Metagenome Family F034132

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F034132
Family Type	Metagenome
Number of Sequences	175
Average Sequence Length	54 residues
Representative Sequence	MPTHTTSQMDKPTGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAK
Number of Associated Samples	116
Number of Associated Scaffolds	175

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.29 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	99.43 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (70.286 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.143 % of family members)
Environment Ontology (ENVO)	Unclassified (34.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.78% β-sheet: 0.00% Coil/Unstructured: 54.22%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 175 Family Scaffolds
PF13305	TetR_C_33	47.43
PF00440	TetR_N	44.00
PF02518	HATPase_c	1.14
PF07883	Cupin_2	0.57
PF00294	PfkB	0.57
PF00313	CSD	0.57
PF07690	MFS_1	0.57
PF04945	YHS	0.57
PF01243	Putative_PNPOx	0.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.29 %
All Organisms	root	All Organisms	29.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.29 %
cellular organisms	root	All Organisms → cellular organisms	29.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	26.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.29 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.14 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.57 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.29 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.57 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.29 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	5.71 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.57 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.57 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.57 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.29 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	5.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.57 %
Capillimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae	0.57 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.57 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.29 %
Longispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Longispora	5.71 %
Myxococcales bacterium SG8_38	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium SG8_38	0.57 %
Capillimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium	0.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.57 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.29 %
Longispora fulva	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Longispora → Longispora fulva	5.71 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	0.57 %
Myxococcales bacterium SG8_38	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium SG8_38	0.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.57 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.57 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725004\|GPKC_F5V46DG03GUTQA	Not Available	514	Open in IMG/M
3300000956\|JGI10216J12902_105625603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1213	Open in IMG/M
3300001305\|C688J14111_10184174	Not Available	646	Open in IMG/M
3300001686\|C688J18823_10381392	Not Available	914	Open in IMG/M
3300001686\|C688J18823_10503999	Not Available	776	Open in IMG/M
3300001686\|C688J18823_10677748	Not Available	656	Open in IMG/M
3300001686\|C688J18823_10699420	Not Available	645	Open in IMG/M
3300002568\|C688J35102_117843086	Not Available	510	Open in IMG/M
3300002568\|C688J35102_118022010	Not Available	523	Open in IMG/M
3300002568\|C688J35102_118456995	Not Available	561	Open in IMG/M
3300002568\|C688J35102_118635510	Not Available	579	Open in IMG/M
3300002568\|C688J35102_118662432	Not Available	582	Open in IMG/M
3300002568\|C688J35102_119612342	Not Available	731	Open in IMG/M
3300002568\|C688J35102_119837663	All Organisms → cellular organisms → Bacteria → Terrabacteria group	789	Open in IMG/M
3300002568\|C688J35102_120035371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	854	Open in IMG/M
3300002568\|C688J35102_120368959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Longispora → Longispora fulva	1019	Open in IMG/M
3300002568\|C688J35102_120732615	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300004081\|Ga0063454_100229212	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300004081\|Ga0063454_101867162	Not Available	528	Open in IMG/M
3300004081\|Ga0063454_102019566	Not Available	510	Open in IMG/M
3300004114\|Ga0062593_101238796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Longispora → Longispora fulva	786	Open in IMG/M
3300004153\|Ga0063455_100605380	Not Available	714	Open in IMG/M
3300004153\|Ga0063455_101411784	Not Available	538	Open in IMG/M
3300004153\|Ga0063455_101656044	Not Available	506	Open in IMG/M
3300004157\|Ga0062590_101543009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Longispora → Longispora fulva	669	Open in IMG/M
3300005327\|Ga0070658_10889805	Not Available	774	Open in IMG/M
3300005330\|Ga0070690_101751457	Not Available	506	Open in IMG/M
3300005334\|Ga0068869_101042668	Not Available	713	Open in IMG/M
3300005334\|Ga0068869_101684542	Not Available	566	Open in IMG/M
3300005334\|Ga0068869_101774423	Not Available	551	Open in IMG/M
3300005336\|Ga0070680_101167362	Not Available	666	Open in IMG/M
3300005339\|Ga0070660_101243449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300005353\|Ga0070669_100767606	Not Available	818	Open in IMG/M
3300005354\|Ga0070675_102116213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300005356\|Ga0070674_100237308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1426	Open in IMG/M
3300005365\|Ga0070688_101565051	Not Available	538	Open in IMG/M
3300005441\|Ga0070700_100485085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	948	Open in IMG/M
3300005536\|Ga0070697_100893550	Not Available	788	Open in IMG/M
3300005543\|Ga0070672_101326567	Not Available	643	Open in IMG/M
3300005544\|Ga0070686_100747213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Longispora → Longispora fulva	784	Open in IMG/M
3300005548\|Ga0070665_101320315	Not Available	731	Open in IMG/M
3300005564\|Ga0070664_100802911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	880	Open in IMG/M
3300005577\|Ga0068857_100884275	Not Available	856	Open in IMG/M
3300005615\|Ga0070702_101741890	Not Available	519	Open in IMG/M
3300005842\|Ga0068858_101084679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Longispora → Longispora fulva	786	Open in IMG/M
3300006046\|Ga0066652_101919190	Not Available	531	Open in IMG/M
3300006755\|Ga0079222_12331152	Not Available	535	Open in IMG/M
3300006806\|Ga0079220_10456858	Not Available	857	Open in IMG/M
3300006881\|Ga0068865_100481088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1032	Open in IMG/M
3300006881\|Ga0068865_101550567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300006918\|Ga0079216_11756177	Not Available	531	Open in IMG/M
3300007004\|Ga0079218_11251701	Not Available	775	Open in IMG/M
3300007004\|Ga0079218_12108893	Not Available	650	Open in IMG/M
3300009098\|Ga0105245_11757651	Not Available	673	Open in IMG/M
3300009174\|Ga0105241_10782004	Not Available	878	Open in IMG/M
3300009545\|Ga0105237_11656825	Not Available	647	Open in IMG/M
3300009789\|Ga0126307_10328318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1231	Open in IMG/M
3300009789\|Ga0126307_11036881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300009789\|Ga0126307_11759675	Not Available	504	Open in IMG/M
3300009840\|Ga0126313_10534090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	941	Open in IMG/M
3300009840\|Ga0126313_10843989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	746	Open in IMG/M
3300009840\|Ga0126313_11285959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300009840\|Ga0126313_11391918	Not Available	581	Open in IMG/M
3300010036\|Ga0126305_10939071	Not Available	591	Open in IMG/M
3300010037\|Ga0126304_10631728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722	Open in IMG/M
3300010038\|Ga0126315_10389967	Not Available	874	Open in IMG/M
3300010039\|Ga0126309_10126110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1349	Open in IMG/M
3300010039\|Ga0126309_10386086	Not Available	834	Open in IMG/M
3300010039\|Ga0126309_10669925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300010039\|Ga0126309_11126877	Not Available	535	Open in IMG/M
3300010040\|Ga0126308_10957056	Not Available	599	Open in IMG/M
3300010040\|Ga0126308_10969695	Not Available	595	Open in IMG/M
3300010041\|Ga0126312_10542966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	834	Open in IMG/M
3300010041\|Ga0126312_11050298	Not Available	597	Open in IMG/M
3300010041\|Ga0126312_11105991	Not Available	582	Open in IMG/M
3300010041\|Ga0126312_11224423	Not Available	554	Open in IMG/M
3300010042\|Ga0126314_10510655	Not Available	873	Open in IMG/M
3300010044\|Ga0126310_10033735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2709	Open in IMG/M
3300010044\|Ga0126310_10570603	Not Available	839	Open in IMG/M
3300010044\|Ga0126310_10776826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	734	Open in IMG/M
3300010044\|Ga0126310_11693302	Not Available	525	Open in IMG/M
3300010045\|Ga0126311_10520061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Longispora → Longispora fulva	933	Open in IMG/M
3300010045\|Ga0126311_11564859	Not Available	554	Open in IMG/M
3300010166\|Ga0126306_10255231	Not Available	1339	Open in IMG/M
3300010166\|Ga0126306_10371166	Not Available	1114	Open in IMG/M
3300010401\|Ga0134121_12271250	Not Available	581	Open in IMG/M
3300011119\|Ga0105246_10892456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	796	Open in IMG/M
3300011119\|Ga0105246_12160362	Not Available	541	Open in IMG/M
3300012021\|Ga0120192_10073822	Not Available	650	Open in IMG/M
3300012212\|Ga0150985_113147606	Not Available	529	Open in IMG/M
3300012212\|Ga0150985_115889401	Not Available	701	Open in IMG/M
3300012469\|Ga0150984_115549042	Not Available	635	Open in IMG/M
3300012511\|Ga0157332_1032322	Not Available	673	Open in IMG/M
3300012884\|Ga0157300_1058152	Not Available	626	Open in IMG/M
3300012897\|Ga0157285_10380170	Not Available	503	Open in IMG/M
3300012929\|Ga0137404_10413108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1192	Open in IMG/M
3300012939\|Ga0162650_100032948	Not Available	800	Open in IMG/M
3300013307\|Ga0157372_10932114	Not Available	1007	Open in IMG/M
3300013308\|Ga0157375_13321634	Not Available	536	Open in IMG/M
3300014326\|Ga0157380_11532427	All Organisms → cellular organisms → Bacteria → Terrabacteria group	720	Open in IMG/M
3300014497\|Ga0182008_10504594	Not Available	666	Open in IMG/M
3300014745\|Ga0157377_10783186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	701	Open in IMG/M
3300014745\|Ga0157377_11151207	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium SG8_38	597	Open in IMG/M
3300015200\|Ga0173480_11262388	Not Available	502	Open in IMG/M
3300015373\|Ga0132257_104070050	Not Available	532	Open in IMG/M
3300017965\|Ga0190266_11294496	Not Available	512	Open in IMG/M
3300018028\|Ga0184608_10182588	Not Available	915	Open in IMG/M
3300018422\|Ga0190265_12780845	Not Available	585	Open in IMG/M
3300018422\|Ga0190265_12975364	Not Available	566	Open in IMG/M
3300018432\|Ga0190275_10443572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1319	Open in IMG/M
3300018432\|Ga0190275_11404904	Not Available	775	Open in IMG/M
3300018432\|Ga0190275_11715896	Not Available	706	Open in IMG/M
3300018432\|Ga0190275_11801089	All Organisms → cellular organisms → Bacteria → Terrabacteria group	691	Open in IMG/M
3300018465\|Ga0190269_10301263	Not Available	935	Open in IMG/M
3300018469\|Ga0190270_10602022	Not Available	1071	Open in IMG/M
3300018476\|Ga0190274_10900518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	952	Open in IMG/M
3300018476\|Ga0190274_11887387	Not Available	693	Open in IMG/M
3300018481\|Ga0190271_11202378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Longispora → Longispora fulva	880	Open in IMG/M
3300019767\|Ga0190267_10370869	Not Available	783	Open in IMG/M
3300022756\|Ga0222622_11335513	Not Available	528	Open in IMG/M
3300024430\|Ga0196962_10121091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Longispora → Longispora fulva	820	Open in IMG/M
3300025901\|Ga0207688_10521670	Not Available	745	Open in IMG/M
3300025907\|Ga0207645_10727426	Not Available	675	Open in IMG/M
3300025927\|Ga0207687_11023883	Not Available	708	Open in IMG/M
3300025932\|Ga0207690_11681396	Not Available	530	Open in IMG/M
3300025935\|Ga0207709_11407263	Not Available	578	Open in IMG/M
3300025936\|Ga0207670_10420121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300025937\|Ga0207669_10412408	All Organisms → cellular organisms → Bacteria → Proteobacteria	1061	Open in IMG/M
3300025938\|Ga0207704_10334830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300025938\|Ga0207704_10706847	Not Available	835	Open in IMG/M
3300025938\|Ga0207704_10761422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Longispora → Longispora fulva	806	Open in IMG/M
3300025938\|Ga0207704_10915956	Not Available	738	Open in IMG/M
3300025944\|Ga0207661_10453176	Not Available	1169	Open in IMG/M
3300025945\|Ga0207679_11545303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300025981\|Ga0207640_10504515	Not Available	1008	Open in IMG/M
3300026023\|Ga0207677_11105335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Longispora → Longispora fulva	723	Open in IMG/M
3300026023\|Ga0207677_11260215	Not Available	678	Open in IMG/M
3300026023\|Ga0207677_11438124	Not Available	636	Open in IMG/M
3300026035\|Ga0207703_11009281	Not Available	798	Open in IMG/M
3300026088\|Ga0207641_12053468	Not Available	573	Open in IMG/M
3300026095\|Ga0207676_12028300	Not Available	574	Open in IMG/M
3300026116\|Ga0207674_11705035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	598	Open in IMG/M
3300028379\|Ga0268266_11423851	Not Available	669	Open in IMG/M
3300028587\|Ga0247828_10234376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	977	Open in IMG/M
3300028587\|Ga0247828_10513717	Not Available	714	Open in IMG/M
3300028592\|Ga0247822_11893460	Not Available	511	Open in IMG/M
3300028597\|Ga0247820_10607035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	755	Open in IMG/M
3300028597\|Ga0247820_11142325	Not Available	560	Open in IMG/M
3300028704\|Ga0307321_1132692	Not Available	522	Open in IMG/M
3300028717\|Ga0307298_10147294	Not Available	683	Open in IMG/M
3300028722\|Ga0307319_10262058	Not Available	570	Open in IMG/M
3300028754\|Ga0307297_10278880	Not Available	600	Open in IMG/M
3300028755\|Ga0307316_10199464	Not Available	721	Open in IMG/M
3300028768\|Ga0307280_10118057	Not Available	895	Open in IMG/M
3300028793\|Ga0307299_10375437	Not Available	533	Open in IMG/M
3300028812\|Ga0247825_11178686	Not Available	559	Open in IMG/M
3300028814\|Ga0307302_10107857	Not Available	1333	Open in IMG/M
3300028880\|Ga0307300_10131459	Not Available	776	Open in IMG/M
3300028880\|Ga0307300_10141846	Not Available	751	Open in IMG/M
3300028881\|Ga0307277_10551832	Not Available	517	Open in IMG/M
3300030336\|Ga0247826_10620685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	831	Open in IMG/M
3300030336\|Ga0247826_11306994	Not Available	584	Open in IMG/M
3300030336\|Ga0247826_11658768	Not Available	521	Open in IMG/M
3300031852\|Ga0307410_11656096	Not Available	566	Open in IMG/M
3300031903\|Ga0307407_11707370	Not Available	501	Open in IMG/M
3300031938\|Ga0308175_100458569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1346	Open in IMG/M
3300031995\|Ga0307409_102721137	Not Available	523	Open in IMG/M
3300032002\|Ga0307416_100652716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1137	Open in IMG/M
3300032002\|Ga0307416_102592594	Not Available	605	Open in IMG/M
3300032002\|Ga0307416_103624759	Not Available	517	Open in IMG/M
3300032004\|Ga0307414_12125533	Not Available	524	Open in IMG/M
3300032005\|Ga0307411_11266518	Not Available	671	Open in IMG/M
3300032005\|Ga0307411_12007834	Not Available	540	Open in IMG/M
3300032080\|Ga0326721_10137166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	1224	Open in IMG/M
3300032080\|Ga0326721_11055945	Not Available	521	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.29%
Host-Associated	Host-Associated	33.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.14%
Plants	Host-Associated → Plants	33.71%
Aquatic	Environmental → Aquatic	1.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.14%
Sediment	Environmental → Aquatic → Sediment	1.14%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.86%
Loam	Environmental → Terrestrial → Soil → Loam	17.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.14%
Sand	Environmental → Terrestrial → Soil → Sand	0.57%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	12.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.00%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.14%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.57%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.14%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	16.57%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	12.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.14%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.14%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.57%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.57%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.57%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.57%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.57%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725004	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKC_00076560	2067725004	Soil	MQTHRTTQVVKPAGAPARLLLGLTGTLFALLILNLAVFDDLRVDPSAGVLETFAKPQHLASLVAVL
JGI10216J12902_1056256031	3300000956	Soil	MTDSTDMSSGRSARQLLGLTSTLLVLLVLNLTVFDDLRTDATIGVLETFTKPQHLSSIVA
C688J14111_101841741	3300001305	Soil	MPTHTTQMDQPSGRPARLLLGLTGALLALLILNLAVFDDLRVDPSAGVLETFAK
C688J18823_103813921	3300001686	Soil	MLPVMPTHTSSQMDKPRRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFA
C688J18823_105039992	3300001686	Soil	MPTHTNTRTDQPSGHPARLLLGLTGALLALLILNLAVFDDLRIDRSA
C688J18823_106777482	3300001686	Soil	MPTSRATQTEPVGSSAGLLLGLTGALFALLVLNLTVFDDLRVDPSAGALETFTKPQHLASLVAVLVAS
C688J18823_106994201	3300001686	Soil	MDKPTQRHARLLLGLTGALLALLILNLAVFDDLRIDPSAGVFETFAKPQHLSSLVAVLI
C688J35102_1178430861	3300002568	Soil	MSTKSSTHIDQPTRRSAGLLLGLTGALLALLLLNLAVFDDLRIDPSAGVLETFAKPQHLS
C688J35102_1180220102	3300002568	Soil	MPTHRNTHLHRPSGPSSRLLLGLTGALLALLILNLAVFDDLRTDPSAGVLD
C688J35102_1184569952	3300002568	Soil	MSTHTHPHIGQPSRRRPRLLLGLTSALFALLVLNLAVFDDLRVDPSAGVLETFTKPQH
C688J35102_1186355101	3300002568	Soil	MPTHTALHTDKPSGRPARLLLGLTGSLLTLLVLNLAVFDDLRVD
C688J35102_1186624321	3300002568	Soil	MPTHTSSHTTKPSGRPARLLLGLTGGLLALLVLNLAVFDDLRVDP
C688J35102_1196123422	3300002568	Soil	MPTHTTPHTDKPSRRPARLLLGLTGGLLALLVLNLAVFDDLRVDPSAGVLETFTKPQH
C688J35102_1198376631	3300002568	Soil	MTTQTSTHTAKPSGSPRRLLLGLTGGLLALLILNLAVFDDLRIDSSA
C688J35102_1200353712	3300002568	Soil	MPTHTSTQMDKLSGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFTKPQHLL
C688J35102_1203689592	3300002568	Soil	MQTHIAPYTDKSAGRPARLLLGLTGGLLALLVLNLAVFDDLRVDPAAGVLETFTKPQHLSSLVAVVIAAVLVA
C688J35102_1207326151	3300002568	Soil	MPTHTNTRTDQPSGHPARLLLGLTGALLALLILNLAVFDDLRIDRSAGVLETFTKPQHLASL
Ga0063454_1002292123	3300004081	Soil	MTTYRNAHPAKASAAPTRLLLSLTGALLGLLILNLVVFDDLRIDSS
Ga0063454_1018671621	3300004081	Soil	MPTHTNHRTDKPSGRPAPLLLGLTGGLLALLVLNLAVFDDLRIDPSAGVL
Ga0063454_1020195662	3300004081	Soil	MSTQSSTHIDQPTRRPAGLLLGLCGALLALLILNLAVFDDLR
Ga0062593_1012387962	3300004114	Soil	MTTHQNAHTDKASGSPRRLLLGLTGALLALLILNLAVFDDLRLDSSAGVLETFAKPQHLASLVAVLIAG
Ga0063455_1006053802	3300004153	Soil	MSTQSSTSIDQPSRHRAGLLLGLTGALLALLLLNLAVFDDLRIDASAGVLETFTKPQHLSSLVAVLVVA
Ga0063455_1014117841	3300004153	Soil	MPTNTTLHTAKPSGRPARLLLGLTGGLLALLVLNLAVFDDLRVDPSAGVLETFTKPQHLA
Ga0063455_1016560441	3300004153	Soil	MQTPLTPHTAESAGRPARLLLGLTGGLLALLVLNLAVFDDL
Ga0062590_1015430091	3300004157	Soil	MTTHQDAHTDKASGPSRRLLLGLTGALLALLILNLAVFDDLR
Ga0070658_108898051	3300005327	Corn Rhizosphere	MQTHVTPHTDKSAGRPARLLLGLTGGLLALLVLNLAVFDDLRVDPSAGVLETFTKPQHLSSLVAVVIAA
Ga0070690_1017514571	3300005330	Switchgrass Rhizosphere	MPTHTSSQTDKPAGRGTRLLLGLTGGLLALLILNLAVFDDLR
Ga0068869_1010426682	3300005334	Miscanthus Rhizosphere	MPTHTTSQMDKPTGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAK
Ga0068869_1016845421	3300005334	Miscanthus Rhizosphere	MQTHVTPHTDKSAGRPARLLLGLTGGLLALLVLNLAVFDDLRVDPSAGV
Ga0068869_1017744231	3300005334	Miscanthus Rhizosphere	MNKPAGRAARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQ
Ga0070680_1011673622	3300005336	Corn Rhizosphere	MPTQPTPHTDKPSGRPTRLLLALTGGLLALLVLNLAIFDDLRVDPS
Ga0070660_1012434492	3300005339	Corn Rhizosphere	MTALRTSLTDKTSGSPRRLLLGLTGALLALLILNLAVFDDLR
Ga0070669_1007676062	3300005353	Switchgrass Rhizosphere	MGKSAGRAAPLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETF
Ga0070675_1021162132	3300005354	Miscanthus Rhizosphere	MTTLRTAHTDKASGSPRRLVLGLTGALLALLILNLAVFDDLRID
Ga0070674_1002373083	3300005356	Miscanthus Rhizosphere	MPTHTSSQTDKPAGRGTRLLLGLTGGLLALLILNLAVFDDLRVDPSAGVLETFTKPQHLSSLV
Ga0070688_1015650511	3300005365	Switchgrass Rhizosphere	MPTHTSSQMGKSAGRAAPLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQHL
Ga0070700_1004850851	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTSHEDRHTDKTSGSPRRLLLGLTGALLGLLILNLAVFDDLRLDSSA
Ga0070697_1008935502	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPNHINTHKPSGHRAARLLLGLTGALLALLILNLAVFDDLRIDPSAG
Ga0070672_1013265671	3300005543	Miscanthus Rhizosphere	MDKPARRAARLLLGLTGALLALLILNLAVFDDLRIDPSA
Ga0070686_1007472132	3300005544	Switchgrass Rhizosphere	MPTLRTAHTDKASGSPRRLVLGLTGALLALLILNLAVFDDLRLDSSAGVLETFAKPQHLASLLAVLI
Ga0070665_1013203151	3300005548	Switchgrass Rhizosphere	MPTHTTPHTDKPSGRPARLLLGLTGGLLALLVLNLVLFDDLRGDPSAGVLETF
Ga0070664_1008029113	3300005564	Corn Rhizosphere	MTTHDLPHTDKTSGSPRRLLLGLTGALLALLILNLAVFDDLR
Ga0068857_1008842751	3300005577	Corn Rhizosphere	MQTHVTPHTDKSAGRPARLLLGLTGGLLALLVLNLAVFDDLRVDPSAGVLETFTKPQHLSSLVA
Ga0070702_1017418901	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MPIPTDLHMDKPFGRPERLLLGLTGALLALLILNLAVFDDLRIDPSA
Ga0068858_1010846791	3300005842	Switchgrass Rhizosphere	MTTLRTAHTDKASRSPRRPVLGLTGALLALLILNLAVFDDLR
Ga0066652_1019191902	3300006046	Soil	MFVRMSTPTPTNVNRPTGPTAGALLGLTGALFALLTLNLAVFDDLRVDSSAGVLETFTKPQHLSSLLAVLI
Ga0079222_123311522	3300006755	Agricultural Soil	MLLVMPTHTSAQHDNPTGRSARLLLGLTGALLGLLILNLAVFDDLRIDPSAGVLE
Ga0079220_104568581	3300006806	Agricultural Soil	MPTHNTSQIDKPTERPARLLLGLTGALLALLILNLAVFDDL
Ga0068865_1004810883	3300006881	Miscanthus Rhizosphere	MTTLRTAHTDKASGSPRRLVLGLTGALLALLILNLAVFDDLR
Ga0068865_1015505672	3300006881	Miscanthus Rhizosphere	MDTPAGRPARLLLALTGALLGLLILNLAVFDDLRIDPSAGVLETFAK
Ga0079216_117561771	3300006918	Agricultural Soil	MPTHTSSQMDTPTGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQ
Ga0079218_112517011	3300007004	Agricultural Soil	MQTDTNTHIDKPSGHPAGLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFTKPQHLSSLVAVLIAA
Ga0079218_121088932	3300007004	Agricultural Soil	MPTTKNPHIDKPFGRFAGLLLGLTGALLALLILNLAVFDDLRIDPS
Ga0105245_117576511	3300009098	Miscanthus Rhizosphere	MGKSAGRAAPLLLGLTGALLALLILNLAVFDDLRIDP
Ga0105241_107820041	3300009174	Corn Rhizosphere	MGKSAGRAAPLLLGLTGALLALLILNLAVFDDLRIDPSAGLL
Ga0105237_116568251	3300009545	Corn Rhizosphere	MDKPAGRAARLLLGLTGLLLALLILNLAVFDDLRIDPSAGVLET
Ga0126307_103283181	3300009789	Serpentine Soil	MPTHANRHPQRPSGRPAGLLLALTSALLALLILNLAVFDDLRTDPSAGLLETFTKPQHLA
Ga0126307_110368811	3300009789	Serpentine Soil	MTTHQAAHTGETSGSPSRLLLGLTGALLALLILNLVVFDDLRVDS
Ga0126307_117596752	3300009789	Serpentine Soil	MPRPSGPPAGLLLGLASALLALLILNLAVFDDLRIDPSADAFETFTKPQHL
Ga0126313_105340901	3300009840	Serpentine Soil	MPTHANNHTGNAPGAPTGLLLGLTAALGALLILNLAVFDDLRIDPAAGVLETFTKPQHLASLVAVLIAA
Ga0126313_108439892	3300009840	Serpentine Soil	MPTPENTHIDSASRRPTGLLLGLTGALLTLLILNLAVFDDLR
Ga0126313_112859591	3300009840	Serpentine Soil	MPTHTSSQRDKSAGRAARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQ
Ga0126313_113919181	3300009840	Serpentine Soil	MPTPTNTHIDKPSGHPARLLLGLTGALLALLILNLAVFDDLRIDPS
Ga0126305_109390711	3300010036	Serpentine Soil	MPTHTNTHIDKPFGRPARLLLGLTGALLALLILNLAVFDDLRVDPSAGVLETFTKQQHLLSLVAVLIASVLV
Ga0126304_106317282	3300010037	Serpentine Soil	MPHHINTHKPSGHLAGLLLGLTGALLALLILNLAVFDD
Ga0126315_103899672	3300010038	Serpentine Soil	MPTPTNTHIDKPSGHPARLLLGLTGALLALLILNLAVFDDLRIDASAGVLD
Ga0126309_101261103	3300010039	Serpentine Soil	MPTHTNPHTDKPSGHSARLLLGLTGGLLALLVGNLAVFDDLRVDPSAGVLETFTKPQHL
Ga0126309_103860861	3300010039	Serpentine Soil	MSTLLHAFGRPAGLLLGLTCALLALLVLNLAVFDDLRTDPSAGLLETFTKPQHLSSLVAVLVAAALV
Ga0126309_106699252	3300010039	Serpentine Soil	MTTHRDAHTDKPSGSHSGLLLGLTGALLALLTLNLAVFDDLRIDSSAGVLGTF
Ga0126309_111268771	3300010039	Serpentine Soil	MQTHTTTHIDKPSGAPTGLLLGLTGSLLVLLILNLAVFDDL
Ga0126308_109570562	3300010040	Serpentine Soil	MPNHINTHKPSGHLAALLLGLTGALLALLILNLTVFDDLRIDPSAGPLETFTKPQHL
Ga0126308_109696952	3300010040	Serpentine Soil	MDKPDGRPARLLLGLTSALLALLILNLAVFDDLRIDPSAGVLETFTKPQHLSSLV
Ga0126312_105429662	3300010041	Serpentine Soil	MPTHSKTHIDKPSGSPAGLLLGLTSALFALLILNLAVFDDLRVDPSAGVLETFAKPQHL
Ga0126312_110502982	3300010041	Serpentine Soil	MDKPAGRPARLLLGLTGALLALLILNLAVFDDLRIDPAAGVLETFAKPQHLSSLVAVLIAGALVAF
Ga0126312_111059911	3300010041	Serpentine Soil	MQTHANTHIDEPSGHPAGLLLGLTGALLALLILNLAVFDDLRIDP
Ga0126312_112244232	3300010041	Serpentine Soil	MTTRTDAPTNKAFGPPHRLLLGLTGALLALLIVNLVVFDDLRIDSSAGVLDTFTKPQ
Ga0126314_105106552	3300010042	Serpentine Soil	MDTPIGRPARVLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQHLSSLVAVLIAGALVAFRHR
Ga0126310_100337351	3300010044	Serpentine Soil	MTTYTDALTQKAFGSPRRLLLGLTGALLALLILNLAVFDDLRIDSSAGVLDTF
Ga0126310_105706031	3300010044	Serpentine Soil	MQTHSHSKIDQPARHPVGLLLGLTGALLALLILNLAVFDDLRIDPSAGALD
Ga0126310_107768261	3300010044	Serpentine Soil	MPTHRNTHIHRPSGPPAGLLLGLTSALLALLILNLAV
Ga0126310_116933022	3300010044	Serpentine Soil	MTTHEDGRTDKASGPPAGLLLGLTGALMALLILNLAVFDDLRIDSSAGVVETFTKP
Ga0126311_105200612	3300010045	Serpentine Soil	MTTHEDGRTDKASGPPAGLLLGLTGALMALLILNLAVFDDLRIDSSAGVVETFT
Ga0126311_115648592	3300010045	Serpentine Soil	MSTHTSTHIAKPAGPFAGLLLGLTGALLTLLILNLAVFDDLRIDPSAGALETFSKPQHLASLVAVLVTA
Ga0126306_102552313	3300010166	Serpentine Soil	MFPRMPTHRNLQTDKPAGHPTGLLLGLTGALLALLILNLAVFDDLRIDSSAGALETFTKPQHLSSLVAVLIV
Ga0126306_103711662	3300010166	Serpentine Soil	MDKPDGRPARLLLGLTSALLALLILNLAVFDDLRIDPSAGVLETFTKPQH
Ga0134121_122712502	3300010401	Terrestrial Soil	MNKPAGRAARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQHLASLVAVLIAGA
Ga0105246_108924561	3300011119	Miscanthus Rhizosphere	MTTHEDAHTDKTSGSPRRLLLGLTGALLALLILNLAVFDDLRLDSSAGVLET
Ga0105246_121603621	3300011119	Miscanthus Rhizosphere	MFLPMPTQPTPHTDKPSGRPTRLLLALTGGLLALLVLNLAIFDDLRVDPSAG
Ga0120192_100738221	3300012021	Terrestrial	MDKPAGRAARLLLGLTGALLALLILNLAVFDDLRID
Ga0150985_1131476062	3300012212	Avena Fatua Rhizosphere	MNTHTVRPSGSPAGLLLGLTSALFALLVLNLAVFDDLRIDPSGGVLETFAKPQHLSSLIAVLLAAGFVVFKH
Ga0150985_1158894012	3300012212	Avena Fatua Rhizosphere	MSTHASTHIAKPSGRPARLLLALTGALLSLLILNLVVFDDLRIDSSAGVLETFDQ
Ga0150984_1155490422	3300012469	Avena Fatua Rhizosphere	MDKPAGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAK
Ga0157332_10323221	3300012511	Soil	MDTPARLLLGLTGALLALLILNLAVFDDLRIDPSA
Ga0157300_10581522	3300012884	Soil	MDKPTGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQHLASLVA
Ga0157285_103801701	3300012897	Soil	MTTLRTAHTDKASGSPRRLVLGLTGALLALLILNLAVFDDLRLDSSAGVLET
Ga0137404_104131083	3300012929	Vadose Zone Soil	MSTHSTTHKPSGHPAGLLLGLTSALLALLILNLAVFDDLRIDPSAGVLETF
Ga0162650_1000329482	3300012939	Soil	MPTHTNTHIDKPSGHPARLLLGLTGALLALLVLNLVVFDDLRID
Ga0157372_109321142	3300013307	Corn Rhizosphere	MPTHTTPHTDKPSGRPARLLLGLTGGLLALLVLNLVLFDDLRVDPSAGVLETFTKPQ
Ga0157375_133216341	3300013308	Miscanthus Rhizosphere	MDKPAGRAARLLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFTKPQHLSSLVA
Ga0157380_115324272	3300014326	Switchgrass Rhizosphere	MIPSTDKPSGRPARLLLGLTGALLALLLLNLAVFDDLRVDPSAGVLETFAKPQHLSSLVAVLIAGALVA
Ga0182008_105045942	3300014497	Rhizosphere	MPTQPDAHIDKPVGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGLLETFLKPQHLSSLV
Ga0157377_107831861	3300014745	Miscanthus Rhizosphere	MTTLRTAHTDKASGSPRRLVLGLTGALLALLILNLAVFDDLRLDSSAGVLETFAKPQHLASLLAVLIAGV
Ga0157377_111512071	3300014745	Miscanthus Rhizosphere	MTTRQDPHTDKTSGSPRRLLLVLTGALLALLVLNLAVFDDLRLDSSAG
Ga0173480_112623881	3300015200	Soil	MTTHRHAHTDKASGSPRRLLLGLTGALLALLILNLAVFDDLRLDSSAGVLET
Ga0132257_1040700501	3300015373	Arabidopsis Rhizosphere	MDKPAGRGARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQH
Ga0190266_112944962	3300017965	Soil	MPNHTSSQIDKPARRPAGLLLGLIGALLALLILNLA
Ga0184608_101825882	3300018028	Groundwater Sediment	MSTHMNTHIDKPSGHPAGLLLGLTGALLTLLILNLVVFDDLRIDPSAGVLETFAKPQ
Ga0190265_127808451	3300018422	Soil	MLTHNRPHKRSAELLLGLTAALFALLVLNLIVFDDLRTDPSAGLLETLTKPQHLSSILAA
Ga0190265_129753641	3300018422	Soil	MPTNRNTHIHTPSGRPAGLLLGLTGALLALLILNLAVFDDLRIDQSAGALETFTKPQHLSSLVAVLIAGALV
Ga0190275_104435723	3300018432	Soil	MPTHTNIHIDEPSGRPARLLLGLTGALLALLILNLAVFDDLR
Ga0190275_114049042	3300018432	Soil	MPTHKSFHIDKPARAPTGVLLGLAGALLALLILNLAVFDDLRTDPSAGALETFLAPQHLSSLVAVLVAAVLLAF
Ga0190275_117158961	3300018432	Soil	MPTPLTPRTDKRAQLLLGLTGGLLALLILNLAVFDDLRVDPSAGVL
Ga0190275_118010891	3300018432	Soil	MTTHEVTPADTASGPPTRRLLGLTGALLALLILNLAVFDDLRIDPSAGV
Ga0190269_103012632	3300018465	Soil	MDKPSGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQHLASLLAVLIAGGLVAFKHR
Ga0190270_106020223	3300018469	Soil	MPTHPNPRIDKPSGRPARLLLGLTGGLLALLVLNLAVFDDLRVDPSAGVLETFTKPQHLSSLLAVLI
Ga0190274_109005181	3300018476	Soil	MTTHQNAHTDKASGSSRRLLLGLTGALLALLILNLAVFDD
Ga0190274_118873871	3300018476	Soil	MPTHTDTRIDKPSGHPARLLLGLTSLLLALLILNLAVFDDLRIDPSAGVLETFAKPQHFASLLAVLIAVA
Ga0190271_112023782	3300018481	Soil	MPTHPKTHIDKPSGRPARLLLGLTGALLGLLILNLAVFDDLRIDP
Ga0190267_103708691	3300019767	Soil	MPTHTTSQMDKPAGRHARLLLGLTGALLALLILNLAVFDDLRIEPSAGVLETFAKPQHLSSLVAVLI
Ga0222622_113355131	3300022756	Groundwater Sediment	MPTHTSSQMDKPAGRPAGLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFTKPQHLSSLVAVL
Ga0196962_101210911	3300024430	Soil	MTTQTITHTAKTSGSFPGLLLGLTGALLALLILNLVVFDDLRTDASAG
Ga0207688_105216702	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPTHTSSQMGKSAGRAAPLLLGLTGALLALLILNLAIFDDLRIDPSA
Ga0207645_107274262	3300025907	Miscanthus Rhizosphere	MDKPARLLLGLSGALLALLILNLAVFDDLRIDPSAGVLETFA
Ga0207687_110238831	3300025927	Miscanthus Rhizosphere	MDKPAGRAARLLLLGLTGALLALLILNLAVFDDLRTDPSAG
Ga0207690_116813961	3300025932	Corn Rhizosphere	MPTHTSSQMAKSAGRAAPLLLGLTGALLALLILNLAVFDD
Ga0207709_114072631	3300025935	Miscanthus Rhizosphere	MDKPAGRAARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQHL
Ga0207670_104201211	3300025936	Switchgrass Rhizosphere	MGKSAGRAAPLLLGLTGALLALLILNLAVFDDLRI
Ga0207669_104124081	3300025937	Miscanthus Rhizosphere	MPTHTSSQMDTPAGRPARLLLALTGALLGLLILNLAVFDDLRIDPSAGVLETFAKPQHL
Ga0207704_103348303	3300025938	Miscanthus Rhizosphere	MTTHEDRHTDKTSGSPRRLLLGLTGALLALLVLNLAVFDDLRVDPSAGVLETFTKPQHLSSLVAVLIGL
Ga0207704_107068472	3300025938	Miscanthus Rhizosphere	MPTHTSSQMDTPAGRPARLLLALTGALLGLLILNLAVFDDLRIDPSAGVLETFAKPQHLSSLL
Ga0207704_107614222	3300025938	Miscanthus Rhizosphere	MTTLRTAHTDKASGSPRRLVLGLTGALLALLILNLVVFDDL
Ga0207704_109159561	3300025938	Miscanthus Rhizosphere	MPTHTNSRIDEPSGHPARLLLGLTGLLLALLILNL
Ga0207661_104531761	3300025944	Corn Rhizosphere	MPTHISSQMDKPAGRAARLLLGLTGVLLALLILNLAVFDDLRIDPSAG
Ga0207679_115453032	3300025945	Corn Rhizosphere	MTTLRTAHTDKASGSPRRLVLGLTGALLALLILNLAVFDDLRLDSSAGVL
Ga0207640_105045151	3300025981	Corn Rhizosphere	MPTHISSQMDKPAGRAARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFL
Ga0207677_111053351	3300026023	Miscanthus Rhizosphere	MPTLRTAHTDKASGSPRRLVLGLTGALLALLILNLAVFDD
Ga0207677_112602151	3300026023	Miscanthus Rhizosphere	MDKPTGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQHLASLVAVLIAGALV
Ga0207677_114381241	3300026023	Miscanthus Rhizosphere	MDKPARLLLGLSGALLALLILNLAVFDDLRIDPSAGVLETFAKPQHLASLVAVL
Ga0207703_110092811	3300026035	Switchgrass Rhizosphere	MPTHTSSQTDKPAGRGTRLLLGLTGGLLALLILNLAVFDDLRVDPSAGVLETFTKPQHLSSLVAVLIAGALIAF
Ga0207641_120534682	3300026088	Switchgrass Rhizosphere	MPTHISSQMDKPAGRAARLLLGLTGVLLALLILNLAVFDDLRIDPSAGVLETFAKPQHLSSLVAVLI
Ga0207676_120283001	3300026095	Switchgrass Rhizosphere	MDKPAGRAARLLLLGLTGALLALLILNLAVFDDLRTDPSAGVLETFTKPQHLSSLVAVLM
Ga0207674_117050352	3300026116	Corn Rhizosphere	MTTLRTAHTDKASRSPRRPVLGLTGALLALLILNLAVFDDLRLDSSAG
Ga0268266_114238512	3300028379	Switchgrass Rhizosphere	MPTHTSSQMDKPAGRAARLLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQHLSSLLAVIIAGALIAFR
Ga0247828_102343763	3300028587	Soil	MTTHEDPHTDKTSGSPRRLLLGLTGALLGLLILNLAVFDDLRLDSSAGVLETFAKPQHLA
Ga0247828_105137171	3300028587	Soil	MPTHISSQMDKPAGRAARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFTKPQHLS
Ga0247822_118934602	3300028592	Soil	MPTHTNAQSDKPFGRPSQLLLGLTGALLALLILNLAVFDDLRIDASAGFLETFTKPQHLASLVAV
Ga0247820_106070351	3300028597	Soil	MTTHRDAHTDKASGSPRRLLLGLTGALLALLILNLAVFDDLRLDASAGVLETFAKPQH
Ga0247820_111423252	3300028597	Soil	MDKPAGRAARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFTNPQH
Ga0307321_11326922	3300028704	Soil	MDKPAGRPARLLLGLTGALLTLLILNLAVFDDLRIDPSAGVLETLAKPQHLSSLVAVLIAGALVAFRHRS
Ga0307298_101472942	3300028717	Soil	MPTHTSSQMDKPSGRPARLLLGLTGALLGLLILNLAVFDDLRIDASAGVLDTFAMPQHLS
Ga0307319_102620581	3300028722	Soil	MPTHTSSQMDKPAGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAG
Ga0307297_102788802	3300028754	Soil	MPTFTALATDKPSRHPARLLLGLTGGLLALLILNLALFDDLRVDPSAGVLETFLKPQHLSSLVA
Ga0307316_101994641	3300028755	Soil	MDKPAGRPARLLLGLTGALLALLILNLAVFDDLRIDPSA
Ga0307280_101180572	3300028768	Soil	MNTHIDKPSGRPAGLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFTKPQHLAS
Ga0307299_103754371	3300028793	Soil	MDKPAGRAARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFA
Ga0247825_111786862	3300028812	Soil	MPTHTTSQMDKPTGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGALE
Ga0307302_101078573	3300028814	Soil	MSTHMNTHIDKPSGRPAGLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFTKPQHLL
Ga0307300_101314592	3300028880	Soil	MDKPAGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQHLSSLVAVVIAGALVAFR
Ga0307300_101418461	3300028880	Soil	MDKPAGRAARLLLGLTGALLALLILNLAVFDDLRIDPSAGVL
Ga0307277_105518321	3300028881	Soil	MQTHMNTHIDKPSGQPAGLLFGLTGALLALLILNLAVFDDLRIDPSAGVLETFTKPQHLSSLVAVL
Ga0247826_106206851	3300030336	Soil	MTTHEDPHTDKTSGSPRRLLLGLTGALLALLILNLAVFDDLRLDASAGVLETFAKPQHLASLV
Ga0247826_113069942	3300030336	Soil	MPTHTSPQLDKPAGRPARLLLGLTGALLALLILNLGVFDDLRVDPSAGVL
Ga0247826_116587682	3300030336	Soil	MDKPAGRPARLLLGLTGALLALLVLNLAVFDDLRIDPSAGALETFTRPQHLSSVVAVLIA
Ga0307410_116560962	3300031852	Rhizosphere	MPTHTSSQMDKPDGRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQHLSSLVAVL
Ga0307407_117073702	3300031903	Rhizosphere	MPTHRNTYIHNASRRPAGLLLGLTGALLGLLILNLAVFDDLRIDPSAGVLETFAKPQHLSSLLAVLIAAALV
Ga0308175_1004585691	3300031938	Soil	MPTQRSTHTAKPSGHPVGLLLGLTSALLALLVLNLTVFDDLR
Ga0307409_1027211372	3300031995	Rhizosphere	MPTHTDAHKDMSTARPAGLLLGLTGALLALLILNLAVFDDLRIDPSAGVV
Ga0307416_1006527161	3300032002	Rhizosphere	MRTHISSRMATPAVGRPDRLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQH
Ga0307416_1025925941	3300032002	Rhizosphere	MPTHTSAHTDKAARRPARLLLGLTGALLALLILNLAVFDDLRIDPSAGVLETFAKPQHL
Ga0307416_1036247591	3300032002	Rhizosphere	MNSTRDTHTATAAPRDTRVLLSLTGALLALLVLNLAVFDDLRIDGSAGALETFLK
Ga0307414_121255331	3300032004	Rhizosphere	MPTHMNPHIAKPSGYPAALLLGLLGALLALLILNLAVFDDLRTD
Ga0307411_112665181	3300032005	Rhizosphere	MKAETRYEHIRKPSAHPGARLLLGLTGALLTLLILNLAFFDDLRVDASAGVLETFTKPQHLSS
Ga0307411_120078341	3300032005	Rhizosphere	MSTLTSTHRDKPSGRPAGLLLALTGALLGLLILNLAVFDDLRIDSSA
Ga0326721_101371663	3300032080	Soil	MQTRRNTQIDTPAGHPTGLLLGLTGALLALLILNLAVFDDLRIDPSAG
Ga0326721_110559451	3300032080	Soil	MPTHISSQMAKPSGRPARLLLGLTGALLALLILNLAVFDDLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F034132

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences