Metagenome / Metatranscriptome Family F031801

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F031801
Family Type	Metagenome / Metatranscriptome
Number of Sequences	181
Average Sequence Length	44 residues
Representative Sequence	IGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Number of Associated Samples	139
Number of Associated Scaffolds	181

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.55 %
% of genes near scaffold ends (potentially truncated)	98.34 %
% of genes from short scaffolds (< 2000 bps)	88.95 %
Associated GOLD sequencing projects	128
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.790 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.519 % of family members)
Environment Ontology (ENVO)	Unclassified (27.624 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.276 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.81% β-sheet: 0.00% Coil/Unstructured: 44.19%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 181 Family Scaffolds
PF14257	DUF4349	10.50
PF03544	TonB_C	4.42
PF01145	Band_7	3.31
PF04748	Polysacc_deac_2	3.31
PF06877	RraB	2.76
PF01541	GIY-YIG	2.21
PF13620	CarboxypepD_reg	1.66
PF05569	Peptidase_M56	1.66
PF07007	LprI	1.10
PF11706	zf-CGNR	1.10
PF01841	Transglut_core	1.10
PF14294	DUF4372	0.55
PF13847	Methyltransf_31	0.55
PF14833	NAD_binding_11	0.55
PF06764	DUF1223	0.55
PF07228	SpoIIE	0.55
PF08486	SpoIID	0.55
PF07609	DUF1572	0.55
PF03572	Peptidase_S41	0.55
PF12796	Ank_2	0.55
PF05163	DinB	0.55
PF00872	Transposase_mut	0.55
PF03965	Penicillinase_R	0.55
PF13229	Beta_helix	0.55
PF13358	DDE_3	0.55
PF00487	FA_desaturase	0.55
PF03683	UPF0175	0.55
PF01370	Epimerase	0.55
PF02867	Ribonuc_red_lgC	0.55

COG ID	Name	Functional Category	% Frequency in 181 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	4.42
COG2861	Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family	Carbohydrate transport and metabolism [G]	3.31
COG3076	Regulator of RNase E activity RraB	Translation, ribosomal structure and biogenesis [J]	2.76
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	1.10
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.55
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.55
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.55
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.55
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.55
COG2385	Peptidoglycan hydrolase (amidase) enhancer domain SpoIID	Cell wall/membrane/envelope biogenesis [M]	0.55
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.55
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.55
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.55
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.55
COG5429	Uncharacterized conserved protein, DUF1223 domain	Function unknown [S]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.79 %
Unclassified	root	N/A	2.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.79 %
Unclassified	root	N/A	2.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.79 %
Unclassified	root	N/A	2.21 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.53 %
Unclassified	root	N/A	2.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.66 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.55 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	22.65 %
Unclassified	root	N/A	2.21 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.55 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.65 %
Unclassified	root	N/A	2.21 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.55 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.65 %
Unclassified	root	N/A	2.21 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.55 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.65 %
Unclassified	root	N/A	2.21 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.55 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.65 %
Unclassified	root	N/A	2.21 %
unclassified Syntrophobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae	0.55 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.65 %
Unclassified	root	N/A	2.21 %
Syntrophobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae → Syntrophobacteraceae bacterium	0.55 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001089\|JGI12683J13190_1003727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1918	Open in IMG/M
3300002914\|JGI25617J43924_10112117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300003218\|JGI26339J46600_10031392	All Organisms → cellular organisms → Bacteria → Acidobacteria	1494	Open in IMG/M
3300004092\|Ga0062389_104572986	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300004152\|Ga0062386_100179507	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300004635\|Ga0062388_102416418	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300005334\|Ga0068869_100276377	All Organisms → cellular organisms → Bacteria → Acidobacteria	1349	Open in IMG/M
3300005537\|Ga0070730_10115667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1842	Open in IMG/M
3300005610\|Ga0070763_10123513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300005842\|Ga0068858_101203184	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300006031\|Ga0066651_10439030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300006046\|Ga0066652_101633964	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300006797\|Ga0066659_10002067	All Organisms → cellular organisms → Bacteria	9078	Open in IMG/M
3300007258\|Ga0099793_10071548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1569	Open in IMG/M
3300007258\|Ga0099793_10253696	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300007258\|Ga0099793_10300170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300007265\|Ga0099794_10022464	All Organisms → cellular organisms → Bacteria → Acidobacteria	2876	Open in IMG/M
3300007265\|Ga0099794_10279132	All Organisms → cellular organisms → Bacteria → Acidobacteria	864	Open in IMG/M
3300009088\|Ga0099830_10306826	All Organisms → cellular organisms → Bacteria → Acidobacteria	1268	Open in IMG/M
3300009088\|Ga0099830_11040670	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300009137\|Ga0066709_101206704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300009520\|Ga0116214_1405444	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300009764\|Ga0116134_1053004	Not Available	1545	Open in IMG/M
3300009792\|Ga0126374_10163750	All Organisms → cellular organisms → Bacteria → Acidobacteria	1365	Open in IMG/M
3300010046\|Ga0126384_11291359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300010047\|Ga0126382_11336845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300010048\|Ga0126373_10100552	All Organisms → cellular organisms → Bacteria → Acidobacteria	2673	Open in IMG/M
3300010048\|Ga0126373_11640920	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300010320\|Ga0134109_10225384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300010341\|Ga0074045_10199941	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300010343\|Ga0074044_10393552	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300010343\|Ga0074044_10900885	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300010361\|Ga0126378_10747297	All Organisms → cellular organisms → Bacteria → Acidobacteria	1089	Open in IMG/M
3300010364\|Ga0134066_10003522	All Organisms → cellular organisms → Bacteria → Acidobacteria	2753	Open in IMG/M
3300010366\|Ga0126379_11542659	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300010376\|Ga0126381_100896942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1276	Open in IMG/M
3300011270\|Ga0137391_10641032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300011271\|Ga0137393_10642801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300011271\|Ga0137393_11049102	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300012096\|Ga0137389_10248719	All Organisms → cellular organisms → Bacteria → Acidobacteria	1494	Open in IMG/M
3300012096\|Ga0137389_10625909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300012096\|Ga0137389_10783193	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300012200\|Ga0137382_10178781	All Organisms → cellular organisms → Bacteria → Acidobacteria	1451	Open in IMG/M
3300012202\|Ga0137363_10141547	All Organisms → cellular organisms → Bacteria → Acidobacteria	1880	Open in IMG/M
3300012202\|Ga0137363_10618822	All Organisms → cellular organisms → Bacteria → Acidobacteria	915	Open in IMG/M
3300012202\|Ga0137363_10668589	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300012205\|Ga0137362_10461612	Not Available	1099	Open in IMG/M
3300012205\|Ga0137362_11456545	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300012209\|Ga0137379_10165389	All Organisms → cellular organisms → Bacteria → Acidobacteria	2124	Open in IMG/M
3300012211\|Ga0137377_10183660	All Organisms → cellular organisms → Bacteria → Acidobacteria	2008	Open in IMG/M
3300012211\|Ga0137377_10612348	All Organisms → cellular organisms → Bacteria → Acidobacteria	1026	Open in IMG/M
3300012357\|Ga0137384_11187033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300012362\|Ga0137361_10034616	All Organisms → cellular organisms → Bacteria → Acidobacteria	4041	Open in IMG/M
3300012363\|Ga0137390_10561894	All Organisms → cellular organisms → Bacteria → Acidobacteria	1111	Open in IMG/M
3300012363\|Ga0137390_10754842	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300012582\|Ga0137358_11032190	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300012923\|Ga0137359_10570671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	994	Open in IMG/M
3300012925\|Ga0137419_10125818	All Organisms → cellular organisms → Bacteria → Acidobacteria	1817	Open in IMG/M
3300012925\|Ga0137419_11763650	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300012927\|Ga0137416_11528177	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300012929\|Ga0137404_10685978	All Organisms → cellular organisms → Bacteria → Acidobacteria	926	Open in IMG/M
3300012930\|Ga0137407_10459229	All Organisms → cellular organisms → Bacteria → Acidobacteria	1186	Open in IMG/M
3300012930\|Ga0137407_11718036	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300012931\|Ga0153915_10502998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1385	Open in IMG/M
3300012971\|Ga0126369_12235819	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300012984\|Ga0164309_11320283	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300014150\|Ga0134081_10241352	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300015054\|Ga0137420_1185181	All Organisms → cellular organisms → Bacteria → Acidobacteria	1342	Open in IMG/M
3300015241\|Ga0137418_10209155	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1681	Open in IMG/M
3300016294\|Ga0182041_11115638	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300016371\|Ga0182034_10158604	All Organisms → cellular organisms → Bacteria → Acidobacteria	1708	Open in IMG/M
3300016404\|Ga0182037_10274271	All Organisms → cellular organisms → Bacteria → Acidobacteria	1344	Open in IMG/M
3300017822\|Ga0187802_10045727	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300017822\|Ga0187802_10428155	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300017955\|Ga0187817_10464370	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300017972\|Ga0187781_10004281	All Organisms → cellular organisms → Bacteria → Acidobacteria	10657	Open in IMG/M
3300017974\|Ga0187777_10620026	All Organisms → cellular organisms → Bacteria → Acidobacteria	763	Open in IMG/M
3300017974\|Ga0187777_11432743	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300017993\|Ga0187823_10339338	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300017995\|Ga0187816_10057706	All Organisms → cellular organisms → Bacteria → Acidobacteria	1631	Open in IMG/M
3300018018\|Ga0187886_1365449	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300018030\|Ga0187869_10487123	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300018058\|Ga0187766_10306506	All Organisms → cellular organisms → Bacteria → Acidobacteria	1030	Open in IMG/M
3300018088\|Ga0187771_10265737	All Organisms → cellular organisms → Bacteria → Acidobacteria	1433	Open in IMG/M
3300018090\|Ga0187770_11708833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300020199\|Ga0179592_10185782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300020580\|Ga0210403_10030166	All Organisms → cellular organisms → Bacteria	4331	Open in IMG/M
3300020580\|Ga0210403_10188639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1691	Open in IMG/M
3300020580\|Ga0210403_11325165	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300020581\|Ga0210399_10128783	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300020581\|Ga0210399_10857535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300020581\|Ga0210399_11157833	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300020583\|Ga0210401_10209628	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300020583\|Ga0210401_10535169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300021046\|Ga0215015_10407199	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300021086\|Ga0179596_10468212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300021088\|Ga0210404_10403522	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300021168\|Ga0210406_10997904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300021405\|Ga0210387_10603206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300021405\|Ga0210387_11693287	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300021406\|Ga0210386_10563101	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300021420\|Ga0210394_11437651	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300021433\|Ga0210391_10130274	All Organisms → cellular organisms → Bacteria → Acidobacteria	1980	Open in IMG/M
3300021433\|Ga0210391_10548268	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300021477\|Ga0210398_11003789	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300021478\|Ga0210402_10258425	All Organisms → cellular organisms → Bacteria → Acidobacteria	1609	Open in IMG/M
3300021478\|Ga0210402_10295286	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300021479\|Ga0210410_10244799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1608	Open in IMG/M
3300021559\|Ga0210409_10261057	All Organisms → cellular organisms → Bacteria → Acidobacteria	1567	Open in IMG/M
3300021559\|Ga0210409_10799046	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300021560\|Ga0126371_10964764	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300021560\|Ga0126371_11508866	All Organisms → cellular organisms → Bacteria → Acidobacteria	800	Open in IMG/M
3300024181\|Ga0247693_1031289	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300025459\|Ga0208689_1002123	All Organisms → cellular organisms → Bacteria	9626	Open in IMG/M
3300025480\|Ga0208688_1027795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1379	Open in IMG/M
3300025915\|Ga0207693_10249723	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300025939\|Ga0207665_10352732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1111	Open in IMG/M
3300026281\|Ga0209863_10078298	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300026306\|Ga0209468_1000126	All Organisms → cellular organisms → Bacteria	36619	Open in IMG/M
3300026316\|Ga0209155_1001230	All Organisms → cellular organisms → Bacteria	12171	Open in IMG/M
3300026499\|Ga0257181_1081076	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300026528\|Ga0209378_1144348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300026529\|Ga0209806_1053977	Not Available	1874	Open in IMG/M
3300026530\|Ga0209807_1334798	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300026551\|Ga0209648_10045159	All Organisms → cellular organisms → Bacteria → Proteobacteria	3797	Open in IMG/M
3300026551\|Ga0209648_10156757	All Organisms → cellular organisms → Bacteria → Acidobacteria	1790	Open in IMG/M
3300026551\|Ga0209648_10688083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300026557\|Ga0179587_10595555	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300026845\|Ga0207760_111197	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300026854\|Ga0207727_123450	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300027381\|Ga0208983_1062343	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300027432\|Ga0209421_1010498	All Organisms → cellular organisms → Bacteria → Acidobacteria	1743	Open in IMG/M
3300027568\|Ga0208042_1176702	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300027583\|Ga0209527_1017429	Not Available	1571	Open in IMG/M
3300027591\|Ga0209733_1165570	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300027643\|Ga0209076_1073888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300027645\|Ga0209117_1068317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300027667\|Ga0209009_1169555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → unclassified Syntrophobacteraceae → Syntrophobacteraceae bacterium	555	Open in IMG/M
3300027671\|Ga0209588_1193585	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300027787\|Ga0209074_10284440	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300027862\|Ga0209701_10167267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1332	Open in IMG/M
3300027862\|Ga0209701_10194587	All Organisms → cellular organisms → Bacteria → Acidobacteria	1212	Open in IMG/M
3300027862\|Ga0209701_10660223	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300027875\|Ga0209283_10038956	All Organisms → cellular organisms → Bacteria → Acidobacteria	2991	Open in IMG/M
3300027875\|Ga0209283_10314930	All Organisms → cellular organisms → Bacteria → Acidobacteria	1031	Open in IMG/M
3300027875\|Ga0209283_10398784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300027911\|Ga0209698_11316597	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300028016\|Ga0265354_1000061	All Organisms → cellular organisms → Bacteria	17996	Open in IMG/M
3300028047\|Ga0209526_10239651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300028536\|Ga0137415_10732209	All Organisms → cellular organisms → Bacteria → Acidobacteria	800	Open in IMG/M
3300028906\|Ga0308309_11327041	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300030776\|Ga0075396_1801863	All Organisms → cellular organisms → Bacteria → Acidobacteria	1112	Open in IMG/M
3300030991\|Ga0073994_10038708	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300030991\|Ga0073994_10039315	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300030991\|Ga0073994_10069125	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300030991\|Ga0073994_10083621	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300031057\|Ga0170834_107865652	All Organisms → cellular organisms → Bacteria → Acidobacteria	6734	Open in IMG/M
3300031545\|Ga0318541_10456082	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300031668\|Ga0318542_10222931	All Organisms → cellular organisms → Bacteria → Acidobacteria	954	Open in IMG/M
3300031668\|Ga0318542_10500354	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300031682\|Ga0318560_10250673	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300031736\|Ga0318501_10449033	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300031744\|Ga0306918_10950063	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300031753\|Ga0307477_10335326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300031754\|Ga0307475_11129715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300031912\|Ga0306921_11030963	All Organisms → cellular organisms → Bacteria → Acidobacteria	926	Open in IMG/M
3300031912\|Ga0306921_12063891	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300031942\|Ga0310916_10001850	All Organisms → cellular organisms → Bacteria	12701	Open in IMG/M
3300031942\|Ga0310916_10999275	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300031954\|Ga0306926_10186849	All Organisms → cellular organisms → Bacteria → Acidobacteria	2571	Open in IMG/M
3300031981\|Ga0318531_10389988	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300032035\|Ga0310911_10728301	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300032180\|Ga0307471_100660288	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300032180\|Ga0307471_100672949	All Organisms → cellular organisms → Bacteria → Acidobacteria	1198	Open in IMG/M
3300032782\|Ga0335082_10829989	All Organisms → cellular organisms → Bacteria → Acidobacteria	786	Open in IMG/M
3300032782\|Ga0335082_10977794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300032783\|Ga0335079_11176910	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300032897\|Ga0335071_10039606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4665	Open in IMG/M
3300032954\|Ga0335083_10331154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1325	Open in IMG/M
3300033290\|Ga0318519_10946908	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300033405\|Ga0326727_10588790	All Organisms → cellular organisms → Bacteria → Acidobacteria	931	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.34%
Host-Associated	Host-Associated	1.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.50%
Aquatic	Environmental → Aquatic	8.84%
Plants	Host-Associated → Plants	1.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.95%
Freshwater	Environmental → Aquatic → Freshwater	8.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.10%
Sediment	Environmental → Aquatic → Sediment	0.55%
Peat	Environmental → Terrestrial → Peat	0.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.29%
Loam	Environmental → Terrestrial → Soil → Loam	8.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.18%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.21%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.66%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.66%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.10%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.10%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.10%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.55%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.55%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026854	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 48 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030776	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12683J13190_10037271	3300001089	Forest Soil	ERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES*
JGI25617J43924_101121173	3300002914	Grasslands Soil	LIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVET*
JGI26339J46600_100313921	3300003218	Bog Forest Soil	DFRLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVET*
Ga0062389_1045729862	3300004092	Bog Forest Soil	IDLLERVGVDFHLREVRGALEDILRLGSANIPDLWLSDDDMLEKGLVQS*
Ga0062386_1001795073	3300004152	Bog Forest Soil	IDLLGKIGVDFRLREVRGALEDILRLGSANIPDLWLSDEEMLERGLVET*
Ga0062388_1024164181	3300004635	Bog Forest Soil	GVDFHLREVRGALEDILRLGSANIPDLWLSDDDMLEKGLVQS*
Ga0068869_1002763772	3300005334	Miscanthus Rhizosphere	FRSSEVRGALEDILRLGSANIPDLWLSDEEMLRKGLVEG*
Ga0070730_101156671	3300005537	Surface Soil	FHLREVRGALEDILRLGSANIPDLWLSDEEILEKGLVES*
Ga0070763_101235131	3300005610	Soil	EVRGALEDILRLGSANIPDLWLSDEELLAKGLVES*
Ga0068858_1012031841	3300005842	Switchgrass Rhizosphere	LERIGVDFRLREVRGALEDILRLGSANIPDLWLSDDEMLERGLVEG*
Ga0066651_104390301	3300006031	Soil	IGVDFRLGDVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES*
Ga0066652_1016339641	3300006046	Soil	EVRGALEDILRLGSANFPDLWLSDEEMLEKGLVES*
Ga0066659_100020671	3300006797	Soil	RALIELLERIGVDFHLREVRGALEDILRLGSANLPDLWLSDEEMLEKGLVEW*
Ga0099793_100715481	3300007258	Vadose Zone Soil	KPVPAEGAQALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0099793_102536961	3300007258	Vadose Zone Soil	GGGFILKKERGALEDILRLGSANIPDLWLSDEELLAKGLVES*
Ga0099793_103001702	3300007258	Vadose Zone Soil	EGAQALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES*
Ga0099794_100224641	3300007265	Vadose Zone Soil	QQLIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES*
Ga0099794_102791321	3300007265	Vadose Zone Soil	QQLIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMMEKGLVES*
Ga0099830_103068261	3300009088	Vadose Zone Soil	LLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES*
Ga0099830_110406701	3300009088	Vadose Zone Soil	LERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES*
Ga0066709_1012067043	3300009137	Grasslands Soil	EAVGAQALIELLERIGVDFHLREVRGALEDILRLGSANIPGLWLTDEEILERGLVES*
Ga0116214_14054442	3300009520	Peatlands Soil	DFRLREVRGALEDILRLGSANIPDLWLSDEEILEKGLVET*
Ga0116134_10530042	3300009764	Peatland	SLIDLLGKIGVDFRLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVET*
Ga0126374_101637504	3300009792	Tropical Forest Soil	DFRLREVRGALEDILRLGSANIPDLWLSDEELLEKGLVEG*
Ga0126384_112913591	3300010046	Tropical Forest Soil	ELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG*
Ga0126382_113368451	3300010047	Tropical Forest Soil	RIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEILEKGLIESA*
Ga0126373_101005524	3300010048	Tropical Forest Soil	LIELLEQIGVDFHLREVRGALEDILRLGSANIPDLWLTDEEILEKGLVEG*
Ga0126373_116409202	3300010048	Tropical Forest Soil	LIELLEQIGVDFHLREVRGALEDILRLGSANIPDLWLTDEEVLEKGLVEG*
Ga0134109_102253841	3300010320	Grasslands Soil	LIELLERIGVDFHLREVRGALEDILRLGSANFPDLWLSDEEMLEKGLVES*
Ga0074045_101999414	3300010341	Bog Forest Soil	DFRLREVRGALEDILRLGSANIPDLWLSDEEMLERGLVETY*
Ga0074044_103935522	3300010343	Bog Forest Soil	GVDFGLAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG*
Ga0074044_109008851	3300010343	Bog Forest Soil	LREVRGALEDILRLGSANIPDLWLSDDEMLERGLVEG*
Ga0126378_107472973	3300010361	Tropical Forest Soil	ALLELLERIGVDFHLREVRGALEDILRLGSANIPDLWLTDEEILEKGLGES*
Ga0134066_100035225	3300010364	Grasslands Soil	QALIELLERIGVDFHLREVRGALKDILRLGSANIPGLWLTDEEILEKGLVES*
Ga0126379_115426592	3300010366	Tropical Forest Soil	LEKVGVDFHLREVRGALEDILRLGSANIPDLWLSDEELIESGMVQT*
Ga0126381_1008969423	3300010376	Tropical Forest Soil	LERIGVDFHLREVRGALEDILRLGSANIPDLWLTDEEILEKGLVES*
Ga0137391_106410321	3300011270	Vadose Zone Soil	LLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVET*
Ga0137393_106428012	3300011271	Vadose Zone Soil	VDFHLAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG*
Ga0137393_110491021	3300011271	Vadose Zone Soil	LAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES*
Ga0137389_102487193	3300012096	Vadose Zone Soil	GVDFHLAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG*
Ga0137389_106259093	3300012096	Vadose Zone Soil	EVRGALEDILRLGSANIPALWLSDEEMLEKGLVEE*
Ga0137389_107831931	3300012096	Vadose Zone Soil	ERIGVDFRLAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEQ*
Ga0137382_101787811	3300012200	Vadose Zone Soil	FHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG*
Ga0137363_101415473	3300012202	Vadose Zone Soil	EVRGALEDILRLGSANIPDLWLSDEELLEKGLVES*
Ga0137363_106188222	3300012202	Vadose Zone Soil	LAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG*
Ga0137363_106685891	3300012202	Vadose Zone Soil	RLREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES*
Ga0137362_104616122	3300012205	Vadose Zone Soil	EVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG*
Ga0137362_114565452	3300012205	Vadose Zone Soil	AEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG*
Ga0137379_101653895	3300012209	Vadose Zone Soil	ELLERIGVDFSLSEVRGAMEDILRLGSANIPDLWLSDEEMLEKGLVES*
Ga0137377_101836601	3300012211	Vadose Zone Soil	QALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG*
Ga0137377_106123483	3300012211	Vadose Zone Soil	QALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSEDRTGEQVD*
Ga0137384_111870331	3300012357	Vadose Zone Soil	IELLERIGVNFHLHEVRGALQDIFRLGSANIPDLWLSDEEILEKGLVEQ*
Ga0137361_100346161	3300012362	Vadose Zone Soil	VRGAMEDILRLGSANIPDLWLSDEEILEKGLVES*
Ga0137390_105618941	3300012363	Vadose Zone Soil	QALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMVEKGLVEG*
Ga0137390_107548422	3300012363	Vadose Zone Soil	GVDFRLSEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES*
Ga0137358_110321901	3300012582	Vadose Zone Soil	MLERVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES*
Ga0137359_105706711	3300012923	Vadose Zone Soil	PALAEGAQALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES*
Ga0137419_101258183	3300012925	Vadose Zone Soil	SAEGAQALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES*
Ga0137419_117636501	3300012925	Vadose Zone Soil	LERIGVDFRLCEVRGALEDILRLGSANIPDLWRSDEEMLEKGLVEG*
Ga0137416_115281771	3300012927	Vadose Zone Soil	DFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEQ*
Ga0137404_106859781	3300012929	Vadose Zone Soil	HLREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES*
Ga0137407_104592291	3300012930	Vadose Zone Soil	RIGVDFHLAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG*
Ga0137407_117180362	3300012930	Vadose Zone Soil	LERIGVNFQLAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG*
Ga0153915_105029981	3300012931	Freshwater Wetlands	VDFRHLEVRGALEDILRLGSANIPDLWLSDEELLAKGLVES*
Ga0126369_122358191	3300012971	Tropical Forest Soil	VRGALDDILRLGSANIPDLWLSDDELLARGLIEA*
Ga0164309_113202832	3300012984	Soil	VRGALEDILRLGSANIPDLWLSDEEMLEKGLVES*
Ga0134081_102413522	3300014150	Grasslands Soil	VLAEGARALIELLEGIGLDFHLREVRGALEDILRLGSANIPDLWLSDEEMFEKGLVEW*
Ga0137420_11851815	3300015054	Vadose Zone Soil	ELLERIGVDFHLAEVRGALEDILRLGSANIPDLWLSDEEILEKGLVES*
Ga0137418_102091552	3300015241	Vadose Zone Soil	FRIGEVRGALEDSLRLGSANIRGRWLSDEEMLEKGLVEG*
Ga0182041_111156382	3300016294	Soil	LREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVDV
Ga0182034_101586041	3300016371	Soil	ALIDLLEKVGVDFHLREVRGALEDILRLGSANIPDLWLSDEELIESGMVQT
Ga0182037_102742714	3300016404	Soil	GAQALIDLLEKVGVDFHLREVRGALEDILRLGSANIPDLWLSDEELIESGMVQT
Ga0187802_100457272	3300017822	Freshwater Sediment	MLAEGAQALIDLLEKVGVDFHLREVRGALEDILRLGSANIPDLWLSDEELVENGMIQT
Ga0187802_104281551	3300017822	Freshwater Sediment	EGAQALIDLLEKVGVDFHLREVRGALEDILRLGSANIPDLWLSDEELIENGMIQT
Ga0187817_104643702	3300017955	Freshwater Sediment	IGVDFRLREVRGALEDILRLGSANIPDLWLSDDEMLERGLVEG
Ga0187781_100042811	3300017972	Tropical Peatland	LREVRGALEDILRLGSANIPDLWLSDDELLEKGLVET
Ga0187777_106200261	3300017974	Tropical Peatland	IGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLEKGMIQT
Ga0187777_114327431	3300017974	Tropical Peatland	LEKIGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLEKGMIQT
Ga0187823_103393381	3300017993	Freshwater Sediment	ARAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0187816_100577062	3300017995	Freshwater Sediment	DLLEKIGVDFRLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLIDT
Ga0187886_13654492	3300018018	Peatland	LLGKIGVDFRLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVET
Ga0187869_104871232	3300018030	Peatland	VDFQLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVET
Ga0187766_103065061	3300018058	Tropical Peatland	LEKIGVDFRLREVRGALEDILRLGSANIPDLWLSDEEMLQKGLIDI
Ga0187771_102657371	3300018088	Tropical Peatland	LREVRGALEDVLRLGSANIPDLWLSDEELIESGMVQT
Ga0187770_117088332	3300018090	Tropical Peatland	LGKIGVDFRLREVRGALEDILRLGSANIPDLWLSDEEMLERGLVET
Ga0179592_101857821	3300020199	Vadose Zone Soil	IDMLEKVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES
Ga0210403_100301661	3300020580	Soil	EFGRKEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0210403_101886393	3300020580	Soil	LSEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0210403_113251651	3300020580	Soil	HLAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0210399_101287833	3300020581	Soil	LIDLLERIGVDFQLREVRGALEDILRLGSANIPDLWLSDEEMLERGLVET
Ga0210399_108575352	3300020581	Soil	IGVNFERAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0210399_111578332	3300020581	Soil	IELLERIGVDFGRKEVRGALQDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0210401_102096283	3300020583	Soil	KEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0210401_105351691	3300020583	Soil	RKEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0215015_104071992	3300021046	Soil	LLERIGVDFHLREVRGALEDILRLGSANIPGLWLTDEEILEKGLVEN
Ga0179596_104682122	3300021086	Vadose Zone Soil	VDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0210404_104035222	3300021088	Soil	ALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0210406_109979042	3300021168	Soil	REKVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES
Ga0210387_106032062	3300021405	Soil	DFRLREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES
Ga0210387_116932872	3300021405	Soil	REVRGALEDILRLGSANIPDLWLSDEELLAKGLAES
Ga0210386_105631011	3300021406	Soil	MLEKVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLAKGLAES
Ga0210394_114376512	3300021420	Soil	DMLEKVGVDFRLREVRGALEDILRLGSANIPDLWLSDDELLAKGLAES
Ga0210391_101302741	3300021433	Soil	EVRGALEDILRLGSANIPDLWLSDEELLAKGLVES
Ga0210391_105482682	3300021433	Soil	VGVDFRLREVRGALEDILRLGSANIPDLWLSDEELRAKGLAES
Ga0210398_110037892	3300021477	Soil	KEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0210402_102584253	3300021478	Soil	EVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0210402_102952861	3300021478	Soil	EVRGALEDILRLGSANIPDLWLSDEELLAKGLAES
Ga0210410_102447991	3300021479	Soil	IGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0210409_102610571	3300021559	Soil	DMLEKVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES
Ga0210409_107990461	3300021559	Soil	MLEKVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLEKGLVES
Ga0126371_109647641	3300021560	Tropical Forest Soil	VGVDFHLREVRGALEDILRLGSANIPDLWLSDEELIESGMVQT
Ga0126371_115088662	3300021560	Tropical Forest Soil	REVRGALEDILRLGSANIPDLWLSDEELLENGMIQT
Ga0247693_10312891	3300024181	Soil	LERVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES
Ga0208689_100212312	3300025459	Peatland	QLREVRGALEDILRLGSANIPDLWLSDEEMLERGLVET
Ga0208688_10277953	3300025480	Peatland	GVDFQLREVRGALEDILRLGSANIPDLWLSDEEMLERGLVET
Ga0207693_102497232	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	DFRLREVRGALEDILRLGSANIPDLWLSDDEMLERGLVEG
Ga0207665_103527321	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES
Ga0209863_100782982	3300026281	Prmafrost Soil	DFRLREVRGALEDILRLGSANIPDLWLSDDEMLEKGMIEG
Ga0209468_100012634	3300026306	Soil	LLERIGVDFRLGDVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0209155_10012301	3300026316	Soil	AEGARALIELLEGIGLDFHLREVRGALEDILRLGSANIPDLWLSDEEMFEKGLVEW
Ga0257181_10810761	3300026499	Soil	RIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0209378_11443482	3300026528	Soil	DFRLDDARGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0209806_10539771	3300026529	Soil	GDVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0209807_13347981	3300026530	Soil	IGVDFRLDDARGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0209648_100451591	3300026551	Grasslands Soil	IGVDFRLSEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0209648_101567574	3300026551	Grasslands Soil	IGVDFRLSEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0209648_106880832	3300026551	Grasslands Soil	LIDMLERVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES
Ga0179587_105955551	3300026557	Vadose Zone Soil	ERVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES
Ga0207760_1111971	3300026845	Tropical Forest Soil	EKVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLEKGMIQT
Ga0207727_1234501	3300026854	Tropical Forest Soil	GVDFRLHEVRGALEDILRLGSANIPDLWLSDEELLEKGMIQT
Ga0208983_10623432	3300027381	Forest Soil	GVDFHLAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0209421_10104981	3300027432	Forest Soil	DRIGVDFRLREVRGALEDILRLGSANIPDLWLSDEEMLEKGMIET
Ga0208042_11767022	3300027568	Peatlands Soil	GKIGVDFRLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVET
Ga0209527_10174291	3300027583	Forest Soil	AQALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0209733_11655701	3300027591	Forest Soil	FHLKEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0209076_10738882	3300027643	Vadose Zone Soil	LAEGAHALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0209117_10683171	3300027645	Forest Soil	PVPAEGAQALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0209009_11695551	3300027667	Forest Soil	ALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0209588_11935851	3300027671	Vadose Zone Soil	AQQLIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMMEKGLVES
Ga0209074_102844402	3300027787	Agricultural Soil	AQELIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVKS
Ga0209701_101672671	3300027862	Vadose Zone Soil	LIELLERVGVDFHLAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0209701_101945872	3300027862	Vadose Zone Soil	LERIGVDFHLAEVRGALEDILRLGSANIPDLWLSDEEMIEKGLVES
Ga0209701_106602231	3300027862	Vadose Zone Soil	ERIGVDFHLAEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0209283_100389561	3300027875	Vadose Zone Soil	IELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMVEKGLVEG
Ga0209283_103149302	3300027875	Vadose Zone Soil	EGAQQLIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0209283_103987842	3300027875	Vadose Zone Soil	VDFRLSEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0209698_113165971	3300027911	Watersheds	DLLERIGLDFRLREVRGALEDILRLGSANIPDLWLSDEEMVEKGLVES
Ga0265354_10000611	3300028016	Rhizosphere	GVDFHLKEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEG
Ga0209526_102396511	3300028047	Forest Soil	LAEGAQALIELLERIGVDFHLREVRGALQDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0137415_107322091	3300028536	Vadose Zone Soil	FHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0308309_113270411	3300028906	Soil	LREVRGALEDILRLGSANIPDLWLSDEEMLERGLVET
Ga0075396_18018632	3300030776	Soil	IELLERIGVEFGRKEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0073994_100387081	3300030991	Soil	LERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0073994_100393151	3300030991	Soil	AEGAQALIELLERIGVDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0073994_100691251	3300030991	Soil	VDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0073994_100836211	3300030991	Soil	VDFHLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEQ
Ga0170834_1078656529	3300031057	Forest Soil	LLEKVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLAKGLAES
Ga0318541_104560821	3300031545	Soil	VDFRLREVRGALEDILRLGSANIPDLWLSDEELLESGMVQT
Ga0318542_102229312	3300031668	Soil	IEAVGAEALLELLERIGVDFHLREVRGALEDILRLGSANIPDLWLTDEEILEKGLGES
Ga0318542_105003541	3300031668	Soil	DLLEKVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLEKGMIQT
Ga0318560_102506732	3300031682	Soil	DFRLREVRGALEDILRLGSANIPDLWLSDEELLEKGMIQT
Ga0318501_104490331	3300031736	Soil	LLEKIGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLENGMIQT
Ga0306918_109500631	3300031744	Soil	EVRGALEDILRLGSANIPDLWLSDEEMLEKGLVEK
Ga0307477_103353262	3300031753	Hardwood Forest Soil	RLREVRGALEDILRLGSANIPDLWLSDEELLEKGMIQT
Ga0307475_111297153	3300031754	Hardwood Forest Soil	VDFRLREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES
Ga0306921_110309632	3300031912	Soil	EVRGALEDILRLGSANIPDLWLSDEELLEKGMIQT
Ga0306921_120638911	3300031912	Soil	DMLEKIGVDFRLHEVRGALEDILRLGSANIPDLWLSDEELLEKGMIQT
Ga0310916_100018501	3300031942	Soil	ALLELLERIGVDFHLREVRGALEDILRLGSANIPDLWLTDEEILEKGLGES
Ga0310916_109992751	3300031942	Soil	EVRGALEDILRLGSANIPDLWLSDEELVENGMIQT
Ga0306926_101868491	3300031954	Soil	FHLREVRGALEDILRLGSANIPDLWLSDEELIESGMVQT
Ga0318531_103899881	3300031981	Soil	RLREVRGALEDILRLGSANIPDLWLSDEELLENGMIQT
Ga0310911_107283012	3300032035	Soil	ERIGVDFRLREVRGALEDILRLGSANIPDLWLSDDEMLERGLVEG
Ga0307471_1006602882	3300032180	Hardwood Forest Soil	LSEVRGALEDILRLGSANIPDLWLSDEEMLEKGLVES
Ga0307471_1006729492	3300032180	Hardwood Forest Soil	EKVGVDFRLREVRGALEDILRLGSANIPDLWLSDEELLAKGLVES
Ga0335082_108299891	3300032782	Soil	AQALIDLLEKVGVDFRLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLIDV
Ga0335082_109777941	3300032782	Soil	VDFRLREVRGALEDILRLGSANIPDLWLSDEELLEKGLAEN
Ga0335079_111769102	3300032783	Soil	REVRGALEDILRLGSANIPDLWLSDEELLEKGMVQT
Ga0335071_100396066	3300032897	Soil	VDFRLREVRGALEDILRLGSANIPDLWLSDEELVEKGMIQT
Ga0335083_103311541	3300032954	Soil	LLERIGVDFRLREVRGALEDILRLGSANIPDLWLSDEEILEKGLVET
Ga0318519_109469081	3300033290	Soil	GVDFRLREVRGALEDILRLGSANIPDLWLSDEELLENGMIQT
Ga0326727_105887902	3300033405	Peat Soil	KVGVDFRLREVRGALEDILRLGSANIPDLWLSDEEMLEKGLVET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031801

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences