Metagenome / Metatranscriptome Family F031226

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F031226
Family Type	Metagenome / Metatranscriptome
Number of Sequences	183
Average Sequence Length	71 residues
Representative Sequence	MSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIPGATLTLHGLTELDVQPD
Number of Associated Samples	91
Number of Associated Scaffolds	183

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.16 %
% of genes near scaffold ends (potentially truncated)	28.96 %
% of genes from short scaffolds (< 2000 bps)	87.98 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.678 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (40.437 % of family members)
Environment Ontology (ENVO)	Unclassified (38.798 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.005 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 37.11% Coil/Unstructured: 62.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 183 Family Scaffolds
PF00795	CN_hydrolase	2.19
PF02021	UPF0102	1.64
PF13565	HTH_32	1.09
PF00248	Aldo_ket_red	1.09
PF11774	Lsr2	1.09
PF03793	PASTA	1.09
PF06738	ThrE	0.55
PF00106	adh_short	0.55
PF00201	UDPGT	0.55
PF05977	MFS_3	0.55
PF01636	APH	0.55
PF09364	XFP_N	0.55
PF07992	Pyr_redox_2	0.55
PF00557	Peptidase_M24	0.55
PF13518	HTH_28	0.55
PF00890	FAD_binding_2	0.55
PF00356	LacI	0.55
PF13551	HTH_29	0.55
PF03861	ANTAR	0.55
PF01695	IstB_IS21	0.55
PF13655	RVT_N	0.55
PF13673	Acetyltransf_10	0.55
PF00296	Bac_luciferase	0.55
PF00532	Peripla_BP_1	0.55
PF13508	Acetyltransf_7	0.55
PF13936	HTH_38	0.55
PF13358	DDE_3	0.55
PF13480	Acetyltransf_6	0.55
PF01568	Molydop_binding	0.55
PF12275	DUF3616	0.55
PF00782	DSPc	0.55
PF09118	GO-like_E_set	0.55
PF00561	Abhydrolase_1	0.55

COG ID	Name	Functional Category	% Frequency in 183 Family Scaffolds
COG0792	Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family	Replication, recombination and repair [L]	1.64
COG1819	UDP:flavonoid glycosyltransferase YjiC, YdhE family	Carbohydrate transport and metabolism [G]	1.09
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.55
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.55
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.55
COG2966	Uncharacterized membrane protein YjjP, DUF1212 family	Function unknown [S]	0.55
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.68 %
All Organisms	root	All Organisms	27.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.68 %
cellular organisms	root	All Organisms → cellular organisms	26.78 %
Viruses	superkingdom	All Organisms → Viruses	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.68 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	22.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.68 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.68 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	1.64 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.64 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.64 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.09 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.55 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.68 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	1.64 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.64 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.09 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.55 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.55 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.68 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	1.64 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.55 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.55 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.55 %
Curtobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium	0.55 %
Aeromicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	0.55 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.68 %
Nakamurella multipartita	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita	1.64 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → environmental samples	0.55 %
Aeromicrobium flavum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium → Aeromicrobium flavum	0.55 %
unclassified Curtobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium	0.55 %
Pseudonocardia asaccharolytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	0.55 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.55 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.68 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	1.09 %
uncultured Friedmanniella sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → environmental samples → uncultured Friedmanniella sp.	0.55 %
Curtobacterium sp. ER1/6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6	0.55 %
Aeromicrobium flavum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium → Aeromicrobium flavum	0.55 %
Pseudonocardia asaccharolytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	0.55 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.55 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908008\|FWIREl_GJ4R3DH02FI6MX	Not Available	523	Open in IMG/M
3300005329\|Ga0070683_102204122	Not Available	529	Open in IMG/M
3300005330\|Ga0070690_101036691	Not Available	648	Open in IMG/M
3300005334\|Ga0068869_102070909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium → Aeromicrobium flavum	511	Open in IMG/M
3300005335\|Ga0070666_11257093	Not Available	552	Open in IMG/M
3300005337\|Ga0070682_100015408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4430	Open in IMG/M
3300005337\|Ga0070682_100524471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	922	Open in IMG/M
3300005337\|Ga0070682_100540283	Not Available	910	Open in IMG/M
3300005338\|Ga0068868_100973590	Not Available	775	Open in IMG/M
3300005338\|Ga0068868_101467880	Not Available	638	Open in IMG/M
3300005355\|Ga0070671_101714148	Not Available	558	Open in IMG/M
3300005365\|Ga0070688_101605789	Not Available	531	Open in IMG/M
3300005456\|Ga0070678_100448336	Not Available	1130	Open in IMG/M
3300005456\|Ga0070678_101091211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300005459\|Ga0068867_100365862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1207	Open in IMG/M
3300005459\|Ga0068867_100544551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1004	Open in IMG/M
3300005459\|Ga0068867_101837440	Not Available	570	Open in IMG/M
3300005466\|Ga0070685_10115676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1659	Open in IMG/M
3300005544\|Ga0070686_101906350	Not Available	507	Open in IMG/M
3300006047\|Ga0075024_100748843	Not Available	541	Open in IMG/M
3300006050\|Ga0075028_100747551	Not Available	592	Open in IMG/M
3300006172\|Ga0075018_10770484	Not Available	525	Open in IMG/M
3300006237\|Ga0097621_101118076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	740	Open in IMG/M
3300006358\|Ga0068871_100693926	Not Available	932	Open in IMG/M
3300006358\|Ga0068871_101244673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699	Open in IMG/M
3300006642\|Ga0075521_10161802	Not Available	1052	Open in IMG/M
3300006642\|Ga0075521_10619087	Not Available	533	Open in IMG/M
3300006881\|Ga0068865_100172744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1658	Open in IMG/M
3300006881\|Ga0068865_101126944	Not Available	692	Open in IMG/M
3300009098\|Ga0105245_10699734	Not Available	1047	Open in IMG/M
3300009098\|Ga0105245_12715138	Not Available	548	Open in IMG/M
3300009101\|Ga0105247_11345161	Not Available	575	Open in IMG/M
3300009148\|Ga0105243_11082651	Not Available	809	Open in IMG/M
3300009176\|Ga0105242_11293285	Not Available	753	Open in IMG/M
3300009176\|Ga0105242_12271852	Not Available	588	Open in IMG/M
3300009551\|Ga0105238_11423383	Not Available	721	Open in IMG/M
3300009551\|Ga0105238_11668538	Not Available	668	Open in IMG/M
3300010154\|Ga0127503_11114335	Not Available	500	Open in IMG/M
3300010154\|Ga0127503_11180162	Not Available	510	Open in IMG/M
3300010154\|Ga0127503_11192147	Not Available	508	Open in IMG/M
3300010396\|Ga0134126_10853365	Not Available	1026	Open in IMG/M
3300011119\|Ga0105246_10197897	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300011119\|Ga0105246_10250958	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300011119\|Ga0105246_10844617	Not Available	816	Open in IMG/M
3300011332\|Ga0126317_10552269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1742	Open in IMG/M
3300011332\|Ga0126317_10644481	Not Available	517	Open in IMG/M
3300011332\|Ga0126317_10954169	Not Available	530	Open in IMG/M
3300012943\|Ga0164241_10007424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9814	Open in IMG/M
3300012943\|Ga0164241_10063452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2684	Open in IMG/M
3300012951\|Ga0164300_10562919	Not Available	665	Open in IMG/M
3300012951\|Ga0164300_11147660	Not Available	511	Open in IMG/M
3300012955\|Ga0164298_10099488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1536	Open in IMG/M
3300012955\|Ga0164298_10357560	Not Available	927	Open in IMG/M
3300012955\|Ga0164298_10623518	Not Available	744	Open in IMG/M
3300012955\|Ga0164298_10801200	Not Available	674	Open in IMG/M
3300012955\|Ga0164298_11411769	Not Available	539	Open in IMG/M
3300012955\|Ga0164298_11602695	Not Available	513	Open in IMG/M
3300012957\|Ga0164303_10259009	Not Available	1002	Open in IMG/M
3300012958\|Ga0164299_10103403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita	1485	Open in IMG/M
3300012958\|Ga0164299_10152156	Not Available	1282	Open in IMG/M
3300012958\|Ga0164299_10208102	Not Available	1137	Open in IMG/M
3300012960\|Ga0164301_10165393	Not Available	1371	Open in IMG/M
3300012960\|Ga0164301_10870663	Not Available	696	Open in IMG/M
3300012960\|Ga0164301_10982495	Not Available	662	Open in IMG/M
3300012961\|Ga0164302_10559359	Not Available	820	Open in IMG/M
3300012961\|Ga0164302_10712826	Not Available	745	Open in IMG/M
3300012961\|Ga0164302_11081500	Not Available	632	Open in IMG/M
3300012961\|Ga0164302_11912302	Not Available	505	Open in IMG/M
3300012984\|Ga0164309_10147402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6	1560	Open in IMG/M
3300012984\|Ga0164309_10204370	Not Available	1361	Open in IMG/M
3300012984\|Ga0164309_10601376	Not Available	859	Open in IMG/M
3300012984\|Ga0164309_10711011	All Organisms → cellular organisms → Bacteria → Terrabacteria group	798	Open in IMG/M
3300012984\|Ga0164309_11716593	Not Available	538	Open in IMG/M
3300012985\|Ga0164308_10025358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3533	Open in IMG/M
3300012985\|Ga0164308_10341003	All Organisms → Viruses → Predicted Viral	1206	Open in IMG/M
3300012985\|Ga0164308_10507242	Not Available	1010	Open in IMG/M
3300012985\|Ga0164308_11952202	Not Available	547	Open in IMG/M
3300012985\|Ga0164308_12183396	Not Available	516	Open in IMG/M
3300012986\|Ga0164304_11466083	Not Available	563	Open in IMG/M
3300012987\|Ga0164307_10048914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2414	Open in IMG/M
3300012987\|Ga0164307_10119160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1688	Open in IMG/M
3300012987\|Ga0164307_10396297	Not Available	1016	Open in IMG/M
3300012987\|Ga0164307_10878817	Not Available	719	Open in IMG/M
3300012987\|Ga0164307_11142138	Not Available	642	Open in IMG/M
3300012987\|Ga0164307_11399334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	589	Open in IMG/M
3300012987\|Ga0164307_11399516	Not Available	589	Open in IMG/M
3300012988\|Ga0164306_10013397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4312	Open in IMG/M
3300012988\|Ga0164306_10057397	Not Available	2382	Open in IMG/M
3300012988\|Ga0164306_10094356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	1935	Open in IMG/M
3300012988\|Ga0164306_10138558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1643	Open in IMG/M
3300012988\|Ga0164306_10175536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1483	Open in IMG/M
3300012988\|Ga0164306_10327207	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1128	Open in IMG/M
3300012988\|Ga0164306_10388538	Not Available	1045	Open in IMG/M
3300012988\|Ga0164306_11493345	Not Available	579	Open in IMG/M
3300013105\|Ga0157369_11907750	Not Available	603	Open in IMG/M
3300013297\|Ga0157378_10769381	Not Available	987	Open in IMG/M
3300013307\|Ga0157372_11620923	Not Available	745	Open in IMG/M
3300013307\|Ga0157372_12160629	Not Available	640	Open in IMG/M
3300013308\|Ga0157375_10041328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4451	Open in IMG/M
3300013308\|Ga0157375_10201730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2145	Open in IMG/M
3300013308\|Ga0157375_10741158	Not Available	1134	Open in IMG/M
3300013308\|Ga0157375_13488877	Not Available	523	Open in IMG/M
3300014325\|Ga0163163_10369171	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300014325\|Ga0163163_12309522	Not Available	597	Open in IMG/M
3300014326\|Ga0157380_12505912	Not Available	582	Open in IMG/M
3300014326\|Ga0157380_12741349	Not Available	559	Open in IMG/M
3300014745\|Ga0157377_11113441	Not Available	606	Open in IMG/M
3300014968\|Ga0157379_11930520	Not Available	582	Open in IMG/M
3300014969\|Ga0157376_11439513	Not Available	721	Open in IMG/M
3300014969\|Ga0157376_13056933	Not Available	507	Open in IMG/M
3300015200\|Ga0173480_11105428	Not Available	529	Open in IMG/M
3300015200\|Ga0173480_11210628	Not Available	510	Open in IMG/M
3300015371\|Ga0132258_10440673	All Organisms → cellular organisms → Bacteria	3245	Open in IMG/M
3300018432\|Ga0190275_10068018	All Organisms → cellular organisms → Bacteria	3045	Open in IMG/M
3300018432\|Ga0190275_10197555	Not Available	1900	Open in IMG/M
3300018432\|Ga0190275_10339608	Not Available	1489	Open in IMG/M
3300018432\|Ga0190275_11830085	Not Available	686	Open in IMG/M
3300018432\|Ga0190275_12925961	Not Available	552	Open in IMG/M
3300018469\|Ga0190270_13087533	Not Available	527	Open in IMG/M
3300018476\|Ga0190274_10101173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2292	Open in IMG/M
3300018476\|Ga0190274_10873715	Not Available	964	Open in IMG/M
3300018476\|Ga0190274_13480518	Not Available	531	Open in IMG/M
3300018481\|Ga0190271_10059170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3316	Open in IMG/M
3300018481\|Ga0190271_10254875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → environmental samples → uncultured Friedmanniella sp.	1790	Open in IMG/M
3300018481\|Ga0190271_10477790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1354	Open in IMG/M
3300018481\|Ga0190271_10773735	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300018481\|Ga0190271_11036527	All Organisms → cellular organisms → Bacteria → Terrabacteria group	944	Open in IMG/M
3300018481\|Ga0190271_11254211	Not Available	862	Open in IMG/M
3300018481\|Ga0190271_11974670	Not Available	693	Open in IMG/M
3300018481\|Ga0190271_13604348	Not Available	518	Open in IMG/M
3300018920\|Ga0190273_10034501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2424	Open in IMG/M
3300018920\|Ga0190273_10088343	Not Available	1698	Open in IMG/M
3300018920\|Ga0190273_10427186	Not Available	942	Open in IMG/M
3300018920\|Ga0190273_10477750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	904	Open in IMG/M
3300018920\|Ga0190273_10655180	Not Available	805	Open in IMG/M
3300020069\|Ga0197907_10371937	Not Available	587	Open in IMG/M
3300020070\|Ga0206356_11521750	Not Available	796	Open in IMG/M
3300020075\|Ga0206349_1832896	Not Available	651	Open in IMG/M
3300025899\|Ga0207642_10341147	Not Available	881	Open in IMG/M
3300025900\|Ga0207710_10343818	Not Available	759	Open in IMG/M
3300025903\|Ga0207680_11035188	Not Available	588	Open in IMG/M
3300025909\|Ga0207705_10798358	Not Available	733	Open in IMG/M
3300025924\|Ga0207694_11178339	Not Available	648	Open in IMG/M
3300025924\|Ga0207694_11513731	Not Available	566	Open in IMG/M
3300025925\|Ga0207650_10914033	Not Available	745	Open in IMG/M
3300025927\|Ga0207687_10602162	Not Available	926	Open in IMG/M
3300025927\|Ga0207687_10875654	Not Available	768	Open in IMG/M
3300025934\|Ga0207686_11816757	Not Available	504	Open in IMG/M
3300025937\|Ga0207669_10069442	Not Available	2205	Open in IMG/M
3300025937\|Ga0207669_10213032	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300025938\|Ga0207704_10174817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1545	Open in IMG/M
3300025942\|Ga0207689_10580774	Not Available	942	Open in IMG/M
3300025960\|Ga0207651_11526913	Not Available	602	Open in IMG/M
3300025986\|Ga0207658_11898918	Not Available	543	Open in IMG/M
3300026023\|Ga0207677_10975371	Not Available	767	Open in IMG/M
3300026089\|Ga0207648_12175958	Not Available	515	Open in IMG/M
3300026121\|Ga0207683_10238878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	1657	Open in IMG/M
3300026121\|Ga0207683_11011534	Not Available	771	Open in IMG/M
3300027915\|Ga0209069_10880782	Not Available	541	Open in IMG/M
3300028596\|Ga0247821_10135852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1414	Open in IMG/M
3300028596\|Ga0247821_10245327	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300028596\|Ga0247821_10768462	Not Available	633	Open in IMG/M
3300028597\|Ga0247820_10263266	Not Available	1118	Open in IMG/M
3300028597\|Ga0247820_10278095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1089	Open in IMG/M
3300028597\|Ga0247820_10340035	Not Available	991	Open in IMG/M
3300028597\|Ga0247820_10612368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	752	Open in IMG/M
3300028597\|Ga0247820_11233879	Not Available	540	Open in IMG/M
3300028608\|Ga0247819_11073539	Not Available	513	Open in IMG/M
3300028889\|Ga0247827_10175144	Not Available	1163	Open in IMG/M
3300030114\|Ga0311333_11393382	Not Available	603	Open in IMG/M
3300030988\|Ga0308183_1038273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	914	Open in IMG/M
3300031091\|Ga0308201_10265598	Not Available	597	Open in IMG/M
3300034668\|Ga0314793_156701	Not Available	519	Open in IMG/M
3300034672\|Ga0314797_076814	Not Available	651	Open in IMG/M
3300034673\|Ga0314798_136377	Not Available	550	Open in IMG/M
3300034676\|Ga0314801_133887	Not Available	586	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.03%
Host-Associated	Host-Associated	34.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.02%
Plants	Host-Associated → Plants	34.97%
Aquatic	Environmental → Aquatic	6.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.84%
Freshwater	Environmental → Aquatic → Freshwater	3.83%
Roots	Host-Associated → Plants → Roots	2.73%
Sediment	Environmental → Aquatic → Sediment	2.19%
Peat	Environmental → Terrestrial → Peat	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.10%
Loam	Environmental → Terrestrial → Soil → Loam	4.37%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.19%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.49%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.92%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.73%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.19%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	40.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.37%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	3.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.28%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.19%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.19%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.09%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.55%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908008	Soil microbial communities from sample at FACE Site Metagenome WIR_Elev2	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034672	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIREl_00793230	2124908008	Soil	MSLRKPLLPSHATHDIKRGEEIVKHGSHGRVVNSFPNWSSTTYTVEFRPQGKKHRGAVVTVSGLTESDVQPDE
Ga0070683_1022041221	3300005329	Corn Rhizosphere	MSLQTLAPVHATHDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFAPDDDPAVTLTLCGLTEHDVQPD*
Ga0070690_1010366911	3300005330	Switchgrass Rhizosphere	MPLQTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLT
Ga0068869_1020709092	3300005334	Miscanthus Rhizosphere	MSLQTLAPVHATHEIRRGHHVVEPGWHGRVVDSFPNWSSTTYSVEFTADGDPTTVLTLSGLTERDVAPD*
Ga0070666_112570931	3300005335	Switchgrass Rhizosphere	MPLQTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTELDVQPD*
Ga0070682_1000154081	3300005337	Corn Rhizosphere	RYTAVSPSAPREVTMPLQTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTELDVQPD*
Ga0070682_1005244711	3300005337	Corn Rhizosphere	LDTLCVTVRQQGVIFMSLQTLAPVHATHDIKRGEEVVRHGSHGRVVNSFPNWSSTTYSVEFAPEDDPAATLTLCGLTESDVQPD*
Ga0070682_1005402832	3300005337	Corn Rhizosphere	MSLPTLTPVHATHDLKRGPEVVRHGWHGRVVNSFPNWSSTTYSVEFAPEDDSAATLTLCGLTERDVQPD*
Ga0068868_1009735901	3300005338	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMHGLTELDVQPD*
Ga0068868_1014678802	3300005338	Miscanthus Rhizosphere	SLQTLAPVHATHDIKRGEEVVRHGSHGRVVNSFPNWSSTTYSVEFAPEEDPAATLTLCGLTESDVQPD*
Ga0070671_1017141482	3300005355	Switchgrass Rhizosphere	MTLQTLTPVHATHDLHQGHNVVRHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMHGLTELDVQPD*
Ga0070688_1016057891	3300005365	Switchgrass Rhizosphere	MSLQTLAPVHATHDIRRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTELDVQPD*
Ga0070678_1004483362	3300005456	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQRGHNIVKRGWHGRVVNAFPDWSSTTYSVEFTPEDIPGATVTMSGLTERDVQPD*
Ga0070678_1010912111	3300005456	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQRGHNIVKRGWHGRVVNTFPNWSSTTYSVEFTPEDIPGATVTMSGLTEQDVQPD*
Ga0068867_1003658622	3300005459	Miscanthus Rhizosphere	MSLQTLAPVHATHDIKRGEEVVRHGSHGRVVNSFPNWSSTTYSVEFAPADDPAATLTLCGLTELDVQPD*
Ga0068867_1005445512	3300005459	Miscanthus Rhizosphere	MSLQTLAPVHATHEIRRGHHVVEPGWHGRVVDSFPNWSSTTYSVEFTADGDPTTVLTLSGLTERGVAPD*
Ga0068867_1018374402	3300005459	Miscanthus Rhizosphere	MSLQTFAPVHATHDIQRGHNLVKHGWHGRVVDSFPSWSSTTYSVEFVPEDIPGATLTMHGLTEGDVEPD*
Ga0070685_101156763	3300005466	Switchgrass Rhizosphere	MSLQTLAPVHATHDIQRGHNIVKRGWHGRVVNAFPDWSSTTYSVEFTPEDIPGATVTMSGLTELDVQPD*
Ga0070686_1019063501	3300005544	Switchgrass Rhizosphere	LLDTLCVTARQQGVIFMSLQTLAPVHATHDIKRGEEVVRHGSHGRVVNSFPNWSSTTYSVEFAPEEDPAATLTLCGLTESDVQPD*
Ga0066790_100528512	3300005995	Soil	MTLHRGRHTVVKHGSHGTVVDSWPNWSCTTYGVEFTPEPGATVTPSGLTERDVQPD*
Ga0075024_1007488432	3300006047	Watersheds	MSLQTLTPVHATHDIQRGHNMVRVGWHGRVVNSFPNWSSTTYSVEFVPEGDPGVTLTVSGLTERDVEPD*
Ga0075028_1007475512	3300006050	Watersheds	MSLQTLTPVHATHEIHRGHNVVKVGWHGRVVNSFPNWSSTTYSVEFMPEGDPAAVLTLNGLTELDVQPD*
Ga0075018_107704841	3300006172	Watersheds	LRSVLETSLGCGGIGRYNPPHPSAPREVVMSLQTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIPGATLTMHGLTEMDVQPD*
Ga0097621_1011180762	3300006237	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQRGHNIVKRGWHGRVVNAFPNWSSTTYSVEFTPEDIPGATVTMSGLTELDVQPD*
Ga0068871_1006939262	3300006358	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQQGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMHGLTELDVQPD*
Ga0068871_1012446731	3300006358	Miscanthus Rhizosphere	MSLQTLAPVHATHDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFAPEDDPTATLTLCGLTESDVQPD*
Ga0075521_100016545	3300006642	Arctic Peat Soil	MNPPDPDPVHAMHDLSRGRTMVVKQRSHGKVGDSWPSWSSTTYSVEFIPECAPGATVTLSGLTERDVQPD*
Ga0075521_101618021	3300006642	Arctic Peat Soil	AEIQRRLPVTAHQQGVTSLSLQTLTAVHATHDLHRGRTVFIKHGSHGKVVDSWPNWSCTTYSVEFAPEGVPGATVTLSGLTERDVRLTYLPQ*
Ga0075521_106190871	3300006642	Arctic Peat Soil	MPFQTLTPVHATHDIQRGHNVVKHGWHGRVVNSFPNWSSTTYGVEFTPDGDPAAVLTLNGLTELDLQPE*
Ga0068865_1001727442	3300006881	Miscanthus Rhizosphere	MSLKTLAPVHATHDIQRGHNIVKRGWHGRVVNAFPDWSSTTYSVEFTPEDIPGATVTMSGLTERDVQPD*
Ga0068865_1011269442	3300006881	Miscanthus Rhizosphere	HATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMHGLTELDVQPD
Ga0105245_106997342	3300009098	Miscanthus Rhizosphere	MTLQTLIPVHATHDLYQGPNVVRNGWHGTVVNSFPNWSSTTYSVEFVPDGDHGVTLTMSGLTEFDVQPD*
Ga0105245_127151381	3300009098	Miscanthus Rhizosphere	MSLQTLAQVHATHDIKRGGEIVRHGWHGRVVNSFPNWSTTTYSVEFAPEDDPAATLTLCGLTESDVEPD*
Ga0105247_113451611	3300009101	Switchgrass Rhizosphere	MSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFAPDDDPAATLTLCGLTEHDVQPD*
Ga0105243_110826512	3300009148	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTERDVQPD*
Ga0105242_112932852	3300009176	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQRGHNIVKRGWHGRVVNAFPNWSSTTYSVEFTPEDIPGATVTMSGLTEQDVQPD*
Ga0105242_122718521	3300009176	Miscanthus Rhizosphere	LTTAQEQASIDSLSPSDPMESSMTLQTLAPVHATNDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFTPDDDPAAILTLCGLTERDVQPD*
Ga0105242_123622731	3300009176	Miscanthus Rhizosphere	TSLGWRVLRAIYCPSLVAPREVVMSLQTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFVAEDIAGATLTMHGLTELDVQPD*
Ga0105238_114233832	3300009551	Corn Rhizosphere	MSLQTLAPVHATHDIQQGHNVVKHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTELDVQPD*
Ga0105238_116685381	3300009551	Corn Rhizosphere	CPDAGLLDTLCVTARQQGVIFMSLQTLAPVHATHDIKRGEEVVRHGSHGRVVNSFPNWSSTTYSVEFAPADDPAATLTLCGLTESDVQPD*
Ga0127503_101440192	3300010154	Soil	RFAVISYSPHLDIPYGTPSAIYSASSSAPRESPMTLQTLAPVHATHDIQRGHNVVKHGWHGRVVNSFPNWSSTTYSVEFTPEGDPAVSLTLSGLTELDVQPD*
Ga0127503_111143351	3300010154	Soil	LTPVHATHDIKRGEEIVKHGSHGRVVNSFPNWSSTTYTVEFRPQGKKHRGAVVTVSGLTESDVQPDE*
Ga0127503_111801622	3300010154	Soil	QTLAPVHATHDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFAPEDDPAATLTLCGLTERDVQPD*
Ga0127503_111921471	3300010154	Soil	QTLAPVHATHDIYQGPNVVRHGWHGTVVNSWPNWSSTTYTVEFVRVDAPGAPLTLSGLTELDVQPD*
Ga0134126_108533652	3300010396	Terrestrial Soil	MSLQTLAPVHATHDIQRGHKVVKRGWHGRVVDSFPNWSTTTYSVQFTADGDPSMVLTISGLTERDVQAD*
Ga0105246_101978971	3300011119	Miscanthus Rhizosphere	MMSLQTFAPVHATHDIQRGHNLVKHGWHGRVVDSFPSWSSTTYSVEFVPEDIPGATLTMHGLTEGDVEPD*
Ga0105246_102509581	3300011119	Miscanthus Rhizosphere	VIFMSLQTLAPVHATHDIKRGEEVVRHGSHGRVVNSFPNWSSTTYSVEFAPEEDPAATLTLCGLTESDVQPD*
Ga0105246_108446172	3300011119	Miscanthus Rhizosphere	MSLQTLAPVHATHDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFAPDDDPAATLTLCGLTEHDVQPD*
Ga0126317_105522691	3300011332	Soil	TMTLQTLAPVHATHDIYQGPNVVRHGWHGTVVNSWPNWSSTTYTVEFIRADAPGAPLTLSGLTELDVQPD*
Ga0126317_106444811	3300011332	Soil	STMTLQTLMPVHATHDIHQGPNVVRVGWHGTVVDSFPNWSSTTYSVEFKPEDIPGVTLTMSGLTELDVQPD*
Ga0126317_109541692	3300011332	Soil	LEVSMTLQTLLPVHATRDLYQGPNVVRNGWHGTVVNSFPNWSSTTYSVEFIPDDVSGVTLTMSGLTEFDVQPD*
Ga0164241_100074246	3300012943	Soil	MSLQTLAPVHATHDIQRGHNVVRSGWHGRVVNSFPNWSSTTYSVEFTAEGDPSMILTLSGLTERDVQPD*
Ga0164241_100634524	3300012943	Soil	MTLQTLMPVHATHDLRRGHTVVRHGWHGRVVNSFPNWSSTTYSVEFTPDGDPAAVVTLSGLTERDVQPD*
Ga0164300_105629191	3300012951	Soil	MPLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIPGATLTLHGLTELDVQPD*
Ga0164300_111476601	3300012951	Soil	MSLQTLAPVHATHDIQQGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMHGLTEADVQPD*
Ga0164298_100994882	3300012955	Soil	MSLQTLAPVHATHDIQRGHKVVKRGWHGRVVDSFPNWSTTTYSVRFTADGDPSMVLTISGLTERDVQAD*
Ga0164298_103575601	3300012955	Soil	MSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFAPEDDPTATLTLCDLAERDVQPD*
Ga0164298_106235182	3300012955	Soil	MSLQTLAPVHATHDIRRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMHGLTEMDVQPD*
Ga0164298_108012001	3300012955	Soil	MTLQTLMPVHAIHDIHRGPNVVKIGWHGTVVNSFPNWSSTTYSVEFTPDDIPGVTLTMSGLTELDVQPD*
Ga0164298_114117692	3300012955	Soil	MSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIPGATLTLHGLTELDVQPD*
Ga0164298_116026951	3300012955	Soil	MSLQTLAPVHATHDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFAPEDDPTATLTLCGLTERDVQPD*
Ga0164303_102590091	3300012957	Soil	PSLLASRESTMTLQTLMPVHAIHDIHRGPNVVKIGWHGTVVNSFPNWSSTTYSVEFTPDDIPGVTLTMSGLTELDVQPD*
Ga0164299_101034031	3300012958	Soil	KVSRLRCAPAIQCPSLSAPREVIMSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIPGATLTLHGLTELDVQPD*
Ga0164299_101521564	3300012958	Soil	IDCPSLLASRESTMTLQTLMPVHAIHDIHRGPNVVKIGWHGTVVNSFPNWSSTTYSVEFTPDDIPGVTLTMSGLTELDVQPD*
Ga0164299_102081022	3300012958	Soil	MSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPDDIAGATLTMHGLTELDVQPD*
Ga0164301_101653933	3300012960	Soil	MTLQTLAPVHATHDLQQGHTIVRTGWHGRVVNSFPNWSSTTYSVEFVPDEDPAITLTLSGLTEWDVQPD*
Ga0164301_108706631	3300012960	Soil	VIFMSLQTLAPVHATHDIKRGEEVVRHGSHGRVVNSFPNWSSTTYSVEFAPADDPAATLTLCGLTELDVQPD*
Ga0164301_109824952	3300012960	Soil	MSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLT
Ga0164301_112044261	3300012960	Soil	QTLTPVHATHDLHRGPAVVVKHGSHGKVVDSWPNWSCTTYSVEFTTDGDPAAVVTMSGLTERDVQPD*
Ga0164302_105593591	3300012961	Soil	ATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTELDVQPD*
Ga0164302_107128261	3300012961	Soil	MSLQTLAPVHATHDIRRGHNVVKRGWHGRVVDSFPNWSTTTYSVQFTADGDPSMVLTISGLTERDVQAD*
Ga0164302_110815001	3300012961	Soil	MTLQTLAPVHATHDLQQGHTIVRTGWHGRVVNSFPNWSSTTYSVEFIPEDVPGATVTMSGLTEADVQPD*
Ga0164302_119123021	3300012961	Soil	ERVHATHDIQRGHNVVRHGCHGKVVDSFPDWSSTTYSVEFVPDDIAGATLTMHGLTELDVQPD*
Ga0164309_101474023	3300012984	Soil	MSLQTLAPVHATHDIRRGREVVKGGWHGRVVGSFPDWSTTTYSVQFTADGDPSVVLTLSGLTERDVQAD*
Ga0164309_102043703	3300012984	Soil	PVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIPGATLTMHGLTEMDVQPD*
Ga0164309_106013761	3300012984	Soil	SAPREVIMSLQTLERVHATHDIQRGHNVVRHGCHGKVVDSFPDWSSTTYSVEFVPDDIAGATLTMHGLTELDVQPD*
Ga0164309_107110111	3300012984	Soil	FPSLSAPREVIMSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIPGATLTLHGLTELDVQPD*
Ga0164309_117165932	3300012984	Soil	MSLQTLAPVHATHDIRRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMHGLTELDVQPD*
Ga0164308_100253583	3300012985	Soil	MSLQTLAPVHATHDIRRGREVVKRGWHGRVVDSFPNWSTTTYSVQFTADGDPSTVLTISGLTERDVQAD*
Ga0164308_103410031	3300012985	Soil	TLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIPGATLTLHGLTELDVQPD*
Ga0164308_105072421	3300012985	Soil	MSLQTLAPVHATHDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFAPDDDPAVTLTLCGLTECDVQPD*
Ga0164308_119522022	3300012985	Soil	MSAPREVTMSLQTLAPVHATHDIQQGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIPGATLTMHGLTEMDVQPD*
Ga0164308_121833962	3300012985	Soil	MPLLTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTELDVQPD*
Ga0164304_114660831	3300012986	Soil	MSLQTLAPVHATHDIKRGEEIVRPGWHGRVVNSFPNWSSTTYSVEFAPDDDPAVTLTLCGLTEHDVQPD*
Ga0164307_100489145	3300012987	Soil	SLLASRESTMTLQTLMPVHAIHDIHRGPNVVKIGWHGTVVNSFPNWSSTTYSVEFTPDDIPGVTLTMSGLTELDVQPD*
Ga0164307_101191604	3300012987	Soil	SLQTLAPVHATHDIQRGHNIVKRGWHGRVVNAFPNWSSTTYSVEFTPEDIQGATVTMSGLTELDVQPD*
Ga0164307_103962972	3300012987	Soil	MPLQTLAAVHATHDIHQGPHVVKQGWHGMIVNSFPNWSSTTYSVEFIPEGVPGATVTMSGLTEADVQPD*
Ga0164307_108788173	3300012987	Soil	SAPREVIMSLQTLAPVHATHDIQQGHDVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMHGLTELDVQPD*
Ga0164307_111421382	3300012987	Soil	MTLQTLAPVHATHDLRQGHTIVRTGWHGRVVNSFPSWSSTTYSVEFVPDEDPAITLTLSGLTEWDVQP
Ga0164307_113993342	3300012987	Soil	MSLQTLAPVHATHDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFAPEDDPTATLTLCGLTER
Ga0164307_113995163	3300012987	Soil	APRESSMSLQTLAPVHATHDIKRGEEIVCHGWHGKVVDSFPNWSSMTYSVEFAPDDDPAATITMHGLTELDVQPD*
Ga0164306_100133972	3300012988	Soil	MSLQTLAPVHATHDIRRGREVVKRGWHGRVVDSFPNWSTTTYSVRFTADGDPSTVLAISGLTERDVQAD*
Ga0164306_100573976	3300012988	Soil	VHATHDLYQGPNVVRNGWHGTVVNSFPNWSSTTYSVEFVPDGDHGVTLTMSGLTEFDVQPD*
Ga0164306_100943565	3300012988	Soil	MTLQTLAPVHATHDLRQGHTIVRTGWHGRVVNSFPSWSSTTYSVEFVPDEDPAITLTLSGLTEWDVQPD*
Ga0164306_101385582	3300012988	Soil	MSLQTLAPVHATHDIQRGHNVVRVGWHGRVVNSFPNWSSTTYSVEFVPEGDPAAVLTVSGLTERDVEPD*
Ga0164306_101755363	3300012988	Soil	MSLQTLAPVHATHDIQRGHNIVKRGWHGRVVNTFPNWSSTTYSVEFTPEDIPGATVTMSGLTELDVQPD*
Ga0164306_103272073	3300012988	Soil	MSLQTLAPVHATHDIKRGEEIVWHGWHGRVVNSFPNWSSTTYSVEFAPDDDPAVTLTLCGLTECDVQPD*
Ga0164306_103885381	3300012988	Soil	MPLQTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMHGLTELDVQPD*
Ga0164306_114933452	3300012988	Soil	LFAPREVIMSLQTLERVHATHDIQRGHNVVRHGCHGKVVDSFPDWSSTTYSVEFVPDDIAGATLTMHGLTELDVQPD*
Ga0157369_119077501	3300013105	Corn Rhizosphere	MSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTIRHRFGQTPGIRVIR*
Ga0157378_107693812	3300013297	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFVAEDIAGATLTMHGLTELDVQPD*
Ga0157372_116209231	3300013307	Corn Rhizosphere	EVTMPLQTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTELDVQPD*
Ga0157372_121606292	3300013307	Corn Rhizosphere	MSLQTLAPVHATHDIRRGHNVVKRGWHGRVVDSFPNWSTTTYSVQFTADGDPSTVLTISGLTERDVQAD*
Ga0157375_100413283	3300013308	Miscanthus Rhizosphere	MSLKTLAPVHATHDIQRGHNIVKRGWHGRVVNTFPNWSSTTYSVEFIPEDIPGATVTMSGLTERDVQPD*
Ga0157375_102017304	3300013308	Miscanthus Rhizosphere	VIFMSLQTLAPVHATHDIKRGEEVVRHGSHGRVVNSFPNWSSTTYSVEFAPEDDPAATLTLCGLTESDVQPD*
Ga0157375_107411584	3300013308	Miscanthus Rhizosphere	HDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMHGLTELDVQPD*
Ga0157375_134888772	3300013308	Miscanthus Rhizosphere	MMSLQTLAPVHATHDIQPGHNLVKHGWHGRVVDSFPSWSSTTYSVEFVPEDIPGATLTMHGLTEGDVEPD*
Ga0163163_103691712	3300014325	Switchgrass Rhizosphere	MSLQTLAPVHATHDIQRVHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPDDIAGATLTMHGLTELDVQPD*
Ga0163163_123095222	3300014325	Switchgrass Rhizosphere	VFRRASITRKAHYQGPAFLDTLSVTASQQGVILMSLPTLTPVHATHDLKRGPEVVRHGWHGRVVNSFPNWSSTTYSVEFAPEDDSAATLTLCGLTERDVQPD*
Ga0157380_125059121	3300014326	Switchgrass Rhizosphere	VTLQTLTPVHATHDIHQGPNVVKLGWHGMIVGSWPDWSSTTYSVEFAAPEGVAGAPVTMSGLTESDVQPD*
Ga0157380_127413492	3300014326	Switchgrass Rhizosphere	MTLQTLAHVHATRDLQQGHTIVKTGWHGRVVNSFPNWSSTTYSVEFVPDEDPAITLTLSGLTEWDVQPD*
Ga0157377_111134411	3300014745	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQRGHNIVKRGWHGRVVNAFPDWSSTTYSVEFTPEDIPGATVTISGLTERDVQPD*
Ga0157379_119305202	3300014968	Switchgrass Rhizosphere	MPLQTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFAPADDPATTLRLCGLTERDVQPD*
Ga0157376_114395131	3300014969	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQRGHNVVKHVWHGRVVDSFPNWSSTTYSVEFVPDDIAGATLTMHGLTELDVQPD*
Ga0157376_130569331	3300014969	Miscanthus Rhizosphere	MSLQTLTAVHATHDIKRGAEIVRHGSHGRVVNSFPNWSSTTYSVEFAPADDPAATLTLCGLTELDVQPD*
Ga0173480_111054282	3300015200	Soil	MLAADPAIDSASPLASGESHMSLQTLAPVHATHDIQRGHNTVKCGWHGRVVNSFPNWSSTTYSVEFTAEGDPTMVLTVSGLT
Ga0173480_112106282	3300015200	Soil	MSLQTLAPVHATHEIHQGHNVVRHGWHGRVVDSFPNWSSTTYSVEFVPEDIPGATLTLHGLTEADVQPD*
Ga0132258_104406732	3300015371	Arabidopsis Rhizosphere	MSLQTLAPVHATHDLQQGHTIVKTGWHGRVVNSFPNWSSTTYSVEFVPDEDPAITLTLSGLTEWDVQPD*
Ga0190275_100680181	3300018432	Soil	MSLQTLATVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEGDPAAVLTVSGLTERDVQPD
Ga0190275_101975553	3300018432	Soil	LTFQTLEHVHATHDIQQGPSLVRVGWHGTVVGSWANCSSTTYSVEFIAEGDQGGVLTMSDLTESDVEPD
Ga0190275_103396082	3300018432	Soil	MSLQTLAPVHATHDLQRGHNFVKHGWHGRVVDSFPNWSSTTYSVEFTPEGDPAASVTFSGLTESDVQPD
Ga0190275_118300851	3300018432	Soil	MTFQTLAPVHAMRDIYQGPNVVKHGWHGRVVNAFPNWSSTTYSVEFIPDDTPGVTLTMSGLTEFDVQPD
Ga0190275_129259612	3300018432	Soil	MSLQTLAPVHATHDIQRGHNLVRHGWHGRVVDLFPNWSNTTYSVEFTPEGDPAAVLTVSGLTELDVQPD
Ga0190270_130875331	3300018469	Soil	MSLQTLAPVHATHDIQRGHNLVRHGWHGRVVDSFPNWSSTTYSVEFTPEGDPAAVLTVSGLTELDVQPD
Ga0190274_101011733	3300018476	Soil	MSLQTLAPVHATHDLQRGHNFVKHGWHGRVVDSFPNWSSTTYSVAFTPEGDPAARVTFSGLTESDVQPD
Ga0190274_108737152	3300018476	Soil	MALQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFAPEDDPAAVVTLSGLTELDVQPD
Ga0190274_134805181	3300018476	Soil	MSLQTLAPVHATHEIHRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFVPEDIPGATLTLHGLTEADVQPD
Ga0190271_100591701	3300018481	Soil	TLAPVHATHDLQRGHNFVKHGWHGRVVDSFPNWSSTTYSVDFMPEGDPAARVTFSGLTESDVQPD
Ga0190271_102548753	3300018481	Soil	MTLQTLAPVHATHEIHQGHNVVKMGWHGRVVNSFPNWSSTTYSVEFVPEGVPGATVTMSGLTEVDVQPD
Ga0190271_104777901	3300018481	Soil	MTLQTLAPVHATHEIHQGHNIVKVGWHGRVVNAFRNWSSRTYGVEFIPQDAPGATVTMSGLTEGDVQPD
Ga0190271_107737352	3300018481	Soil	MSLQTLAPVHATHDIQRGHNTVKRGWHGRVVNSCPNWSRTTYSVEFTAEGDPSMVLTLSGLTELDVQPD
Ga0190271_110365272	3300018481	Soil	MSLQTLAPVHATHEIHQGHNVVRHGWHGRVVDSFPNWSSTTYSVEFVPEDIPGATLTLHGLTEADVQPD
Ga0190271_112542111	3300018481	Soil	SAPRESPMTLQTLAPVHATHDIQRGHNVVKHGWHGRVVNSFPNWSSTTYSVEFRPEGDPAVSLTLSGLTEFDVQPE
Ga0190271_119746701	3300018481	Soil	MSLETLALVHATHEIHQGHNVVEVGWHGRVVNAFPNWSSTTYSVEFVPEGIPGATVTMSGLTEWDVEPD
Ga0190271_136043482	3300018481	Soil	AIDSRSPPASRESLMTLQTLTPVHATHEIHQGHNVVMTGWHGRVVNAFPNWSSTTYSVEFVPDGDRGVTLTMSGLTEFDVQPD
Ga0190273_100345013	3300018920	Soil	MTLQTLAPVHATHDIYQGPNVVRHGWHGRVVNSFPNWSSTTYSVEFIPDGIRGVTLTMSGLTEFDVQPD
Ga0190273_100883433	3300018920	Soil	MSLQTLAPVHATHDIQRGHNLVRHGWHGRVVDSFPNWSSTTYSVEFTPEGDPAAVLTMSGLTELDVQPD
Ga0190273_104271861	3300018920	Soil	MSLQTLAPVHATHDLQRGHNFVKHGWHGRVVDSFPNWSSTTYSVEFTPEGDPAARVTFSGLTESDVQPD
Ga0190273_104777502	3300018920	Soil	MTLQTLAPVHATHDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFAPDDDPAATLTLCGLTELDVQPD
Ga0190273_106551801	3300018920	Soil	MFQTLEHVHATHDIQQGPSLVRVGWHGTVVGSWANCSSTTYSVEFIAEGDQGGVLTMSDLTESDVEPD
Ga0197907_103719371	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	QGVISMSLQTLAPVHATHDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFAPDDDPAATLTLCGLTEHDVQPD
Ga0206356_115217501	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	QGVISMSLQTLAPVHATHDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFAPDDDPAVTLTLCGLTEHDVQPD
Ga0206349_18328961	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MSLQTLAPVHATHDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFAPDDDPAATLTLCGLTEHDVQPD
Ga0208479_10988152	3300025474	Arctic Peat Soil	TPVHATHDLHRGSVVLVKHGSHGKVVDSWPNWSCTTYSVEFSPEPGDTVTLTGLTERDVQPD
Ga0209385_11809982	3300025650	Arctic Peat Soil	MNPPDPDPVHAMHDLSRGRTMVVKQRSHGKVGDSWPSWSSTTYSVEFIPECAPGATVTLSGLTERDVQPD
Ga0207642_103411472	3300025899	Miscanthus Rhizosphere	MPLQTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTELDVQPD
Ga0207710_103438182	3300025900	Switchgrass Rhizosphere	MSLQTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTELDVQPD
Ga0207680_110351881	3300025903	Switchgrass Rhizosphere	MSLQTLAPVHATHDIRRGHNVVKRGWHGRVVDSFPNWSTTTYSVQFTADGDPSMVLTISGLTERDVQAD
Ga0207705_107983582	3300025909	Corn Rhizosphere	VSLRTLTPVHATHDIHQGPNVVKFGQHGRVVGSWPNWSSTNYNVEFTPEGGVPGAPVTMSGLTESDVQ
Ga0207694_111783391	3300025924	Corn Rhizosphere	MSLQTLAPVHATHDIQQGHNVVKHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTELDVQPD
Ga0207694_115137312	3300025924	Corn Rhizosphere	MSLQTLAPVHATHDIQRGHNIVKRGWHGRVVNAFPDWSSTTYSVEFTPEDIPGATVTMSGLTERDVQPD
Ga0207650_109140331	3300025925	Switchgrass Rhizosphere	MSLQTLAPVHATHDIQRGHNVVKHGRHGRVVDSFPNWSSTTYSVEFTADGDPTTVLTLSGLTERDVAPD
Ga0207687_106021621	3300025927	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQQGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMHGLTELDVQPD
Ga0207687_108756542	3300025927	Miscanthus Rhizosphere	MSLQTLAPVHATHDIHQGPHVVKQGWHGMIVNSFPNWSSTTYSVEFIPEGVPGATVTMSGLTEADVQPD
Ga0207686_118167571	3300025934	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSTTTYSVQFTADGDPSMVLTISGLTERDVQAD
Ga0207669_100694421	3300025937	Miscanthus Rhizosphere	MPLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTELDVQPD
Ga0207669_102130322	3300025937	Miscanthus Rhizosphere	MSLKTLAPVHATHDIQRGHNIVKRGWHGRVVNTFPNWSSTTYSVEFIPEDIPGATVTMSGLTERDVQPD
Ga0207704_101748174	3300025938	Miscanthus Rhizosphere	MSLKTLAPVHATHDIQRGHNIVKRGWHGRVVNAFPDWSSTTYSVEFTPEDIPGATVTMSGLTERDVQPD
Ga0207689_105807741	3300025942	Miscanthus Rhizosphere	AIDSASPHASRESQMSLQTLAPVHATHEIRRGHHVVERGWHGRVVDSFPNWSSTTYSVEFTADGDPTTVLTLSGLTERDVAPD
Ga0207651_115269131	3300025960	Switchgrass Rhizosphere	LQTLAPVHATHDIQRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFTPEDIAGATLTMHGLTELDVQPD
Ga0207658_118989182	3300025986	Switchgrass Rhizosphere	MSLQTLAPVHATHDIRRGHNVVRHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMHGLTELDVQPD
Ga0207677_109753712	3300026023	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPEDIAGATLTMRGLTELDVQPD
Ga0207648_121759582	3300026089	Miscanthus Rhizosphere	MSLQTLAPVHATHEIRRGHHVVEPGWHGRVVDSFPNWSSTTYSVEFTADGDPTTVLTLSGLTERD
Ga0207683_102388781	3300026121	Miscanthus Rhizosphere	MSLQTLAPVHATHDIQRGHNIVKRGWHGRVVNTFPNWSSTTYSVEFTPEDIPGATVTMSGLTEQDVQPD
Ga0207683_110115342	3300026121	Miscanthus Rhizosphere	HATHDIKRGAEIVRHGSHGRVVNSFPNWSSTTYSVEFAPADDPAATLTLCGLTELDVQPD
Ga0209069_108807821	3300027915	Watersheds	MSLQTLTPVHATHDIQRGHNMVRVGWHGRVVNSFPNWSSTTYSVEFVPEGDPGVTLTVSGLTERDVEPD
Ga0247821_101358521	3300028596	Soil	MSLQTLAPVHATHDIKRGEEVVRHGSHGRVVNSFPNWSSTTYSVEFAPEDDPAATLTLCG
Ga0247821_102453273	3300028596	Soil	MSLQTLAPVHATHDIQRGHNLVRRGWHGRVVNSFPNWSSTTYSVEFTAEGDPSMVLTVSGLTERDVQPD
Ga0247821_107684621	3300028596	Soil	MSLQTLAPVHATHDIHQGPNVVKQGWHGMVVNSFPSWSSTSYSVEFIPEDIPGATLTMWGLTEADVQPD
Ga0247820_102632662	3300028597	Soil	MSLQTLAPVHATHDIKRGEEVVRHGSHGRVVNSFPNWSSTTYSVEFAPEEDPAATLTLCGLTESDVQPD
Ga0247820_102780954	3300028597	Soil	MSLQTLAPVHATHDIQRGHNIVKRGWHGRVVNAFPNWSSTTYSVEFTPEDIPGATVTMSGLTELDVQPD
Ga0247820_103400352	3300028597	Soil	MTLQMLAPVHATHDLRQGPNVVKHGWHGTVVNSWPNWSSTTYSVEFVPEDGPGAAVTLTGLTELDVQPD
Ga0247820_106123682	3300028597	Soil	MSLQTLAPVHATHDIKRGEEIVRHGWHGRVVNSFPNWSSTTYSVEFAAEDDPAATLTLCGLTESDVEPD
Ga0247820_112338791	3300028597	Soil	VTLQTLTPVHATHDIHQGPNVVKLGWHGMIVGSWPDWSSTTYSVEFAAPEGVAGAPVTMSGLTESDVQPD
Ga0247819_110735391	3300028608	Soil	MSLQTLAPVHATHEIRRGHHVVEPGWHGRVVDSFPNRSSTTYSVEFTADGDPTTVLTLSGLTERDVAPD
Ga0247827_101751442	3300028889	Soil	LAPVHATHEIRRGHHVVEPGWHGRVVDSFPNWSSTTYSVEFTADGDPTTVLTLSGLTERDVAPD
Ga0311333_113933821	3300030114	Fen	AAVHATHDIQRGHNLVKHGWHGTVVNSFPNWSSTTYSVEFIPDGDPAASLTLSGLTELDVQPD
Ga0308183_10382733	3300030988	Soil	LTFQTLEPVHATHDIQQGPNLVRLGCHGTVVRSWDNCSSTTYSVEFVTEDEHGAVLTMSDLTESDVEPD
Ga0308201_102655982	3300031091	Soil	TLQMLAPVHATHDIYQGPNVVRHGWHGTVVNSWPNWSSTTYTVQFVRADAPGAPLTLSGLTELDVQPD
Ga0314793_156701_1_207	3300034668	Soil	MTLQTLAHVHATRDLQQGHTIVKTGWHGRVVNSFPNWSSTTYSVEFVPEDIAGATLTMHGLTELDVQPD
Ga0314797_076814_408_617	3300034672	Soil	MSLQTLTPVHAIHDIHQGPNVVKQGWHGMVVNSFPNWSSTSYTVEFMPEGVPGATLTMWGLSEADVQPD
Ga0314798_136377_360_548	3300034673	Soil	MSLQTLTPVHAIHDIHQGPNVVKQGWHGMVVNSFPNWSSTSYTVEFMPEGVPGATLTMWGLSE
Ga0314801_133887_366_575	3300034676	Soil	MSLQTLAPVHATHDIQRGHNVVKHGWHGRVVDSFPNWSSTTYSVEFVPDDIAGATLTMHGLTELDVQPD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031226

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences