NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F031174

Metagenome / Metatranscriptome Family F031174

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F031174
Family Type Metagenome / Metatranscriptome
Number of Sequences 183
Average Sequence Length 83 residues
Representative Sequence MLQMVPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEESGFAVLAQAIRRCPYKLVVRGLGDQDAISYK
Number of Associated Samples 131
Number of Associated Scaffolds 183

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 57.38 %
% of genes near scaffold ends (potentially truncated) 26.78 %
% of genes from short scaffolds (< 2000 bps) 79.23 %
Associated GOLD sequencing projects 113
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (91.257 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(28.962 % of family members)
Environment Ontology (ENVO) Unclassified
(39.891 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.273 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.52%    β-sheet: 29.73%    Coil/Unstructured: 47.75%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
c.13.2.1: Anti-sigma factor antagonist SpoIIaad1vc1a_1vc10.76947
c.13.2.0: automated matchesd6m37b_6m370.74059
c.14.1.0: automated matchesd3fdua13fdu0.73146
c.14.1.4: Biotin dependent carboxylase carboxyltransferase domaind1on3a11on30.72318
c.14.1.1: Clp protease, ClpP subunitd6w9ta_6w9t0.72143


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 183 Family Scaffolds
PF02900LigB 20.77
PF07687M20_dimer 14.21
PF01546Peptidase_M20 7.65
PF00892EamA 7.65
PF14332DUF4388 1.64
PF13466STAS_2 1.64
PF04228Zn_peptidase 1.64
PF00378ECH_1 1.09
PF00672HAMP 0.55
PF0563523S_rRNA_IVP 0.55
PF13193AMP-binding_C 0.55
PF07478Dala_Dala_lig_C 0.55
PF00480ROK 0.55
PF05598DUF772 0.55
PF027395_3_exonuc_N 0.55
PF01554MatE 0.55
PF07969Amidohydro_3 0.55

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 183 Family Scaffolds
COG2321Predicted metalloproteaseGeneral function prediction only [R] 1.64
COG1940Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domainTranscription [K] 1.09
COG02585'-3' exonuclease Xni/ExoIX (flap endonuclease)Replication, recombination and repair [L] 0.55


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.26 %
UnclassifiedrootN/A8.74 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001545|JGI12630J15595_10036021All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300002558|JGI25385J37094_10000787All Organisms → cellular organisms → Bacteria9235Open in IMG/M
3300002568|C688J35102_117764753All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria504Open in IMG/M
3300003324|soilH2_10242376All Organisms → cellular organisms → Bacteria → Proteobacteria2043Open in IMG/M
3300004081|Ga0063454_100000758All Organisms → cellular organisms → Bacteria → Proteobacteria4926Open in IMG/M
3300005167|Ga0066672_10025639All Organisms → cellular organisms → Bacteria3153Open in IMG/M
3300005167|Ga0066672_11008875All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300005171|Ga0066677_10236192All Organisms → cellular organisms → Bacteria → Proteobacteria1034Open in IMG/M
3300005171|Ga0066677_10289325All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300005174|Ga0066680_10338676All Organisms → cellular organisms → Bacteria → Proteobacteria959Open in IMG/M
3300005174|Ga0066680_10439086Not Available825Open in IMG/M
3300005175|Ga0066673_10584070All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300005176|Ga0066679_10176755All Organisms → cellular organisms → Bacteria → Proteobacteria1351Open in IMG/M
3300005177|Ga0066690_10405400All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300005178|Ga0066688_10047794All Organisms → cellular organisms → Bacteria2461Open in IMG/M
3300005178|Ga0066688_10743280All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300005179|Ga0066684_10309229All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans1051Open in IMG/M
3300005181|Ga0066678_10169796All Organisms → cellular organisms → Bacteria1376Open in IMG/M
3300005184|Ga0066671_10154178All Organisms → cellular organisms → Bacteria1342Open in IMG/M
3300005184|Ga0066671_10253231All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300005186|Ga0066676_10164818Not Available1403Open in IMG/M
3300005187|Ga0066675_10021734All Organisms → cellular organisms → Bacteria3630Open in IMG/M
3300005330|Ga0070690_100399774All Organisms → cellular organisms → Bacteria → Proteobacteria1009Open in IMG/M
3300005365|Ga0070688_100858605All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans713Open in IMG/M
3300005440|Ga0070705_100320146Not Available1119Open in IMG/M
3300005444|Ga0070694_101717679All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans534Open in IMG/M
3300005445|Ga0070708_100633421All Organisms → cellular organisms → Bacteria → Proteobacteria1008Open in IMG/M
3300005446|Ga0066686_10212168Not Available1300Open in IMG/M
3300005446|Ga0066686_10628078All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300005451|Ga0066681_10878228All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005454|Ga0066687_10932451All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300005458|Ga0070681_10429812All Organisms → cellular organisms → Bacteria1232Open in IMG/M
3300005518|Ga0070699_100170221Not Available1930Open in IMG/M
3300005536|Ga0070697_101802097All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300005536|Ga0070697_101879375All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300005552|Ga0066701_10139409All Organisms → cellular organisms → Bacteria → Proteobacteria1452Open in IMG/M
3300005553|Ga0066695_10427397All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300005554|Ga0066661_10765379All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300005557|Ga0066704_10101338All Organisms → cellular organisms → Bacteria1890Open in IMG/M
3300005559|Ga0066700_10996934All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300005561|Ga0066699_10213762All Organisms → cellular organisms → Bacteria → Proteobacteria1348Open in IMG/M
3300005561|Ga0066699_10600515All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300005566|Ga0066693_10047269All Organisms → cellular organisms → Bacteria1426Open in IMG/M
3300005575|Ga0066702_10141103All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1418Open in IMG/M
3300005575|Ga0066702_10545508All Organisms → cellular organisms → Bacteria → Proteobacteria701Open in IMG/M
3300005576|Ga0066708_10091142All Organisms → cellular organisms → Bacteria1795Open in IMG/M
3300005598|Ga0066706_10004959All Organisms → cellular organisms → Bacteria6491Open in IMG/M
3300005598|Ga0066706_10487631All Organisms → cellular organisms → Bacteria → Proteobacteria982Open in IMG/M
3300005893|Ga0075278_1044689All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300006046|Ga0066652_100809135Not Available896Open in IMG/M
3300006046|Ga0066652_102061044All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300006175|Ga0070712_101645262All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300006755|Ga0079222_10408346All Organisms → cellular organisms → Bacteria → Proteobacteria949Open in IMG/M
3300006796|Ga0066665_10027008All Organisms → cellular organisms → Bacteria3707Open in IMG/M
3300006797|Ga0066659_10179008All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1533Open in IMG/M
3300006804|Ga0079221_11476116All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300006854|Ga0075425_100527283All Organisms → cellular organisms → Bacteria → Proteobacteria1360Open in IMG/M
3300006904|Ga0075424_101103461All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria845Open in IMG/M
3300007255|Ga0099791_10022485All Organisms → cellular organisms → Bacteria2720Open in IMG/M
3300007255|Ga0099791_10108611All Organisms → cellular organisms → Bacteria1281Open in IMG/M
3300007258|Ga0099793_10002008All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales6686Open in IMG/M
3300007258|Ga0099793_10036429All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2118Open in IMG/M
3300007258|Ga0099793_10079245All Organisms → cellular organisms → Bacteria1496Open in IMG/M
3300007258|Ga0099793_10681288All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300007265|Ga0099794_10029672Not Available2549Open in IMG/M
3300009012|Ga0066710_100910219All Organisms → cellular organisms → Bacteria → Proteobacteria1354Open in IMG/M
3300009012|Ga0066710_102948157All Organisms → cellular organisms → Bacteria → Proteobacteria665Open in IMG/M
3300009012|Ga0066710_104021018All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300009143|Ga0099792_10556667All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300009792|Ga0126374_10524817All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300010159|Ga0099796_10193065All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300010335|Ga0134063_10441246All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300010336|Ga0134071_10670456All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300010397|Ga0134124_10276212All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1556Open in IMG/M
3300010403|Ga0134123_13132848All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300010880|Ga0126350_10471006All Organisms → cellular organisms → Bacteria2200Open in IMG/M
3300012200|Ga0137382_10982112All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300012202|Ga0137363_10148635Not Available1838Open in IMG/M
3300012202|Ga0137363_10387572All Organisms → cellular organisms → Bacteria1162Open in IMG/M
3300012202|Ga0137363_10493775Not Available1028Open in IMG/M
3300012203|Ga0137399_10010980All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales5455Open in IMG/M
3300012203|Ga0137399_10100398All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2237Open in IMG/M
3300012203|Ga0137399_10526046All Organisms → cellular organisms → Bacteria993Open in IMG/M
3300012205|Ga0137362_10279674All Organisms → cellular organisms → Bacteria → Proteobacteria1443Open in IMG/M
3300012205|Ga0137362_10448565All Organisms → cellular organisms → Bacteria1117Open in IMG/M
3300012205|Ga0137362_10463300All Organisms → cellular organisms → Bacteria1097Open in IMG/M
3300012205|Ga0137362_11789934All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300012208|Ga0137376_10053619All Organisms → cellular organisms → Bacteria3308Open in IMG/M
3300012212|Ga0150985_100572938All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300012212|Ga0150985_100803446All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300012212|Ga0150985_111247792All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300012212|Ga0150985_120213055All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300012212|Ga0150985_121603489All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300012361|Ga0137360_10146514All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas → Pseudoxanthomonas daejeonensis1866Open in IMG/M
3300012362|Ga0137361_10008802All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales7061Open in IMG/M
3300012406|Ga0134053_1251072All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300012469|Ga0150984_106394403All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300012469|Ga0150984_108153599Not Available790Open in IMG/M
3300012469|Ga0150984_111801225All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300012469|Ga0150984_114050990Not Available849Open in IMG/M
3300012582|Ga0137358_10066891All Organisms → cellular organisms → Bacteria → Proteobacteria2410Open in IMG/M
3300012685|Ga0137397_10016761All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales5122Open in IMG/M
3300012685|Ga0137397_10047231All Organisms → cellular organisms → Bacteria → Proteobacteria3085Open in IMG/M
3300012685|Ga0137397_10109814All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2027Open in IMG/M
3300012685|Ga0137397_10760811All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300012685|Ga0137397_11060668All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300012918|Ga0137396_10509777All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium891Open in IMG/M
3300012922|Ga0137394_11176645All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300012923|Ga0137359_10130129All Organisms → cellular organisms → Bacteria → Proteobacteria2237Open in IMG/M
3300012923|Ga0137359_10203464All Organisms → cellular organisms → Bacteria1768Open in IMG/M
3300012925|Ga0137419_10173781Not Available1575Open in IMG/M
3300012925|Ga0137419_10696667All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300012925|Ga0137419_10915352All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300012927|Ga0137416_10995111All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300012929|Ga0137404_10698572All Organisms → cellular organisms → Bacteria → Proteobacteria917Open in IMG/M
3300012944|Ga0137410_10871090All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300012944|Ga0137410_11313666All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300012977|Ga0134087_10538698All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300014154|Ga0134075_10358031All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300015052|Ga0137411_1252513Not Available827Open in IMG/M
3300015241|Ga0137418_10660655All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales809Open in IMG/M
3300015357|Ga0134072_10282475All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300017974|Ga0187777_11499637All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300018027|Ga0184605_10015620All Organisms → cellular organisms → Bacteria2977Open in IMG/M
3300018032|Ga0187788_10556334All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300018433|Ga0066667_10144410All Organisms → cellular organisms → Bacteria → Proteobacteria1668Open in IMG/M
3300018433|Ga0066667_12169517All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300018468|Ga0066662_10282925All Organisms → cellular organisms → Bacteria → Proteobacteria1380Open in IMG/M
3300018482|Ga0066669_10001848All Organisms → cellular organisms → Bacteria8366Open in IMG/M
3300018482|Ga0066669_10018166All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales3849Open in IMG/M
3300018482|Ga0066669_12386646All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300019789|Ga0137408_1021460All Organisms → cellular organisms → Bacteria2687Open in IMG/M
3300025910|Ga0207684_10241985All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1557Open in IMG/M
3300025910|Ga0207684_10479942All Organisms → cellular organisms → Bacteria → Proteobacteria1066Open in IMG/M
3300025917|Ga0207660_11090947All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300025939|Ga0207665_11318133All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300026300|Ga0209027_1132067Not Available862Open in IMG/M
3300026309|Ga0209055_1202164All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300026312|Ga0209153_1205699All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300026312|Ga0209153_1238213All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300026315|Ga0209686_1003575All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria7093Open in IMG/M
3300026318|Ga0209471_1242954All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300026322|Ga0209687_1035250All Organisms → cellular organisms → Bacteria1627Open in IMG/M
3300026322|Ga0209687_1243643All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300026330|Ga0209473_1009891All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales4753Open in IMG/M
3300026475|Ga0257147_1074015All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300026524|Ga0209690_1017439All Organisms → cellular organisms → Bacteria → Proteobacteria3688Open in IMG/M
3300026527|Ga0209059_1139529All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300026528|Ga0209378_1225218All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300026529|Ga0209806_1331218All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300026530|Ga0209807_1085456Not Available1389Open in IMG/M
3300026542|Ga0209805_1178721All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300026547|Ga0209156_10093356All Organisms → cellular organisms → Bacteria1507Open in IMG/M
3300026550|Ga0209474_10023850All Organisms → cellular organisms → Bacteria → Proteobacteria4682Open in IMG/M
3300026550|Ga0209474_10121520All Organisms → cellular organisms → Bacteria1732Open in IMG/M
3300026550|Ga0209474_10301917All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300026551|Ga0209648_10588949All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300026557|Ga0179587_10066201All Organisms → cellular organisms → Bacteria2118Open in IMG/M
3300027521|Ga0209524_1059028All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300027587|Ga0209220_1200822All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300027643|Ga0209076_1216374All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300027663|Ga0208990_1001863All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. Fw109-56390Open in IMG/M
3300027671|Ga0209588_1018068All Organisms → cellular organisms → Bacteria2193Open in IMG/M
3300027671|Ga0209588_1024235Not Available1915Open in IMG/M
3300027671|Ga0209588_1127409All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300027738|Ga0208989_10267734All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300027748|Ga0209689_1272344All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300027873|Ga0209814_10512862All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300027903|Ga0209488_10140681All Organisms → cellular organisms → Bacteria → Proteobacteria1821Open in IMG/M
3300028536|Ga0137415_10012444All Organisms → cellular organisms → Bacteria → Proteobacteria8431Open in IMG/M
3300031720|Ga0307469_10055731All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2518Open in IMG/M
3300031720|Ga0307469_10398508All Organisms → cellular organisms → Bacteria → Proteobacteria1174Open in IMG/M
3300031740|Ga0307468_102014446All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300031820|Ga0307473_10294651All Organisms → cellular organisms → Bacteria → Proteobacteria1018Open in IMG/M
3300031962|Ga0307479_10017651All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae6723Open in IMG/M
3300032074|Ga0308173_10888174All Organisms → cellular organisms → Bacteria → Proteobacteria824Open in IMG/M
3300032180|Ga0307471_100741246All Organisms → cellular organisms → Bacteria → Proteobacteria1148Open in IMG/M
3300032180|Ga0307471_100950476All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1027Open in IMG/M
3300032180|Ga0307471_102010082All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300032770|Ga0335085_10029132All Organisms → cellular organisms → Bacteria → Proteobacteria7719Open in IMG/M
3300033412|Ga0310810_10364769All Organisms → cellular organisms → Bacteria → Proteobacteria1511Open in IMG/M
3300033433|Ga0326726_10035317All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales4358Open in IMG/M
3300033486|Ga0316624_11217359All Organisms → cellular organisms → Bacteria685Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil28.96%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil27.32%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.46%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.37%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.28%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.28%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.73%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere2.73%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.19%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.64%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.09%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.09%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.09%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.09%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.09%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.09%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.55%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.55%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.55%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.55%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.55%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.55%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005893Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012406Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026475Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-AEnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027521Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12630J15595_1003602123300001545Forest SoilMVLRLGGELDGEGAAAVARLIGQSMGNLSIDFTDVQRVEEAGFAVVSQAIRRCPYKLVVRGLEHQTTKPFAPR*
JGI25385J37094_10000787103300002558Grasslands SoilMLQMVSSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEESPGRQDPISYK*
C688J35102_11776475323300002568SoilMLQMVPSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFSDVKTMETSGFDVLAQAIRRCPYRLVMRGLDGD
soilH2_1024237623300003324Sugarcane Root And Bulk SoilMLQMLPSIEDGRLVVHVGGELDDEGAAAVARIIRQSMGDFSIDFTDVKRVEDAGFAVLAQAIRRCPYKLVVRGLPQAASTYR*
Ga0063454_10000075863300004081SoilMLQMLPTIEDGHLVLHLGGDLDSEGAAAVARLIGQSMGDFAIDFTDVHRVEDSGFTVLSRAMRRCPYKLVVRGLDERPLAEVPHP*
Ga0066672_1002563913300005167SoilMLQMVSSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEESAGRQDPISYK*
Ga0066672_1100887523300005167SoilMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLAQAIRRCPYKLVVRGLQDEAGIPQDASSYR*
Ga0066677_1023619223300005171SoilMLQMLPSIEDGHVVLHLGGEIDAQSAATVAEMIDHSMGDFSLDFTDVKHVEDAGFTVLADAIRRCPYRLAVRGLPDSDLIQKIHE*
Ga0066677_1028932513300005171SoilVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAVLAQAIRRCPYKLVVRGLESQDAISYK*
Ga0066680_1033867623300005174SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEDQDAISYK*
Ga0066680_1043908623300005174SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEESPGRQDPISYK*
Ga0066673_1058407013300005175SoilMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEASFAVLSQAIRRCPYKLVVRGLEQQAGKPFA
Ga0066679_1017675523300005176SoilMLQMVSSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLAVRGLWDQDASSYK*
Ga0066690_1040540013300005177SoilPRPFAYAWRMLQMLPSIEDGHLVLRLGGEIDGEGAATVARLIGQSMGDFLIDFTDVQRVEETGFGVLAQAIRSCPYHLELRGFDHLSV*
Ga0066688_1004779443300005178SoilVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAVLAQAIRRCPYKLVVRGLEGQDAISYK*
Ga0066688_1074328023300005178SoilVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLAQAIRRCPYKLVVRGLQDEAGIPQDASSYR*
Ga0066684_1030922923300005179SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVLSQAIRRCPYKLVVRGLEQQAGKPFAPR*
Ga0066678_1016979613300005181SoilMLQMLPSIEDGHVVLHLGGEIDAQSAATVAEMIDHSMGDFSLDFTDVKHVEDAGFSVLADAIRRCPYRLAVRGLPDSDLIQKINE*
Ga0066671_1015417823300005184SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAVLAQAIRRCPYKLVVRGLEDQDAISYK*
Ga0066671_1025323123300005184SoilMLQMLPSIENGHVVLRLGGELDGEGAAAVARLIGQSMGDCLIDFTGVQRVEDDGFTVLAQAIRRCPYRLELRGFEELP*
Ga0066676_1016481813300005186SoilMLQMVSSIEDGRVVLRLGGELDSEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEDQDAISYK*
Ga0066675_1002173433300005187SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAVLAQAIRRCPYKLVVRGLESQDAISYK*
Ga0070690_10039977413300005330Switchgrass RhizosphereMLQMLPSIEDGRVVLHLGGELDGEGAAAVARLIGQSMGDFAIDFTDVKRVEDTGFAVLAQAIRRCPYRLVMRGLKEDTALPQAATSKR*
Ga0070688_10085860513300005365Switchgrass RhizosphereMLQMLPSIEDGRVVLHLGRELDGEGAAAVARLIGQSMGDFAIDFTDVKRVEDTGFAVLAQAIRRCPYRLVMRGLKED
Ga0070705_10032014613300005440Corn, Switchgrass And Miscanthus RhizosphereMLQMLPSIEDGHVVLRVGGDLDGEGAAAVARLISQSKGDFSIDFTDVKRVEDAGFDVLAQAIRRCPYKLVVRGLEDEAGNMITLKRRP*
Ga0070694_10171767913300005444Corn, Switchgrass And Miscanthus RhizosphereMLQMLPSIEDGRVVLHLGGELDGEGAAAVARLIGQSMGDFAIDFTDVKRVEDTGFAVLAQAIRRCPYRLVMRGLKEDAALPQAATSKR*
Ga0070708_10063342123300005445Corn, Switchgrass And Miscanthus RhizosphereMLQMVPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEESGFAVLAQAIRRCPYKLVVRGLGDQDAISYK*
Ga0066686_1021216823300005446SoilMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLAQAIRRCPYKLVVRGLQDEAGIPQDASTYR*
Ga0066686_1062807823300005446SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEESGFAVLAQAIRRCPYKLVVRGLGDQDAISYK*
Ga0066681_1087822823300005451SoilMLQMLPSIEDGHVVLHLGGEIDAQSAATVAEMIDHSMGDFSLDFTDVKHVEDAGFSVLADAIRRCPYRLAVRGLPDSDLIQKIHE*
Ga0066687_1093245123300005454SoilMLHVLPSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVKHVEQSGFAVLAQAIRRCPYKLVMRGLQDEAGLPQDASSYR*
Ga0070681_1042981213300005458Corn RhizosphereMLQMVSEIEDGRVLLRVRGELDGEGAAAVARLIGQSMGDFSIDFSDVKRIEDSGFAVLAQAIRRCPYRLMVRG
Ga0070699_10017022123300005518Corn, Switchgrass And Miscanthus RhizosphereAHMLQMLPSIEDGHVVLRVGGDLDGEGAAAVARLISQSKGDFSIDFTDVKRVEDAGFDVLAQAIRRCPYKLVVRGLEDEAGNMITLKRRP*
Ga0070697_10180209723300005536Corn, Switchgrass And Miscanthus RhizosphereRLGGELDGEGAAAVARLIGQSMGDFFLDFSDVKRVEQSGFAVLTQAIRRCPYKLVVRGLEDQDAISYK*
Ga0070697_10187937513300005536Corn, Switchgrass And Miscanthus RhizosphereMLPSIEDGHVVLRLGGDLDGEGAAAVARLISQSMGDFSIDFTDVKRVEDAGFDVLAQAIRRCPYKLAVRGLEEEAGKMITPKRR*
Ga0066701_1013940923300005552SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAILAQAIRRCPYKLVVRGLEGQDAISYK*
Ga0066695_1042739723300005553SoilMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLAQAIRRCPYKLVVRGLQDEAGI
Ga0066661_1076537913300005554SoilMLQMLPSIEDGRVVLRIGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLTQAIRRCPYKLVVRGLQDEAGIPQDASSYR*
Ga0066704_1010133813300005557SoilEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEDQDAISYK*
Ga0066700_1099693423300005559SoilMLQMLPSIEDGHLVLRLGGEIDGEGAATVARLIGQSMGDFLIDFTDVQRVEETGFGVLAQAIRSCPYHLELRGF
Ga0066699_1021376223300005561SoilMLQMLPSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVKHVEQSGFAVLAQAIRRCPYKLVMRGLQDEAGLPQDASSYR*
Ga0066699_1060051523300005561SoilMLQMLPSIEDGHVVLHLGGEIDAQSAATVAEMIDHSMGDFSLDFTDVKRVEDAGFSVLAEAIHRCPYKLAVRGLPDPKRLSER*
Ga0066693_1004726923300005566SoilMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVKRVEQSGFAVLSQAIRRCPYKLVVRGLQDDDGLPQDASSYR*
Ga0066702_1014110323300005575SoilMLQMLPSIEDGHVVLHLGGEIDAQSAETVAQLIDHSMGDFSLDFTDVKRVKDAGFNVLAEAIHRCPYKLAVRGLPDAKRLSGR*
Ga0066702_1054550823300005575SoilMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLAQAIRRCPYKLVVRGLQDKAGIPQDASSYR*
Ga0066708_1009114233300005576SoilMLQMLPSIEDGHVVLHLGGEIDAQSAATVAEVIDHSMGDFSLDFTDVKHVEDAGFSVLADAIRRCPYRLAVRGLPDSDLIQKIHE*
Ga0066706_1000495913300005598SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAVLAQAIRRCPYKLVVRGLE
Ga0066706_1048763123300005598SoilMLQMLPSIEDGHVVLHLGGEIDAQSAATVAEMIDHSMGDFSLDFTDVKHVEDAGFTVLADAIRRCPYRFAVRGLPDSDLIQKIHE*
Ga0075278_104468923300005893Rice Paddy SoilMLQMLPSIEDGHLVLRLGGELDSEGAAAVARLINQSMGDFAIDCTDVMRVEEAGFTVLAQAMRRCTYKLVLRGLRSAEAYEASSYR*
Ga0066652_10080913523300006046SoilMLQMLPSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFAIDFTDVRRVEDTGFDVLAQAIRRCPYKLVVRGLKSDLDPAR*
Ga0066652_10206104423300006046SoilMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLAQAIRRCPYKLVVRGLQDEAGIP
Ga0070712_10164526223300006175Corn, Switchgrass And Miscanthus RhizosphereMLQMLPSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFEIDFTDVFKVEETGFDVLAQAIRRCPYKLVVR
Ga0079222_1040834623300006755Agricultural SoilMLQMLPSIEDGHLVLRLGGELDSEGAAAVARLIGQSMGDFAIDFTDVKRVEEAGFTVLAQAMRRCPYKLVVRGLGSAPDYDASSYR*
Ga0066665_1002700833300006796SoilMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVSRVEHSGFAVLAQAIRRCPYKLVVRGLQDEAGIPQDASTYR*
Ga0066659_1017900823300006797SoilMLQMLPSIEDGHVVLRLGGDLDGEGAAAVARLIGQSMGDLSIDFTDVREVEDTGFDVLAQAIRRCPYKLVVRGLKQQTGKSL*
Ga0079221_1147611623300006804Agricultural SoilMLQMLPSIEDGHLVLRLGGELDSEGAATVARLIGQSMGDFAIDFTDVMRVEESGFNVLAQAMRRCPYKLVVRGLRGADRYEASSYR*
Ga0075425_10052728323300006854Populus RhizosphereMVQMLPSIENGHVVLRLGGEIDGEGAAAVARLIGQSMGDFALDFTDVKRVEDAGFDVLAQAIRRCPYKLVVRGLDAGTGKAFGAG*
Ga0075424_10110346123300006904Populus RhizosphereMLQMLPSIENGHVVLRLGGEIDGEGAAAVARLIGQSMGDFALDFTDVKRVEDAGFDVLAQAIRRCPYKLVVRGLDAGTGKAFGAG*
Ga0099791_1002248523300007255Vadose Zone SoilMLQMLPSIEDGHVVLRLGGDLDGEGAAAVARLIGQSMGDFSIDFTDVKRVEDAGFDVLAQAIRRCPYKLVVRGLEDEAANRVKLKPQPHLRRGSG*
Ga0099791_1010861123300007255Vadose Zone SoilMLQMVPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVLSQAIRRCPYKLVVRGLEQQAGKPFAPR*
Ga0099793_1000200853300007258Vadose Zone SoilMLQMVSSIEDGHVVLRVGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEESPGRQDPISYK*
Ga0099793_1003642913300007258Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSLDFTDVRRVEESSFIVLSQAIRRCPYKLVVRGLQQQPGNPLAPR*
Ga0099793_1007924523300007258Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVVSQAIRRCPYKLVVRGLEQQPGKPSAPR*
Ga0099793_1068128813300007258Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVLSQAIRRCPYKLVVRGLEQQPGKPFAQR*
Ga0099794_1002967233300007265Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGNLSIDFTDVQRVEESSFAVLSQAIRRCPYKLVVRGLDQQSGKPFATR*
Ga0066710_10091021923300009012Grasslands SoilMLQMLPSIEDGHLVLRLGGEIDGEGAATVARLIGQSMGDFLIDFTDVQRVEETGFGVLAQAIRSCPYHLELRGFDHLSV
Ga0066710_10294815723300009012Grasslands SoilMVLRRGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVLSQAIRRCPYKLVVRGLEQQAGKPFGPR
Ga0066710_10402101823300009012Grasslands SoilMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLAQAIRRCPYKLVVRGLQDEAGIPQD
Ga0099792_1055666723300009143Vadose Zone SoilWSYATVLSQGVRMLQMLPSIEDGHVVLRLGGDLDGEGAAAVARLIGQSMGDFSIDFTDVKRVEDAGFDVLAQAIRRCPYKLVVRGLEDQAANRVKLKP*
Ga0126374_1052481723300009792Tropical Forest SoilMLQMLPSIEDGHVVLHFGGEIDEQSAATVAGMIDHSLGDLSLDFTDVERVEDAGLTVLSEAIRRCPYKLAVRGLEMRGHPTH*
Ga0099796_1019306523300010159Vadose Zone SoilMLQMLPSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFEIDFTDVFKVEETGFDVLAQAIRQCPYKLVVRGLAAETGKSLDPR*
Ga0134063_1044124623300010335Grasslands SoilMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLAQAIRRCPYKLVVRGLQDEAGIPQDASSY
Ga0134071_1067045613300010336Grasslands SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSEVKRVEQSGFAVLAQAIRRCPYKLVVRGLEDQDAISYK*
Ga0134124_1027621233300010397Terrestrial SoilMLQMLPSIEDGRVVLHLGGELDGEGAAAVARLIGQSMGDFAIDFTDVKRVEDTGFAVLAQAIRRCPYRLVMRGLKED
Ga0134123_1313284813300010403Terrestrial SoilMLQMLPSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFEIDFTDVFKVEETGFDVLAQAIRRCPYKLVVRGLAAETGKSLGAR*
Ga0126350_1047100613300010880Boreal Forest SoilMLQMLPSIEDGHIVLHLDGDLDAQSAQAVATIIGQSKGEFSIDFTDVGRVEDAGFSVLADAIRRCPYRLVVRGLDDDSRLDAL*
Ga0137382_1098211213300012200Vadose Zone SoilMLQMLPSIEDGHVVLRLGGDLDGEGAAAVARLIGQSMGDLSIDFTDVREVEDTGFDVLAQAIRRCPYKL
Ga0137363_1014863523300012202Vadose Zone SoilMLQMLPSIEDGHVVLRLGGDLDGEGAAAVARLIGQSMGDFSIDFTDVKRVEDAGFDVLAQAIRRCPYKLVVRGLEDQAANRVKLKP*
Ga0137363_1038757213300012202Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVLSQAIRRCPYKLVVRGLEQQPGKPFATR*
Ga0137363_1049377513300012202Vadose Zone SoilMLQMVSSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRFEESGFAVLAQAIRRCPYKLVVRGLGDQDAISYK*
Ga0137399_1001098073300012203Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSLDFTDVRRVEESSFLVLSQAIRRCPYKLVVRGLQQQPGNPLAPR*
Ga0137399_1010039823300012203Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVLSQAIRRCPYKLVVRGLEQQAGKPIAPR*
Ga0137399_1052604623300012203Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVVSQAIRRCPYKLVVRGLEQQP
Ga0137362_1027967423300012205Vadose Zone SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQTGFAVLAQAIRRCPYKLVVRGLGDQDASSYK*
Ga0137362_1044856523300012205Vadose Zone SoilMLQMLPSIEDGHVVLRLGGDLDGEGAAAVARLIGQSMGDFSIDFTDVKRVEDAGFDVLAQAIRRCPYKLVVRGLEDEAVNRVKLKP*
Ga0137362_1046330013300012205Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAVVARLIGQSMGDLYIDFTDVRRVEEAGFAVLSQAIRRCPYKLVVRGLEQQTGKPSAPR*
Ga0137362_1178993413300012205Vadose Zone SoilMLQMLTSIEDGQMVLGLGGELDGEGAAVVARLIGQSMGDLSLDFTDVQRVEEAGFAVLSQAIRRCPYKLVVRGLEQQPGKPFAPR*
Ga0137376_1005361933300012208Vadose Zone SoilMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLAQAIRRCPYKLVVRGLQDEAAIPQDASSYR*
Ga0150985_10057293813300012212Avena Fatua RhizosphereMLPSIEDGHVVLHFGGEIDEQSAATVAQLIDRSMGDCALDFTDVKRVEDAGFTVLADAIRRCPYKLVVRGLDRA*
Ga0150985_10080344613300012212Avena Fatua RhizosphereILPMLQMLPSIEDGRVVLRLGGELDDEGAAAVARLIGQSMGDFAIDFTDVKRVEDTGFAVLAQAIRRCPYRLVMRGLKEEPALSQAATSKR*
Ga0150985_11124779213300012212Avena Fatua RhizosphereQMLPSIEDGHMVLRLGGELDGEGAAAVARLIGQSMGDFAIDFTDVRRVEDTGFDVLAQAIRRCPYKLVVRGLKSDLDPAR*
Ga0150985_12021305523300012212Avena Fatua RhizosphereSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFEIDFTDVFKVEETGFDVLAQAIRRCPYKLVVRGLAAETGKSLDPR*
Ga0150985_12160348923300012212Avena Fatua RhizosphereEDGHLVLRLGGELDSEGAAAVARLIGQSMGDFAIDFTDVMRVEESGFNVLAQAMRRCPYKLVVRGLRGTGGYEASSYR*
Ga0137360_1014651413300012361Vadose Zone SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAILAQAIRRCLYKLVVRGLGDQDASSYK*
Ga0137361_1000880283300012362Vadose Zone SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAVLAQAIRRCPYKLVVRGLEGQDAISYK*
Ga0134053_125107223300012406Grasslands SoilMLQMLPSIEDGHVVLRLGGDLDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAILAQAIRRCPYKLVVRGLEDQDAISYK*
Ga0150984_10639440323300012469Avena Fatua RhizosphereVVLRLGGELDDEGAAAVARLIGQSMGDFAIDFTDVKRVEDTGFAVLAQAIRRCPYRLVMRGLKEEPALPQAATSKR*
Ga0150984_10815359913300012469Avena Fatua RhizosphereMLQMVPSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFSDVKTMETSGFDVLAQAIRRCPYRLVMRGLDGDAGRALVK*
Ga0150984_11180122523300012469Avena Fatua RhizosphereMLQMLPSIEDGHLVLRLGGELDSEGAAAVARLIGQSMGDFAIDFTDVMRVEESGFNVLAQAMRRCPYKLVVRGLRGTGGYEASSYR*
Ga0150984_11405099023300012469Avena Fatua RhizosphereLGVSRKSIEDAPMLQMLPSIEDGHLVLRLGGELDSEGAATVARLIGQSMGDFAIDFTDVMRVEEAGFKVLAQAMHRCPYNLVVRGLRSTDGDQEASSYR*
Ga0137358_1006689133300012582Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEASFVVLSQAIRRCPYKLVVRGLEQQAGKPFAPR*
Ga0137397_1001676113300012685Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVVSQAIRRCPYKLVVRGLEDQPGKPSAPR*
Ga0137397_1004723133300012685Vadose Zone SoilMLQMLPSIEDGHVVLHLGGELDGEGAAAVARLIGQSKGAFELDFTDVLRVEETGFDVLAQAIRRCPYKLVVRGLAPGTGKTFGRR*
Ga0137397_1010981423300012685Vadose Zone SoilMLQMVPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVLSQAIRRCPYKLVVRGLEQQAGKPIAPR*
Ga0137397_1076081113300012685Vadose Zone SoilPGAHMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSLDFTDVRRVEESSFIVLSQAIRRCPYKLVVRGLEQQPGNPSAPR*
Ga0137397_1106066813300012685Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFTVLSQAIRRCPYKLVVRGLEQQPGKPFAPR*
Ga0137396_1050977713300012918Vadose Zone SoilPGAHMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVQRVEEAGFAVLSQAIRRCPYKLVVRGLEQQAGKPFAPR*
Ga0137394_1117664513300012922Vadose Zone SoilGQMVLRLGGELDGEGAAAVARLIGQSMGDLSLDFTDVRRVEEAGFAVVSQAIRRCPYKLVVRGLEQQPGRPSAPR*
Ga0137359_1013012923300012923Vadose Zone SoilMLQMLPSIEDGHVVLRLGGDLDGEGAAAVARLISQSMGDFSIDFTDVKRVEDVGFDVLAQAIRRCPYKLVVRGLEDEARNMIKLEP*
Ga0137359_1020346433300012923Vadose Zone SoilMLQMLPSIEDGHVVLRLGGDLDGEGAAAVARLISQSMGDFSIDFTDVKRVEGAGFDVLAQAIRRCPYKLAVRGLEEEAGKMITPKRTR*
Ga0137419_1017378123300012925Vadose Zone SoilQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTGVRRVEEAGFAVVSQAIRRCPYKLVVRGLEDQPGKPSAPR*
Ga0137419_1069666723300012925Vadose Zone SoilMLQMLPSIEDGHVVLRLGGELDGEGAAAVARLIAQSMGDFEIDFTDVFKVEETGFDVLAQAIRRCPYKLVVRGLAAETGKSLDPR*
Ga0137419_1091535213300012925Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVVSQAIRRCPYKLVVRGLEQQPGKPLAAR*
Ga0137416_1099511123300012927Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVVSQAIRRCPYKLVVRGL
Ga0137404_1069857223300012929Vadose Zone SoilMLQMLPSIEDGHVVLRLGGDLDGEGAAAVARLIGQSMGDFSIDFTDVKRVEDAGFDVLAQAIRRCPYKLVVRGLEDEAANRVKLKP*
Ga0137410_1087109013300012944Vadose Zone SoilAHMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVVSQAIRRCPYKLVVRGLEQQPGKPLAPR*
Ga0137410_1131366613300012944Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSLDFTDVRRVEEAGFAVVSQAIRRCPYKLVVRGLEQQPGRPSAPR*
Ga0134087_1053869823300012977Grasslands SoilMLQMLPSIEDGHVVLHLGGEIDAQSAATVAEMIDHSMGDFSLDFTDVKRVEDAGFTVLADAIRRCPYRLAVRGLPDSDLIQKIHE*
Ga0134075_1035803123300014154Grasslands SoilMLQMVSSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLGDQDAISYK*
Ga0137411_125251323300015052Vadose Zone SoilMLQMFPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFTVLSQAIRRCPYKLVVRGLEQQPGKPFAPR*
Ga0137418_1066065523300015241Vadose Zone SoilMLQMLPSIEDGQMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVLSQAIRLCPYKLVVRGLEQQAGKPIAPR*
Ga0134072_1028247513300015357Grasslands SoilCSMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLAQAIRRCPYKLVVRGLQDEAGIPQDASSYR*
Ga0187777_1149963713300017974Tropical PeatlandRCGQVLRMLRMVSSIEDGHLVLHVGGELDGEGAAAVARLIGQSMGDFSIDFSDVQRVEDAGFTVLSRAIRRCPYKLAVRGLPPQPDST
Ga0184605_1001562013300018027Groundwater SedimentMLQMLPSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGVAVLAQAIRRCPYKLVVRGLQDEAGIPQDASS
Ga0187788_1055633423300018032Tropical PeatlandMLRMVSSIEDGHLVLHVGGELDGEGAAAVARLIGQSMGDFCIDFSDVKNVEDAGFTVLSQAIRRCPYRLAVRGLFQPART
Ga0066667_1014441033300018433Grasslands SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEDQDAISYK
Ga0066667_1216951713300018433Grasslands SoilMLQMLPSIEDGHVVLHFGGEIDEQSAATVAQMIDRSKGDCSLDFTDVKRVEAKGFSLLAEAIKRCPYRLAVRGLKGA
Ga0066662_1028292523300018468Grasslands SoilMLQMVSSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEESPGRQDPISYK
Ga0066669_1000184863300018482Grasslands SoilMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLAQAIRRCPYKLVVRGLQDEAGIPQDASSYR
Ga0066669_1001816673300018482Grasslands SoilMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVLSQAIRRCPYKLVVRGLEQQAGKPFAPR
Ga0066669_1238664613300018482Grasslands SoilMLPSIEDGHVVLHFGGEIDEHSAATVADMINHTMGDCSLDFTGVAHVAETGLHVVTEAIRRCPYRLTVRGLPD
Ga0137408_102146043300019789Vadose Zone SoilMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVLSQAIRRCPYKLVVRGLEQQPGKPFATR
Ga0207684_1024198523300025910Corn, Switchgrass And Miscanthus RhizosphereMLQMLPSIEDGHVVLRVGGDLDGEGAAAVARLISQSKGDFSIDFTDVKRVEDAGFDVLAQAIRRCPYKLVVRGLEDEAGNMITLKRRP
Ga0207684_1047994223300025910Corn, Switchgrass And Miscanthus RhizosphereMLQMVPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEESGFAVLAQAIRRCPYKLVVRGLGDQDAISYK
Ga0207660_1109094723300025917Corn RhizosphereSEIEDGRVLLRVRGELDGEGAAAVARLIGQSMGDFSIDFSDVKRIEDSGFAVLAQAIRRCPYRLMVRGLETGFAQPASSYR
Ga0207665_1131813313300025939Corn, Switchgrass And Miscanthus RhizosphereMLQMLPSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFEIDFTDVFKVEETGFDVLAQAIRRCPYKLVVRGLAAE
Ga0209027_113206723300026300Grasslands SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEESPGRQDPISYK
Ga0209055_120216413300026309SoilGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEESPGRQDPISYK
Ga0209153_120569923300026312SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAVLAQAIRRCPYKLVVRGL
Ga0209153_123821323300026312SoilMLQMLPSIEDGHVVLHLGGELDGEGAAAVARLIGQSMGDFSIDFTDVKHVEQSGFAVLAQAIRRCPYKLVMRGLQDEAGLPQDASSYR
Ga0209686_100357593300026315SoilMLQMVSSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEESAGRQDPISYK
Ga0209471_124295413300026318SoilMLQMVSSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLAVRGLWDQDASSYK
Ga0209687_103525013300026322SoilMLQMVSSIEDGHVDLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEENPGRQDPISYK
Ga0209687_124364313300026322SoilMLQMLPSIENGHVVLRLGGELDGEGAAAVARLIGQSMGDCLIDFTGVQRVEDDGFTVLAQAIRRCPYRLELRGFEELP
Ga0209473_100989123300026330SoilMLQMVSSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAVLAQAIRRCPYKLVVRGLESQDAISYK
Ga0257147_107401513300026475SoilMLQMLPSIEDGHVVLHLGGELDGEGAAAVARLIGQSKGAFELDFTDVLKVEETGFDVLAQAIRRCPYKLVVRGLAPGTGKTFGRR
Ga0209690_101743913300026524SoilEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAILAQAIRRCPYKLVVRGLEGQDAISYK
Ga0209059_113952913300026527SoilVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEESPGRQDPISYK
Ga0209378_122521823300026528SoilMLQMLPSIEDGRVVLRIGGELDGEGAAAVARLIGQSMGDFSIDFTDVRRVEHSGFAVLTQAIRRCPYKLVVRGLQDEAGIPQDASSYR
Ga0209806_133121823300026529SoilMLQMVSSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEESPGRQ
Ga0209807_108545613300026530SoilMLQMLPSIEDGHVVLHLGGEIDAQSAATVAEMIDHSMGDFSLDFTDVKLVEDAGFNVLAEAIHRCPYKLAVRGLPDAKRLSER
Ga0209805_117872123300026542SoilPDCAARRSGRIASGAMLQMLPSIENGHVVLRLGGELDGEGAAAVARLIGQSMGDCLIDFTGVQRVEDDGFTVLAQAIRRCPYRLELRGFEELP
Ga0209156_1009335623300026547SoilSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQPGFAVLAQAIRRCPYKLVVRGLESQDAISYK
Ga0209474_1002385023300026550SoilMLQMLPSIEDGRVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVKRVEQSGFAVLSQAIRRCPYKLVVRGLQDDDGLPQDASSYR
Ga0209474_1012152023300026550SoilMLQMLPSIEDGHVVLHLGGEIDAQSAATVAEMIDHSMGDFSLDFTDVKHVEDAGFSVLADAIRRCPYRLAVRGLPDSDLIQKIHE
Ga0209474_1030191723300026550SoilMLQMLPSIENGHVVLRLGGELDGEGAAAVARLIGQSMGDCLIDFTGVQRVEDDGFTVLAQAIRRCPYRLELRGFEKLP
Ga0209648_1058894923300026551Grasslands SoilMLQMLPTIEDGHIVIHLGGDIDAESAAAVASLIDRSTSSFSIDFTGVGRVEDAGFTVLADAIRRCPYRLVLRGLEDTSRLGLA
Ga0179587_1006620123300026557Vadose Zone SoilMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVLSQAIRRCPYKLVVRGLEQQPGKPFAQR
Ga0209524_105902813300027521Forest SoilMVLRLGGELDGEGAAAVARLIGQSMGNLSIDFTDVQRVEEAGFAVVSQAIRRCPYKLVVRGLEHQTTKPFAPR
Ga0209220_120082223300027587Forest SoilMVLRLGGELDGEGAAAVARLIGQSMGNLSIDFTDVQRVEESSFAVVSQAIRRCPYKLVVRGLEHQTTKPFAPR
Ga0209076_121637413300027643Vadose Zone SoilMLQMVSSIEDGHVVLRVGGELDGEGAAAVARLIGQSMGDFSLDFSDVKRVEQSGFAVLAQAIRRCPYKLVVRGLEESPGRQDPISYK
Ga0208990_100186363300027663Forest SoilMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEASFVVLSQAIRRCPYKLVVRGLEQQPGKPFTQR
Ga0209588_101806833300027671Vadose Zone SoilMVLRLGGELDGEGAAAVARLIGQSMGNLSIDFTDVQRVEESSFAVLSQAIRRCPYKLVVRGLDQQSGKPFATR
Ga0209588_102423523300027671Vadose Zone SoilMLQMLPSIEDGHVVLRLGGDLDGEGAAAVARLIGQSMGDFSIDFTDVKRVEDAGFDVLAQAIRRCPYKLVVRGLEDEAANRVKLKP
Ga0209588_112740923300027671Vadose Zone SoilMVLRLGGELDGEGAAAVARLIGQSMGDLSLDFTDVRRVEESSFIVLSQAIRRCPYKLVVRGLQQQPGNPLAPR
Ga0208989_1026773423300027738Forest SoilMVLRLGGELDGEGAAAVARLIGQSMGDLSLDFTDVRRVEESSFIVLSQAIRRCPYKLVVRGLEEQAGKPFAPR
Ga0209689_127234423300027748SoilMLQMLPSIEDGHVVLHLGGEIDAQSAATVAEMIDHSMGDFSLDFTDVKRVEDAGFSVLAEAIHRCPYKLAVRGLPDPKR
Ga0209814_1051286223300027873Populus RhizosphereMLQMLPSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFSIDFTDVKRVEDSGFDVLAQAIRRCPYKLVVRGLEDEAANRVKLRP
Ga0209488_1014068123300027903Vadose Zone SoilMLQMLPSIEDGHVVLRLGGDLDGEGAAAVARLISQSMGDFSIDFTGVKRVEDAGFDVLAQAIRRCPYKLVVRGLEDEAAGMFTLKR
Ga0137415_1001244443300028536Vadose Zone SoilMVLRLGGELDGEGAAAVARLIGQSMGDLSIDFTDVRRVEEAGFAVVSQAIRRCPYKLVVRGLEQQPGKPSAPR
Ga0307469_1005573133300031720Hardwood Forest SoilMLQMLPSIEDGHVVLHFGGEIDAQSAETVAQLIDRSMGDFSLDFTDVKRVEDAGFGVLAEAIRRCPYKLVVRGLPL
Ga0307469_1039850823300031720Hardwood Forest SoilMLQMVPSIEDGRVVLRLGGELDGEGAATVARLIGQSMGDFSIDFSDVKRVEESGFVVLAQAIRRCPYKLVVRGLQDRQDAISYK
Ga0307468_10201444623300031740Hardwood Forest SoilMLQMLPSIEDGHVVLHFGGEIDAQSAETVAQLNDRSMGDFSLDFTDVKRVEDAGFGVLAEAIRRCPYKLVVRGLPL
Ga0307473_1029465123300031820Hardwood Forest SoilMLQMLPSIENGHVVLHLGGELDGEGAAAVARLIGQSQGAVEIDFTDVLKVEETGFDVLAQAIRRCPYKLVVRGLAPATGKTFERR
Ga0307479_1001765133300031962Hardwood Forest SoilMLQMHPSIEDGHLVLRLGGELDDEAAATVARLIGQSMGDCMIDFTEVSRVEESGFTVLSQAIRRCPYKLQLRGLQEMRALSH
Ga0308173_1088817423300032074SoilMLQMLPSIEDGHLVLRLGGELDSEGAATVARLIGQSMGDFAIDFTDVMRVEEAGFNVLAQAMRRCPYKLVVRGLRGADRYEASSYR
Ga0307471_10074124623300032180Hardwood Forest SoilMLQMLPSIEDGHVVLHLGGELDGEGAAAVARLIGQSQGAFELDFTDVLKVEETGFDVLAQAIRRCPYKLVVRGLAPATGKTFERR
Ga0307471_10095047623300032180Hardwood Forest SoilMLHMLPSIEDGHVVLRLGGDLDGEGAAAVARLISQSMGDFSIDFTDVKRVEDAGFDVLAQAIRRCPYKLAVRGLEEEAGKMITPKRR
Ga0307471_10201008213300032180Hardwood Forest SoilMLQMLPSIEDGHVVLRLGGELDGEGAAAVARLIGQSMGDFEIDFTDVFKVEETGFDVLAQAIRRCPYKLVVRGLAA
Ga0335085_1002913233300032770SoilMLRMVSSIEDGHLVLHVGGELDGEGAAAVARLIGQSMGDFCIDFSDVKNVEDAGFTVLSQAIRRCPYRLAVRGLSQPART
Ga0310810_1036476923300033412SoilMLQMLPSIEDGHLVLRLGGELDSEGAAAVARLIGQSMGDFAIDFTDVKRVEEAGFTVLAQAMRRCPYKLVVRGLGSAPDYDASSYR
Ga0326726_1003531723300033433Peat SoilMLRMLTSIEDGHVVLRVGGELDGEGAAAVARLIGQCMGDFSIDFSDVQRVEHAGFTVLAQAIRRCPYKLAVHGLKDEPSQPASS
Ga0316624_1121735913300033486SoilMLRMLPSIEDGRLVLHVGGELDGEGAAAMARIIGQSMGDFSIDFTDVKRVEDAGFTVLAQAIRRCPYKLVIRGLPQTARAYR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.