Metagenome / Metatranscriptome Family F033893

Basic Information
Family ID	F033893
Family Type	Metagenome / Metatranscriptome
Number of Sequences	176
Average Sequence Length	53 residues
Representative Sequence	MFLLRDLVSPRTWLAMISHLAGLFLGLAVMVVVVTGLSLGFSLLVLAL
Number of Associated Samples	143
Number of Associated Scaffolds	176

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.84 %
% of genes near scaffold ends (potentially truncated)	99.43 %
% of genes from short scaffolds (< 2000 bps)	93.18 %
Associated GOLD sequencing projects	135
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (83.523 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.386 % of family members)
Environment Ontology (ENVO)	Unclassified (36.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.227 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86. 1FACEORA_5078420 2JGI12269J14319_100300723 3JGI12635J15846_109035451 4Ga0052254_10007782 5JGIcombinedJ51221_102620932 6Ga0008092_112314942 7Ga0062388_1008926761 8Ga0062388_1016842831 9Ga0062594_1010075681 10Ga0066815_100198252 11Ga0070709_114181112 12Ga0070713_1005606002 13Ga0070713_1006322892 14Ga0070710_104117881 15Ga0070711_1004071032 16Ga0070678_1006770201 17Ga0070681_119456431 18Ga0066702_105640571 19Ga0068859_1001126642 20Ga0075029_1008941851 21Ga0075017_1005241921 22Ga0070712_1014032061 23Ga0070765_1006748801 24Ga0074054_121004942 25Ga0066659_118719952 26Ga0079220_110651371 27Ga0075434_1012636091 28Ga0075426_103538992 29Ga0066710_1019701732 30Ga0066710_1040545901 31Ga0099827_106083041 32Ga0099827_118601272 33Ga0105247_103391672 34Ga0066709_1033702552 35Ga0105243_112548181 36Ga0116214_12786121 37Ga0116214_13576602 38Ga0116218_11408001 39Ga0105238_120284091 40Ga0126374_114577582 41Ga0116219_106960671 42Ga0126370_123216652 43Ga0136449_1012787012 44Ga0136449_1043381422 45Ga0126347_12678581 46Ga0126359_17303201 47Ga0137365_113153041 48Ga0137362_115985771 49Ga0137381_111128212 50Ga0137378_107065881 51Ga0137377_113106012 52Ga0137370_104662252 53Ga0137370_108588151 54Ga0137387_107918601 55Ga0137390_101122971 56Ga0157353_10125331 57Ga0157339_10278692 58Ga0157288_103259451 59Ga0137410_101085431 60Ga0164298_104067091 61Ga0164303_108576941 62Ga0164307_117704491 63Ga0182005_11247192 64Ga0132256_1006870302 65Ga0132255_1006533221 66Ga0182036_108769081 67Ga0182033_104301761 68Ga0182035_118980041 69Ga0182034_107979421 70Ga0182034_113803382 71Ga0187809_101536191 72Ga0187775_102678392 73Ga0187808_102552932 74Ga0187808_104095071 75Ga0187776_113864162 76Ga0187783_112325132 77Ga0187815_102583161 78Ga0173479_108777072 79Ga0210399_112394802 80Ga0210408_105820582 81Ga0213874_103841451 82Ga0210397_100125254 83Ga0210389_104642671 84Ga0210383_117518451 85Ga0210398_116057461 86Ga0210409_116691532 87Ga0247670_10491762 88Ga0179589_101852292 89Ga0208714_10555902 90Ga0207692_109409272 91Ga0207695_106746322 92Ga0207695_111891531 93Ga0207671_102643522 94Ga0207693_114354081 95Ga0207663_100527572 96Ga0207700_115405211 97Ga0207664_105680161 98Ga0207664_109289972 99Ga0207665_103752091 100Ga0207661_113063441 101Ga0207678_101027981 102Ga0209159_12382221 103Ga0209074_101049972 104Ga0268266_107262361 105Ga0268266_115839022 106Ga0307304_100326782 107Ga0302178_104851482 108Ga0318516_106519862 109Ga0318528_104062981 110Ga0318528_107038582 111Ga0318573_107330042 112Ga0318515_103181632 113Ga0318574_105049241 114Ga0318572_101681372 115Ga0318496_100959442 116Ga0318496_102220802 117Ga0306917_114162371 118Ga0318501_102729622 119Ga0318501_103102512 120Ga0318501_104868421 121Ga0306918_103646102 122Ga0306918_107634621 123Ga0318502_106711212 124Ga0318492_100303462 125Ga0318554_102994162 126Ga0318509_104596981 127Ga0318546_103553551 128Ga0318543_102498312 129Ga0318566_105594472 130Ga0318547_110864692 131Ga0318552_102306392 132Ga0318552_102642463 133Ga0318552_104846462 134Ga0318550_102824961 135Ga0318565_100695941 136Ga0318565_103511722 137Ga0318568_108686122 138Ga0318511_102185022 139Ga0318512_102852132 140Ga0318512_106104101 141Ga0318495_100991271 142Ga0306925_118590691 143Ga0318520_102152121 144Ga0318520_106904552 145Ga0306921_100843774 146Ga0308174_119006961 147Ga0310909_101849201 148Ga0310909_104553091 149Ga0310909_116750691 150Ga0306926_112610711 151Ga0306926_116162491 152Ga0318562_103957682 153Ga0318562_105112712 154Ga0318562_105485452 155Ga0318562_106520642 156Ga0318563_103721612 157Ga0318569_103721922 158Ga0318524_104282782 159Ga0318524_105562512 160Ga0318553_103547791 161Ga0318553_107709211 162Ga0306924_100780571 163Ga0318525_103707242 164Ga0307472_1005771112 165Ga0306920_1012052022 166Ga0306920_1032179632 167Ga0335085_102136181 168Ga0335085_113537732 169Ga0335079_100720663 170Ga0335080_123514011 171Ga0335069_102995941 172Ga0335069_107404041 173Ga0335083_106857992 174Ga0310914_117792372 175Ga0318519_103497282 176Ga0316214_10452781
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86. 1FACEORA_5078420 2JGI12269J14319_100300723 3JGI12635J15846_109035451 4Ga0052254_10007782 5Ga0062388_1008926761 6Ga0062388_1016842831 7Ga0070709_114181112 8Ga0070710_104117881 9Ga0137378_107065881 10Ga0182034_113803382 11Ga0187808_104095071 12Ga0210408_105820582 13Ga0213874_103841451 14Ga0210398_116057461 15Ga0302178_104851482 16Ga0318528_104062981 17Ga0318515_103181632 18Ga0318574_105049241
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48 1Ga0066815_100198252 2FACEORA_5078420 3Ga0052254_10007782 4Ga0062388_1016842831 5Ga0066702_105640571 6Ga0074054_121004942 7Ga0116218_11408001 8Ga0126359_17303201 9Ga0137378_107065881 10Ga0137390_101122971 11Ga0157353_10125331 12Ga0157339_10278692 13Ga0182035_118980041 14Ga0182034_113803382 15Ga0187775_102678392 16Ga0187808_102552932 17Ga0187808_104095071 18Ga0187783_112325132 19Ga0210408_105820582 20Ga0213874_103841451 21Ga0210389_104642671 22Ga0210398_116057461 23Ga0208714_10555902 24Ga0207692_109409272 25Ga0207693_114354081 26Ga0207664_109289972 27Ga0302178_104851482 28Ga0318573_107330042 29Ga0318574_105049241 30Ga0318496_102220802 31Ga0318563_103721612 32Ga0318569_103721922 33Ga0306920_1032179632 34Ga0335069_107404041 35Ga0316214_10452781
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.89% β-sheet: 0.00% Coil/Unstructured: 42.11%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Pfam ID	Name	% Frequency in 176 Family Scaffolds
PF03176	MMPL	28.41
PF13796	Sensor	1.70
PF12852	Cupin_6	1.14
PF00398	RrnaAD	0.57

COG ID	Name	Functional Category	% Frequency in 176 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	28.41
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	28.41
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	0.57

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.52 %
Unclassified	root	N/A	16.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.52 %
Unclassified	root	N/A	16.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.52 %
Unclassified	root	N/A	16.48 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	79.55 %
Unclassified	root	N/A	16.48 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	79.55 %
Unclassified	root	N/A	16.48 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	77.84 %
Unclassified	root	N/A	16.48 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.57 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	4.55 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.57 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.11 %
Unclassified	root	N/A	16.48 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.57 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	4.55 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.57 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.41 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.14 %
Unclassified	root	N/A	16.48 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.57 %
Bailinhaonella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Bailinhaonella	3.41 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	4.55 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.57 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.14 %
Unclassified	root	N/A	16.48 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.57 %
Bailinhaonella thermotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Bailinhaonella → Bailinhaonella thermotolerans	3.41 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	0.57 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.14 %
Unclassified	root	N/A	16.48 %
unclassified Catenulispora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora	4.55 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.57 %
Bailinhaonella thermotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Bailinhaonella → Bailinhaonella thermotolerans	3.41 %
Catenulispora sp. 13_1_20CM_3_70_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	4.55 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	0.57 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.14 %
Unclassified	root	N/A	16.48 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01EUH38	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Bailinhaonella → Bailinhaonella thermotolerans	519	Open in IMG/M
3300001356\|JGI12269J14319_10030072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3631	Open in IMG/M
3300001593\|JGI12635J15846_10903545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	504	Open in IMG/M
3300003152\|Ga0052254_1000778	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300003505\|JGIcombinedJ51221_10262093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300004629\|Ga0008092_11231494	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300004635\|Ga0062388_100892676	Not Available	853	Open in IMG/M
3300004635\|Ga0062388_101684283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	647	Open in IMG/M
3300005093\|Ga0062594_101007568	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005164\|Ga0066815_10019825	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M

Showing 1 to 10 of 176 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.20%
Host-Associated	Host-Associated	10.80%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	5.11%
Plants	Host-Associated → Plants	10.80%
Terrestrial	Environmental → Terrestrial	84.09%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	3.98%
Peat	Environmental → Terrestrial → Peat	0.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.39%
Roots	Host-Associated → Plants → Roots	1.14%
Sediment	Environmental → Aquatic → Sediment	1.14%
Soil	Environmental → Terrestrial → Soil	83.52%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.14%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.57%
Loam	Environmental → Terrestrial → Soil → Loam	10.23%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.27%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.14%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.41%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.41%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.57%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.27%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.57%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.14%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.14%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.57%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.14%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.27%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.14%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.98%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.57%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.57%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.14%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.70%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.57%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.14%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 143 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_5078420	2032320005	Soil	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLGFGFSLVVIALVG
JGI12269J14319_100300723	3300001356	Peatlands Soil	MFLVRDLVSPRTWLAMIHHLAGLFIGLVVVVVITVGLSLGFSLLVV
JGI12635J15846_109035451	3300001593	Forest Soil	MFLIRDLVSPRTWLAMXHHLAGLXIGSAVIFVVMAGLGFGIGLLPIALIGLPILGLTMRL
Ga0052254_10007782	3300003152	Sediment	MFLVRDLVSPRTWLAMTSHLAGLFTGLLVIVVIVTGLSLGFSLLVLALVGLPLLGLTLRLAGW
JGIcombinedJ51221_102620932	3300003505	Forest Soil	MFLLRDLVSPRTWLAMTSHLAGLVIGFAVIFVITFGLGFGFGLVVIALVGLPVLG
Ga0008092_112314942	3300004629	Tropical Rainforest Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAVMVVLITGLSLGFSLLVLALV
Ga0062388_1008926761	3300004635	Bog Forest Soil	MFLLRDLVSPRTWLAMTSHLAGLFTGLLVMVVVVTGLSLGF
Ga0062388_1016842831	3300004635	Bog Forest Soil	MFLLRDLVSPRTWLALIHHWTGLFMGIAAIVVITTGLSLGASLLVIALIGLPILGVMVRAAD
Ga0062594_1010075681	3300005093	Soil	MFLLRDLVSPRTWLAMISHLAGLFLGIAIMVVVVTGLSLGFSLLVL
Ga0066815_100198252	3300005164	Soil	MFLLRDLVSPRTWLAMISHLAGLFLGLAVMVVVVTGLSLGFSLLVLAL
Ga0070709_114181112	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGLGVMVVFVTGLSLGFSLLVLALVGLPI
Ga0070713_1005606002	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MFLVRDLVSPRTWLAMTSHLAGLVIGFAVIFVFTFGLGFGFSLVVIALVGLPVL
Ga0070713_1006322892	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MFLVRDLVSPRTWLAMTSHLAGLVIGFAVIFVFTFGLGFGFSLVVIALVGLPVLGVTL
Ga0070710_104117881	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLGFGFSLVVIALVGLPVLGVTLRFAEWFATAERARL
Ga0070711_1004071032	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MFLVRDLVSPRTWLAMTSHLAGLVIGFAVIFVFTFGLGFGFSLVVIALVGLP
Ga0070678_1006770201	3300005456	Miscanthus Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGIAIMVVVVTGLSLGFSLLVLALTGL
Ga0070681_119456431	3300005458	Corn Rhizosphere	MFLVRDLVSPRTWLAMTSHLAGLILGIAAFVMVVTGLSLGFSLLVLALVGLPLLGLTLRL
Ga0066702_105640571	3300005575	Soil	MFLVRDLVSPRTWLAMTSHLAGFVMGLAVFVVVVTGLSLGFSLLVLALVGLPLL
Ga0068859_1001126642	3300005617	Switchgrass Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGIAIMVVVVTGLSLGFSLLVLALTGLPILGLTLRAATWC
Ga0075029_1008941851	3300006052	Watersheds	MFLLRDLVSPRTWLAMTSHLAGLFTGIAVVVVYTVGLSVGASLLV
Ga0075017_1005241921	3300006059	Watersheds	MFLLRDLVSPRTWLAMTSHLAGLFTGIVAVVVYTVGLSVGGS
Ga0070712_1014032061	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLGFGFSLVVIALVGLPVLGV
Ga0070765_1006748801	3300006176	Soil	MFLLRDLASPRTWLAMISHLAGLFLGLGVMVVFVTGLSLGFSLLVLALTGLPILGLTLRAAT
Ga0074054_121004942	3300006579	Soil	MFLVRDLVSPRTWLAMVSHLAGLVVGLAVIVFVVTGLSLGFSLLVLAL
Ga0066659_118719952	3300006797	Soil	MFLLRDLVSPRTWLAMISHLVGLFLGIAVMVVVVTGLSLGFSLLVLALTGLPILGLTLRA
Ga0079220_110651371	3300006806	Agricultural Soil	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLAFGFSLVVLALVGLPVLGVTLRFAEWFATA
Ga0075434_1012636091	3300006871	Populus Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGIAILVVVVTGLSLGFSLLVLALTGLPILGL
Ga0075426_103538992	3300006903	Populus Rhizosphere	MFLVRDLVSPRTWLAMISHLAGLFLGIAVMVVVVTGLSLGFSLLVLALTGLPILGLTLRA
Ga0066710_1019701732	3300009012	Grasslands Soil	MFLLRDLVAPRTWLAMISHLAGLFLGLAVMVVVVTGLSLGFSLL
Ga0066710_1040545901	3300009012	Grasslands Soil	MFLLRDLVSPRTWLAMTSHLAGLFLGLAVIVVFVTGLSLGFSLLV
Ga0099827_106083041	3300009090	Vadose Zone Soil	MFLVRDLVSPRTWLAMIHHLAGLFIGLAAIVVFTVGLSLGFSLLVVALVGLPLLGVTLR
Ga0099827_118601272	3300009090	Vadose Zone Soil	MFLLRDLVSPRTWLAMTSHLAGLFLGLAVIVVFVTGLSLG
Ga0105247_103391672	3300009101	Switchgrass Rhizosphere	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLAFGFSLVVLALVGLPVLGVTLRFAEWFATAERARFG
Ga0066709_1033702552	3300009137	Grasslands Soil	MFLLRDLVSPRTWLAMISHLAGLFLGIAVMVVVVTGLSLGFSLLVLALTGLPILGLTLRA
Ga0105243_112548181	3300009148	Miscanthus Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGIAIMVVVVTGLSLGFSLLVLALTGLPIL
Ga0116214_12786121	3300009520	Peatlands Soil	MFLLRDLVSPRTWLAMTSHLAGLFTGIVAVVVYTVGLSVG
Ga0116214_13576602	3300009520	Peatlands Soil	MFLVRDLVSPRTWLAMTHHLAGLFIGLVAVVVITVGLSVGFSLLVVALVGLPILGVTLR
Ga0116218_11408001	3300009522	Peatlands Soil	MFLLRDLVSPRTWLAMTSHLAGLFIGFAVIFVFAFGLGFGFSLVVVALIGLPVLGLTLRFADW
Ga0105238_120284091	3300009551	Corn Rhizosphere	MFLVRDLVSPRTWLAMISHLAGLFLGLAVMVVVVTGLSLGFSLLVLAL
Ga0126374_114577582	3300009792	Tropical Forest Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAVMVVLVTGLSLGFSL
Ga0116219_106960671	3300009824	Peatlands Soil	MFLLRDLVSPRTWLAMTSHLAGLFTGLLVMVVVVTGLSLGFSL
Ga0126370_123216652	3300010358	Tropical Forest Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAVMVVLVTGLSLGFSLLVLALTGLPI
Ga0136449_1012787012	3300010379	Peatlands Soil	MFLVRDLVSPRTWLAMTSHLAGLFTGLLVMVVVVTGLSLGFSLVVLALAGLPLLGLTLRFADWFAV
Ga0136449_1043381422	3300010379	Peatlands Soil	MFLVRDLVSPRTWLAMTSHLAGLFTGLLVMVVVVTGLSLGFSLVVLALAGL
Ga0126347_12678581	3300010867	Boreal Forest Soil	MFLVRDLVSPRTWLAMTSHLAGFVMGLAVFVVIVTGLSLGFSLLV
Ga0126359_17303201	3300010869	Boreal Forest Soil	MFLLRDLVSPRTWLALIHHLAGLFVGLAAVVVITTGLSLGFGLVVVALVG
Ga0137365_113153041	3300012201	Vadose Zone Soil	MFLLRDLVSPRTWLAMTSHLAGLFLGLAVMVVFVTGLSLGFSLLVLALTGLPI
Ga0137362_115985771	3300012205	Vadose Zone Soil	MFLVRDLVSPRTWLAMTSHLAGLFLGLAVIVVFVTGLSLGFSLLVLALVGLPILGLTLRAATLY
Ga0137381_111128212	3300012207	Vadose Zone Soil	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLGFGFSLVVIALVGLP
Ga0137378_107065881	3300012210	Vadose Zone Soil	MFLLRDLVSPRTWLAMIHHLAGLFIGLAAVVVFIVGLSVGFGLLVVALAGLPLLGVTLRLADWFA
Ga0137377_113106012	3300012211	Vadose Zone Soil	MFLVRDLVSPRTWLAMISHLVGLFMGLAVMVVFITGLSLGFSLLVLALAGLPILGL
Ga0137370_104662252	3300012285	Vadose Zone Soil	MFLLRDLVSPRTWLAMTSHLAGLFLGLAVIVVFVTGLSLGFSLLVLALTGLPILGLTLRAATLYA
Ga0137370_108588151	3300012285	Vadose Zone Soil	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLGFGFSLVVIALVGLPVL
Ga0137387_107918601	3300012349	Vadose Zone Soil	MFLVRDLVSPRTWLAMIHHLAGLFIGLASIVVFTVDLSLG
Ga0137390_101122971	3300012363	Vadose Zone Soil	MFLVRDLVSPRTWLAMTSHLAGLFLGLAVMLFFVIGLSLGFSLL
Ga0157353_10125331	3300012496	Unplanted Soil	MFLLRDLVSPRTWLAMTSHLAGFVLGLAFFVVIVTGLSLGYSLLVLALVGL
Ga0157339_10278692	3300012505	Arabidopsis Rhizosphere	MFLVRDLVSPRTWLAMISHLAGLILGLAFFVVIVTGLSLGFSLLVLA
Ga0157288_103259451	3300012901	Soil	MFLLRDLVSPRTWLAMISHLAGLFLGIAILVVVVTGLSLGFSLLVLALTG
Ga0137410_101085431	3300012944	Vadose Zone Soil	MFLVRDLVSPRTWLAMTSHLAGLFLGLAVIVIFVTGLSLGFSLLVLALIG
Ga0164298_104067091	3300012955	Soil	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLGFGFSLVV
Ga0164303_108576941	3300012957	Soil	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLGFGFSLVVIALVGLPVLGVTLRFAE
Ga0164307_117704491	3300012987	Soil	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLGFGFSLVVIALVGLPVLGVTL
Ga0182005_11247192	3300015265	Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGIAVMVVVVTGLSLGFSLLVLALTGLPILGLTLR
Ga0132256_1006870302	3300015372	Arabidopsis Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGIAIMVVVVTGLSLGFSLLVLALTGLPILGLTLRA
Ga0132255_1006533221	3300015374	Arabidopsis Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGIAIMVVVVTGLSLGFSLLVLAL
Ga0182036_108769081	3300016270	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVVITGLSLGFSLLVLALVGLPILGLTLRAATLYA
Ga0182033_104301761	3300016319	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVVITGLSLGFSLLVLALVGLPILGLTLRAATLYAT
Ga0182035_118980041	3300016341	Soil	MFLVRDLVSPRTWLALISHLAGFVLGIAALVVIVTGLGLGYSLLVLALVGLPL
Ga0182034_107979421	3300016371	Soil	MFLVRDLVSPRTWLAMTSHLTGLFLGLAVIVVLVTGLSLGFSLLVLALVGLPILGL
Ga0182034_113803382	3300016371	Soil	MFLLRDLVSARTWLAMTQHLAGLFIGLVVFAILTVGLSTGVSLLVLALVGLPLLGV
Ga0187809_101536191	3300017937	Freshwater Sediment	MFLLRDLVSPRTWLAMVSHLAGLFMGLAVLVVFVTGLSLGFSLLVLALVGLPI
Ga0187775_102678392	3300017939	Tropical Peatland	MFLARDLVSPRTWLAMTNHLAGLFTGLAVMVVVVTGLSLGFSLVVLALVGLPLLGLTLRFADWFA
Ga0187808_102552932	3300017942	Freshwater Sediment	MFLVRDLVSARTWLAMTQHLAGLFIGLLVFFIITTGLSLGFSLL
Ga0187808_104095071	3300017942	Freshwater Sediment	MFPLRDLVSPRTWLAMTSHLAGLFTGIVAVVVYTVGLSVGGSLLVVALVGLPVL
Ga0187776_113864162	3300017966	Tropical Peatland	MFLLRDLVAPRTWLAMISHLAGLFMGLAVMVVVVTGLSLGVSLLVLALTGLPILGLTLRAAALY
Ga0187783_112325132	3300017970	Tropical Peatland	MFLLRDLVSPRTWLAMTSHLAGLFTGLAVLLVITIGLSLGFSLLVVALLGLPILGV
Ga0187815_102583161	3300018001	Freshwater Sediment	MFLVRDLVSPRTWLAMIHHLAGLFIGIAAVVVFTVGLSLGFSLLVVALVGLPILGVTLRLADWFAHAE
Ga0173479_108777072	3300019362	Soil	MFLLRDLVSPRTWLAMISHLAGLFAGIAVMVVVVTGLSLGFSLLVLALTGLPILGLTLRAATLY
Ga0210399_112394802	3300020581	Soil	MFLLRDLVSPRTWLAMTSHLAGLVIGFAVIFVITFGLGFGFSLVVIALVG
Ga0210408_105820582	3300021178	Soil	MFLLRDLVSPRTWLAMIHHLAGLFIGIAALTVVAVGLSVGF
Ga0213874_103841451	3300021377	Plant Roots	MFVVRDLVSSRTWLAMTNHLAGLVIGLAVFTVFVVGYSLGFSLLVLALVGL
Ga0210397_100125254	3300021403	Soil	MFLVRDLVSPRTWLAMTSHLAGLVIGFAVIFVFTFGLGFGFSLVVIALVGLPVLGVT
Ga0210389_104642671	3300021404	Soil	MFLVRDLVSPRTWLAMTSHLAGFFIGLAVIVVFITGLSLGFSLLVLALVGLPILGLTL
Ga0210383_117518451	3300021407	Soil	MFLLRDLVSPRTWLAMTSHLAGLFTGLLVFTFIVTGLSLGFSLL
Ga0210398_116057461	3300021477	Soil	MFLIRDLVSPRTWLAMTSHMAGLIIGIAIFTIFVTGLSVGFSLLVVALV
Ga0210409_116691532	3300021559	Soil	MFLVRDLVSPRTWLAMISHLAGLFMGLAVMVVIITGLSLGFSLLVLALVGLPILGLTLRAATLYAA
Ga0247670_10491762	3300024283	Soil	MFLLRDLVSPRTWLAMISHLAGLFLGIAIMVVVVTGLSLGFSLLVLALTGLPILGLT
Ga0179589_101852292	3300024288	Vadose Zone Soil	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLSFGFGLV
Ga0208714_10555902	3300025527	Arctic Peat Soil	MFLVRDLVSPRTWLAMIHHLAGLFIGLVAIVVFTVGLSLGFSLLVVALVGLPVLGVTLRLADWFAYAERA
Ga0207692_109409272	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MFLVRDLVSPRTWLAMTSHLAGLILGIAAFVMVVTGLSLGFSLLVLALVGLP
Ga0207695_106746322	3300025913	Corn Rhizosphere	MFLVRDLVSPRTWLAMISHLAGLFLGLAVMVVVVTGLSLGFSLLVLALVGLPILGL
Ga0207695_111891531	3300025913	Corn Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGIAIMVVVVTGLSLGFSLL
Ga0207671_102643522	3300025914	Corn Rhizosphere	MFLVRDLVSPRTWLAMISHLAGLFLGLAVMVVVVTGLSLGFSLLVLALVGLPILGLTLRAATL
Ga0207693_114354081	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MFLVRDLVSPRTWLAMTSHLAGLVLGIAAFVVIVTGLCLGYSLLVLALVGLPVLGLTLRLASWFAV
Ga0207663_100527572	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MFLVRDLVSPRTWLAMTSHLAGLILGLACFVVIVTGLSLGFSLLVLALV
Ga0207700_115405211	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGLGVMVVFVTGLSLGFS
Ga0207664_105680161	3300025929	Agricultural Soil	MFLVRDLVSPRTWLAMTSHLAGLVIGFAVIFVFTFGLGFGFSLVVIALVGL
Ga0207664_109289972	3300025929	Agricultural Soil	MFLVRDLVSPRTWLAMTSHLAGLFTGLVAMVVLITGLSLGFSLLVLALVGLPILGLTLRA
Ga0207665_103752091	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLGFGFSLVVIALV
Ga0207661_113063441	3300025944	Corn Rhizosphere	MFLVRDLVSPRTWLAMTSHLAGLILGLAYFVVIVTGLTLGYSLLVLALVGLPLLGLTLRLASWFA
Ga0207678_101027981	3300026067	Corn Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGIAIMVVVVTGLNLGFSLLVLAL
Ga0209159_12382221	3300026343	Soil	MFLLRDLVSPRTWLAMISHLAGLFLGLAVIVVFVTGLSLGFSLLVLALAGDEDHY
Ga0209074_101049972	3300027787	Agricultural Soil	MFLVRDLVSPRTWLAMISHLAGLFLGIAILVVVVTGLSLGFSLLVLAL
Ga0268266_107262361	3300028379	Switchgrass Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGIAIMVVVVTGLSL
Ga0268266_115839022	3300028379	Switchgrass Rhizosphere	MFLLRDLVSPRTWLAMISHLAGLFLGIAIMVVVVTGLSLGFSLLVLALTGLPI
Ga0307304_100326782	3300028885	Soil	MFLVRDLVSPRTWLAMISHLAGLVIGFAVIFVFTFGLAFGFSLVVLALVGLPVLGVTLRFAEWFATAERARF
Ga0302178_104851482	3300030013	Palsa	MFLFRDLVSPRTWLAFTHNVAGFVIGIAAFVVVITGITVGT
Ga0318516_106519862	3300031543	Soil	MFLLRDLVSARTWLAMTQHLAGLFIGLVVFAILTVGLSSGVSLLVLA
Ga0318528_104062981	3300031561	Soil	MFLVRDLVSPRTWLAMTSHLAGLFTGLAVMVVVVTGLSLGFSLVVLALVGLPLLGRRSPRPPRRSG
Ga0318528_107038582	3300031561	Soil	MFLLRDLVSPRTWLAMTSHLAGLFTGLLVMLVVVIGLSLGFS
Ga0318573_107330042	3300031564	Soil	MFLLRDLVSPRTWLAMVSHLAGLFMGLAVLVVFITGLSLGFSLLVLALVGLPILGLTLRAATLYAT
Ga0318515_103181632	3300031572	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVLVT
Ga0318574_105049241	3300031680	Soil	MFLLRDLVSARTWLAMTQHLAGLFVGLAVFIVFTVGLSTGASHTVTP
Ga0318572_101681372	3300031681	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVLVTGLSLGFSLLVLAL
Ga0318496_100959442	3300031713	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVLVTGLSLGLSLLVLALVGLPILGLTLG
Ga0318496_102220802	3300031713	Soil	MFLLRDLVSARTWLAMTQHLAGLFIGLAVFTVFTVGLSMGVSLLVLALVGLPLLG
Ga0306917_114162371	3300031719	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVVVTGLSLGFS
Ga0318501_102729622	3300031736	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVVVTGLSLGFSLLVLA
Ga0318501_103102512	3300031736	Soil	MFLLRDLVSARTWLAMTQHLAGLFVGLAVFIVFTVGLSTGASLLV
Ga0318501_104868421	3300031736	Soil	MFLLRDLVSPRSWLAMISHLAGLFMGLAVLVVIVTGLSLGFSLLVLALVGLPILGLTLRAATLYAV
Ga0306918_103646102	3300031744	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVLVTGLSLGFSLLVLALVGLPILGLT
Ga0306918_107634621	3300031744	Soil	MFLVRDLVSPRTWLAMTSHLVGLFIGLLVMVVIVTGLSLGFSLVVLALV
Ga0318502_106711212	3300031747	Soil	MFLLRDLVSPRTWLAMTSHLAGVFTGLVVMLVVVIGLSLGFSLVVLA
Ga0318492_100303462	3300031748	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVLVTGLSLGLSLLVLALVGLP
Ga0318554_102994162	3300031765	Soil	MFLVRDLVSPRTWLAMTSHLAGLFTGLAVMVVVVTGLSLGFSLVVLALVGLPLLGRRSPRPPRRSGQKIASRTPIAV
Ga0318509_104596981	3300031768	Soil	MFLVRDLVSPRTWLAMTSHLVGLFIGLLVMVVIVTGLSLGFSLVVLALVGLPL
Ga0318546_103553551	3300031771	Soil	MFLLRDLVSARTWLAMTQHLAGLFVGLAVFIVFTVGLSTGASLLVLALVGLP
Ga0318543_102498312	3300031777	Soil	MFLVRDLVSPRTWLAMTSHLTGLFLGLAVIVVLVTGLSLGFSL
Ga0318566_105594472	3300031779	Soil	MVLLRDLVSPRTWLAMISHLAGLFMGIAVLVVVVTGLSLGFSLLVLALVGLPI
Ga0318547_110864692	3300031781	Soil	MFLLRDLVSPRSWLAMISHLAGLFMGLAVLVVIVTGLSLGFSLLVLALVGL
Ga0318552_102306392	3300031782	Soil	MFLVRDLVSPRTWLAMTSHLAGLFMGLLVMVVVVTGLSLGFSLLVLALVGLPLLGLT
Ga0318552_102642463	3300031782	Soil	AMFLVRDLVSPRTWLAMTSHLAGLFTGLAVMVVVVTGLSLGFSLVVLALVGLPLLGRRSPRPPRRSGQKIASRTPIAV
Ga0318552_104846462	3300031782	Soil	MFLLRDLVSPRTWLAMTSHLAGLFTGLVVMLVVVTGLSLGFSLVVLA
Ga0318550_102824961	3300031797	Soil	MFLVRDLVSPRTWLAMTSHLTGLFLGLAVIVVLVTGLSLGFSLLVLALVG
Ga0318565_100695941	3300031799	Soil	MFLVRDLVSPRTWLAMTSHLTGLFLGLAVIVVLVTGLSLGFSLLVLALVGLPILGLTLRAAAYS
Ga0318565_103511722	3300031799	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVVVTGLSLGFSLLVLAL
Ga0318568_108686122	3300031819	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVVVTGLSLGFSLLVLALVGLPILGLTLR
Ga0318511_102185022	3300031845	Soil	MFLLRDLVSPRSWLAMISHLAGLFMGLAVLVVIVTGLSLGFSLLVLALVGLPI
Ga0318512_102852132	3300031846	Soil	MFLLRDLVSARTWLAMTQHLAGLFVGLAVFIVFTVGLSTGASLLVLALVGLPLLGVTVW
Ga0318512_106104101	3300031846	Soil	MFLVRDLVSPRTWLAMTSHLAGLFTGLAVMVVVVTGLSLGFSLVVLALVGLPLLGRRSPRPP
Ga0318495_100991271	3300031860	Soil	MFLLRDLVSPRTWLAMVSHLAGLFMGLAVLVVFVTGLSLGFSLLVLAL
Ga0306925_118590691	3300031890	Soil	MFLVRDLVSPRTWLAMTSHLAGLFTGLAVMVVVVTGLSLGFSLVVLALVGLPLLGRRSPRPPRRTG
Ga0318520_102152121	3300031897	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVLVTGLSLGLSL
Ga0318520_106904552	3300031897	Soil	MFLVRDLVSPRTWLAMTSHLAGLFTGLAVMVVVVTGLSLGFSL
Ga0306921_100843774	3300031912	Soil	MFLVRDLVSPRTWLAMTSHLTGLFLGLAVIVVLVTGLSLGFSLL
Ga0308174_119006961	3300031939	Soil	MFLVRDLVSPRTWLAMTSHLAGLVLGIAAFVVIVTGLSLGY
Ga0310909_101849201	3300031947	Soil	MFLLRDLVSARTWLAMTQHLAGLFIGLAVFTVFTVGLSMGVSLLVLALVGLP
Ga0310909_104553091	3300031947	Soil	MFLVRDLVSPRTWLAMTSHLTGLFLGLAVIVVLVTGLSLGF
Ga0310909_116750691	3300031947	Soil	MFLVRDLVSPRTWLAMTSHLAGLFMGLLVMVVVVTGLSLGFSLLVLALVGLPLLGLTLRLAGW
Ga0306926_112610711	3300031954	Soil	MFLVRDLVSPRTWLAMTSHLAGLFMGILVMVVVVTGLSLGFSLLVLALVGLPLLG
Ga0306926_116162491	3300031954	Soil	MFLVRDLVSPRTWLAMTSHLVGLFIGLLVMVVIVTGLSLGF
Ga0318562_103957682	3300032008	Soil	MFLVRDLVSPRTWLAMTSHLAGLFTGLVVMVVVVTGLSLGFSLVVLALVGLPLLGLT
Ga0318562_105112712	3300032008	Soil	MFLVRDLVSPRTWLAMTSHLAGLFMGILVMVVVVTGLSLGFSLLVLALVGLPLLGLT
Ga0318562_105485452	3300032008	Soil	MFLVRDLVSPRTWLAMTSHLAGLFMGLLVMVVVVTGLSLGFSLLV
Ga0318562_106520642	3300032008	Soil	MFLLRDLVSPRTWLAMVSHLAGLFMGLAVLVVFITGLSLGFSL
Ga0318563_103721612	3300032009	Soil	MFLLRDLVSARTWLAMTQHLAGLFIGVAVFTIIIVGLSTGFSLLVLALVGLPLLGMT
Ga0318569_103721922	3300032010	Soil	MFLLRDLVSPRTWLAMTSHLAGLLMGLLVMLVVVIGLSLGFSLLV
Ga0318524_104282782	3300032067	Soil	MFLVRDLVSPRTWLAMTSHLAGLFMGLLVMVVVVTGLS
Ga0318524_105562512	3300032067	Soil	MFLLRDLVSARTWLAMTQHLAGLFVGLAVFIVFTVGLSTGASLLVLALVG
Ga0318553_103547791	3300032068	Soil	MFLVRDLVSPRTWLAMTSHLVGLFIGLLVMVVIVTGLSLGFSLVV
Ga0318553_107709211	3300032068	Soil	MFLVRDLVSPRTWLAMTSHLAGLFTGLAVMVVVVTGLSLGFSLVVL
Ga0306924_100780571	3300032076	Soil	MFLVRDLVSPRTWLAMTSHLAGLFMGLRVMVVVVTGLSLGFSLLVLALVG
Ga0318525_103707242	3300032089	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVVVTG
Ga0307472_1005771112	3300032205	Hardwood Forest Soil	MFLLRDLVSPRTWLAMISHLAGLFLGIAIMVVVVTGLSLGFSLLVLALT
Ga0306920_1012052022	3300032261	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVVVTGLSLG
Ga0306920_1032179632	3300032261	Soil	MFLLRDLVSPRTWLAMTSHLAGVFTGLVVMLVVVIGLSLGFSLVVLALAGLPLLGLTLRFADWFA
Ga0335085_102136181	3300032770	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAVMVVLITGLSLGFSLLVLALTGLPIL
Ga0335085_113537732	3300032770	Soil	MFLVRDLVSPRTWLAMTSHLAGLFMGLLVMVVIVTGLSLGFSLLVLALVGLPLLGLT
Ga0335079_100720663	3300032783	Soil	MFLLRDLVSPRTWLAMISHLAGLLLGLAVMVVFVTGLSLGFSLLVLALTGLPIL
Ga0335080_123514011	3300032828	Soil	MFLLRDLVSPRTWLAMTSHLAGLFTGLLVMLVVVTGLSL
Ga0335069_102995941	3300032893	Soil	MFLVRDLVSPRTWLAMTSHLAGLILGLAYFVVIVTGLSLGFSLLVLALVGLPLLGLTL
Ga0335069_107404041	3300032893	Soil	MFLVRDLVSPRTWLAMTSHLAGLFIGILVMVAVITGLSLGFSLLVLAL
Ga0335083_106857992	3300032954	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAVMVVLITGLSLGFSLLVLA
Ga0310914_117792372	3300033289	Soil	MFLLRDLVSARTWLAMTQHLAGLFIGVAVFTIIIVGLSTGFSLLVLALVGLPLLGVTVELAHWFA
Ga0318519_103497282	3300033290	Soil	MFLLRDLVSPRTWLAMISHLAGLFMGLAAMVVLVTGLSLGFSLLVLALAA
Ga0316214_10452781	3300033545	Roots	MFLIRDLVSPRTWLAMVHHLTGLVIGSAIIFVVMTGLGFGIGLLPLALIGLPIL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033893

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences