Metagenome Family F034501

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F034501
Family Type	Metagenome
Number of Sequences	174
Average Sequence Length	77 residues
Representative Sequence	MHDTYKQDYLAQAERHIAIAEDRIARQKRIIDELVQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKN
Number of Associated Samples	108
Number of Associated Scaffolds	174

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	57.47 %
% of genes near scaffold ends (potentially truncated)	44.83 %
% of genes from short scaffolds (< 2000 bps)	94.83 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.023 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (20.690 % of family members)
Environment Ontology (ENVO)	Unclassified (40.805 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.092 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.65% β-sheet: 0.00% Coil/Unstructured: 35.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.24.14.1: FAT domain of focal adhesion kinase	d1k04a_	1k04	0.89214
a.238.1.3: IMD domain	d1y2oa1	1y2o	0.88512
a.47.1.1: STAT	d1bg1a1	1bg1	0.87296
d.320.1.1: YojJ-like	d2fb5a1	2fb5	0.87277
a.238.1.0: automated matches	d3ok8a_	3ok8	0.86895

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 174 Family Scaffolds
PF03976	PPK2	17.24
PF12616	DUF3775	5.17
PF04972	BON	5.17
PF00582	Usp	4.60
PF03633	Glyco_hydro_65C	4.02
PF05598	DUF772	1.72
PF13439	Glyco_transf_4	1.15
PF03636	Glyco_hydro_65N	1.15
PF02308	MgtC	1.15
PF00274	Glycolytic	1.15
PF10025	DUF2267	0.57
PF07167	PhaC_N	0.57
PF00873	ACR_tran	0.57
PF07369	DUF1488	0.57
PF00534	Glycos_transf_1	0.57
PF02737	3HCDH_N	0.57
PF03632	Glyco_hydro_65m	0.57
PF12848	ABC_tran_Xtn	0.57
PF08323	Glyco_transf_5	0.57

COG ID	Name	Functional Category	% Frequency in 174 Family Scaffolds
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	17.24
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	5.75
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	1.15
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	1.15
COG3588	Fructose-bisphosphate aldolase class 1	Carbohydrate transport and metabolism [G]	1.15
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.57
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.57
COG0297	Glycogen synthase	Carbohydrate transport and metabolism [G]	0.57
COG0438	Glycosyltransferase involved in cell wall bisynthesis	Cell wall/membrane/envelope biogenesis [M]	0.57
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.57
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.57
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.57
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.57
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.57
COG3243	Poly-beta-hydroxybutyrate synthase	Lipid transport and metabolism [I]	0.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.02 %
All Organisms	root	All Organisms	45.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.02 %
cellular organisms	root	All Organisms → cellular organisms	45.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.02 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.54 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.02 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.72 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.57 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.02 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.72 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.15 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.57 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.02 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	1.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.72 %
Candidatus Afipia apatlaquensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Candidatus Afipia apatlaquensis	1.15 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.57 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.57 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.02 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	1.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.72 %
Candidatus Afipia apatlaquensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Candidatus Afipia apatlaquensis	1.15 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.57 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.57 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c1000482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	718	Open in IMG/M
2228664022\|INPgaii200_c1143348	Not Available	514	Open in IMG/M
2228664022\|INPgaii200_c1143948	Not Available	634	Open in IMG/M
3300000684\|JGI12337J11877_100999	Not Available	570	Open in IMG/M
3300000699\|JGI12536J11923_103609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	543	Open in IMG/M
3300000715\|JGI12409J11926_104063	Not Available	578	Open in IMG/M
3300000890\|JGI11643J12802_10801151	All Organisms → cellular organisms → Bacteria → Proteobacteria	1584	Open in IMG/M
3300000955\|JGI1027J12803_101199093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	933	Open in IMG/M
3300000955\|JGI1027J12803_101884654	Not Available	512	Open in IMG/M
3300000956\|JGI10216J12902_101833712	Not Available	1370	Open in IMG/M
3300000956\|JGI10216J12902_108045857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2553	Open in IMG/M
3300000956\|JGI10216J12902_108408673	Not Available	625	Open in IMG/M
3300004081\|Ga0063454_101937366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300004643\|Ga0062591_102508415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	542	Open in IMG/M
3300005181\|Ga0066678_10501124	Not Available	807	Open in IMG/M
3300005328\|Ga0070676_11311070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	553	Open in IMG/M
3300005332\|Ga0066388_100046634	All Organisms → cellular organisms → Bacteria	4380	Open in IMG/M
3300005332\|Ga0066388_100600442	Not Available	1723	Open in IMG/M
3300005332\|Ga0066388_100700805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1619	Open in IMG/M
3300005332\|Ga0066388_101070106	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300005332\|Ga0066388_102184705	Not Available	998	Open in IMG/M
3300005332\|Ga0066388_102478088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	942	Open in IMG/M
3300005332\|Ga0066388_102627644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	917	Open in IMG/M
3300005332\|Ga0066388_105608043	Not Available	635	Open in IMG/M
3300005332\|Ga0066388_105665263	Not Available	632	Open in IMG/M
3300005332\|Ga0066388_106075854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300005332\|Ga0066388_107745696	Not Available	538	Open in IMG/M
3300005332\|Ga0066388_107897800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	532	Open in IMG/M
3300005439\|Ga0070711_101904232	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300005764\|Ga0066903_100546446	Not Available	1984	Open in IMG/M
3300005764\|Ga0066903_100685512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1802	Open in IMG/M
3300005764\|Ga0066903_101166049	All Organisms → cellular organisms → Bacteria → Proteobacteria	1427	Open in IMG/M
3300005764\|Ga0066903_101249500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1383	Open in IMG/M
3300005764\|Ga0066903_101380051	Not Available	1322	Open in IMG/M
3300005764\|Ga0066903_101556100	Not Available	1251	Open in IMG/M
3300005764\|Ga0066903_101658783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1215	Open in IMG/M
3300005764\|Ga0066903_101706705	Not Available	1199	Open in IMG/M
3300005764\|Ga0066903_101906597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1138	Open in IMG/M
3300005764\|Ga0066903_102080439	Not Available	1092	Open in IMG/M
3300005764\|Ga0066903_102705007	All Organisms → cellular organisms → Bacteria → Proteobacteria	962	Open in IMG/M
3300005764\|Ga0066903_102909969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	928	Open in IMG/M
3300005764\|Ga0066903_105230368	Not Available	686	Open in IMG/M
3300005764\|Ga0066903_105849153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	645	Open in IMG/M
3300005764\|Ga0066903_106026619	Not Available	635	Open in IMG/M
3300005764\|Ga0066903_108662840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	517	Open in IMG/M
3300006038\|Ga0075365_10193511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1424	Open in IMG/M
3300006038\|Ga0075365_10575493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	797	Open in IMG/M
3300006844\|Ga0075428_100276231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1808	Open in IMG/M
3300009100\|Ga0075418_12733266	Not Available	539	Open in IMG/M
3300009100\|Ga0075418_12968222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	517	Open in IMG/M
3300009137\|Ga0066709_102382018	Not Available	721	Open in IMG/M
3300009147\|Ga0114129_12286243	Not Available	649	Open in IMG/M
3300009147\|Ga0114129_12869895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	571	Open in IMG/M
3300009156\|Ga0111538_11299908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	918	Open in IMG/M
3300009792\|Ga0126374_10856607	Not Available	700	Open in IMG/M
3300009792\|Ga0126374_11199059	Not Available	608	Open in IMG/M
3300010043\|Ga0126380_10500643	Not Available	932	Open in IMG/M
3300010046\|Ga0126384_10927562	Not Available	788	Open in IMG/M
3300010048\|Ga0126373_11020185	Not Available	893	Open in IMG/M
3300010048\|Ga0126373_12285086	Not Available	601	Open in IMG/M
3300010358\|Ga0126370_10438631	Not Available	1085	Open in IMG/M
3300010358\|Ga0126370_12198082	Not Available	544	Open in IMG/M
3300010360\|Ga0126372_10701966	Not Available	988	Open in IMG/M
3300010360\|Ga0126372_12271883	Not Available	592	Open in IMG/M
3300010361\|Ga0126378_10526363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1297	Open in IMG/M
3300010361\|Ga0126378_11279166	Not Available	829	Open in IMG/M
3300010361\|Ga0126378_11583636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	744	Open in IMG/M
3300010361\|Ga0126378_12559400	Not Available	583	Open in IMG/M
3300010361\|Ga0126378_12761394	Not Available	561	Open in IMG/M
3300010362\|Ga0126377_10844100	Not Available	976	Open in IMG/M
3300010366\|Ga0126379_11754240	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300010375\|Ga0105239_13526326	Not Available	508	Open in IMG/M
3300010376\|Ga0126381_101143966	Not Available	1124	Open in IMG/M
3300010376\|Ga0126381_102072030	Not Available	819	Open in IMG/M
3300010376\|Ga0126381_102558919	Not Available	731	Open in IMG/M
3300010376\|Ga0126381_104466764	Not Available	540	Open in IMG/M
3300010398\|Ga0126383_11371464	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300010398\|Ga0126383_12011284	Not Available	665	Open in IMG/M
3300010399\|Ga0134127_11685658	Not Available	709	Open in IMG/M
3300011000\|Ga0138513_100014657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1025	Open in IMG/M
3300012211\|Ga0137377_11794902	Not Available	533	Open in IMG/M
3300012948\|Ga0126375_10557627	Not Available	866	Open in IMG/M
3300012955\|Ga0164298_10773065	Not Available	683	Open in IMG/M
3300012955\|Ga0164298_11675079	Not Available	504	Open in IMG/M
3300012971\|Ga0126369_11324034	Not Available	810	Open in IMG/M
3300012971\|Ga0126369_11518899	Not Available	759	Open in IMG/M
3300012971\|Ga0126369_11660145	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300012971\|Ga0126369_12759698	Not Available	575	Open in IMG/M
3300014325\|Ga0163163_10820353	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300015371\|Ga0132258_13666733	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300015371\|Ga0132258_13937973	Not Available	1009	Open in IMG/M
3300015372\|Ga0132256_101086270	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300015373\|Ga0132257_102292541	Not Available	700	Open in IMG/M
3300016294\|Ga0182041_10346335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1247	Open in IMG/M
3300016294\|Ga0182041_10462717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1092	Open in IMG/M
3300016319\|Ga0182033_10862628	Not Available	800	Open in IMG/M
3300016319\|Ga0182033_12170975	Not Available	507	Open in IMG/M
3300016341\|Ga0182035_11674473	Not Available	574	Open in IMG/M
3300016357\|Ga0182032_10698702	Not Available	851	Open in IMG/M
3300016387\|Ga0182040_10108082	Not Available	1903	Open in IMG/M
3300016387\|Ga0182040_11009514	Not Available	694	Open in IMG/M
3300016422\|Ga0182039_11296663	Not Available	660	Open in IMG/M
3300018028\|Ga0184608_10186436	All Organisms → cellular organisms → Bacteria → Proteobacteria	906	Open in IMG/M
3300018054\|Ga0184621_10049220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1403	Open in IMG/M
3300018072\|Ga0184635_10232490	Not Available	732	Open in IMG/M
3300018073\|Ga0184624_10115482	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300018074\|Ga0184640_10354514	Not Available	665	Open in IMG/M
3300018081\|Ga0184625_10627087	Not Available	524	Open in IMG/M
3300018082\|Ga0184639_10264395	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300018469\|Ga0190270_12931056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300021361\|Ga0213872_10109813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1226	Open in IMG/M
3300021439\|Ga0213879_10068341	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300021444\|Ga0213878_10096648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1195	Open in IMG/M
3300021560\|Ga0126371_10836809	Not Available	1066	Open in IMG/M
3300021560\|Ga0126371_10862722	Not Available	1050	Open in IMG/M
3300021560\|Ga0126371_10883516	Not Available	1038	Open in IMG/M
3300021560\|Ga0126371_11137647	Not Available	919	Open in IMG/M
3300021560\|Ga0126371_13034487	Not Available	568	Open in IMG/M
3300026783\|Ga0207778_104160	Not Available	1053	Open in IMG/M
3300026809\|Ga0207820_100958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3251	Open in IMG/M
3300026831\|Ga0207738_117065	Not Available	663	Open in IMG/M
3300026947\|Ga0207853_1031217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	751	Open in IMG/M
3300026953\|Ga0207835_1047166	Not Available	536	Open in IMG/M
3300027909\|Ga0209382_10695703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1094	Open in IMG/M
3300027915\|Ga0209069_10274467	Not Available	886	Open in IMG/M
3300028710\|Ga0307322_10081532	Not Available	817	Open in IMG/M
3300028755\|Ga0307316_10100716	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300028768\|Ga0307280_10172946	Not Available	754	Open in IMG/M
3300028784\|Ga0307282_10175735	Not Available	1020	Open in IMG/M
3300028793\|Ga0307299_10225582	Not Available	704	Open in IMG/M
3300028802\|Ga0307503_10614208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300028872\|Ga0307314_10107607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	768	Open in IMG/M
3300028880\|Ga0307300_10333090	Not Available	520	Open in IMG/M
3300028884\|Ga0307308_10225008	Not Available	899	Open in IMG/M
3300031446\|Ga0170820_17302146	Not Available	1109	Open in IMG/M
3300031469\|Ga0170819_12028050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2532	Open in IMG/M
3300031543\|Ga0318516_10000202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16127	Open in IMG/M
3300031545\|Ga0318541_10087802	Not Available	1654	Open in IMG/M
3300031545\|Ga0318541_10228416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1032	Open in IMG/M
3300031573\|Ga0310915_10366317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Candidatus Afipia apatlaquensis	1022	Open in IMG/M
3300031573\|Ga0310915_10636988	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300031719\|Ga0306917_10844312	Not Available	717	Open in IMG/M
3300031723\|Ga0318493_10087354	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300031751\|Ga0318494_10630125	Not Available	627	Open in IMG/M
3300031771\|Ga0318546_10321322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1074	Open in IMG/M
3300031781\|Ga0318547_10500595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Candidatus Afipia apatlaquensis	750	Open in IMG/M
3300031797\|Ga0318550_10149922	Not Available	1120	Open in IMG/M
3300031798\|Ga0318523_10675730	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031846\|Ga0318512_10432251	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300031890\|Ga0306925_10350174	All Organisms → cellular organisms → Bacteria → Proteobacteria	1586	Open in IMG/M
3300031890\|Ga0306925_10452090	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300031896\|Ga0318551_10194981	Not Available	1119	Open in IMG/M
3300031910\|Ga0306923_10024879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6383	Open in IMG/M
3300031910\|Ga0306923_10926523	Not Available	952	Open in IMG/M
3300031912\|Ga0306921_10131534	All Organisms → cellular organisms → Bacteria	2921	Open in IMG/M
3300031941\|Ga0310912_10037052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3358	Open in IMG/M
3300031945\|Ga0310913_10191484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1426	Open in IMG/M
3300031947\|Ga0310909_10215289	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300031954\|Ga0306926_11358948	Not Available	826	Open in IMG/M
3300032035\|Ga0310911_10511224	Not Available	696	Open in IMG/M
3300032041\|Ga0318549_10572086	Not Available	507	Open in IMG/M
3300032059\|Ga0318533_10535694	Not Available	858	Open in IMG/M
3300032059\|Ga0318533_11269877	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300032063\|Ga0318504_10311071	Not Available	746	Open in IMG/M
3300032063\|Ga0318504_10405971	Not Available	649	Open in IMG/M
3300032076\|Ga0306924_10676339	All Organisms → cellular organisms → Bacteria → Proteobacteria	1161	Open in IMG/M
3300032076\|Ga0306924_11242681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	803	Open in IMG/M
3300032180\|Ga0307471_102372726	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300032205\|Ga0307472_100269777	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300032261\|Ga0306920_100231895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2754	Open in IMG/M
3300032261\|Ga0306920_100773823	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300032261\|Ga0306920_103126134	Not Available	621	Open in IMG/M
3300033289\|Ga0310914_10515253	Not Available	1081	Open in IMG/M
3300033290\|Ga0318519_10403378	Not Available	815	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.23%
Host-Associated	Host-Associated	9.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.63%
Plants	Host-Associated → Plants	9.77%
Aquatic	Environmental → Aquatic	4.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.32%
Sediment	Environmental → Aquatic → Sediment	4.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%
Roots	Host-Associated → Plants → Roots	1.72%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.22%
Loam	Environmental → Terrestrial → Soil → Loam	21.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.15%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.15%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.57%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.57%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.57%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.57%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	20.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.02%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.02%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.15%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.15%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.15%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.57%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.57%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000684	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 31	Environmental	Open in IMG/M
3300000699	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79	Environmental	Open in IMG/M
3300000715	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026783	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 36 (SPAdes)	Environmental	Open in IMG/M
3300026809	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 47 (SPAdes)	Environmental	Open in IMG/M
3300026831	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 9 (SPAdes)	Environmental	Open in IMG/M
3300026947	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 6 (SPAdes)	Environmental	Open in IMG/M
3300026953	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 8 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_10004823	2228664021	Soil	QDRWSLLLVFQAMDSAKAFSIMHDTHKQDYLAQAERHIANAEDRIARQKRIIDKLVQTGQETDCAVSMLHALETCLHAFEQHREIIFVRCKT
INPgaii200_11433481	2228664022	Soil	MHDTHKQDYLAQAERHIAMAQERIARQKSIIDKLVQAGQETDCAVSMLXALETCXXAFERHREMIFERCNN
INPgaii200_11439482	2228664022	Soil	MHQTFKQDYLAQAERHLAIVQERVARQKKIIDELVQEGQETDCAVSMLHALETCLHAFEQHREMIFERCKN
JGI12337J11877_1009991	3300000684	Tropical Forest Soil	MHDTHKQDYLAQAERHIAKAQERIARQKGIIDKLVQAGQETDCATSMLHALETCLHAFEQ
JGI12536J11923_1036092	3300000699	Tropical Forest Soil	MHDTHKQDYLAQAERHIAKAQERIARQKGIIDKLVQAGQETDCATSMLHALETCLHAFEQHREMIFERCKN*
JGI12409J11926_1040631	3300000715	Tropical Forest Soil	MHDTHKQDYLAQAERHIAKAQERIARQKGIIDKLVQAGQETDCATSMLHALETCLHAFE
JGI11643J12802_108011512	3300000890	Soil	YAQDRWSLLLVFQAMDSAKAFSIMHDTHKQDYLAQAERHIANAEDRIARQKRIIDKLVQTGQETDCAVSMLHALETCLHAFEQHREIIFVRCKT*
JGI1027J12803_1011990932	3300000955	Soil	MHDTHKQDYLAQAERHIAMAQERIARQKSIIDKLVQAGQKTDCAVSMLQALETCLHAFERHREMIFERCNN*
JGI1027J12803_1018846541	3300000955	Soil	MRDTDKQDYVAQAERHITIVQERIARQKKIIDELTQTGRESDCAVSMLHALESCLQAFEQHRETIFERCEAVEATV*
JGI10216J12902_1018337121	3300000956	Soil	MAEAARKAPQGMNDTQKQDYLAQAERHVAMVEDRIACQKRIIDKLAQAGQETGCAVSMLHALETSLHALEQHRETIFERCKT*
JGI10216J12902_1080458572	3300000956	Soil	MHDTHKQDYLAQAERHIAIAQERIARQKSIIDKLVQAGQETDCAVSMLQALETCLHAFERHREMIFEQCNN*
JGI10216J12902_1084086732	3300000956	Soil	ALTKGCSAMHDTHKQDYLAQAERHFAIVQERVARQKSIIDELVRAGHETDCAVSMLNALETCLHAFEQHRETIFERCKN*
Ga0063454_1019373662	3300004081	Soil	MSSRRCARRCPASAKASSTMHDTYKQDYLAQAERHIAIAEDRIARQKKIIDELVQARQETDCAVSMLHALETCLHAFEQHHEMIFERCKN*
Ga0062591_1025084152	3300004643	Soil	MHEIFKQDYLAQAERHIAIAQDRIARQKTIIDELVQEGQETDCAISMLHALETCLHAFEQHREIIFERCKY*
Ga0066678_105011241	3300005181	Soil	RTNTDIVRPLNVTGIRTEQEDLDMAEAASKVPAGMNDTHKQDYLAQAERHIAIARDRVARQKTIIDKLAQAGQETDCAVSMLHALETCLHSFEQHRETIFERCKT*
Ga0070676_113110702	3300005328	Miscanthus Rhizosphere	MHDTYKQDYLAQAERHIAIAEDRIARQKRIIDELVQAGQETDCPISMLHARETCLHAFEQHHEMIFERCKN*
Ga0066388_1000466343	3300005332	Tropical Forest Soil	MAEAAIKVPQGMNDAQKQDYLAQAERHIAMAEDRIACQKRIIDKLAQAGQETDCAVSMLHALETCLHALEQHRETIFGRCKT*
Ga0066388_1006004423	3300005332	Tropical Forest Soil	MAKAASKVPSGMHDTHKQDYLAQAERHIAIAQDRIACQKRIIDELVQAGQQTDCAVSMLHALETCLHAFVQHRETIFERCNGPS*
Ga0066388_1007008053	3300005332	Tropical Forest Soil	MNYTQKQDYVSQAERHITIVQDHIARQKRIIDELAQAGQETDCAVSMLRALETCLHAFEQHRETIFERCSGGL*
Ga0066388_1010701062	3300005332	Tropical Forest Soil	MAEAAIKVPQSMAEAAIKVPQGMNDTQKQDHLAQAERHIAKVEDRIAWQKRIIDRLAQAGQETDCAVSMLHALETCLHVFEQHRETIFGRCKD*
Ga0066388_1021847051	3300005332	Tropical Forest Soil	MAEAARKVPPIMHDTDRQDYLAQAERHIAFIENRIARQKRIIEDRIQAGEETDCAVSMLHALETSLHAFEQHCETIFERCKD*
Ga0066388_1024780881	3300005332	Tropical Forest Soil	MAEAARKLPPIMHDTDKQDYLAQAERHIAIVEGRIARQKRIIDKLAQARQDTDCAVSMLHALETCLHAFERHCDMIFERCKT*
Ga0066388_1026276441	3300005332	Tropical Forest Soil	KQDYLAQAERHIAIAENRIARQKTIIDKLAQAGQETDCAVSMLHALETCLQAFEQHRETIFERCKI*
Ga0066388_1056080432	3300005332	Tropical Forest Soil	QAERHIAIVQDRVARQKRIIDKLGQAGQDTDCAVSLLHALETCLHAFEQHHDTIFERCKT
Ga0066388_1056652632	3300005332	Tropical Forest Soil	MHDTLKQDYLAQADRHIAMAQERIARQKRMINELVQTRQETDCAVSMLHALETCLRAFEQHREMIFDQCRT*
Ga0066388_1060758542	3300005332	Tropical Forest Soil	DYLAQAERHIAIVQDRVAREKRIIDKLAEAGQDTDCAVSMLHALETCLHAFEQHHETIFERCKTFATVNEATAISSTT*
Ga0066388_1077456961	3300005332	Tropical Forest Soil	DAFKQDYLAQADRHVAIAHERIARQKMIIDELVQQGQEADCAVSMLHALETCLGAFEQHREMIFERCKN*
Ga0066388_1078978001	3300005332	Tropical Forest Soil	MHDTDKQDYLAQAERHIAIVQDRVARQKRIIDKLGQAGQDTDCAVSMLHALETCVHAFEQHRERIFERCET*
Ga0070711_1019042322	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ERHIAIAQERIARQKTILDELVQKGQETDCAISMLHAPETCLHAFEQHREMIFKRCKN*
Ga0066903_1005464465	3300005764	Tropical Forest Soil	MHDTDKQDYIAQAERHITFVEERIDRQKRIIDELAETGRETDCAVSMLHALETCLRALEQHRKTIFERCEA*
Ga0066903_1006855123	3300005764	Tropical Forest Soil	MAEAARKVPPVMHDTDRQDYLAQAERHIAFIQNRIARQRRIIEDRIQAGEETDCAVSMLHALETCLHAFEQHCETIIERCKD*
Ga0066903_1011660491	3300005764	Tropical Forest Soil	MAEAARKLDMAEAARKLPPIMHDADKQDYLAQAERHIAIVEARIARQKRIIDKLAQTRQDTDCAASMLHALETCLHAFEQHRE
Ga0066903_1012495001	3300005764	Tropical Forest Soil	MAEAAIKVSQSMSEAAIKVPQDMNDTQKQDYLAQAERHIAKVEDRIAWQKRIIDRLAQAGQETDCAVSM
Ga0066903_1013800512	3300005764	Tropical Forest Soil	MAEAARKLHMAEAARKLPPIMHDTDKQDYLAQAERHIAIVQDRVARQKRIIDKLGQAGQDTDCAVSMLHALETCVHAFEQHREKIFERCET*
Ga0066903_1015561003	3300005764	Tropical Forest Soil	MAEAARKVPPIMQDTDRQDYLAQAERHIAIVQERMARQKRIIDELAQAGQDTDCAVSMLHALETCLHAFEQHRETIFERCET*
Ga0066903_1016587833	3300005764	Tropical Forest Soil	MAEAARKLDMAEAARKLPPIMHDTDRQDYLAQAERHIAVVEDRIANQERIIEKLAQARQDTDCAASMLHALETCLHAFEQHRETIFERCTT*
Ga0066903_1017067052	3300005764	Tropical Forest Soil	MAEAARKLHMAEAARTLPPIMHDTDKQDYLAQAERYIVMAEDRITRQTRIIDKLAQAGQETNCAVSMLHALETCLHAFEQHRETIFERCTT*
Ga0066903_1019065972	3300005764	Tropical Forest Soil	MAEAARKLDMAEAVRKRSPILHDTDKQDYLAQAERHIAIVEDRIAHQKRIIDELAQTRRDTDCAASMLHALETCLHAFEQHRETIFERCKT*
Ga0066903_1020804391	3300005764	Tropical Forest Soil	MHDTDEQDYIAQAERHITFVQERIGRQRTIIDELAQTGRETDCAVSMLHALETCLRALEQHRETIFERCEA*
Ga0066903_1027050072	3300005764	Tropical Forest Soil	MHDAHKQDYLAQAERHLAIVQERVARQKSIIDELVRAGHGTDCAVSMLNALETCLHAFEQHRETIFERCKN*
Ga0066903_1029099693	3300005764	Tropical Forest Soil	MAEAARKLHMAEAARKLPPIMHDTDKQDYLAQAERHIAIVQDRVARQKRIIDKLGQAGQDTDCAVSLLHALETCLHAFEQHHDTIFERCKT*
Ga0066903_1052303682	3300005764	Tropical Forest Soil	MAEAARKLDMAEAAIKLPPIMHDTDKEDYLAQAERHIAIVELRIARQKRIIDKLAQARQDTYCAVSMLHALETCLHAFERHC
Ga0066903_1058491531	3300005764	Tropical Forest Soil	MAEAARKLDLAEAARNLPPIIHDTDKQDYLAQAERHIAIVEDRIARQKRIIDKLAQARQDTDCAVSMLHALETCLHAFEQHRETIFE
Ga0066903_1060266191	3300005764	Tropical Forest Soil	MHDTLKQDYLAQAERHIAIAQERIARQKSIIDELVQAGEETDCAVSMLHTLETCLHAFEQHRGTIAERCKN*
Ga0066903_1086628401	3300005764	Tropical Forest Soil	MAEAARRLNMAEAARKLPPIMHDTDKQDYLAQAERHIAIVEGRIARQKRIIDKLAQARQDTYCAVSMLHALETCLHAFERHC
Ga0075365_101935111	3300006038	Populus Endosphere	MHDTVKQDYLAQAERHLAIVQERVARQNKIIDELVQEGQETDCAVSMLHALETCLHAFEHHREMIFERCNNR*
Ga0075365_105754931	3300006038	Populus Endosphere	MHDTYKQDYLAQAERHIAICEDRIARQKRIIDELVQAGQETDCAISMLHALETCLHAFEQ
Ga0075428_1002762312	3300006844	Populus Rhizosphere	MHDTVKQDYLAQAVRHLAIVQERVARQNKIIDELVQEGQETDCAVSMLHALETCLHAFEHHREMIFERCNNR*
Ga0075418_127332662	3300009100	Populus Rhizosphere	MHDTFKQDYLAQAERHIAIAQERIARQKKIIDELVQKGEETDCATSMLHALETCLHAFEQHGEMIFERCKN*
Ga0075418_129682222	3300009100	Populus Rhizosphere	MHDTYKQDYLAQAERHIAFAEDRIARQKRIIDELAQEGQETDCAVSMLHALETCLRAFEQHREMIFERCKN*
Ga0066709_1023820182	3300009137	Grasslands Soil	MAEAASKVPAGMNDTHKQDYLAQAERHIAIARDRVARQKTIIDKLAQAGQETDCAVSMLHALETCLHSFEQHRETIFERCKT*
Ga0114129_122862432	3300009147	Populus Rhizosphere	MHDTVKQDYLAQAERHLAIVQERVARQNKIIDELVQEGQETDCAVSMLHALETCLQAFEHHREMIFERCKN*
Ga0114129_128698952	3300009147	Populus Rhizosphere	MHDTYKQDYLAQAERHIAFAEDRIARQKRIIDELAQEGQETDCAVSMLHALETCLRAFEQHREMIFERCMN*
Ga0111538_112999082	3300009156	Populus Rhizosphere	MHDTYKQDYLAQAERHIAFAEDRIARQKRIIDELAQEGQETDCAVSMLHALETCLHAFEQHRETIFERCMN*
Ga0126374_108566072	3300009792	Tropical Forest Soil	MHDTQKQDYLAQAERHIAIAENRIARQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCTT*
Ga0126374_111990591	3300009792	Tropical Forest Soil	MHDTHKQDYLAQAERHIMIAQERIARQKSIIDELVQAGHETDCAVSMLDALETCLHAFEQHRETI
Ga0126380_105006431	3300010043	Tropical Forest Soil	MHDTHKQDYLAQAERHITIAQERIARQKSIIDELVQAGQETDCAVSMLDALETCLHAFEQHRGTIFERCKN*
Ga0126384_109275622	3300010046	Tropical Forest Soil	MYDTQKQDYLAQAERHIAIAQDRIAWQKRIVDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT*
Ga0126373_110201852	3300010048	Tropical Forest Soil	MAEAARKLHMAEAARKLPPIMHDTDTQDYLAQAERHIAIVQDRVARQKRIIDKLGQAGQDTDCAVSMLHALETCVHAFEQHRERIFERCET*
Ga0126373_122850861	3300010048	Tropical Forest Soil	MAEAARKLHMAEAARTLPPIMHDTDKQDYLAQAERYIVMAEDRITRQTRIIDKLAQAGQETNCAVSMLHALETCLHAFEQHRETIFERCKTRCTVVTALDNQRVTRSQQ*
Ga0126370_104386311	3300010358	Tropical Forest Soil	MHDTHKQDYLAQAKRHIAIAEERIARRKSIIDELVQAEQETDCAVSMLDALETCLHAFQQHRGTIFERCKN*
Ga0126370_121980822	3300010358	Tropical Forest Soil	MAEAARKLHMAEAARKLPPIMHDTDKQDYLAQAERHIAIVQDRVARQKRIIDKLGQAGQDTDCAVSMLHALETCVHAFEQHRERIFERCET*
Ga0126372_107019661	3300010360	Tropical Forest Soil	QDYLAQAKRHIAIAEERIARRKSIIDELVQAEQETDCAVSMLDALETCLHAFQQHRGTIFERCKN*
Ga0126372_122718832	3300010360	Tropical Forest Soil	MAEAARKLDMAEAARRLPPIMHDTDRQDYLAQAERHIAIVEDRIAHQKRIIEKLAQARQGTDCADSMLHALETCLHAFEQHR
Ga0126378_105263633	3300010361	Tropical Forest Soil	MAEAAIKVSQSMSEAAIKVPQDMNDTQKQDYLAQAERHIAKVEDRIAWQKRIIDRLAQAGQETDCAVSMLHALETCLHVFEQHRETIFGRCKD*
Ga0126378_112791661	3300010361	Tropical Forest Soil	MHDTHKQDYLAQAERHIAIAQERIARQKSIIDELVQAGQETDCAVSMLDALETCLHAFEQHRGTIFERCKN*
Ga0126378_115836361	3300010361	Tropical Forest Soil	MHDTDKQDYIAQAERHITFVQERIGRQRRIIDELGQTGRETDCAVSMLHALETCLRALEQHRETIFERCKA*
Ga0126378_125594001	3300010361	Tropical Forest Soil	GIPTDQEDLDMAEAARKLHMAEAARTLPPIMHDTDKQDYLAQAERYIVMAEDRITRQTRIIDKLAQAGQETNCAVSMLHALETCLHAFEQHRETIFERCTT*
Ga0126378_127613941	3300010361	Tropical Forest Soil	AQAERHIAIAENRIARQKTIIDKLAQAGQETDCAVSMLHALETCLQAFEQHRETIFERCKI*
Ga0126377_108441002	3300010362	Tropical Forest Soil	MHDTDKQDYLAQAERHIAIAENRIARQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCEM*
Ga0126379_117542403	3300010366	Tropical Forest Soil	CYPAGMHDIQKYDCIAQAERHIAIAQDRIARQKRIIDELAQTGLETDCAVLMLRALETCLRAFKQHRETVLERCVG*
Ga0105239_135263261	3300010375	Corn Rhizosphere	MHDTYKQDYLAQAERHITLAEDRIARQKRIIDELVQEGQETDCAVSMLRALETCLHAFEQHREMIFERCMN*
Ga0126381_1011439662	3300010376	Tropical Forest Soil	MHDTDKQDYIAQAERHITFVQERIGRQRTIIDELAQTGRETDCAVSMLHALETCLRALEQHRETIFERCKA*
Ga0126381_1020720303	3300010376	Tropical Forest Soil	DMAEAARKLPPIMHDTDRQDYLAQAERHIAIVEDRIAHQKRIIEKLAQARQGTDCAASMLHALETCLHAFEQHRETIFERCTT*
Ga0126381_1025589191	3300010376	Tropical Forest Soil	TEQEDLDMAEAASKVPSGMHDTHKQDYLAQAERHIAIAQDRIACQKRIIDELVQAGQQTDCAVSMLHALETCLHAFVQHRETIFERCNGPS*
Ga0126381_1044667641	3300010376	Tropical Forest Soil	QKQDYLAQAERHIAIAENRIARQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCEM*
Ga0126383_113714642	3300010398	Tropical Forest Soil	MAEAARGMHDTHKQDYLAQAERHIAIAQDRIACQKRIIDELVQAGQQTDCAVSMLHALETCLHAFVQHRETIFERCNGPS*
Ga0126383_120112841	3300010398	Tropical Forest Soil	MAEAARKLHMAEAARKLPPIMHDTDKQDYLAQAERHIAIVENRIARQKRIIDKLAQARQDTDCAVSMLHALETCLHAFEQHRETI
Ga0134127_116856582	3300010399	Terrestrial Soil	MHDTYKQDYLAQAERHIAIAEDRIARQKRIIDELVQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKN*
Ga0138513_1000146572	3300011000	Soil	MHETFKQDYLAQAERHLAIVQERVARQKKIVDQLVQEGQETDCAVSMPHALETCLHAFEQHREMIFERCKN*
Ga0137377_117949022	3300012211	Vadose Zone Soil	AEAASKVPAGMNDTHKQDYLAQAERHIAIARDRVARQKTIIDKLAQAGQETDCAVSMLHALETCLHSFEQHRETIFEQCKT*
Ga0126375_105576271	3300012948	Tropical Forest Soil	MHDTDKQDYIAQAERHITFVQERIGRQRTIIDELAQTGRETDCAVSMLHALETCLRALEQHRETIFERCET*
Ga0164298_107730651	3300012955	Soil	SAKASSTMHDTYKQDYLAQAERHIAIAEDRIARQKKIIDELVQAGQETDCAVSMLHALETCLHAFEQHLEMIFERCKN*
Ga0164298_116750791	3300012955	Soil	LPAERHIAIAQERIARQKTILDELVQKGQETDCAISMLHAPETCLHAFEQHREMIFKRCKN*
Ga0126369_113240341	3300012971	Tropical Forest Soil	TKTDIFRPLNVTGIPTEQEGPDMAEAAIKVPQGMNDAQKQDYLAQAERHIAMAEDRIACQKRIIDKLAQAGQETDCAVSMLHALETCLHALEQHRETIFGRCKT*
Ga0126369_115188991	3300012971	Tropical Forest Soil	MMHHLQKQDYLAQAERHVAMAQHRVACQKRIVDQLVHAGLETDCAISMLHALETCLNALEQHCEAISERCNTH*
Ga0126369_116601451	3300012971	Tropical Forest Soil	MAEAASKVPSGMHDTHKQDYLAQAERHIAIAQDRIACQKRIIDELVQAGQQTDCAVSMLHALETCLHAFVQHRETIFERCNGPS*
Ga0126369_127596981	3300012971	Tropical Forest Soil	QAERHIAIVQDRVARQKRIIDKLGQAGQDTDCAVSMLHALETCVHAFEQHRERIFERCET
Ga0163163_108203532	3300014325	Switchgrass Rhizosphere	MHEIFKQDYLAQAERHIAIAQDRIARQKTIIDELVQEGQETDCAISMLHALETCLHAFEQHRE
Ga0132258_136667332	3300015371	Arabidopsis Rhizosphere	MHETFKQDYLAQAERHLAFVQERVARQKKIIDELVQEGQETDCAVSMLHALETCLHAFEQHREMIFEQCKN*
Ga0132258_139379731	3300015371	Arabidopsis Rhizosphere	MHDTVKQDYLAQAERHLAIVQERVARQKKIIDELVQGGQETDCAVSMLHALETCLHVFEQHREMIFEQCKN*
Ga0132256_1010862702	3300015372	Arabidopsis Rhizosphere	MHETFKQDYLAQAERHLAIVQERVARQKKIIDELVQQGQETDCAVSMLHALETCLHVFEQHREMIFEQCKN*
Ga0132257_1022925412	3300015373	Arabidopsis Rhizosphere	MHDTYKQDYLAQAERHIAFAEDRIARQKRIIDELAHEGQETDCAVSMLHALETCLHA
Ga0182041_103463352	3300016294	Soil	MAEAASKVPPGMHNTHKQDYLAQAERHIAITEDRIARQKTIIDRLAQAGQETDCAASMLHALETCLQAFEQHRETIFEQCKT
Ga0182041_104627171	3300016294	Soil	THKQDYLAQAERHIALAQDRIAWQKRIIDELAQAGQETDCAVSMFHALETCLHAFEQHRETIFERCKT
Ga0182033_108626281	3300016319	Soil	KQDYLAQAERHIAIAENRIARQKTIIDKLAQAGQETDCAVSMLHALETCLQALEQHRETIFERCKI
Ga0182033_121709752	3300016319	Soil	MHDTHKQDYLAQAERHITIAQERIARQKSIIDELVQAGQETDCAVSMLDARERCLHTFEQHREMIFERCKN
Ga0182035_116744731	3300016341	Soil	DYLAQAERHIAIVEARIARQKRIIDKLAQTRQDTDCAASMLHALETCLHAFEQHREAIFERCTT
Ga0182032_106987021	3300016357	Soil	PPGMHDTHKQDYLAQAERHIAIAENRIARQKTIIDKLAQAGQETDCAVSMLHALETCLQALEQHRETIFERCKI
Ga0182040_101080821	3300016387	Soil	MAEAARKLDMAEAARKLPPIMHDADKQDYLAQAERHIAIAENRIARQKTIIDKLAQAGQETDCAVSMLHALETCLQALE
Ga0182040_110095142	3300016387	Soil	QAERHIAIVEARIARQKRIIDKLAQTRQDTDCAASMLHALETCLHAFEQHREAIFERCTT
Ga0182039_112966632	3300016422	Soil	GMNDTQKQDYLAQAERHIAIAENRIARQKTIIDKLAQAGQETDCAVSMLHALETCLQALEQHRETIFERCKI
Ga0184608_101864361	3300018028	Groundwater Sediment	MHETFKQDYLAQAERHIAIAEDRIARQKKIIDELVQAGQETDCAVSMLHALETCLHAFEQHLEMIFERCKN
Ga0184621_100492202	3300018054	Groundwater Sediment	MYDSYKQDYLAQAERHIAIAEDRIARQKKIIDELVQAGQETDCAVSMLHALETCLHAFEQRREMIFERCKN
Ga0184635_102324901	3300018072	Groundwater Sediment	MHYTVKQDYLAQAERHIAIAEDRIARQKRIVDELVQEGQETDCAVSMLHALETCLHAFEQHREMIFERCKN
Ga0184624_101154821	3300018073	Groundwater Sediment	MHETFKQDYLAQAERHLAIVQERVARQKKIVDQLVQEGQETDCAVSMLHALETCLHAFEQHREMIFERCKN
Ga0184640_103545142	3300018074	Groundwater Sediment	MHETFKQDYIAQAERHLAIVQERVARQKKIVDQLVQEGQETDCAVSMLHALETCLHAFEQHREMIFERCKN
Ga0184625_106270872	3300018081	Groundwater Sediment	FSTMHDTYKQDYLAQAERHIAMAEDRIARQKRIIDELVQAGQETDCAVSMLHALETCLHAFEQHREMIFERCKN
Ga0184639_102643951	3300018082	Groundwater Sediment	TVKQDYLAQAERHIAIAEDRIARQKRIVDELVQEGQETDCAVSMLHALETCLHAFEQHREMIFERCKN
Ga0190270_129310562	3300018469	Soil	MHDTYKQDYLAQAERHIAFAEDRIARQKRIIDELVQAGQETDCAVSMLHALETCLHAFEQHREMIFERCKN
Ga0213872_101098131	3300021361	Rhizosphere	AEAARKLDMAEAIKLPPIMHDTDRQDYLAQAERHIAIVEGRLARQKRIIDKLAQARQDTYCAVSMLHALETCLHAFERHCDMIFERCKT
Ga0213879_100683411	3300021439	Bulk Soil	MAEAARKLDMAEAIKLPPIMHDTDKQDYLAQAERHIAIVELRIARQKRIIDKLAQARQDTDCAVSMLHALETCLHAFEQHGEAIFERCKT
Ga0213878_100966481	3300021444	Bulk Soil	MAEAARKLDMAEAIKLPPIMHDTDRQDYLAQAERHIAIVEGRLARQKRIIDKLAQARQDTYCAVSMLHALETCLQAFERHCDMIFERCKT
Ga0126371_108368092	3300021560	Tropical Forest Soil	MAEAARKLHMAEAARKLPPIMHDTDKQDYLAQAERHIAIVQDRVARQKRIIDKLGQAGQDTDCAVSMLHALETCVHAFEQHREKIFERCET
Ga0126371_108627222	3300021560	Tropical Forest Soil	MHDTHKQDYLAQAERHITIAQERIARQKSIIDELVQAGQETDCAVSMLDALETCLHAFEQHRGTIFERCKN
Ga0126371_108835161	3300021560	Tropical Forest Soil	QEDLDMAEAASKVPSGMHDTHKQDYLAQAERHIAIAQDRIACQKRIIDELVQAGQQTDCAVSMLHALETCLHAFVQHRETIFERCNGPS
Ga0126371_111376471	3300021560	Tropical Forest Soil	VTGIPTDQEDLDMAEAARKLHMAEAARTLPPIMHDTDKQDYLAQAERYIVMAEDRITRQTRIIDKLAQAGQETNCAVSMLHALETCLHAFEQHRETIFERCTT
Ga0126371_130344871	3300021560	Tropical Forest Soil	MHDTDKQDYIAQAERHITFVQERIGRQRTIIDELAQTGRETDCAVSMLHALETCLRALEQHRETIFERCEA
Ga0207778_1041604	3300026783	Tropical Forest Soil	DTHKQDYLAQAERHIAKAQERIARQKGIIDKLVQAGQETDCATSMLHALETCLHAFEQHREMIFERCKN
Ga0207820_1009585	3300026809	Tropical Forest Soil	MHDTHKQDYLAQAERHIAKAQERIARQKGIIDKLVQAGQETDCATSMLHALETCLHAFEQHREMIFERCKN
Ga0207738_1170653	3300026831	Tropical Forest Soil	HKQDYLAQAERHIAKAQERIARQKGIIDKLVQAGQETDCATSMLHALETCLHAFEQHREMIFERCKN
Ga0207853_10312172	3300026947	Tropical Forest Soil	MHDTHKQDYLAQAERHIAKAQERIARQKGIIDKLVQAGQETDCATSMLHALETCLHAFEEHREMIFERCKN
Ga0207835_10471661	3300026953	Tropical Forest Soil	MHDTHKQDYLAQAERHIAKAQERIARQKGIIDKLVQAGQETDCATSMLHALETCLHAFEEHREMIFE
Ga0209382_106957032	3300027909	Populus Rhizosphere	MHDTVKQDYLAQAERHLAIVQERVARQNKIIDELVQEGQETDCAVSMLHALETCLHAFEHHREMIFERCNNR
Ga0209069_102744672	3300027915	Watersheds	MHETFKQDYLAQAERHLAIVQERVARQKKIIDELVQEGQETDCAVSMLHALETCLHAFEQHREMIFERCKN
Ga0307322_100815322	3300028710	Soil	MHDTYKQDYLAQAERHIAIAEDRIARQKKIIDELVQAGQETDCAVSMLHALETCLHAFEQHLEMIFERCKN
Ga0307316_101007162	3300028755	Soil	MHDTYKQDYLAQAERHIAIAEDRIARQKKIIDELVQAGQETDCAVSMLHALETCLHAFEQHREMIFERCKN
Ga0307280_101729462	3300028768	Soil	MHETFKQDYLAQAERHLAIVQERVARQKKIVDQLVQEGQETDCAVSMLHALETCLHAFEQHREMIFKRC
Ga0307282_101757351	3300028784	Soil	MYDTYKQDYLAQAERHIAIAEDRIARQKKIIEELVQAGQETDCAVSMLHALETCLHAFEQHLEMIFERCKN
Ga0307299_102255821	3300028793	Soil	MHDTYKQDYLAQAERHIAIAEDRIARQKKIIDELVQAGQETDFAVSMLHALETCLHAFEQHLEMIFERCKN
Ga0307503_106142082	3300028802	Soil	MHDTYKQDYLAQAERHISIAEDRIARQKRIIDELVQAGQETDCAISMLHALETCLHAFEQHHEMIFERCKN
Ga0307314_101076072	3300028872	Soil	HETFKQDYLAQAERHVAIAQERIARQKTIIDELVQEGQETDCAISMLHALETCLHAFEQHLEMIFERCKN
Ga0307300_103330901	3300028880	Soil	KSSRRCARRCPASAKAPSTMYDTYKQDYLAQAERHIAIAEDRIARQKKIIDELVQAGQETDCAVSMLHALETCLHAFEQHLEMIFERCKN
Ga0307308_102250082	3300028884	Soil	MHDTYKQDYLAQAERHIAIAEDRIARQKKIIEELVQAGQETDCAVSMLHALETCLHAFEQHLEMIFERCKN
Ga0170820_173021462	3300031446	Forest Soil	MHETFKQDYLAQAERHLAIVQERVARQKKIVDQLVQEGQETDCAVSMLHALETCLHAFEQHRGTIFERCNN
Ga0170819_120280502	3300031469	Forest Soil	MHETFKQDYLAQAERHLAIVQERVARQKKIVDQLVQEGQETDCAVSMLHALETCLHAFEQHRG
Ga0318516_100002026	3300031543	Soil	MAEAASKVPPGMHDAHKQDYLAQAERHIAIAQDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0318541_100878021	3300031545	Soil	MAEAARKLDMAEAARKLPPIMHDADKQDYLAQAERHIAIVEARIARQKRIIDKLAQTRQDTDCAASMLHALETCLHAFEQHREAIFERCTT
Ga0318541_102284162	3300031545	Soil	MAEAASKVPPGMHDTHKHDYLAQAERHIAIAQDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0310915_103663172	3300031573	Soil	MAEAASKVPPGMHDTDKQDYLAQAERHIAITEDRIARQKTIIDRLAQAGQETDCAASMLHALETCLQAFEQHRETIFEQCKT
Ga0310915_106369882	3300031573	Soil	NVTGIPTEQEDLDMAEAASKVPPGMHDTHKQDYLAQAERHIAIAEDRIARQKTIIDRLAQAGQETDCAVSMLHALETCLHVFEQHRETIFERCKT
Ga0306917_108443122	3300031719	Soil	DMAEAASKVPPGMHDTHKHDYLAQAERHIAIAQDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0318493_100873541	3300031723	Soil	SPAKRHGYPTEQEDLDMAEAASKVPPGMHDAHKQDYLAQAERHIAIAQDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0318494_106301252	3300031751	Soil	FQQTARTNTDIFRPLNVTGIPTEQEDLDMAEAASKVPPGMHDTHKHDYLAQAERHIAIAQDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0318546_103213223	3300031771	Soil	DYLAQAERHIAIAEDRIARQKTIIDRLAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0318547_105005952	3300031781	Soil	MAEAASKVPPGMHDTHKHDYLAQAERHIAIAQDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCK
Ga0318550_101499221	3300031797	Soil	MAEAASKVPPGMHDTHKHDYLAQAERHIAIAQDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRE
Ga0318523_106757302	3300031798	Soil	AQAERHIAIAEDRIARQKTIIDRLAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCK
Ga0318512_104322511	3300031846	Soil	EQEDLDMAEAASKVPPGMHDTHKQDYLAQAERHIAIAEDRIARQKTIIDRLAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0306925_103501741	3300031890	Soil	MAEAASKVPPGMHNTHKQDYLAQAERHIALAQDRIAWQKRIIDELAQAGQETDCAVSMFHALETCLHAFEQHRETIFERCKT
Ga0306925_104520904	3300031890	Soil	HDTHKQDYLAQAERHIAIAEDRIARQKTIIDRLAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0318551_101949811	3300031896	Soil	MAEAARKLDMAEAARKLPPIMHDADKQDYLAQAERHIAIVEARIARQKRIIDKLAQTRQDTDCAASMLHALETCLHAFEQHREAIFERCTTRAMTI
Ga0306923_100248798	3300031910	Soil	MAEAASKVPPGMHDTHKQDYLAQAERHIAIAEDRIARQKTIIDRLAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0306923_109265232	3300031910	Soil	MAEAASKVPPGMHDTDKQDYLAQAERHIAITEDRIARQKTIIDRLAQAGQETDCAASMLHALETCLQAFEQHRETSSSSARRDRHKR
Ga0306921_101315343	3300031912	Soil	DADKQDYLAQAERHIAIVEARIARQKRIIDKLAQTRQDTDCAASMLHALETCLHAFEQHREAIFERCTT
Ga0310912_100370526	3300031941	Soil	EDLGMAEAASKVPPGMHDAHKQDYLAQAERHIAIAQDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0310913_101914841	3300031945	Soil	MAEAASKVPPGMHDTDKQDYLAQAERHIAITEDRIARQKTIIDRLAQAGQETDCAASMLHALETCLQAFEQHRET
Ga0310909_102152893	3300031947	Soil	MAEAASKVPPGMHDTHKQDYLAQAERHIAIAEDRIARQKTIIDRLAQAGQETDCAVSMLHALETCLHAFEQHRKTIFERCKT
Ga0306926_113589481	3300031954	Soil	MAEAASKVPPGMHNTHKQDYLAQAERHIALAQDRIAWQKWIIDELAQAGQETDCAVSMFHALETCLHAFEQHRETIFERCKT
Ga0310911_105112242	3300032035	Soil	GMHDTHKHDYLAQAERHIAIAQDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0318549_105720861	3300032041	Soil	DYLAQAERHIAITEDRIARQKTIIDRLAQAGQETDCAASMLHALETCLQAFEQHRETIFEQCKT
Ga0318533_105356942	3300032059	Soil	MAEAASKVPPGMHDTHKQDYLAQAERHIAIAQDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0318533_112698771	3300032059	Soil	MHDTHKQDYLAQAERHIAIAEDRIARQKTIIDRLAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0318504_103110711	3300032063	Soil	CYRSGMNDTQKQDYLAQAERHIAIAENRIARQKTIIDKLAQAGQETDCAVSMLHALETCLQALEQHRETIFERCKI
Ga0318504_104059711	3300032063	Soil	AQAERHIAIAQDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCK
Ga0306924_106763391	3300032076	Soil	MAEAASKVPPGMHDTDKQDYLAQAERHIAITEDRIARQKTIIDRLAPAGQETDCAASMLHALETCLQAFEQHRETIFEQCKT
Ga0306924_112426813	3300032076	Soil	RPLNVTGIPTEQEDLDMAEAASKVPPGMHDTHKQDYLAQAERHIAIAEDRIARQKTIIDRLAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0307471_1023727262	3300032180	Hardwood Forest Soil	MAEAASKVPAGMNDTHKQDYLAQAERHIAIARDRVARQKTIIDKLAQAGQETDCAVSMLHALETCLHAFEQHREMIFERCKN
Ga0307472_1002697771	3300032205	Hardwood Forest Soil	MHETFKQDYLAQAERHLAIVQERVARQKKIIDELVQEGQETDCAVSMLHALETCLHAFEQHREMIFKRCKN
Ga0306920_1002318952	3300032261	Soil	MNDTQKQDYLAQAERHIAIAENRIARQKTIIDKLAQAGQETDCAVSMLHALETCLQALEQHRETIFERCKI
Ga0306920_1007738233	3300032261	Soil	MAEAASKVPPGMHDTHKHDYLAQAERHIAIAQDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFE
Ga0306920_1031261341	3300032261	Soil	MAEAASKLPPGMHDTHKQDYLAQAERHIAMAEDRIARQKGIIDKLAQAGQETDCAVSMLHALETCFHAFEQHRETIFERCRT
Ga0310914_105152532	3300033289	Soil	MAEAASKVPPGMHDTHKQDYLAQAERHIAIAEDRIAWQKRIIDELAQAGQETDCAVSMLHALETCLHAFEQHRETIFERCKT
Ga0318519_104033782	3300033290	Soil	PIMHDADKQDYLAQAERHIAIVEARIARQKRIIDKLAQTRQDTDCAASMLHALETCLHAFEQHREAIFERCTT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F034501

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences