRTSPAGFSGSFNASNQGYSGSGRVTIGNENRNLYLQGQVGGGWSGRPSFGGMVGGQIRF
Ga0209770_1002263643300027769Freshwater LakeMSFEVVSVSPSSKNTSISFPNPNPRTSPAGFSGSINANNGGWSGTGRITVGNENRNIFVQGQASGGWSGSPSFGGMVGGQIRF
Ga0209358_1010212623300027804Freshwater LakeMQTIHIPNPNPRTSPAGFSGSFNANNQGYNGAGRVTFGNENRSVYVQGQVGGGWSGRPSVGGMVGGTIRF
Ga0209229_1023423413300027805Freshwater And SedimentMQTISIQNPNPRTSPAGFSGSANINNQGYSGSGRITVGNPNRNLFVEGQVGGGWSGRPSFGGMVGGQIRF
Ga0209550_1003892353300027892Freshwater LakeMQTIRIPNPNPRTSPAGVSGSFNANNQGYNGTGRVTIGGPNRNVWAEGQVNGGWSGRPSVGGMVGGTLRF
Ga0209299_126943923300027974Freshwater LakeFAPPMQTIHIPSPNPHTSPAGFSGSFNANNQGYNGTGRVTFGNENRSVYVQGQVGGGWSGRPSVGGMVGGTIRF
Ga0247722_1000099143300028027Deep Subsurface SedimentMQTIHIPNPNPHTSPSGFSGSINANNQGYTGTGRVTFGNENRNVFVQGQVGGGWSGRPSVGGMVGATIRF
Ga0247722_1001245823300028027Deep Subsurface SedimentMQTISIQNPNPRTSPAGFSGSANINNQGYGGSGRITVGTPNRSIFVEGQVGGGWSGRPSFGGMVGGQIRF
Ga0247722_1002421743300028027Deep Subsurface SedimentMQSLQFTNPTPRTSPAGFSGSISANNQGYSGTGRVTFGNENRNVFVQGQVGGGWSGRPSVGGMVGATIRF
(restricted) Ga0247841_1054635413300029286FreshwaterMSFEVISVSPSSKSTPISFSNPNPRTSPAGFSGSFDANNGGWNGSGRITAGNENRNIFIQGQASGGWSGRPSFGGMVGGQIRF
Ga0307380_1063718723300031539SoilMQTIHFPNPNPRTSPAGFSGSANANNQGYSGSGRVTVGNENRNLFVQGQVGGGWSGRPSFGGMVGGQIRF
Ga0307379_1048118723300031565SoilMQTIHFPNPTPRTSPAGFSGSANANNQGYNGSGRVTVGNENRNLFVQGQVSGGWSGRPSFGGMVGGQIRF
Ga0307378_1098941623300031566SoilMQTIRIPNPNPRTSPARFSGSANANNQGFSGTGRVTVGNANRNAFVQGQVSGGWNSRPSASVMAGGQIRF
Ga0315291_1000260693300031707SedimentMQTISFPNPNPRTSPSGFSGSFNANNQGYGGSGRITVGNENRNVFVQGQVGGGWSGRPSFGGMVGGQIRF
Ga0315291_1144363523300031707SedimentMQTIRFPNPNPRTSPAGVSGSFNANNQGFSGSGRVTVGNANRNAFVQGQVGGGWSGRPSG
Ga0315293_1006145423300031746SedimentMTYPPLNPTPPVQSNPMQTLHFPNPNPRTSPAGFSGSLNANNQGYSGSGRVTVGNENRNLFVEGQVGGGWSGRPSFGGMVGGQLRF
Ga0315293_1010355723300031746SedimentMQTIRFPNPNPRTSPAGVSGSFNANNQGFSGTGRATVGNANRNAFVQGQVSGGWSGRPSASVMAGGQIRF
Ga0315293_1023842313300031746SedimentMQTIRFPNPNPRTSPAGVSGSFNANNQGFSGSGRVTVGNANRNAFVQGQVGGGWSGRPSGSVMAGGQIRF
Ga0315293_1045509123300031746SedimentMQTIRFPNPNPRTSPSGVSGSFNANNQGFSGSGRVTVGNENRNAFVQGQVGGGWNSRPSFGGMVGGQIRF
Ga0315293_1126206523300031746SedimentMQTIRLPHPRISPAGFSGTFNANNQGYSGTGRVTVGNENRNLFLQGQVGGGWSGRPSFGGMVGGQLRF
Ga0315288_1044354633300031772SedimentMSFEVISVSPSSKSTPISFSNPNPRTSPAGFSGSFNANNGGWSGTGRITAGNENRNIFVQGQASGGWSGRPSFGGMLGGQIRF
Ga0315288_1074540713300031772SedimentMSFEVISVSPSSKSTQIRFPNPNPRTSPAGFSGSFNANNGGWNGTGRITVGNENRNIFVQGQATGGWSGRPSLGGMVGGQIRF
Ga0315899_1133233813300031784FreshwaterMQTLQFTNPNPRTSPAGFSGSFNANNQGYSGAGRVTIGNENRNLFVQGQVGGGWSGRPSVGGMVGGTIRF
Ga0315294_1001921013300031952SedimentRTSPSGFSGSFNANNQGYGGSGRITVGNENRNVFVQGQVGGGWSGRPSFGGMVGGQIRF
Ga0315294_1027116023300031952SedimentMQTISIPNPNPRTSPAGFSGSFNASNQGYSGSGRVTVGNENRNLYLQGQVGGGWSGRPSFGGMVGGQIRF
Ga0315289_1152798223300032046SedimentMQTIRFPNPNPRTSPAGVSGSFNANNQGFSGSGRVTVGNANRNAFVQGQVGGGWSGRPSGSVMAGGQIR
Ga0315906_1034683323300032050FreshwaterMQTIRIPNLNPRTSPARFSGSFNAENRGWSGSGRVTVGGPNRNVFVQGDINGGWSGRPSVGGMVGGTIRF
Ga0315284_1212509013300032053SedimentSPSSKSTQIRFPNPNPRTSPAGFSGSFNANNGGWNGTGRITVGNENRNIFVQGQATGGWSGRPSLGGMVGGQIRF
Ga0315276_1038321423300032177SedimentMQTIHFPNPNPRTSPAGFSGSLNANNQGYSGSGRVTIGNENRNLYLQGQVGGGWSGRPSFGGMVGGQIRF
Ga0334978_0003412_1462_16803300033979FreshwaterMQRQTLRFPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGNANRNAFVQGQVSGGWNGRPSASVMAGGQIRF
Ga0335003_0234054_127_3423300033995FreshwaterMQSLQFTNPNPRTSPAGFSGSFNANNQGYSGAGRVTFGNENRNVFVQGQIGGGWSGGRPSVGGMVGGTIRF
Ga0335002_0069471_973_12243300034020FreshwaterMSFEVISVSPSSKNTQISFPNPNPITSPAGFSGSFNANNGGWSGSGRITVGNENRNVFVQGQASGGWSGRPSFGGMVGGQIRF
Ga0334990_0182028_359_5623300034068FreshwaterMQTIRFPPRTSPAGVSGSFNANNQGFSGSGRVTVGNENRNAFVQGQVGGGWSGRPSASVMVGGQIRF
Ga0335012_0293010_3_1943300034093FreshwaterMQTIRFPPRTSPAGVSGSFNANNQGFSGSGRVTVGNENRNAFVQGQVGGGWSGRPSASVMVGGQ
Ga0335029_0104434_119_3313300034102FreshwaterMQTIHIPNPNPRTSPAGVSGSFNANNQGYNGSGRVTVGGPNRSVFVEGQIGGGWSGRPSVGGMVGGTIRF
Ga0335031_0050959_1_2043300034104FreshwaterMQTIRIPNPNPRTSPAGVSGSFNANNQGFSGTGRVTVGNANRNAFVQGQVGGGWSGRPSGSVMAGGQI
Ga0335068_0002825_9496_97113300034116FreshwaterMQSLQFTNPNPRTSPAGFSGSFNANNQGYSGAGRVTIGNENRNVFVQGQIGGGWSGGRPSVGGMVGGTIRF
Ga0335016_0377173_171_3983300034166FreshwaterMPTIRVPNPAPRVSPAGFSGSASANNEGYSVSARQTFGGVNRNVFVEGQVSGAWGQQPSFGGMVGMSHGPALLIF
Ga0335007_0357869_393_6083300034283FreshwaterMQTLQFTNPNPRTSPAGFSGSFNANNQGYTGTGRVTLGNENRHLFVQGQVGGGWTGGRPSVGGMVGGTIRF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.