NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F034234

Metagenome / Metatranscriptome Family F034234

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F034234
Family Type Metagenome / Metatranscriptome
Number of Sequences 175
Average Sequence Length 83 residues
Representative Sequence MQSEVIALLFPASSSPAEGATPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA
Number of Associated Samples 80
Number of Associated Scaffolds 175

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 75.88 %
% of genes near scaffold ends (potentially truncated) 32.57 %
% of genes from short scaffolds (< 2000 bps) 76.00 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (86.286 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(26.286 % of family members)
Environment Ontology (ENVO) Unclassified
(30.286 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(31.429 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.81%    β-sheet: 27.93%    Coil/Unstructured: 61.26%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 175 Family Scaffolds
PF03009GDPD 28.57
PF07885Ion_trans_2 20.00
PF03600CitMHS 12.57
PF00939Na_sulph_symp 4.00
PF02782FGGY_C 3.43
PF00370FGGY_N 3.43
PF04402SIMPL 2.29
PF02771Acyl-CoA_dh_N 0.57
PF12535Nudix_N 0.57
PF02861Clp_N 0.57
PF00561Abhydrolase_1 0.57
PF06736TMEM175 0.57
PF06808DctM 0.57
PF13469Sulfotransfer_3 0.57
PF00005ABC_tran 0.57
PF00512HisKA 0.57

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 175 Family Scaffolds
COG0584Glycerophosphoryl diester phosphodiesteraseLipid transport and metabolism [I] 28.57
COG0471Di- and tricarboxylate antiporterCarbohydrate transport and metabolism [G] 4.00
COG1055Na+/H+ antiporter NhaD or related arsenite permeaseInorganic ion transport and metabolism [P] 4.00
COG2859Outer membrane channel-forming protein BP26/OMP28, SIMPL familyCell wall/membrane/envelope biogenesis [M] 2.29
COG2968Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domainFunction unknown [S] 2.29
COG3471Predicted secreted (periplasmic) proteinFunction unknown [S] 2.29
COG0542ATP-dependent Clp protease, ATP-binding subunit ClpAPosttranslational modification, protein turnover, chaperones [O] 0.57
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.57
COG3548Uncharacterized membrane proteinFunction unknown [S] 0.57


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.29 %
UnclassifiedrootN/A13.71 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003858|Ga0031656_10018647All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales2898Open in IMG/M
3300003858|Ga0031656_10033109All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2126Open in IMG/M
3300003858|Ga0031656_10055518All Organisms → cellular organisms → Bacteria → Proteobacteria1554Open in IMG/M
3300003858|Ga0031656_10118248All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium949Open in IMG/M
3300004023|Ga0055441_10083761All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium787Open in IMG/M
3300004026|Ga0055443_10001747All Organisms → cellular organisms → Bacteria2884Open in IMG/M
3300004029|Ga0055442_10012463All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1751Open in IMG/M
3300004048|Ga0055494_10046956All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium819Open in IMG/M
3300004048|Ga0055494_10062048All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria743Open in IMG/M
3300004048|Ga0055494_10136955All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium557Open in IMG/M
3300004049|Ga0055493_10042561All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium834Open in IMG/M
3300004050|Ga0055491_10108911All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium693Open in IMG/M
3300004151|Ga0066602_10048124All Organisms → cellular organisms → Bacteria → Proteobacteria1781Open in IMG/M
3300005832|Ga0074469_10558439All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium766Open in IMG/M
3300006224|Ga0079037_100000038All Organisms → cellular organisms → Bacteria → Proteobacteria37989Open in IMG/M
3300006224|Ga0079037_100003312All Organisms → cellular organisms → Bacteria → Proteobacteria9189Open in IMG/M
3300006224|Ga0079037_100047981All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3318Open in IMG/M
3300006224|Ga0079037_100175359All Organisms → cellular organisms → Bacteria → Proteobacteria1902Open in IMG/M
3300006224|Ga0079037_100277515All Organisms → cellular organisms → Bacteria → Proteobacteria1544Open in IMG/M
3300006224|Ga0079037_100410158All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1284Open in IMG/M
3300006224|Ga0079037_100446252All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1233Open in IMG/M
3300006224|Ga0079037_100462395All Organisms → cellular organisms → Bacteria → Proteobacteria1212Open in IMG/M
3300006224|Ga0079037_100888184All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium878Open in IMG/M
3300006224|Ga0079037_101087242Not Available793Open in IMG/M
3300006224|Ga0079037_101684596All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium633Open in IMG/M
3300006930|Ga0079303_10361864Not Available609Open in IMG/M
3300009009|Ga0105105_10003919All Organisms → cellular organisms → Bacteria → Proteobacteria5917Open in IMG/M
3300009009|Ga0105105_10128399All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium1255Open in IMG/M
3300009009|Ga0105105_10776504All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium577Open in IMG/M
3300009037|Ga0105093_10045092All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1974Open in IMG/M
3300009037|Ga0105093_10168530All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1109Open in IMG/M
3300009075|Ga0105090_10001038All Organisms → cellular organisms → Bacteria → Proteobacteria14686Open in IMG/M
3300009075|Ga0105090_10007022All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria6602Open in IMG/M
3300009075|Ga0105090_10039299All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium2954Open in IMG/M
3300009075|Ga0105090_10207040All Organisms → cellular organisms → Bacteria → Proteobacteria1214Open in IMG/M
3300009075|Ga0105090_10294854All Organisms → cellular organisms → Bacteria → Proteobacteria994Open in IMG/M
3300009075|Ga0105090_10339934All Organisms → cellular organisms → Bacteria → Proteobacteria917Open in IMG/M
3300009081|Ga0105098_10014742All Organisms → cellular organisms → Bacteria2926Open in IMG/M
3300009081|Ga0105098_10339308All Organisms → cellular organisms → Bacteria → Proteobacteria731Open in IMG/M
3300009082|Ga0105099_10156977All Organisms → cellular organisms → Bacteria → Proteobacteria1284Open in IMG/M
3300009085|Ga0105103_10401787All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria759Open in IMG/M
3300009091|Ga0102851_10013407All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria5758Open in IMG/M
3300009091|Ga0102851_10191332All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1908Open in IMG/M
3300009091|Ga0102851_10932033All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium939Open in IMG/M
3300009091|Ga0102851_12043666All Organisms → cellular organisms → Bacteria → Proteobacteria650Open in IMG/M
3300009091|Ga0102851_12765932Not Available563Open in IMG/M
3300009091|Ga0102851_12869685All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium554Open in IMG/M
3300009120|Ga0117941_1000309All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria21996Open in IMG/M
3300009131|Ga0115027_10014647All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3183Open in IMG/M
3300009131|Ga0115027_10107404All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1620Open in IMG/M
3300009131|Ga0115027_10190062All Organisms → cellular organisms → Bacteria → Proteobacteria1298Open in IMG/M
3300009131|Ga0115027_10662578All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium778Open in IMG/M
3300009131|Ga0115027_10842804All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium703Open in IMG/M
3300009153|Ga0105094_10067028All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2000Open in IMG/M
3300009153|Ga0105094_10299812All Organisms → cellular organisms → Bacteria → Proteobacteria926Open in IMG/M
3300009166|Ga0105100_10277969All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1003Open in IMG/M
3300009166|Ga0105100_10311812All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium945Open in IMG/M
3300009167|Ga0113563_10000066All Organisms → cellular organisms → Bacteria → Proteobacteria33662Open in IMG/M
3300009167|Ga0113563_10080822All Organisms → cellular organisms → Bacteria2897Open in IMG/M
3300009167|Ga0113563_10215469All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1923Open in IMG/M
3300009167|Ga0113563_10349955All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1555Open in IMG/M
3300009167|Ga0113563_10815672All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1058Open in IMG/M
3300009167|Ga0113563_12126024All Organisms → cellular organisms → Bacteria → Proteobacteria673Open in IMG/M
3300009167|Ga0113563_13562621Not Available527Open in IMG/M
3300009167|Ga0113563_13957542Not Available502Open in IMG/M
3300009168|Ga0105104_10495200All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium687Open in IMG/M
3300009170|Ga0105096_10367378All Organisms → cellular organisms → Bacteria → Proteobacteria739Open in IMG/M
3300009170|Ga0105096_10660456All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium552Open in IMG/M
3300009179|Ga0115028_10011286All Organisms → cellular organisms → Bacteria3422Open in IMG/M
3300009527|Ga0114942_1082231All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1040Open in IMG/M
3300009771|Ga0116155_10378874All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium570Open in IMG/M
3300009776|Ga0116154_10249089All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium768Open in IMG/M
3300010051|Ga0133939_1018828All Organisms → cellular organisms → Bacteria → Proteobacteria18538Open in IMG/M
3300010412|Ga0136852_10000803All Organisms → cellular organisms → Bacteria → Proteobacteria33994Open in IMG/M
3300010412|Ga0136852_10019282All Organisms → cellular organisms → Bacteria → Proteobacteria7323Open in IMG/M
3300010412|Ga0136852_12323350Not Available500Open in IMG/M
(restricted) 3300013125|Ga0172369_10558741Not Available546Open in IMG/M
3300014257|Ga0075319_1065156All Organisms → cellular organisms → Bacteria → Proteobacteria683Open in IMG/M
3300014312|Ga0075345_1113260All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium623Open in IMG/M
3300014313|Ga0075347_1135778All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium582Open in IMG/M
3300020048|Ga0207193_1732469All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium648Open in IMG/M
3300021330|Ga0210363_1166347Not Available527Open in IMG/M
3300022213|Ga0224500_10242994All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria657Open in IMG/M
3300022549|Ga0212091_10213082All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium779Open in IMG/M
3300025539|Ga0210109_1019860All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1009Open in IMG/M
3300026069|Ga0208539_1036154Not Available517Open in IMG/M
3300027683|Ga0209392_1000682All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae8167Open in IMG/M
3300027683|Ga0209392_1001386All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria6273Open in IMG/M
3300027683|Ga0209392_1007182All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium3306Open in IMG/M
3300027683|Ga0209392_1017038All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium2290Open in IMG/M
3300027683|Ga0209392_1029548All Organisms → cellular organisms → Bacteria1770Open in IMG/M
3300027683|Ga0209392_1048388All Organisms → cellular organisms → Bacteria → Proteobacteria1382Open in IMG/M
3300027683|Ga0209392_1069338All Organisms → cellular organisms → Bacteria → Proteobacteria1138Open in IMG/M
3300027683|Ga0209392_1165248Not Available684Open in IMG/M
3300027683|Ga0209392_1260246All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium515Open in IMG/M
3300027693|Ga0209704_1068509All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium986Open in IMG/M
3300027713|Ga0209286_1231904All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium657Open in IMG/M
3300027719|Ga0209467_1054483All Organisms → cellular organisms → Bacteria → Proteobacteria1610Open in IMG/M
3300027721|Ga0209492_1109632All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium970Open in IMG/M
3300027726|Ga0209285_10024927All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1712Open in IMG/M
3300027739|Ga0209575_10063684All Organisms → cellular organisms → Bacteria → Proteobacteria1346Open in IMG/M
3300027762|Ga0209288_10004958All Organisms → cellular organisms → Bacteria → Proteobacteria3769Open in IMG/M
3300027762|Ga0209288_10009540All Organisms → cellular organisms → Bacteria → Proteobacteria2724Open in IMG/M
3300027796|Ga0209373_10037717All Organisms → cellular organisms → Bacteria → Proteobacteria2550Open in IMG/M
3300027871|Ga0209397_10020190All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium2069Open in IMG/M
3300027871|Ga0209397_10332114All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium733Open in IMG/M
3300027871|Ga0209397_10520776All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium592Open in IMG/M
3300027877|Ga0209293_10078056All Organisms → cellular organisms → Bacteria → Proteobacteria1444Open in IMG/M
3300027877|Ga0209293_10579097All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium592Open in IMG/M
3300027885|Ga0209450_10023103All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium3551Open in IMG/M
3300027885|Ga0209450_10115209All Organisms → cellular organisms → Bacteria → Proteobacteria1808Open in IMG/M
3300027885|Ga0209450_10208336All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1384Open in IMG/M
3300027885|Ga0209450_10267843All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1227Open in IMG/M
3300027890|Ga0209496_10239126All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium883Open in IMG/M
3300027890|Ga0209496_10429768All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium690Open in IMG/M
3300027890|Ga0209496_10446952All Organisms → cellular organisms → Bacteria → Proteobacteria678Open in IMG/M
3300027897|Ga0209254_10006705All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria10620Open in IMG/M
3300027897|Ga0209254_10139957All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium1992Open in IMG/M
3300027897|Ga0209254_10297485All Organisms → cellular organisms → Bacteria → Proteobacteria1237Open in IMG/M
3300027972|Ga0209079_10048868All Organisms → cellular organisms → Bacteria → Proteobacteria1425Open in IMG/M
3300028420|Ga0210366_10112478All Organisms → cellular organisms → Bacteria → Proteobacteria964Open in IMG/M
3300031784|Ga0315899_11499499Not Available565Open in IMG/M
3300031834|Ga0315290_10007054All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria8235Open in IMG/M
3300031873|Ga0315297_10017163All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium5108Open in IMG/M
3300032053|Ga0315284_10122212All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium3456Open in IMG/M
3300033406|Ga0316604_10007470All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria6486Open in IMG/M
3300033406|Ga0316604_10034761All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2592Open in IMG/M
3300033406|Ga0316604_10153595All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1232Open in IMG/M
3300033406|Ga0316604_10453121All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium705Open in IMG/M
3300033406|Ga0316604_10532431All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium646Open in IMG/M
3300033408|Ga0316605_10527945All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1092Open in IMG/M
3300033408|Ga0316605_10705543All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium952Open in IMG/M
3300033408|Ga0316605_10988157All Organisms → cellular organisms → Bacteria → Proteobacteria807Open in IMG/M
3300033408|Ga0316605_11541583Not Available645Open in IMG/M
3300033408|Ga0316605_11613315Not Available630Open in IMG/M
3300033408|Ga0316605_12430090Not Available509Open in IMG/M
3300033413|Ga0316603_10227101All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium1607Open in IMG/M
3300033413|Ga0316603_10558117All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1058Open in IMG/M
3300033413|Ga0316603_10916901All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium826Open in IMG/M
3300033413|Ga0316603_11285831All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium693Open in IMG/M
3300033413|Ga0316603_11292107All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria691Open in IMG/M
3300033413|Ga0316603_11928561All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium559Open in IMG/M
3300033413|Ga0316603_12132552Not Available529Open in IMG/M
3300033414|Ga0316619_10049449All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2360Open in IMG/M
3300033414|Ga0316619_10200374All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1436Open in IMG/M
3300033414|Ga0316619_10438739All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1046Open in IMG/M
3300033416|Ga0316622_101030079All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium961Open in IMG/M
3300033419|Ga0316601_100488407All Organisms → cellular organisms → Bacteria → Proteobacteria1178Open in IMG/M
3300033434|Ga0316613_10461616All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales859Open in IMG/M
3300033482|Ga0316627_100125634All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1828Open in IMG/M
3300033482|Ga0316627_100226952All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1466Open in IMG/M
3300033482|Ga0316627_100872051All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium859Open in IMG/M
3300033482|Ga0316627_101341283All Organisms → cellular organisms → Bacteria → Proteobacteria715Open in IMG/M
3300033483|Ga0316629_10182037All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1313Open in IMG/M
3300033483|Ga0316629_11752868All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium512Open in IMG/M
3300033485|Ga0316626_11064735All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium719Open in IMG/M
3300033487|Ga0316630_10889670All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium771Open in IMG/M
3300033487|Ga0316630_12100947Not Available520Open in IMG/M
3300033488|Ga0316621_10124330All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1498Open in IMG/M
3300033488|Ga0316621_10214937All Organisms → cellular organisms → Bacteria → Proteobacteria1209Open in IMG/M
3300033513|Ga0316628_102293898All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium715Open in IMG/M
3300033521|Ga0316616_100650875All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1250Open in IMG/M
3300033521|Ga0316616_101528265All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium867Open in IMG/M
3300033521|Ga0316616_104296042Not Available536Open in IMG/M
3300033521|Ga0316616_104928013Not Available502Open in IMG/M
3300033557|Ga0316617_100603543All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300033557|Ga0316617_100981190All Organisms → cellular organisms → Bacteria → Proteobacteria824Open in IMG/M
3300034053|Ga0373890_030595All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria802Open in IMG/M
3300034053|Ga0373890_031114Not Available796Open in IMG/M
3300034074|Ga0373894_039691All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium695Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil26.29%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment21.71%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands14.29%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland8.00%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment6.29%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands5.14%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.86%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater2.29%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.71%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment1.71%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry1.71%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater1.14%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.14%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge1.14%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.57%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment0.57%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.57%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.57%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.57%
Lake SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment0.57%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface0.57%
Industrial WastewaterEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Industrial Wastewater0.57%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003858Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DIEnvironmentalOpen in IMG/M
3300004023Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordA_D2EnvironmentalOpen in IMG/M
3300004026Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2EnvironmentalOpen in IMG/M
3300004029Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordB_D2EnvironmentalOpen in IMG/M
3300004048Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2EnvironmentalOpen in IMG/M
3300004049Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2EnvironmentalOpen in IMG/M
3300004050Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2EnvironmentalOpen in IMG/M
3300004151Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5EnvironmentalOpen in IMG/M
3300005832Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBBEnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006930Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWCEnvironmentalOpen in IMG/M
3300009009Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009037Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009075Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009120Lake sediment microbial communities from Tanners Lake, St. Paul, MNEnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009153Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009170Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009527Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold CreekEnvironmentalOpen in IMG/M
3300009771Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC032_MetaGEngineeredOpen in IMG/M
3300009776Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC030_MetaGEngineeredOpen in IMG/M
3300010051Industrial wastewater microbial communities from reactors of effluent treatment plant in South Killingholme, Immingham, England. Combined Assembly of Gp0151195, Gp0151196EngineeredOpen in IMG/M
3300010412Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10EnvironmentalOpen in IMG/M
3300013125 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.25mEnvironmentalOpen in IMG/M
3300014257Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D1EnvironmentalOpen in IMG/M
3300014305Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D1EnvironmentalOpen in IMG/M
3300014312Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D1EnvironmentalOpen in IMG/M
3300014313Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1EnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300021330Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.629 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022213Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300022549Cold Creek_combined assemblyEnvironmentalOpen in IMG/M
3300025539Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026069Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027683Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027693Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027713Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027719Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11 (SPAdes)EnvironmentalOpen in IMG/M
3300027721Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027726Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027739Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)EnvironmentalOpen in IMG/M
3300027762Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027796Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027890Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027897Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)EnvironmentalOpen in IMG/M
3300027972Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028420Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.641 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300033406Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CTEnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033434Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_bEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M
3300033488Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_CEnvironmentalOpen in IMG/M
3300033493Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_AEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300034053Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.3EngineeredOpen in IMG/M
3300034074Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A4A4.1EngineeredOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0031656_1001864733300003858Freshwater Lake SedimentMQSEVIALLFPAPSSSADGTTPLVTALLRDAEGLIELRHLRPDKALLRKARLAGRLNCGTPIIDPQSREIIGYEIEPIAVPAA*
Ga0031656_1003310923300003858Freshwater Lake SedimentMQSEVIALLFPASSSPAEGATPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA*
Ga0031656_1005551823300003858Freshwater Lake SedimentMQSEVIALLFPASSSPTEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA*
Ga0031656_1011824813300003858Freshwater Lake SedimentMQSEVIALLFPESHPSPEGQTPVVTALLRDAEGTMELRNLRPDKALLRAARLAGRVNSGKPIIDPHSREVIGWEIEPMALPAG*
Ga0055441_1008376113300004023Natural And Restored WetlandsPGAEGSTPLVTALLRDAQGIMELRRLRPDTSLLRKARLAGRLNCGKPILDPRTREVIGCEIEPIPLPAT*
Ga0055443_1000174723300004026Natural And Restored WetlandsMQAEVIALLFPEVEPGAEGSTPLVTALLRDAQGIMELRRLRPDTSLLRKARLAGRLNCGKPILDPRTREVIGCEIEPIPLPAT*
Ga0055442_1001246323300004029Natural And Restored WetlandsQAEVIALLFPEVEPGAEGSTPLVTALLRDAQGIMELRRLRPDTSLLRKARLAGRLNCGKPILDPRTREVIGCEIEPIPLPAT*
Ga0055494_1004695613300004048Natural And Restored WetlandsMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA*
Ga0055494_1006204823300004048Natural And Restored WetlandsMQSEVIALLFPESHPSSDGQTPVVTALLRDAQGFMELRNLRPDKALLRAARLAGRLNGGKPILDPHTREVIGYEIEPMAVPAA*
Ga0055494_1013695513300004048Natural And Restored WetlandsMDHVEEIGTALAESGRLAARSTGPAVSSEVIALLFPEQVPANEAAVPIVTALLRDAEGFMQLRSLVPDASLLRKARVAGRINRGKPIVDPATREVIGCEIEPLPDPGA*
Ga0055493_1004256113300004049Natural And Restored WetlandsMLPGLMEPDVQPEVIALLFPENAPAAVGAVPLVTALLRDAEGFMQLRHVKPDPALLRKARVAGRMNGGTPIVDPLTREVIGCEIEPITDVAR
Ga0055491_1010891113300004050Natural And Restored WetlandsMLPGLMEPDVQPEVIALLFPENAPAAVGAVPLVTALLRDAEGFMQLRHMKPDPALLRKARVAGRMNGGTPIVDPLTREVIGCEIEPITDVAR*
Ga0066602_1004812413300004151FreshwaterMQSEVIALLFPATGSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA*
Ga0074469_1055843923300005832Sediment (Intertidal)MEPDVQPEVIALLFPENAPAAVGAVPLVTALLRDAEGFMQLRHVKPDPALLRKARVAGRMNGGTPIVDPLTREVIGCEIEPITDVAR*
Ga0079037_100000038293300006224Freshwater WetlandsMQSEVIALLFPESHPSSEGPAPVVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPIIDPYTREVIGWEIEPIALPAG*
Ga0079037_100003312113300006224Freshwater WetlandsLMQPEVIALLFPEQSPATGAVVPFVTALLRDAEGLLQLRRVEPSPALLRRARLAGRLDSGKPIIDPVTREVIGCEIEPIADPAV*
Ga0079037_10004798143300006224Freshwater WetlandsMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIIDPLTREVIGYEIDPIALPAA*
Ga0079037_10017535923300006224Freshwater WetlandsVQSEVIALLFPEHGPATGGAVPFVTALLRDAEGLMQLRRVTPDASLLRKARVAGRMNKGKPIVDPVTREVIGCEIEPLADPTR*
Ga0079037_10027751523300006224Freshwater WetlandsMQSEVIALLFPAPSASADGSTPLVTALLRDAEGLMELRHLRPDKALLRKARVAGRLNCGTPIIDPQSREVIGYEIDPIAMPAT*
Ga0079037_10041015823300006224Freshwater WetlandsVSSEVIALLFPEKPSPQGGASPLVTALLRDAQGLMQLRSLVPDASLLRQARVAGRMNQGKPIVDPATREVIGCEIEPLADPAGAA*
Ga0079037_10044625223300006224Freshwater WetlandsMQSEVIALLFPESHPSSDGQTPLVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPAA*
Ga0079037_10046239513300006224Freshwater WetlandsPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPFTREVIGYEIDPITLPAA*
Ga0079037_10088818413300006224Freshwater WetlandsMQPEVIALLFPESHPSSDGQTPVVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVI
Ga0079037_10108724213300006224Freshwater WetlandsLPTEVLALLFPETSHVAGGAVPCVTALLRDAEGFMQLRRVAPDAALLRRARVAGRLNSGKPILDPVTREVIGYELELIADPAG*
Ga0079037_10168459623300006224Freshwater WetlandsMQPEVIALLFPETHPSTDGQTPVVTALLRDAQGFMELQHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPA*
Ga0079303_1036186423300006930Deep SubsurfaceMQSEVIALLFPASSSPAEGTTPLVTALVRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIIDPLKREVIGYEIDPIALPAA*
Ga0105105_1000391923300009009Freshwater SedimentMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDTALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA*
Ga0105105_1012839923300009009Freshwater SedimentMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRQARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA*
Ga0105105_1077650423300009009Freshwater SedimentMQSEVIALLFPESHPSPEGQTPVVTALLRDAQGLMELRHLRPDNALLRAARLAGRLNSGKPIIDPHTREVIGWEIEPMALPAG*
Ga0105093_1004509233300009037Freshwater SedimentMQSEVIALLFPESHPSPEGQTPVVTALLRDAQGLMELRNLRPDKALLRAARLAGRLNSGKPIIDPYTREVIGWEIEPMALPAG*
Ga0105093_1016853023300009037Freshwater SedimentMQPEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPFTREVIGYEIDPIALPAA*
Ga0105090_1000103883300009075Freshwater SedimentMLIRSVESGVSSEVIALLFPEQTPLNGGAVPFVTALLRDAEGLMELRSLAPDASLLRRARVAGRMNRGKPIVDPVTREVIGCEIEPLADPAR*
Ga0105090_1000702243300009075Freshwater SedimentMQPEVIALLFPESNSSTEGQAPVVTALLRDGEGTMEIRSLRPDRALLRAARLAGRINSGKPILDPQTREVIGYEIEPMALPAT*
Ga0105090_1003929923300009075Freshwater SedimentMQSEVIALLFPESHPSPEGPTPLVTALLRDAQGAMELRNLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPAG*
Ga0105090_1020704023300009075Freshwater SedimentMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDQALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA*
Ga0105090_1029485423300009075Freshwater SedimentVEPDVSSEVIALLFPEQGPANRGAVPLVTALLRDAQGLLGLRSLVPDASLLQQARVVGCMNRGKPILDPATREVIGCEIEPLVNPTG*
Ga0105090_1033993423300009075Freshwater SedimentMQSEVIALLFPESHPSSEGQTPIVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPIIDPNTREVIGWEIEPMTVSAG*
Ga0105098_1001474233300009081Freshwater SedimentMQSEVIALLFPETHPSPEGHAPVVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKTIIDPHTREVIGWEI
Ga0105098_1033930823300009081Freshwater SedimentMLIRSVGPGVSSEVIALLFPEQTPLNGGAVPFVTALLRDAEGLMELRSLAPDASLLRRARVAGRMNRGKPIVDPVTREVIGCEIEPLADPAR*
Ga0105099_1015697723300009082Freshwater SedimentVMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDTALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA*
Ga0105103_1040178713300009085Freshwater SedimentMQSEVIALLFPETHPSPEGHAPVVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPIIDPHTREVIGWEIEPMALPAG*
Ga0102851_1001340723300009091Freshwater WetlandsMQPEVIALLFPEQSPATGAVVPFVTALLRDAEGLLQLRRVEPSPALLRRARLAGRLDSGKPIIDPVTREVIGCEIEPIADPAV*
Ga0102851_1019133223300009091Freshwater WetlandsVQSEVIALLFPEHGPATGGAVPFVTALLRDAEGLMQLRRVTPDASLLRKARVAGRMNKGKPIVDPVTREVIGCEIEPLADPIR*
Ga0102851_1093203323300009091Freshwater WetlandsMQSEVIALLFPEQSPASGAAAPCVMALLRDAEGLMQLRSLEPNPALLRRACIAGRLNSGKPIVDPVTREVIGYELEPISVAAG*
Ga0102851_1204366623300009091Freshwater WetlandsVEPAVSSEVIALLFPEKPSPQGGASPLVTALLRDAQGLMQLCSLVPDASLLRQARVAGRMNQGTPIVDPATREVIGCEIEPLADPAG*
Ga0102851_1276593223300009091Freshwater WetlandsMQSEVLALLFPEPGQATEGSTPLVTALLRDAQGLMELQRLRPDKSLIRKARVTGRFNCGKPILDPNTREVIGWEIEPIAIPA*
Ga0102851_1286968523300009091Freshwater WetlandsVEPAVSSEVIALLFPEKPSPQGGASPLVTALLRDAQGLMQLRSLVPDASLLRQARVAGRMNQGKPIVDPATREVIGCEIEPLADPAGAA*
Ga0117941_1000309133300009120Lake SedimentVAARNLEPAVSSEVIALLFPEKSSPQGGAAPVVMALLRDAQGLMQLRSLVPDASLLREARVAGRMNRGKPILDPATREVIGCEIEPLADPAG*
Ga0115027_1001464713300009131WetlandMQPEVIALLFPEQSPATGAVVPFVTALLRDAEGLLQLRRVEPSPALLRRARLAGRLDSGKPIIDPVTREVIGCEIEPLTDPAC*
Ga0115027_1010740443300009131WetlandMQPEVIALLFPESHPSSDGQTPVVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTRE
Ga0115027_1019006223300009131WetlandVESAVQSEVIALLFPEHGPATGGAVPFVTALLRDAEGLMQLRRVTPDASLLRKARVAGRMNKGKPIVDPVTREVIGCEIEPLADPTS*
Ga0115027_1066257823300009131WetlandVIALLFPEKPSPQGGASPLVTALLRDAQGLMQLRSLVPDASLLRQVRVAGRMNQGKPIVDPATREVIGCEIEPLADPAGTA*
Ga0115027_1084280423300009131WetlandMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPFTREVIGYEIDPITLPAA*
Ga0105094_1006702833300009153Freshwater SedimentMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRQARLAGRLNCGTPIVDPLTREVIGYEID
Ga0105094_1029981223300009153Freshwater SedimentMLIRSVESGVSSEVIALLFPEQTPLNGGAVPFVTALLRDAEGLMELRSLAPDASLLRRARVAGRMNRGQPIVDPVTREVIGCEIEPLADPAR*
Ga0105100_1027796913300009166Freshwater SedimentMQSEVIALLFPASSSPAEGTTPLVTALLRYAEGLMELRHLRPDTALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA*
Ga0105100_1031181213300009166Freshwater SedimentMQSEVIALLFPETHPSPEGHAPVVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPIIDPHTREVIGWEI
Ga0113563_10000066283300009167Freshwater WetlandsMQSEVIALLFPESHPSSDGPAPVVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPIIDPYTREVIGWEIEPIALPAG*
Ga0113563_1008082233300009167Freshwater WetlandsMQSEVLALLFPEPGQATEGSTPLVTALLRDTQGLIELQRLRPDKSLIRKARVAGRFNCGKPILDPNTREVIGWEIEPIAIPA*
Ga0113563_1021546923300009167Freshwater WetlandsMQPEVIALLFPESHPSSDGQTPVVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPA*
Ga0113563_1034995523300009167Freshwater WetlandsVAARIVEPAVSSEVIALLFPEKPSPQGGASPLVTALLRDAQGLMQLRSLVPDASLLRQARVAGRMNQGKPIVDPATREVIGCEIEPLADPAGAA*
Ga0113563_1081567223300009167Freshwater WetlandsAFGTGLASKKLRISAVVWVPDMQSEVLALLFPEPSQATENSTPLVTALLRDDQGLVELRRLRPDKSLLRMARVAGRFNCGKPILDPGTREVIGYEIEPIAIPA*
Ga0113563_1212602423300009167Freshwater WetlandsEVIALLFPEKAPASAAAVPLVTALMRDAEGTIQLRRLEPSPSLLRRARVAGRMNSGTPIVDPLTREVIGYEIEPMAVPAR*
Ga0113563_1356262123300009167Freshwater WetlandsALLFPEASHVAGGAVPCVTALLRDAEGFMQLRRVAPDAALLRRARVAGRLNSGKPILDPVTREVIGYELELLADPAG*
Ga0113563_1395754213300009167Freshwater WetlandsVAARNLEPAVSSEVIALLFPEKSSLQGGPAPLVTALLRDAQGLMQLRSLVPDASLLRQARVAGRMNRGKPIVDPATREVICCEI
Ga0105104_1049520013300009168Freshwater SedimentMQSEVIALLFPESHPSPEGPTPLVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPIIDPNTREVIGWEIEPMTVSAG*
Ga0105096_1036737823300009170Freshwater SedimentIALLFPASSSPTEGTTPLVTALLRDAEGLMELRHLRPDQALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA*
Ga0105096_1066045613300009170Freshwater SedimentVSSEVIALLFPEKTSPQGGAAPLVTALLRDAQGLMQLRSLVPDASLLRQARVAGRMNRGKPIVDPATREVI
Ga0115028_1001128633300009179WetlandMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDRALLRRARLAGRLNCGTPIIDPLTREVIGYEIDPIALPAA*
Ga0114942_108223123300009527GroundwaterMHSEVIALLFPESHPSSEGQTPVVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPIIDPNTREVIGWEIEPMTVPAG*
Ga0116155_1037887423300009771Anaerobic Digestor SludgeMQSEVIALLFPASGSLAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIIDPFTREV
Ga0116154_1024908913300009776Anaerobic Digestor SludgeMQSEVIALLFPASGSLAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIIDPFTREVIGYEIDPIALPAA*
Ga0133939_101882853300010051Industrial WastewaterVAARYLEPGVSSEVIALLFPEMSSPPGGAAPMVMALLRDAQGLMQLRSLVPDASLLRQARVAGRMNRGKPILDPATREVIGCEIEPLPDPTG*
Ga0136852_10000803193300010412Mangrove SedimentMFAAFRAGGLRQVSRLAMKSEIIALLFPESHAAVEGARPVVTALLRDDQGLMELRNMAADTAVFRAARLAGRLNRGKPILDPHTREVIGYEIDPIAVPTG*
Ga0136852_1001928243300010412Mangrove SedimentMELDVQPEVIALLFPENAPAAAGAVPLVTALLRDAEGFMQLRHLKPDPALLRRARVAGRMNGGKPIVDPLTREVIGCEIEPITDVAR*
Ga0136852_1232335023300010412Mangrove SedimentMEPDVQPEVIALLFPENAPAAVGAVPLVTALLRDAEGFMQLRHLKPDPTLLRKALVAGRINGGKPIVDPFTREVIGCEIEPITDVAR*
(restricted) Ga0172369_1055874113300013125FreshwaterLTTEVPQSMPSEIIALLFPEPAQAVDGSVLFVTALLRDAEGTMELRHLRPDRNLIGRARIAGRFNNGTPIVDPQTREVIGYEIEPIAVASG*
Ga0075319_106515613300014257Natural And Restored WetlandsPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA*
Ga0075349_102810913300014305Natural And Restored WetlandsNAPAAVGAVPLVTALLRDAEGFMQLRHMKPDPALLRKARVAGRMNGGTPIVDPLTREVIGCEIEPITDVAR*
Ga0075345_111326023300014312Natural And Restored WetlandsPESHPSSDGQTPVVTALLRDAQGFMELRNLRPDKALLRAARLAGRLNGGKPILDPHTREVIGYEIEPMAVPAA*
Ga0075347_113577823300014313Natural And Restored WetlandsEVTRSQMQSEVIALLFPESHGSPEGQTPLVTALLRDAEGLMELRNLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPAA*
Ga0207193_173246913300020048Freshwater Lake SedimentMQSEVIALLFPESHPSPEGQTPVVTALLRDAQGLMELRHLRPDNALLRAARLAGRLNSGKPIIDPHTREVIGWEIE
Ga0210363_116634713300021330EstuarineMQAEVIALLFPEVEPGAEGSTPLVTALLRDAQGIMELRRLRPDTSLLRKARLAGRLNCGKPILDPRTREVIGCEIEPIPLPAT
Ga0224500_1024299423300022213SedimentMQSEVIALLFPESHPSSDGQTPVVTALLRDAQGFMELRNLRPDKALLRAARLAGRLNGGKPILDPHTREVIGYEIEPMAVPAA
Ga0212091_1021308223300022549GroundwaterMHSEVIALLFPESHPSSEGQTPVVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPIIDPNTREVIGWEIEPMTVPAG
Ga0210109_101986023300025539Natural And Restored WetlandsPGAEGSTPLVTALLRDAQGIMELRRLRPDTSLLRKARLAGRLNCGKPILDPRTREVIGCEIEPIPLPAT
Ga0208539_103615413300026069Natural And Restored WetlandsMQSEVIALLFPAPSSSADGSTPLVTALLRDAEGLMELRNLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPAA
Ga0209392_100068233300027683Freshwater SedimentMQSEVIALLFPESHPSSEGQTPIVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPIIDPNTREVIGWEIEPMTVSAG
Ga0209392_100138653300027683Freshwater SedimentMQPEVIALLFPESNSSTEGQAPVVTALLRDGEGTMEIRSLRPDRALLRAARLAGRINSGKPILDPQTREVIGYEIEPMALPAT
Ga0209392_100718223300027683Freshwater SedimentMQSEVIALLFPESHPSPEGQTPVVTALLRDAQGLMELRNLRPDKALLRAARLAGRLNSGKPIIDPYTREVIGWEIEPMALPAG
Ga0209392_101703823300027683Freshwater SedimentMQSEVIALLFPESHPSPEGPTPLVTALLRDAQGAMELRNLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPAG
Ga0209392_102954823300027683Freshwater SedimentMQSEVIALLFPETHPSPEGHAPVVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPIIDPHTREVIGWEIEPMALPAG
Ga0209392_104838823300027683Freshwater SedimentVQSEVIALLFPEQGPVSGGAVPFVTALLRDAEGLMQLRRVAPDASLLRKARVAGRMNTGKPIVDPVTREVIGCEIEPLADPVR
Ga0209392_106933823300027683Freshwater SedimentMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDQALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA
Ga0209392_116524823300027683Freshwater SedimentMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRQARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA
Ga0209392_126024613300027683Freshwater SedimentMALAPSGGVAARNVESGVSSEVIALLFPEKTSPQGGAAPLVTALLRDAQGLMQLRSLVPDASLLRQARVAGRMNRGKPIVDPATREVI
Ga0209704_106850913300027693Freshwater SedimentLLFPESHPSPEGPTPLVTALLRDAQGAMELRNLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPAG
Ga0209286_123190413300027713Freshwater SedimentMQPEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPFTREVIGYEIDPIALPAA
Ga0209467_105448333300027719FreshwaterLFPASGSAAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA
Ga0209492_110963213300027721Freshwater SedimentMQPEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPFTREV
Ga0209285_1002492723300027726Freshwater SedimentMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDTALLRKARLAGRLNCGTPIVDPFTREVIGYEIDPIALPAA
Ga0209575_1006368413300027739FreshwaterLLFPATGSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA
Ga0209288_1000495833300027762Freshwater SedimentMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDTALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA
Ga0209288_1000954033300027762Freshwater SedimentVSPEVIALLFPEKAPANGAAAPLAMALLRDAEGLMQLRSIAPDAALLRAARVAGCMNCGTPIVDPATREVIGYEIEPLADPAR
Ga0209373_1003771723300027796FreshwaterMQSEVIALLFPATGSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA
Ga0209397_1002019023300027871WetlandMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIIDPLTREVIGYEIDPIALPAA
Ga0209397_1033211423300027871WetlandMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPFTREVIGY
Ga0209397_1052077613300027871WetlandVQSEVIALLFPEHGPATGGAVPFVTALLRDAEGLMQLRRVTPDASLLRKARVAGRMNKGKPIVDPVTREVIGCEIEPLADPTR
Ga0209293_1007805623300027877WetlandMQPEVIALLFPEQSPATGAVVPFVTALLRDAEGLLQLRRVEPSPALLRRARLAGRLDSGKPIIDPVTREVIGCEIEPIADPAV
Ga0209293_1057909723300027877WetlandVSSEVIALLFPEKPSPQGGASPLVTALLRDAQGLMQLRSLVPDASLLRQARVAGRMNQGKPIVDPATREVIGCEIEPLADPAGAA
Ga0209450_1002310323300027885Freshwater Lake SedimentMQSEVIALLFPAPSSSADGTTPLVTALLRDAEGLIELRHLRPDKALLRKARLAGRLNCGTPIIDPQSREIIGYEIEPIAVPAA
Ga0209450_1011520933300027885Freshwater Lake SedimentMEHEVVALLYPESPPAFEGAVPMVTALLRDAQGFMELRRLRPDTALLRAARVAGRMNSGKPIVDPHTREVIGYEIE
Ga0209450_1020833623300027885Freshwater Lake SedimentMQPEVIALLFPEQAPVAGGMVPFVVALMRNAEGLMELRRVTPDASLLSTARVAGRMNKGKPIVDPVTREVIGCEIEPLVDSAR
Ga0209450_1026784323300027885Freshwater Lake SedimentMQSEVIALLFPASSSPAEGATPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA
Ga0209496_1023912623300027890WetlandMQSEVIALLFPAPSASADGSTPLVTALLRDAEGLMELRHLRPDTALLRKARVAGRLNCGTPIIDPQSREVIGYEIDPIAMPAT
Ga0209496_1042976813300027890WetlandMQPEVIALLFPESHPSSDGQTPVVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPA
Ga0209496_1044695223300027890WetlandLSAARGGVKTLMQPEVIALLFPEQSPATGAVVPFVTALLRDAEGLLQLRRVEPSPALLRRARLAGRLDSGKPIIDPVTREVIGCEIEPIADPAV
Ga0209254_1000670553300027897Freshwater Lake SedimentMQSEVIALLFPESHPSPEGQTPVVTALLRDAEGTMELRNLRPDKALLRAARLAGRVNSGKPIIDPHSREVIGWEIEPMALPAG
Ga0209254_1013995723300027897Freshwater Lake SedimentMQPEVIALLFPETPPTATDPSPIVTALMRGPEGLIELRRLRPDKALLRAARLAGRMNSGKPIVDPHTREVIGYEIEPMVLPAG
Ga0209254_1029748523300027897Freshwater Lake SedimentMQSEVIALLFPASSSPTEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA
Ga0209079_1004886823300027972Freshwater SedimentMLIRSVESGVSSEVIALLFPEQTPLNGGAVPFVTALLRDAEGLMELRSLAPDASLLRRARVAGRMNRGKPIVDPVTREVIGCEIEPLADPAR
Ga0210366_1011247823300028420EstuarineMQAEVIALLFPEVEPGAEGSTPLVTALLRDAQGIMELRRLRPDTSLLRKARLAGRLNCGKPILDPRTREVIGWEIEPIPLPAT
Ga0315899_1149949913300031784FreshwaterFAMQSEVIALLFPASSSPTEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPLTREVIGYEIDPIALPAA
Ga0315290_1000705443300031834SedimentMQPEIIALLFPEPAPAAEGPALLVTALLRDAQGMMELRHLRPDKNLIRRARVAGRFNSGKPIFDPQTREVIGYEIEPIADGTS
Ga0315297_1001716323300031873SedimentVSLEFRIEVFVSMQPEIIALLFPEPAPAAEGPALLVTALLRDAQGMMELRHLRPDKNLIRRARVAGRFNSGKPIFDPQTREVIGYEIEPIADGTS
Ga0315284_1012221223300032053SedimentVSLEFRIEVFVSMQPEIIALLFPEPAPAAEGPALLVTALLRDAQGMMELRHLRPDKNLIRRARVAGRFNSGKPIFDPQTREVIGYEIEPIADGSS
Ga0316604_1000747043300033406SoilMQSEVIALLFPESHPSSEGPAPVVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPIIDPYTREVIGWEIEPIALPAG
Ga0316604_1003476133300033406SoilMQSEVIALLFPAPSASADGSTPLVTALLRDAEGLMELRHLRPDKALLRKARVAGRLNCGTPIIDPQSREVIGYEIDPIAMPAT
Ga0316604_1015359523300033406SoilMQSEVIALLFPAPSSPADGSTPLVTALLRDAEGLMELRHLRPDKALLRKARVAGRLNCGTPIIDPQSREVIGYEIDPIAVAAT
Ga0316604_1025828913300033406SoilTAGAVPFVTALLRDAEGLMQLRRVTPDPSLLRKARVAGRMNKGKPIVDPVTREVIGCEIEPLADPTR
Ga0316604_1045312123300033406SoilMQPEVIALLFPESHPSTDGQTPVVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAIPA
Ga0316604_1053243113300033406SoilTAAVGMALARSGRVAARIVEPAVSSEVIALLFPEKPSPQGGASPLVTALLRDAQGLMQLRSLVPDASLLRQARVAGRMNQGKPIVDPATREVIGCEIEPLADPAGAA
Ga0316605_1052794523300033408SoilMQSEVIALLFPESHPSSDGQTPLVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVP
Ga0316605_1070554313300033408SoilVQHWHDACCCFGRSLREVERSAMQSEVIALLFPESHPSNDGQTPVVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPILDPQTREVIGYEIEPIALPAA
Ga0316605_1098815713300033408SoilQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIIDPLTREVIGYEIDPIALPAA
Ga0316605_1133471213300033408SoilEHGPATAGAVPFVTALLRDAEGLMQLRRVTPDPSLLRKARVAGRMNKGKPIVDPVTREVIGCEIEPLADPAR
Ga0316605_1154158313300033408SoilMQSEVIALLFPASSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPFTREVIGYEIDPITLPAA
Ga0316605_1161331513300033408SoilMQPEVIALLFPESHASSDGQTPVVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPA
Ga0316605_1243009013300033408SoilPPREASRFAMQSEVIALLFPAPSASADGSTPLVTALLRDAEGLMELRHLRPDKALLRKARVAGRLNCGTPIIDPQSREVIGYEIDPIAMPAT
Ga0316603_1022710133300033413SoilVQSEVIALLFPEHGPATGGAVPFVTALLRDAEGLMQLRRVTPDASLLRKARVAGRMNKGKPIVDPVTREVIGCEIEPLADPIR
Ga0316603_1055811723300033413SoilMHSEVIALLFPAPSSSADGSTPLVTALLRDAEGLMELRHLRPDKALLRKARVAGRLNCGTPIIDPQSREVIGYEIDPIAVTAT
Ga0316603_1091690123300033413SoilMVWVPDMQSEVLALLFPEPSQATENSTPLVTALLRDDQGLVELRRLRPDKSLLRMARVAGRFNCGKPILDPGTREVIGYE
Ga0316603_1128583123300033413SoilMQSEVIALLFPESHPSNDGQTPVVTALLRDAEGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPAA
Ga0316603_1129210723300033413SoilMQSEVIALLFPESHPSSDGQTPLVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPAA
Ga0316603_1192856123300033413SoilIALLFPESHPSSDGQTTVVTALLRDEQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPAA
Ga0316603_1213255213300033413SoilMQSEVIALLFPAPSSPADGSTPLVTALLRDSEGLMELRHLRPDTALLRKARVAGRLNCGTPIIDPQSREVIGYEIDPIAVAAT
Ga0316603_1216957713300033413SoilATAGAVPFVTALLRDAEGLMQLRRVTPDPSLLRKARVAGRMNKGKPIVDPVTREVIGCEIEPLADPAR
Ga0316619_1004944913300033414SoilTFLSAARGGVKTLMQPEVIALLFPEQSPATGAVVPFVTALLRDAEGLLQLRRVEPSPALLRRARLAGRLDSGKPIIDPVTREVIGCEIEPIADPAV
Ga0316619_1020037413300033414SoilLLFPESHPSSDGQTPVVTALLRDAQGFMELRHLRLDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPAA
Ga0316619_1043873923300033414SoilMQPEVIALLFPESHPSTDGQTPVVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPA
Ga0316622_10103007923300033416SoilMQSEVLALLFPEPGQATEGSTPLVTALLRDTQGLIELQRLRPDKSLIRKARVAGRFNCGKPILDPNTREVIGWEIEPIAIPA
Ga0316601_10048840723300033419SoilALLFPAPSASADGSTPLVTALLRDAEGLMELRHLRPDKALLRKARVAGRLNCGTPIIDPQSREVIGYEIDPIAMPAT
Ga0316613_1046161623300033434SoilMQSEVIALLFPESHPSSDGQTPVVTALLRDDQGFMELRNLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAIPAA
Ga0316627_10012563433300033482SoilMQSEVIALLFPESHPSSDGQTPVVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNGGKPILDPHTREVIGYEIEPMAVPAA
Ga0316627_10022695223300033482SoilMQSEVIALLFPEPCQAPEGPAPLVTALLRDAEGLMRVCSLRPDRALLRAARLAGRFNCGTPIVDPLTREVIGCEIEPIAVG
Ga0316627_10087205113300033482SoilPSSDGQAPVVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPAA
Ga0316627_10134128313300033482SoilLLFPEKSSPQGGAAILVTALLRDAQGLMELRSLVPDASLLRQARVAGRMNRGKPIVDPATREVIGCEIEPLADPAG
Ga0316629_1018203723300033483SoilMQSEVIALLFPESHPSSEGPAPVVTALLRDAQGLMELRHLRPDKALLRAARLAGRLNSGKPIIDPYTREVIGW
Ga0316629_1175286813300033483SoilVSSEVIALLFPEKPSPQGGASPLVTALLRDAQGLMQLRSLVPDASLLRQARVAGRMNQGKPIVDPATREVIGCEIEPLADPA
Ga0316626_1106473513300033485SoilMQSEVIALLFPEERPSAEGVTPLVTALIRDAQGFMELRHLRPDKALLRAARIAGRLKSGKPIVDPHTREVIGYE
Ga0316630_1088967013300033487SoilALKKLRISAMVWVPDMQSEVLALLFPEPSQATENSTPLVTALLRDDQGLVELRRLRPDKSLLRMARVAGRFNCGKPILDPGTREVIGYEIEPIAIPA
Ga0316630_1210094713300033487SoilQSEVIALLFPEHGPATGGAVPFVTALLRDAEGLMQLRRVTPDASLLRKARVAGRMNKGKPIVDPVTREVIGCEIEPLADPTR
Ga0316621_1012433013300033488SoilMNPEVIALLYPESHTSTEGKSPVVTALLRDSQGTMEVRNLSPDTAIMRAARLAGRLNRGKPIVDPHTREVI
Ga0316621_1021493723300033488SoilMQSEVIALLFPAPSSSADGSTPLVTALLRDAEGLMELRHLRPDKALLRKARVAGRLNCGTPIIDPQSREVIGYEIDPIAMPAT
Ga0316631_1038266313300033493SoilMQPEVIALLFPEQSPATGAVVPFVTALLRDAEGLLQLRRVEPSPALLRRARLAGRLDSGKPIIDPVTREV
Ga0316628_10229389823300033513SoilMQSEVIALLFPESHPSSDGQTPVVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPA
Ga0316616_10065087523300033521SoilMQPEVIALLFPESHPSSDGQTPVVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPAA
Ga0316616_10152826523300033521SoilVPAVSSEVIALLFPEKPSPQGGASPLVTALLRDAQGLMQLRSLVPDASLLRQARVAGRMNQGKPIVDPATREVIGCEIEPLADPAGTA
Ga0316616_10429604223300033521SoilMQPEVIALLFPETHPSTDGQTPVVTALLRDAQGFMELQHLRPDKALLRAARLAGRLNSGKPILDPHT
Ga0316616_10492801313300033521SoilMQSEVIALLFPESHPSSDGQTPLVTALLRDAQGFMELRHLRPDKALLRAARLAGRLNSGKPILDPHTREVIG
Ga0316617_10060354323300033557SoilMQPEVIALLFPETHPSTDGQTPVVTALLRDAQGFMELQHLRPDKALLRAARLAGRLNSGKPILDPHTREVIGYEIEPMAVPA
Ga0316617_10098119023300033557SoilAWGVKPLMQPEVIALLFPEQSPATGAVVPFVTALLRDAEGLLQLRRVEPSPALLRRARLAGRLDSGKPIIDPVTREVIGCEIEPIADPAV
Ga0373890_030595_145_3963300034053Sediment SlurryMQSEVIALLFPATSSPAEGTTPLVTALLRDAEGLMELRHLRPDKALLRKARLAGRLNCGTPIVDPRTREVIGYEIDPIALPAA
Ga0373890_031114_305_5833300034053Sediment SlurryVAAKNVELAVSSEVIALLFPEKSSAQGGAATLVTALLRDAQGLMELRSLVPDASLLSQARVAGRMNRGKPIVDPATREVIGCEIEPLTDLAC
Ga0373894_039691_243_5003300034074Sediment SlurryMQSEVIALLFPASSSPSEGATPLVTALLRDAEGIMELRHLRPDKALLRKARVAGRLNCGTPIVDPLTREVIGYEIDPITLPAVCA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.