Metagenome / Metatranscriptome Family F033166

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033166
Family Type	Metagenome / Metatranscriptome
Number of Sequences	178
Average Sequence Length	41 residues
Representative Sequence	DEVLDRQLVALTNQPVRELLDARYEKFRKMGQFFDLGN
Number of Associated Samples	135
Number of Associated Scaffolds	178

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.44 %
% of genes from short scaffolds (< 2000 bps)	87.64 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.079 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.023 % of family members)
Environment Ontology (ENVO)	Unclassified (35.393 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.315 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.94% β-sheet: 0.00% Coil/Unstructured: 56.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 178 Family Scaffolds
PF07238	PilZ	3.37
PF03100	CcmE	2.81
PF01979	Amidohydro_1	1.12
PF13510	Fer2_4	1.12
PF01578	Cytochrom_C_asm	1.12
PF14321	DUF4382	0.56
PF13519	VWA_2	0.56
PF13432	TPR_16	0.56
PF02633	Creatininase	0.56
PF16327	CcmF_C	0.56
PF01435	Peptidase_M48	0.56
PF13515	FUSC_2	0.56
PF00005	ABC_tran	0.56
PF02843	GARS_C	0.56
PF12852	Cupin_6	0.56
PF00762	Ferrochelatase	0.56
PF13751	DDE_Tnp_1_6	0.56
PF00691	OmpA	0.56
PF12762	DDE_Tnp_IS1595	0.56
PF12760	Zn_Tnp_IS1595	0.56
PF12704	MacB_PCD	0.56
PF00781	DAGK_cat	0.56
PF08241	Methyltransf_11	0.56
PF03379	CcmB	0.56
PF03918	CcmH	0.56
PF01814	Hemerythrin	0.56

COG ID	Name	Functional Category	% Frequency in 178 Family Scaffolds
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	2.81
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.12
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.56
COG0276	Protoheme ferro-lyase (ferrochelatase)	Coenzyme transport and metabolism [H]	0.56
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.56
COG2386	ABC-type transport system involved in cytochrome c biogenesis, permease component	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG3088	Cytochrome c-type biogenesis protein CcmH/NrfF	Posttranslational modification, protein turnover, chaperones [O]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.08 %
Unclassified	root	N/A	12.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.08 %
Unclassified	root	N/A	12.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.08 %
Unclassified	root	N/A	12.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.91 %
Unclassified	root	N/A	12.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.92 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.18 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.49 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.56 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.49 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.56 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.49 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.12 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.56 %
Actibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Actibacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.49 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.12 %
unclassified Actibacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Actibacterium → unclassified Actibacterium	0.56 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.49 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.12 %
Actibacterium sp. 188UL27-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Actibacterium → unclassified Actibacterium → Actibacterium sp. 188UL27-1	0.56 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01DB4E4	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
2228664022\|INPgaii200_c0271777	Not Available	596	Open in IMG/M
2228664022\|INPgaii200_c1145238	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101895882	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300001084\|JGI12648J13191_1014267	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300001137\|JGI12637J13337_1008266	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300001593\|JGI12635J15846_10645784	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300001686\|C688J18823_10491881	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300002245\|JGIcombinedJ26739_100210083	All Organisms → cellular organisms → Bacteria → Acidobacteria	1838	Open in IMG/M
3300002245\|JGIcombinedJ26739_100394971	All Organisms → cellular organisms → Bacteria → Acidobacteria	1262	Open in IMG/M
3300002245\|JGIcombinedJ26739_100547671	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300002245\|JGIcombinedJ26739_100785476	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300002245\|JGIcombinedJ26739_101265250	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300002245\|JGIcombinedJ26739_101473305	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300002245\|JGIcombinedJ26739_101614997	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300002916\|JGI25389J43894_1079319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300004080\|Ga0062385_10442532	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300005434\|Ga0070709_11761759	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005468\|Ga0070707_101220422	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005468\|Ga0070707_101482637	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300005533\|Ga0070734_10181542	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300005542\|Ga0070732_10247488	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300005554\|Ga0066661_10321945	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300005554\|Ga0066661_10554449	Not Available	687	Open in IMG/M
3300005555\|Ga0066692_10593532	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300005556\|Ga0066707_10982878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300005560\|Ga0066670_10005078	All Organisms → cellular organisms → Bacteria	5161	Open in IMG/M
3300005566\|Ga0066693_10120833	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300005568\|Ga0066703_10802942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300005764\|Ga0066903_108194507	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005993\|Ga0080027_10083769	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300006052\|Ga0075029_100311247	All Organisms → cellular organisms → Bacteria → Acidobacteria	1007	Open in IMG/M
3300006162\|Ga0075030_100034936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4275	Open in IMG/M
3300006174\|Ga0075014_100114750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1274	Open in IMG/M
3300006237\|Ga0097621_100010961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6657	Open in IMG/M
3300006755\|Ga0079222_11349023	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300006796\|Ga0066665_10148464	All Organisms → cellular organisms → Bacteria → Acidobacteria	1776	Open in IMG/M
3300006796\|Ga0066665_11128558	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300006904\|Ga0075424_100949285	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300007258\|Ga0099793_10036940	Not Available	2105	Open in IMG/M
3300007258\|Ga0099793_10071246	All Organisms → cellular organisms → Bacteria → Acidobacteria	1571	Open in IMG/M
3300007265\|Ga0099794_10170684	All Organisms → cellular organisms → Bacteria → Acidobacteria	1109	Open in IMG/M
3300009038\|Ga0099829_11526437	Not Available	551	Open in IMG/M
3300009088\|Ga0099830_10408636	All Organisms → cellular organisms → Bacteria → Acidobacteria	1098	Open in IMG/M
3300009089\|Ga0099828_10483257	Not Available	1117	Open in IMG/M
3300009101\|Ga0105247_11573789	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300009137\|Ga0066709_102800921	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300009174\|Ga0105241_11716653	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300009551\|Ga0105238_11272400	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300009624\|Ga0116105_1121368	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300010046\|Ga0126384_11191515	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300010048\|Ga0126373_11008043	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300010159\|Ga0099796_10277024	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010358\|Ga0126370_10872227	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300010362\|Ga0126377_12383698	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300010362\|Ga0126377_13148756	Not Available	533	Open in IMG/M
3300010375\|Ga0105239_10383725	All Organisms → cellular organisms → Bacteria → Acidobacteria	1589	Open in IMG/M
3300011269\|Ga0137392_10141259	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300011269\|Ga0137392_10954525	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300011269\|Ga0137392_11540260	Not Available	523	Open in IMG/M
3300011270\|Ga0137391_10302003	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300011270\|Ga0137391_10438740	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300011271\|Ga0137393_10064017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2913	Open in IMG/M
3300011271\|Ga0137393_10168892	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300011271\|Ga0137393_11268104	Not Available	625	Open in IMG/M
3300012198\|Ga0137364_10609064	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300012199\|Ga0137383_10092154	All Organisms → cellular organisms → Bacteria → Acidobacteria	2197	Open in IMG/M
3300012200\|Ga0137382_10375926	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300012202\|Ga0137363_10621332	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300012203\|Ga0137399_10408297	All Organisms → cellular organisms → Bacteria → Acidobacteria	1133	Open in IMG/M
3300012203\|Ga0137399_10556880	Not Available	963	Open in IMG/M
3300012203\|Ga0137399_11530831	Not Available	554	Open in IMG/M
3300012210\|Ga0137378_10064629	All Organisms → cellular organisms → Bacteria → Acidobacteria	3313	Open in IMG/M
3300012210\|Ga0137378_10584918	All Organisms → cellular organisms → Bacteria → Acidobacteria	1026	Open in IMG/M
3300012356\|Ga0137371_10230809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1446	Open in IMG/M
3300012359\|Ga0137385_11275147	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300012362\|Ga0137361_10911610	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300012363\|Ga0137390_10141741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2385	Open in IMG/M
3300012363\|Ga0137390_10211776	All Organisms → cellular organisms → Bacteria → Acidobacteria	1925	Open in IMG/M
3300012363\|Ga0137390_10361921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1431	Open in IMG/M
3300012363\|Ga0137390_10376300	All Organisms → cellular organisms → Bacteria → Acidobacteria	1400	Open in IMG/M
3300012363\|Ga0137390_11329936	Not Available	664	Open in IMG/M
3300012582\|Ga0137358_10041226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3059	Open in IMG/M
3300012582\|Ga0137358_10322505	All Organisms → cellular organisms → Bacteria → Acidobacteria	1048	Open in IMG/M
3300012918\|Ga0137396_10679469	Not Available	760	Open in IMG/M
3300012922\|Ga0137394_10196473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1722	Open in IMG/M
3300012922\|Ga0137394_10223025	Not Available	1611	Open in IMG/M
3300012923\|Ga0137359_10149722	All Organisms → cellular organisms → Bacteria → Acidobacteria	2080	Open in IMG/M
3300012923\|Ga0137359_10773325	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300012924\|Ga0137413_10348722	All Organisms → cellular organisms → Bacteria → Acidobacteria	1050	Open in IMG/M
3300012927\|Ga0137416_11737596	Not Available	569	Open in IMG/M
3300012929\|Ga0137404_10475523	All Organisms → cellular organisms → Bacteria → Acidobacteria	1112	Open in IMG/M
3300012944\|Ga0137410_10142871	All Organisms → cellular organisms → Bacteria → Acidobacteria	1816	Open in IMG/M
3300012948\|Ga0126375_10848958	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300012964\|Ga0153916_12088259	Not Available	636	Open in IMG/M
3300013306\|Ga0163162_11626685	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300014201\|Ga0181537_10901000	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300015054\|Ga0137420_1090241	Not Available	529	Open in IMG/M
3300015054\|Ga0137420_1327056	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300015241\|Ga0137418_10429725	Not Available	1071	Open in IMG/M
3300015245\|Ga0137409_10048886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4023	Open in IMG/M
3300015245\|Ga0137409_11013957	Not Available	668	Open in IMG/M
3300016270\|Ga0182036_10984199	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300016319\|Ga0182033_11543295	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300016371\|Ga0182034_10488290	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300016371\|Ga0182034_10560984	All Organisms → cellular organisms → Bacteria → Acidobacteria	959	Open in IMG/M
3300017948\|Ga0187847_10221263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Actibacterium → unclassified Actibacterium → Actibacterium sp. 188UL27-1	1031	Open in IMG/M
3300017995\|Ga0187816_10221377	Not Available	824	Open in IMG/M
3300018090\|Ga0187770_10270196	All Organisms → cellular organisms → Bacteria → Acidobacteria	1320	Open in IMG/M
3300019362\|Ga0173479_10763268	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300019789\|Ga0137408_1414403	All Organisms → cellular organisms → Bacteria → Acidobacteria	1247	Open in IMG/M
3300020170\|Ga0179594_10282170	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300020199\|Ga0179592_10476500	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300020579\|Ga0210407_10022672	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4666	Open in IMG/M
3300020579\|Ga0210407_10149578	All Organisms → cellular organisms → Bacteria → Acidobacteria	1799	Open in IMG/M
3300020579\|Ga0210407_11312508	Not Available	540	Open in IMG/M
3300020583\|Ga0210401_10090180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2883	Open in IMG/M
3300021088\|Ga0210404_10605843	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300021168\|Ga0210406_10052283	All Organisms → cellular organisms → Bacteria	3571	Open in IMG/M
3300021170\|Ga0210400_10070139	All Organisms → cellular organisms → Bacteria → Acidobacteria	2744	Open in IMG/M
3300021170\|Ga0210400_10535481	All Organisms → cellular organisms → Bacteria → Acidobacteria	966	Open in IMG/M
3300021178\|Ga0210408_10798696	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300021180\|Ga0210396_10795946	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300021180\|Ga0210396_10877013	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300021432\|Ga0210384_10664697	All Organisms → cellular organisms → Bacteria → Acidobacteria	933	Open in IMG/M
3300021433\|Ga0210391_10743470	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300021475\|Ga0210392_10759979	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300021477\|Ga0210398_10191557	All Organisms → cellular organisms → Bacteria → Acidobacteria	1666	Open in IMG/M
3300021478\|Ga0210402_11567207	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300021559\|Ga0210409_10280573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1504	Open in IMG/M
3300021559\|Ga0210409_11158968	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300021560\|Ga0126371_10124083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2611	Open in IMG/M
3300022840\|Ga0224549_1057043	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300024182\|Ga0247669_1073658	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300024225\|Ga0224572_1071785	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300025941\|Ga0207711_10194908	All Organisms → cellular organisms → Bacteria → Acidobacteria	1847	Open in IMG/M
3300026281\|Ga0209863_10071999	All Organisms → cellular organisms → Bacteria → Acidobacteria	1021	Open in IMG/M
3300026301\|Ga0209238_1007432	All Organisms → cellular organisms → Bacteria	4355	Open in IMG/M
3300026308\|Ga0209265_1001876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6322	Open in IMG/M
3300026309\|Ga0209055_1012342	All Organisms → cellular organisms → Bacteria → Acidobacteria	4413	Open in IMG/M
3300026314\|Ga0209268_1015386	All Organisms → cellular organisms → Bacteria → Acidobacteria	2926	Open in IMG/M
3300026335\|Ga0209804_1250430	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300026557\|Ga0179587_10115163	All Organisms → cellular organisms → Bacteria → Acidobacteria	1643	Open in IMG/M
3300027334\|Ga0209529_1057441	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300027521\|Ga0209524_1094904	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300027565\|Ga0209219_1064255	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300027643\|Ga0209076_1042090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1287	Open in IMG/M
3300027651\|Ga0209217_1098562	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300027671\|Ga0209588_1147750	Not Available	746	Open in IMG/M
3300027671\|Ga0209588_1178131	Not Available	667	Open in IMG/M
3300027698\|Ga0209446_1027936	All Organisms → cellular organisms → Bacteria → Acidobacteria	1411	Open in IMG/M
3300027727\|Ga0209328_10173794	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300027767\|Ga0209655_10093299	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300027783\|Ga0209448_10262062	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300027787\|Ga0209074_10451800	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300027795\|Ga0209139_10001482	All Organisms → cellular organisms → Bacteria	8685	Open in IMG/M
3300027846\|Ga0209180_10632483	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300027846\|Ga0209180_10711208	Not Available	545	Open in IMG/M
3300028047\|Ga0209526_10001904	All Organisms → cellular organisms → Bacteria	13976	Open in IMG/M
3300028047\|Ga0209526_10996173	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300028800\|Ga0265338_11182523	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300028906\|Ga0308309_10567861	All Organisms → cellular organisms → Bacteria → Acidobacteria	983	Open in IMG/M
3300029993\|Ga0302304_10044014	All Organisms → cellular organisms → Bacteria → Acidobacteria	1795	Open in IMG/M
3300030862\|Ga0265753_1129849	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300031057\|Ga0170834_103972005	All Organisms → cellular organisms → Bacteria → Acidobacteria	1384	Open in IMG/M
3300031057\|Ga0170834_108743271	All Organisms → cellular organisms → Bacteria → Acidobacteria	1008	Open in IMG/M
3300031057\|Ga0170834_110782682	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300031754\|Ga0307475_10687268	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300031754\|Ga0307475_11584194	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300031823\|Ga0307478_10267882	All Organisms → cellular organisms → Bacteria → Acidobacteria	1392	Open in IMG/M
3300031823\|Ga0307478_10833535	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300031962\|Ga0307479_11047371	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300032180\|Ga0307471_100665474	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300032180\|Ga0307471_101205424	All Organisms → cellular organisms → Bacteria → Acidobacteria	921	Open in IMG/M
3300032515\|Ga0348332_11563033	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300032805\|Ga0335078_11397665	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300032954\|Ga0335083_10982834	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300033547\|Ga0316212_1047473	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.82%
Host-Associated	Host-Associated	6.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.52%
Aquatic	Environmental → Aquatic	7.30%
Plants	Host-Associated → Plants	6.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.83%
Freshwater	Environmental → Aquatic → Freshwater	5.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.49%
Sediment	Environmental → Aquatic → Sediment	1.69%
Peat	Environmental → Terrestrial → Peat	1.12%
Roots	Host-Associated → Plants → Roots	1.12%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.10%
Loam	Environmental → Terrestrial → Soil → Loam	12.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.12%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.56%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.56%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.12%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.12%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.12%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.56%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.56%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.56%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.25%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.12%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.12%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.12%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.12%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.56%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.56%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.56%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.56%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_6477550	2032320005	Soil	DDVLERQLVTLVNQPIRDLLNARYEKFRKMGQFFDLVGS
INPgaii200_02717772	2228664022	Soil	EATARFLDEVLDRQLVELTNQPVRDLVDARYEKFRRMGQYFDLGN
INPgaii200_11452381	2228664022	Soil	LEEVLDRQLTELTSEPTNVLVQSRYKKFRQMGQYFDLQV
INPhiseqgaiiFebDRAFT_1018958821	3300000364	Soil	RFLDTVLDRQLVMLTNQSTKDLLDARYEKFRKMGQFFTS*
JGI12648J13191_10142672	3300001084	Forest Soil	LLDEVLDRQLVALANETTKDLLDARYEKFRKMGQFFDLGS*
JGI12637J13337_10082661	3300001137	Forest Soil	LDTVLDRQLVMLTNQSTKDLLNARYEKFRKMGQFFTS*
JGI12635J15846_106457842	3300001593	Forest Soil	AVLDRQLLMLSQQPQKELLDARYEKFRKMGQFFDLGS*
C688J18823_104918812	3300001686	Soil	RSLDAVLDRQLMAVSSQSTKEMLDARYEKFRNMGQFFDIGA*
JGIcombinedJ26739_1002100831	3300002245	Forest Soil	DEVLDRQLAALTNQPIRELLQARYEKFRKMGQFFDLGN*
JGIcombinedJ26739_1003949711	3300002245	Forest Soil	RLLDAVLDRQLLMLSQQPQKELLDARYEKFRKMGQFFDLG*
JGIcombinedJ26739_1005476711	3300002245	Forest Soil	SHLLDAVLDRQLLMLSQQPQKELLDARYEKFRKMGQFFDLGN*
JGIcombinedJ26739_1007854761	3300002245	Forest Soil	SNHERAAQLLDEVLDRQLVALLNQSPRDLLAMRHDKFRLMGQFFEMK*
JGIcombinedJ26739_1012652501	3300002245	Forest Soil	EATARLLDIVLDRQLVALTNESTKDLLDARYEKFRKMGQFFDLGS*
JGIcombinedJ26739_1014733052	3300002245	Forest Soil	DYEAAARLLDAVLDRQLVALTNQSVRDLLDARYEKFRRMGQYFENVS*
JGIcombinedJ26739_1016149971	3300002245	Forest Soil	LDTVLERQLLMLSQQPQKELLEARYEKFRKMGQFFDLGS*
JGI25389J43894_10793192	3300002916	Grasslands Soil	LDEALDRQLVSLAHESVRELLDARYEKFRKMGQFFDLGN*
Ga0062385_104425322	3300004080	Bog Forest Soil	DEILNRQLIALSHQPLKSILDARYDKFRKMGQFFDFVSR*
Ga0070709_117617591	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	EAASRLLDAVLDRQLLMLSQQPQKELLEARYEKFRKMGQFFDLG*
Ga0070707_1012204221	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DDVLDRQLVALTNQPIRELLDARYEKFRKMGQFFDVRND*
Ga0070707_1014826371	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	HMDADESARILGEVLDRQLVALSNQPVKDRLSARYEKFRRMGQFFNLGT*
Ga0070734_101815423	3300005533	Surface Soil	TDFDTTAKLLDQVLDRQLTALVNQPTRELLEARYEKFRRMGQYFDFGGVR*
Ga0070732_102474881	3300005542	Surface Soil	ADYEASARFLDTVLDRQLVMLTNQSTKDLLAARYEKFRKMGQFFDNAS*
Ga0066661_103219451	3300005554	Soil	RLLDEVLDRQLVALTNQPVPELLDARYEKFRKMGQFFDLGN*
Ga0066661_105544492	3300005554	Soil	DEVLDRQLVALTNQPIRELLDARYEKFRNMGQFFDLGN*
Ga0066692_105935321	3300005555	Soil	RFLDEVLDRQLVSLAHEPVRELLDARYEKFRKMGQFFDLGN*
Ga0066707_109828781	3300005556	Soil	DEVLDRQLVSLAHEPVRELLDARYEKFRKMGQFFDLGN*
Ga0066670_100050786	3300005560	Soil	AAARLLDEVLDRQLVALSHEPTRQLLDARYEKFRKMGQFFDLASS*
Ga0066693_101208333	3300005566	Soil	AARLLEEVLDRQLVELTSQPAKDLVEARYKKFREMGQYFDLHGS*
Ga0066703_108029421	3300005568	Soil	ARFLDEVLDRQLVLLTNQPIAGLLDARHEKFRKMGQFFDLGH*
Ga0066903_1081945071	3300005764	Tropical Forest Soil	DYEAAARLLEEVLDRQLVELVSQPTKDLLDSRYEKFRKMGQFFDLQA*
Ga0080027_100837693	3300005993	Prmafrost Soil	SRLLDAVLERQLLMLSEQPQKNLLDARYEKFRKMGQFFEISN*
Ga0075029_1003112474	3300006052	Watersheds	LGEVLDRELVAVSQQSTKDLLEARYEKFRKMGQYFDFGN*
Ga0075030_1000349367	3300006162	Watersheds	EVLDRQLTELALQSPRDLISSRYDKFRKMGQFFDLRN*
Ga0075014_1001147503	3300006174	Watersheds	HEAAARALDEVLDRQLTELALQSPRDLISSRYDKFRKMGQFFDLRN*
Ga0097621_1000109611	3300006237	Miscanthus Rhizosphere	AHTDLEAAARFLEEVLDRQLIELLNEPVTGLVSARYEKFRKMGQFFDLQA*
Ga0079222_113490232	3300006755	Agricultural Soil	LDDVLERQLVTLVNQPIRDLVNARYEKFRKMGQFFDLVGS*
Ga0066665_101484641	3300006796	Soil	VLDRQLAALTNQPIRELLEARYEKFRKMGQFFDLGN*
Ga0066665_111285582	3300006796	Soil	ARLLDEVLDRQLVALTNQPVPELLDARYEKFRKMGQFFDLGN*
Ga0075424_1009492851	3300006904	Populus Rhizosphere	RSLDAVLDRQLMALSNQPTKELLDARYEKFRNMGQFFDLGA*
Ga0099793_100369403	3300007258	Vadose Zone Soil	DEVLDRQLVALTNQPVRELLDARYEKFRKMGQFFDLGN*
Ga0099793_100712464	3300007258	Vadose Zone Soil	LDRQLVKLSNEPVKDLLDARYQKFRNMGQYFDHG*
Ga0099794_101706843	3300007265	Vadose Zone Soil	RFLDEVLDRQLVALTNQPPRELLDARYEKFRKMGQFFDLGN*
Ga0099829_115264371	3300009038	Vadose Zone Soil	DEVLDRQLVALTNQPLRELLDARYEKFRKMGQFFDLGN*
Ga0099830_104086361	3300009088	Vadose Zone Soil	ASARILDEVLDRQLVALSNQPIRELLDARYEKFRRMGQFFDLANS*
Ga0099828_104832571	3300009089	Vadose Zone Soil	ARFLDEVLDRQLVALTNQPLRELLDARYEKFRKMGQFFDLGN*
Ga0105247_115737892	3300009101	Switchgrass Rhizosphere	VEAAARLLEEVLDRQLVELLNEPMTSLVSSRYDKFRKMGQFFDMQS*
Ga0066709_1028009211	3300009137	Grasslands Soil	TAARFLEEVLDRQLVELLNQPVTSLVSARYEKFRKMGQFFDLQA*
Ga0105241_117166532	3300009174	Corn Rhizosphere	TDLEAAARFLEEVLDCQLIELLNEPVTSLVSARYDKFRKMGQFFDLQA*
Ga0105238_112724002	3300009551	Corn Rhizosphere	SPEDAAKLLDEVLDRQLMALSNESTKDLLDARYEKFRKMGQFFDLGN*
Ga0116105_11213682	3300009624	Peatland	LDEVLDRQLVALTNETTKDLSDARYEKFRKMGQFFDLGS*
Ga0126384_111915151	3300010046	Tropical Forest Soil	AKLLDEVLDRQLMALSNESMKDLLDAGYEKFRMMGQYFDLGN*
Ga0126373_110080431	3300010048	Tropical Forest Soil	RLLDDVLDRQLVALTNEPIRVLLALRYEKFRKMGQFFDLPNG*
Ga0099796_102770242	3300010159	Vadose Zone Soil	LDEVLDRQLVALTNQPIQELLDARYDKFRRMGQFFDLGN*
Ga0126370_108722271	3300010358	Tropical Forest Soil	LDEVLDRQLVTLTNQPVKDLLDARYEKFRRMGQFFDLINP*
Ga0126377_123836982	3300010362	Tropical Forest Soil	AARLLEEVLDRQLVELLNEPVKSLLSARYEKFRRMGQFFDLQS*
Ga0126377_131487561	3300010362	Tropical Forest Soil	AQFLDEVLDRQLTELSTEPVKDLLEARYKKFRVMGQFFDISQTL*
Ga0105239_103837253	3300010375	Corn Rhizosphere	DAVLDRQLMALSNQPTKELLDARYEKFRNMGQFFDLGA*
Ga0137392_101412591	3300011269	Vadose Zone Soil	HTDFEGAARFLDEVLDRQLVALTNQPVRDLVDARYEKFRKMGQFFDLWN*
Ga0137392_109545252	3300011269	Vadose Zone Soil	TVLDRQLVMLTNQSAKDLLDTRYEKFRKMGQFFHIVG*
Ga0137392_115402601	3300011269	Vadose Zone Soil	LDRQLVTLTNQPIRELLGARYEKFRKMGQFFDLGN*
Ga0137391_103020031	3300011270	Vadose Zone Soil	DHEAAARFHDEVLDRQMAALTNQPIRELLDARYEKFRKMGQFFDLGN*
Ga0137391_104387401	3300011270	Vadose Zone Soil	TDFEAAARFVDEVLDRQLVALTNQPIRELLDARYEKFRKMGQFFDLGN*
Ga0137393_100640171	3300011271	Vadose Zone Soil	QFLGEVLDRQLTELTTESVKDLVEARYKKFRQMGQFFDLQA*
Ga0137393_101688923	3300011271	Vadose Zone Soil	DEVLDRQLAALTSEPVKALVASRYDKFRKMGQYFDLQA*
Ga0137393_112681041	3300011271	Vadose Zone Soil	GAARFLDEVLDRQLAALTNQPVRELLKARYEKFRKLGQFFDLGH*
Ga0137364_106090641	3300012198	Vadose Zone Soil	EVLDRQLAALTNQPIRELLEARYEKFRKMGQFFDLGN*
Ga0137383_100921541	3300012199	Vadose Zone Soil	LDRQLVSLAHEPVRELLDARYEKFRKMGQFFDLGN*
Ga0137382_103759263	3300012200	Vadose Zone Soil	EAAAKLLDEVLDRQLVALTNQPVPELLDARYEKFRKMGQFFDLGN*
Ga0137363_106213322	3300012202	Vadose Zone Soil	DRQLTELMSEPVKHLVEARYKKFRQMGQFFDLQA*
Ga0137399_104082973	3300012203	Vadose Zone Soil	RFLEEVLERQLAALAVEPTKDLLAARYDKFRKMGQYFDMQT*
Ga0137399_105568801	3300012203	Vadose Zone Soil	TDHEGAARFLDEVLDRQLAALTNQPLRELLEVRYEKFRKMGQFFDLGN*
Ga0137399_115308311	3300012203	Vadose Zone Soil	RFLEEVLDRQLVALTNQPIRDLIDARYEKFRKMGQYFDLWN*
Ga0137378_100646295	3300012210	Vadose Zone Soil	DRQLVSLAHEPVRELLDARYEKFRKMGQFFDLGN*
Ga0137378_105849181	3300012210	Vadose Zone Soil	LDRQLVALTNQPVRELLDARYEKFRRMGQFFDLGK*
Ga0137371_102308093	3300012356	Vadose Zone Soil	AAAQYLDEVLDRQLTELSATPVKDLLESRYKKFREMGQFFDLQP*
Ga0137385_112751472	3300012359	Vadose Zone Soil	RFLDEVLDRQLVALTNQPVRELLDARYEKFRRMGQFFDLGN*
Ga0137361_109116102	3300012362	Vadose Zone Soil	ARFLDEVLDRQLVALTNQPVRELLDARYEKFRRMGQFFDLGN*
Ga0137390_101417415	3300012363	Vadose Zone Soil	EVLDRQLTELTTESVKDLVAARYKKFRQMGQFFDLQA*
Ga0137390_102117762	3300012363	Vadose Zone Soil	LDRQLVALTNQPIRELLDARYEKFRKMGQFFDLGN*
Ga0137390_103619211	3300012363	Vadose Zone Soil	EAAAQFLDEVLDRQLTELTTESVKDLVEARYKKFRQMGQFFDLQA*
Ga0137390_103763002	3300012363	Vadose Zone Soil	RFVDEVLDRQLVALTNQPIRELLDARYEKFRKMGQFFDLGN*
Ga0137390_113299362	3300012363	Vadose Zone Soil	DEVLDRQLVALTNQPIRELLDARYEKFRKMGQFFDLGN*
Ga0137358_100412261	3300012582	Vadose Zone Soil	EAAARFLDEVLDRQLVALTNQPVRDLVDARYEKFRKMGQFFDLWN*
Ga0137358_103225053	3300012582	Vadose Zone Soil	LDRQLVMLTNQPVKDLLDARYQKFRNMGQYFDIG*
Ga0137396_106794693	3300012918	Vadose Zone Soil	HVDHEAAARFLEEVLDRQLVALTNQPIRDLIDARYEKFRKMGQYFDLWN*
Ga0137394_101964734	3300012922	Vadose Zone Soil	LDRQLVALTNQPVRDLVDARYEKFRKMGQFFDLWN*
Ga0137394_102230252	3300012922	Vadose Zone Soil	DRQLVALTNQPVRDLVDARYEKFRKMGQFFDLWN*
Ga0137359_101497225	3300012923	Vadose Zone Soil	DRQLAELSATPVKDLVESRYKKFREMGQFFDLQP*
Ga0137359_107733253	3300012923	Vadose Zone Soil	DHEAAARFLDEVLDRQLVALTNQPVRDLVDARYEKFRKMGQFFDLWN*
Ga0137413_103487221	3300012924	Vadose Zone Soil	TDFEGAARFLDEVLDRQLVALTNQPLRELLDARYEKFRKMGQFFDLGN*
Ga0137416_117375961	3300012927	Vadose Zone Soil	HEGAARFLDEVLDRQLAALTNQPIRELLAARYEKFRKMGQFFDLSN*
Ga0137404_104755233	3300012929	Vadose Zone Soil	HEAAARLFDEVLDRQLMILLNQPIRDLLQARYEKFRNMAQYFDIGS*
Ga0137410_101428712	3300012944	Vadose Zone Soil	LDEVLDRQLVALTNQPVQELLDARYEKFRKMGQFFDLGN*
Ga0126375_108489582	3300012948	Tropical Forest Soil	DEVLDRQLVTLTNQPVKDLLDARYEKFRRMGQFFDLMNP*
Ga0153916_120882591	3300012964	Freshwater Wetlands	QFLDTVLERQLALLSGLGPADLVRKRYEKFRKMGQFFDLHG*
Ga0163162_116266852	3300013306	Switchgrass Rhizosphere	FLEEVLDRQLIELLNEPVTALVSARYNKFRKMGQFFDLQA*
Ga0181537_109010002	3300014201	Bog	AFLDDVLNRQLMALSNQPLRALLDARYEKFRKMGQFFDFVR*
Ga0137420_10902411	3300015054	Vadose Zone Soil	FLDEVLDRQLAALTNQPIRELLDARYEKFRKMGQFFDLGN*
Ga0137420_13270562	3300015054	Vadose Zone Soil	DEVLDRQLAALTNQPIRELLDARYEKFRKMGQFFDLGN*
Ga0137418_104297251	3300015241	Vadose Zone Soil	TDFEGAARFLDEVLDRQLVALTNQPPRELLDARYEKFRKMGQFFDLGN*
Ga0137409_100488866	3300015245	Vadose Zone Soil	HEAAARFLEEVLDRQLVALTNQPVLDLVDARYEKFRKMGQFFDLWN*
Ga0137409_110139571	3300015245	Vadose Zone Soil	VVLDRQLAELSATPVKDLVESRYKKFREMGQFFDLQP*
Ga0182036_109841992	3300016270	Soil	RLLDDVLDRQLVALTNEPVRELLSARYEKFRKMGQFFDLPNG
Ga0182033_115432951	3300016319	Soil	EAAARLLEEVLDRQLVELLNEPIARLVSARYEKFRKMGQFFDLQS
Ga0182034_104882903	3300016371	Soil	AAARFLEEVLDKQLIELLNEPVDSLLSARYNKFRTMGQFFDLQS
Ga0182034_105609841	3300016371	Soil	TDPEAAARLLEEVLDRQLVQLLNEPTAALISARYEKFRKMGQFFDLQS
Ga0187847_102212633	3300017948	Peatland	AAGYVDEVLNRQLIALSHQPLKAVLDGRYEKFRKMGQFFDLVPR
Ga0187816_102213772	3300017995	Freshwater Sediment	LDEVLYRQLVELTNQPIRELLHARYEKFRKMGQFFDLGG
Ga0187770_102701963	3300018090	Tropical Peatland	RLLDEVLDRQLVALANQPVRELLNARYEKFRKMGQFFDLGA
Ga0173479_107632681	3300019362	Soil	RLLEEVLDRQLVELLNEPVKGLLSARYDKFRKMGQFFDLQS
Ga0137408_14144031	3300019789	Vadose Zone Soil	YLDEVLDRQLVSLTNQPLPELLEARYEKFRKMGQFFDLGG
Ga0179594_102821701	3300020170	Vadose Zone Soil	EEVLDRQLVALTNQPVRDLVDARYEKFRKMGQFFDLWN
Ga0179592_104765002	3300020199	Vadose Zone Soil	EASARLLDIVLDRQLVALTNESTKDLLDARYEKFRKMGQFFDLGS
Ga0210407_100226726	3300020579	Soil	EVLDRQLVALSQQPTKDLLETRYDKFRKMGQFFDFGS
Ga0210407_101495783	3300020579	Soil	AARFLDEVLDRQLAALTNQPIRELLDARYEKFRKMGQFFDLGN
Ga0210407_113125081	3300020579	Soil	DEVLDRQLTALTNQPIRELLAARYEKFRKMGQFFDLGN
Ga0210401_100901806	3300020583	Soil	LDRELVALTQQPTKDLLEARYEKFRKMGQFFDFGN
Ga0210404_106058431	3300021088	Soil	AQLLGEVLDRELLALTQQPTKDLLEARYEKFRKMGQFFDFGN
Ga0210406_100522831	3300021168	Soil	VLDRQLVALTNQPVRTLVDARYEKFRRMGQFFDLGN
Ga0210400_100701391	3300021170	Soil	LDIVLDRQLVALTNESTKDLLEARYEKFRKMGQFFDLGS
Ga0210400_105354812	3300021170	Soil	ARFLDEVLDRQLAALTNQPIRELLQARYEKFRKMGQFFDLGN
Ga0210408_107986961	3300021178	Soil	DHEAAARLLDEVLDRQLMVLQNQPVHDLVKARYEKFRNMAQYFDIGS
Ga0210396_107959462	3300021180	Soil	LLGEVLDRQLVALTQQSSKDLLNARYEKFRKMGQFFDFGN
Ga0210396_108770131	3300021180	Soil	LGEVLDRQLVALTQQPTKDLLDTRYEKFRKMGQFFDFGS
Ga0210384_106646972	3300021432	Soil	LDRELVALTQQPTKDLLDARYEKFRKMGQFFDFGD
Ga0210391_107434701	3300021433	Soil	AARFLEEVLERQLAALSSESAKSLLASRYEKFRKMGQFFDLQA
Ga0210392_107599792	3300021475	Soil	GQLLGEVLDRQLVALSQQPTKDLLDTRYEKFRKMGQFFDFGS
Ga0210398_101915575	3300021477	Soil	EVLDRQLVALANETTKDLLDARYEKFRKMGQFFDLGS
Ga0210402_115672072	3300021478	Soil	YEAAARSLDVVLDRQLLALSNQATKEMLDARYKKFRNMGQFFDLGA
Ga0210409_102805731	3300021559	Soil	DEVLDRQLAALTNQPIRELLDARYEKFRKMGQFFDLGN
Ga0210409_111589682	3300021559	Soil	DEVLDRQLTVLLNQPIRELLQARYEKFRNMAQYFDIGS
Ga0126371_101240831	3300021560	Tropical Forest Soil	ARLLDEVLDRQLTALSNESPRDLLSARYEKFRKMGQFFDLVGG
Ga0224549_10570431	3300022840	Soil	YLDEVLNRQLTTLSQQPMKNLLDERYEKFRKMGQYFDVVSR
Ga0247669_10736581	3300024182	Soil	LDRQLMALMNQSTKQLLDARYEKFRNMGQFFDLGA
Ga0224572_10717852	3300024225	Rhizosphere	EGAGQLLGEVLDRQLVALSQQPTKDLLDARYEKFRKMGQFFDFGS
Ga0207711_101949084	3300025941	Switchgrass Rhizosphere	DYEAAGRSLDAVLDRQLMALSNQPTKELLDARYEKFRNMGQFFDLGA
Ga0209863_100719991	3300026281	Prmafrost Soil	DNVLDRQLVALTNESTKDLLDARYEKFRKMGQFFDLGS
Ga0209238_10074326	3300026301	Grasslands Soil	EAAARFLDEALDRQLVSLAHESVRELLDARYEKFRKMGQFFDLGN
Ga0209265_10018761	3300026308	Soil	LDRQLVALTNEPVRELLAARYEKFRKMGQFFDLSNG
Ga0209055_10123421	3300026309	Soil	HEAAARLLDEVLDRQLVALTNQPVPELLDARYEKFRKMGQFFDSGN
Ga0209268_10153861	3300026314	Soil	LDRQLVALTNQPVPELLDARYDKFRKMGQFFDLGN
Ga0209804_12504302	3300026335	Soil	DEVLDRQLVALTNQPVPELLDARYEKFRKMGQFFDLGN
Ga0179587_101151631	3300026557	Vadose Zone Soil	FDEVLDRQLMILLNQPIRDLLQARYEKFRNMAQYFDIGS
Ga0209529_10574411	3300027334	Forest Soil	PEEAAKLLDEVLDRQLMALSNESTKSLLDARYQKFRKMGQFFDLGN
Ga0209524_10949042	3300027521	Forest Soil	FLDIVLDRQLVMLTNQSTKDLLDARYEKFRKMGQFFTS
Ga0209219_10642551	3300027565	Forest Soil	EGAGRLLDAVLDRQLLMLSQQPQKELLEARYEKFRKMGQFFDLGS
Ga0209076_10420903	3300027643	Vadose Zone Soil	VLDRQLAALTNQPIRELLQARYQKFRKMGQFFDLGN
Ga0209217_10985621	3300027651	Forest Soil	TVLDRQLVALTNQSVRDLLDARYEKFRRMGQYFENVS
Ga0209588_11477502	3300027671	Vadose Zone Soil	AAARFLDEVLDRQLVALTNQPVRDLVDARYEKFRKMGQFFDLWN
Ga0209588_11781311	3300027671	Vadose Zone Soil	FLDEVLDRQLVALTNQPPRELLDARYEKFRKMGQFFDLGN
Ga0209446_10279361	3300027698	Bog Forest Soil	QSLGEVLDRQLVALTNQSTNEVLANRYEKFRKMGQFFDFVN
Ga0209328_101737942	3300027727	Forest Soil	QLLDEVLDRQLVALLNQSPRDLLAMRHDKFRLMGQFFEMK
Ga0209655_100932992	3300027767	Bog Forest Soil	ARNVDEILNRQLIALSHQPLKDLLDGRYEKFRKMGQYFDFVAR
Ga0209448_102620622	3300027783	Bog Forest Soil	FDAAAGLLDEVLDRQLTALSNQPLKEVLDSRYDKFRKMGQFFDFVAR
Ga0209074_104518002	3300027787	Agricultural Soil	ILDDVLERQLVTLVNQPIRDLVNTRYEKFRKMGQFFDIAG
Ga0209139_1000148213	3300027795	Bog Forest Soil	GEVLDRQLVALTNQSTNEVLANRYEKFRKMGQFFDFVN
Ga0209180_106324832	3300027846	Vadose Zone Soil	LDRQLVMLTNQSAADLLAARYEKFRKMGQFFDHVS
Ga0209180_107112081	3300027846	Vadose Zone Soil	EGAARFLDEVLDRQLAALTNQPIRELLAARYEKFRKMGQFFDLGN
Ga0209526_1000190418	3300028047	Forest Soil	YEAAARFLDEVLDRELVVLTNQSTKGLLEARYEKFRNMGQFFDLGS
Ga0209526_109961732	3300028047	Forest Soil	LDTVLERQLLMLSQQPQKELLEARYEKFRKMGQFFDLGS
Ga0265338_111825232	3300028800	Rhizosphere	DAAAGFLDEVLSRQLAALSHQPLKALLDGRYEKFRKMGQYFDFVNR
Ga0308309_105678611	3300028906	Soil	AAKLLDEVLDRQLMALSNESTKDLLNARYEKFRKMGQFFDLGN
Ga0302304_100440141	3300029993	Palsa	ILNRQLTALSQQPMKDLLDGRYEKFRKMGQYFDVVSR
Ga0265753_11298492	3300030862	Soil	VIDRQLTVLTNESTKDLVNARYEKFRKMGQFFDLGS
Ga0170834_1039720053	3300031057	Forest Soil	RLLDAVIDRQLAVLTNESTKDLVDARYEKFRKMGQFFDLGS
Ga0170834_1087432713	3300031057	Forest Soil	GAAQFLDEVLDRQLTELMTEPVKHLVEARYKKFRQMGQFFDLQA
Ga0170834_1107826822	3300031057	Forest Soil	FLDEVLDRQLTELTTESVRDLVEARYKKFRQMGQFFDLQA
Ga0307475_106872681	3300031754	Hardwood Forest Soil	EGAARLLEEVLDRQLVELLNEPAKSLVAARYDKFRKMGQFFDLQA
Ga0307475_115841941	3300031754	Hardwood Forest Soil	FLDEVLDRQLVALTNQSTKELLAARYEKFRNMGQFFDIGS
Ga0307478_102678823	3300031823	Hardwood Forest Soil	DDVLDRQLVTLTNQPIRELVQARYEKFRKMGQFFDLGN
Ga0307478_108335351	3300031823	Hardwood Forest Soil	EEAAKLLDEVLDRQLMALSNESTKDLLNARYEKFRKMGQFFDLGN
Ga0307479_110473712	3300031962	Hardwood Forest Soil	LLDDVLDRQLVALTNEPVRELLAARYEKFRKMGQFFDLPNG
Ga0307471_1006654741	3300032180	Hardwood Forest Soil	AAQFLDEVLDRQLVELTSEPIKALVDARYKKFRQMGQFFDILA
Ga0307471_1012054242	3300032180	Hardwood Forest Soil	VLDRQLVELMNQPVRELLDARYAKFRKMGQFFDLGN
Ga0348332_115630331	3300032515	Plant Litter	LGEVLDRELLALTQQPTKDLLEARYEKFRKMGQFFDFGN
Ga0335078_113976651	3300032805	Soil	AARLLGDVLERQLLALTSVATKELLKDRYEKFRKMGQFFDLIR
Ga0335083_109828342	3300032954	Soil	GAARLLGDVLERQLLALTSVATKELLKDRYEKFRKMGQFFDLIR
Ga0316212_10474732	3300033547	Roots	FDPEGAGRLLGEVLDRQLVALTQQPTKDLLDTRYDKFRKMGQFFDFGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033166

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences