Metagenome / Metatranscriptome Family F034636

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F034636
Family Type	Metagenome / Metatranscriptome
Number of Sequences	174
Average Sequence Length	70 residues
Representative Sequence	VSAPVDCVPVSALAPDQDPEAVQAVALVADQVSVELLPLATVLGLAARLMVGTGCVTETVADCAALPPLPVQLRV
Number of Associated Samples	110
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.59 %
% of genes near scaffold ends (potentially truncated)	29.31 %
% of genes from short scaffolds (< 2000 bps)	74.71 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (78.736 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.632 % of family members)
Environment Ontology (ENVO)	Unclassified (27.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.218 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.07% β-sheet: 0.00% Coil/Unstructured: 68.93%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF00041	fn3	3.23
PF00550	PP-binding	1.94
PF13738	Pyr_redox_3	1.94
PF00132	Hexapep	1.29
PF13522	GATase_6	1.29
PF05899	Cupin_3	0.65
PF02397	Bac_transf	0.65
PF01522	Polysacc_deac_1	0.65
PF13727	CoA_binding_3	0.65
PF02563	Poly_export	0.65
PF00749	tRNA-synt_1c	0.65
PF08019	EptA_B_N	0.65
PF00150	Cellulase	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.65
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.65
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	0.65
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.65
COG2194	Phosphoethanolamine transferase for periplasmic glucans OpgE, AlkP superfamily	Cell wall/membrane/envelope biogenesis [M]	0.65
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.65
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.74 %
All Organisms	root	All Organisms	21.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.74 %
cellular organisms	root	All Organisms → cellular organisms	21.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.77 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	8.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	8.05 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.60 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	2.30 %
Candidatus Muproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria	1.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.74 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	6.90 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	4.02 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.30 %
Candidatus Muproteobacteria bacterium RBG_16_60_9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_60_9	1.15 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.74 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	6.90 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.02 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.30 %
Candidatus Muproteobacteria bacterium RBG_16_60_9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_60_9	1.15 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.74 %
Candidatus Taylorbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria	4.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.02 %
Candidatus Sungbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Sungbacteria	2.30 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.30 %
Candidatus Muproteobacteria bacterium RBG_16_60_9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_60_9	1.15 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.74 %
Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b	4.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.02 %
Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_51_29	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Sungbacteria → Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_51_29	2.30 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.30 %
Candidatus Muproteobacteria bacterium RBG_16_60_9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_60_9	1.15 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.57 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10213055	Not Available	649	Open in IMG/M
3300002245\|JGIcombinedJ26739_100762977	Not Available	847	Open in IMG/M
3300002245\|JGIcombinedJ26739_100762977	Not Available	847	Open in IMG/M
3300004080\|Ga0062385_10724510	Not Available	643	Open in IMG/M
3300004082\|Ga0062384_100795485	Not Available	660	Open in IMG/M
3300004152\|Ga0062386_100039665	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b	3526	Open in IMG/M
3300004635\|Ga0062388_100379551	Not Available	1219	Open in IMG/M
3300005994\|Ga0066789_10085019	Not Available	1365	Open in IMG/M
3300005995\|Ga0066790_10432114	Not Available	563	Open in IMG/M
3300006059\|Ga0075017_101031145	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	641	Open in IMG/M
3300006176\|Ga0070765_100252250	Not Available	1618	Open in IMG/M
3300006893\|Ga0073928_10002098	All Organisms → cellular organisms → Bacteria	35700	Open in IMG/M
3300009093\|Ga0105240_10074103	All Organisms → cellular organisms → Bacteria → Proteobacteria	4203	Open in IMG/M
3300009500\|Ga0116229_10312703	Not Available	1324	Open in IMG/M
3300009500\|Ga0116229_10394933	Not Available	1155	Open in IMG/M
3300009500\|Ga0116229_11544450	Not Available	524	Open in IMG/M
3300009522\|Ga0116218_1260228	Not Available	779	Open in IMG/M
3300009522\|Ga0116218_1260228	Not Available	779	Open in IMG/M
3300009522\|Ga0116218_1274664	Not Available	756	Open in IMG/M
3300009628\|Ga0116125_1145957	Not Available	654	Open in IMG/M
3300009633\|Ga0116129_1222454	Not Available	535	Open in IMG/M
3300009660\|Ga0105854_1276810	Not Available	579	Open in IMG/M
3300009709\|Ga0116227_10430252	Not Available	1004	Open in IMG/M
3300010341\|Ga0074045_10097314	Not Available	2040	Open in IMG/M
3300010341\|Ga0074045_10586728	Not Available	712	Open in IMG/M
3300010379\|Ga0136449_104383178	Not Available	521	Open in IMG/M
3300010396\|Ga0134126_10323329	Not Available	1804	Open in IMG/M
3300010869\|Ga0126359_1420233	Not Available	857	Open in IMG/M
3300012924\|Ga0137413_10419931	Not Available	966	Open in IMG/M
3300012927\|Ga0137416_10163103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1757	Open in IMG/M
3300012930\|Ga0137407_12125514	Not Available	536	Open in IMG/M
3300012944\|Ga0137410_10123720	Not Available	1944	Open in IMG/M
3300014495\|Ga0182015_10092023	Not Available	2116	Open in IMG/M
3300015051\|Ga0137414_1183159	Not Available	2403	Open in IMG/M
3300015051\|Ga0137414_1183159	Not Available	2403	Open in IMG/M
3300015206\|Ga0167644_1020702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b	2899	Open in IMG/M
3300015206\|Ga0167644_1064429	Not Available	1234	Open in IMG/M
3300017961\|Ga0187778_11053804	Not Available	565	Open in IMG/M
3300018034\|Ga0187863_10450441	Not Available	719	Open in IMG/M
3300019887\|Ga0193729_1236973	Not Available	591	Open in IMG/M
3300020004\|Ga0193755_1003845	All Organisms → cellular organisms → Bacteria → Proteobacteria	4781	Open in IMG/M
3300020021\|Ga0193726_1097605	Not Available	1335	Open in IMG/M
3300020021\|Ga0193726_1122195	Not Available	1159	Open in IMG/M
3300020579\|Ga0210407_10535631	Not Available	915	Open in IMG/M
3300020579\|Ga0210407_10611270	Not Available	849	Open in IMG/M
3300020580\|Ga0210403_10278373	Not Available	1372	Open in IMG/M
3300020581\|Ga0210399_11016577	Not Available	667	Open in IMG/M
3300020582\|Ga0210395_10119860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Sungbacteria → Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_51_29	1953	Open in IMG/M
3300020582\|Ga0210395_10119860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Sungbacteria → Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_51_29	1953	Open in IMG/M
3300020582\|Ga0210395_10119860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Sungbacteria → Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_51_29	1953	Open in IMG/M
3300020583\|Ga0210401_10396863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1242	Open in IMG/M
3300021168\|Ga0210406_10312903	Not Available	1274	Open in IMG/M
3300021171\|Ga0210405_10889105	Not Available	678	Open in IMG/M
3300021180\|Ga0210396_10263953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1529	Open in IMG/M
3300021180\|Ga0210396_10725212	Not Available	857	Open in IMG/M
3300021181\|Ga0210388_10003594	All Organisms → cellular organisms → Bacteria	12116	Open in IMG/M
3300021181\|Ga0210388_10037300	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	4023	Open in IMG/M
3300021181\|Ga0210388_10336188	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b	1327	Open in IMG/M
3300021181\|Ga0210388_10336188	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b	1327	Open in IMG/M
3300021181\|Ga0210388_11169931	Not Available	654	Open in IMG/M
3300021402\|Ga0210385_10055872	Not Available	2650	Open in IMG/M
3300021404\|Ga0210389_10007226	All Organisms → cellular organisms → Bacteria	8610	Open in IMG/M
3300021405\|Ga0210387_10001010	All Organisms → cellular organisms → Bacteria	20886	Open in IMG/M
3300021405\|Ga0210387_10222975	Not Available	1643	Open in IMG/M
3300021405\|Ga0210387_10377424	Not Available	1255	Open in IMG/M
3300021405\|Ga0210387_10377424	Not Available	1255	Open in IMG/M
3300021406\|Ga0210386_10121874	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300021407\|Ga0210383_10112009	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Sungbacteria → Candidatus Sungbacteria bacterium RIFCSPHIGHO2_02_FULL_51_29	2302	Open in IMG/M
3300021407\|Ga0210383_11065954	Not Available	683	Open in IMG/M
3300021407\|Ga0210383_11065954	Not Available	683	Open in IMG/M
3300021420\|Ga0210394_10000655	All Organisms → cellular organisms → Bacteria	67834	Open in IMG/M
3300021420\|Ga0210394_11283204	Not Available	626	Open in IMG/M
3300021433\|Ga0210391_10047306	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b	3425	Open in IMG/M
3300021433\|Ga0210391_10047306	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b	3425	Open in IMG/M
3300021433\|Ga0210391_10271654	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b	1330	Open in IMG/M
3300021433\|Ga0210391_10890099	Not Available	695	Open in IMG/M
3300021433\|Ga0210391_11305090	Not Available	560	Open in IMG/M
3300021474\|Ga0210390_10991373	Not Available	687	Open in IMG/M
3300021474\|Ga0210390_10991373	Not Available	687	Open in IMG/M
3300021477\|Ga0210398_10952130	Not Available	687	Open in IMG/M
3300021478\|Ga0210402_10535236	Not Available	1087	Open in IMG/M
3300021478\|Ga0210402_11335070	Not Available	644	Open in IMG/M
3300021478\|Ga0210402_11335070	Not Available	644	Open in IMG/M
3300021559\|Ga0210409_10179324	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1935	Open in IMG/M
3300021559\|Ga0210409_10511346	Not Available	1065	Open in IMG/M
3300021559\|Ga0210409_10511346	Not Available	1065	Open in IMG/M
3300021559\|Ga0210409_10511346	Not Available	1065	Open in IMG/M
3300021559\|Ga0210409_10805102	Not Available	812	Open in IMG/M
3300021559\|Ga0210409_11248174	Not Available	619	Open in IMG/M
3300021559\|Ga0210409_11362248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	585	Open in IMG/M
3300022499\|Ga0242641_1051092	Not Available	500	Open in IMG/M
3300022533\|Ga0242662_10087705	Not Available	869	Open in IMG/M
3300022533\|Ga0242662_10087705	Not Available	869	Open in IMG/M
3300022724\|Ga0242665_10145227	Not Available	745	Open in IMG/M
3300022724\|Ga0242665_10145227	Not Available	745	Open in IMG/M
3300025463\|Ga0208193_1051861	Not Available	898	Open in IMG/M
3300025627\|Ga0208220_1180773	Not Available	523	Open in IMG/M
3300025627\|Ga0208220_1180773	Not Available	523	Open in IMG/M
3300025634\|Ga0208589_1131798	Not Available	576	Open in IMG/M
3300026217\|Ga0209871_1099961	Not Available	565	Open in IMG/M
3300026291\|Ga0209890_10100705	Not Available	1003	Open in IMG/M
3300026294\|Ga0209839_10293752	Not Available	500	Open in IMG/M
3300026319\|Ga0209647_1145421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_60_9	1018	Open in IMG/M
3300027176\|Ga0208992_1060546	Not Available	519	Open in IMG/M
3300027559\|Ga0209222_1010316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_60_9	1902	Open in IMG/M
3300027559\|Ga0209222_1047094	Not Available	830	Open in IMG/M
3300027568\|Ga0208042_1077055	Not Available	847	Open in IMG/M
3300027860\|Ga0209611_10145017	Not Available	1514	Open in IMG/M
3300027860\|Ga0209611_10184730	Not Available	1288	Open in IMG/M
3300027860\|Ga0209611_10386225	Not Available	805	Open in IMG/M
3300027879\|Ga0209169_10013418	Not Available	4518	Open in IMG/M
3300027905\|Ga0209415_10009638	All Organisms → cellular organisms → Bacteria → Proteobacteria	16565	Open in IMG/M
3300027908\|Ga0209006_10817873	Not Available	754	Open in IMG/M
3300028747\|Ga0302219_10415754	Not Available	527	Open in IMG/M
3300028808\|Ga0302228_10449318	Not Available	570	Open in IMG/M
3300028906\|Ga0308309_10685758	Not Available	890	Open in IMG/M
3300029944\|Ga0311352_10361463	Not Available	1196	Open in IMG/M
3300029951\|Ga0311371_10470071	Not Available	1674	Open in IMG/M
3300029953\|Ga0311343_10334418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1443	Open in IMG/M
3300029953\|Ga0311343_10334418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1443	Open in IMG/M
3300029953\|Ga0311343_11266532	Not Available	558	Open in IMG/M
3300029999\|Ga0311339_11653173	Not Available	563	Open in IMG/M
3300030007\|Ga0311338_10882817	Not Available	881	Open in IMG/M
3300030007\|Ga0311338_10882817	Not Available	881	Open in IMG/M
3300030007\|Ga0311338_11447070	Not Available	637	Open in IMG/M
3300030020\|Ga0311344_10688239	Not Available	856	Open in IMG/M
3300030520\|Ga0311372_10366130	Not Available	2214	Open in IMG/M
3300030520\|Ga0311372_11226656	Not Available	957	Open in IMG/M
3300030520\|Ga0311372_12021588	Not Available	674	Open in IMG/M
3300030580\|Ga0311355_11066099	Not Available	722	Open in IMG/M
3300030626\|Ga0210291_10833125	Not Available	624	Open in IMG/M
3300030740\|Ga0265460_10137658	Not Available	1275	Open in IMG/M
3300030740\|Ga0265460_11836884	Not Available	623	Open in IMG/M
3300030743\|Ga0265461_10026823	Not Available	1796	Open in IMG/M
3300030743\|Ga0265461_11593341	Not Available	714	Open in IMG/M
3300030743\|Ga0265461_11593341	Not Available	714	Open in IMG/M
3300030743\|Ga0265461_12515889	Not Available	607	Open in IMG/M
3300030743\|Ga0265461_13671211	Not Available	521	Open in IMG/M
3300030813\|Ga0265750_1095034	Not Available	513	Open in IMG/M
3300030874\|Ga0265742_1012737	Not Available	658	Open in IMG/M
3300030878\|Ga0265770_1001461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3242	Open in IMG/M
3300030923\|Ga0138296_1896307	Not Available	1172	Open in IMG/M
3300031234\|Ga0302325_10358766	Not Available	2308	Open in IMG/M
3300031234\|Ga0302325_12711062	Not Available	584	Open in IMG/M
3300031236\|Ga0302324_101439113	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	899	Open in IMG/M
3300031249\|Ga0265339_10249885	Not Available	858	Open in IMG/M
3300031525\|Ga0302326_11410981	Not Available	940	Open in IMG/M
3300031708\|Ga0310686_101333372	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_45_15b	1597	Open in IMG/M
3300031708\|Ga0310686_101704102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1135	Open in IMG/M
3300031708\|Ga0310686_102507989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	5640	Open in IMG/M
3300031708\|Ga0310686_110293464	Not Available	1353	Open in IMG/M
3300031715\|Ga0307476_10109548	Not Available	1956	Open in IMG/M
3300031715\|Ga0307476_10362402	Not Available	1068	Open in IMG/M
3300031718\|Ga0307474_10072035	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2566	Open in IMG/M
3300031718\|Ga0307474_11053642	Not Available	644	Open in IMG/M
3300034125\|Ga0370484_0190267	Not Available	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.68%
Host-Associated	Host-Associated	6.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.21%
Aquatic	Environmental → Aquatic	7.47%
Plants	Host-Associated → Plants	6.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.69%
Peat	Environmental → Terrestrial → Peat	14.94%
Freshwater	Environmental → Aquatic → Freshwater	6.32%
Peat Moss	Host-Associated → Plants → Peat Moss	4.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.57%
Sediment	Environmental → Aquatic → Sediment	0.57%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.05%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.47%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.32%
Loam	Environmental → Terrestrial → Soil → Loam	5.17%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	4.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.15%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.57%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.60%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	4.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.30%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.15%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.57%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.63%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.32%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.17%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	4.60%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.02%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.45%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.30%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.30%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.72%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.72%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.15%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.15%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.15%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.57%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.57%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.57%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.57%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.57%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.57%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.57%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.57%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.57%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.57%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.57%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027176	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030874	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102130551	3300000567	Peatlands Soil	VGSLPDHAPEALHEVALVDDHVNVALPPLVIELGLAARATIGVGGVTETVADCDALPPVPVQARV*
JGIcombinedJ26739_1007629772	3300002245	Forest Soil	LAPDHAPDATQDVALVADQVNMELLPLATVLGPADRVTVGAGVVTETVADWVALPPLPVQLRM*
JGIcombinedJ26739_1007629773	3300002245	Forest Soil	LAVSAPVGCDPLTGLVPDQDPEAVHAVAFVADQLSVAPLPLATVLGLAARLMVGTGWVTETVADCEAALPPAPVQVSV*
Ga0062385_107245101	3300004080	Bog Forest Soil	CEPLTGWFPDQPPEAEQDEAFVADQVSVALLPLTTVLGLAPIVTTGAGAVTETVADCEELAPGPVQVN*
Ga0062384_1007954852	3300004082	Bog Forest Soil	VALAVSAPVDCEPVTALAPDQAPVPVQAVALVADQLNVEPPPLATVLGLAANVMVGTGWVTVTVADCAALPPLPVQVRV*
Ga0062387_1003099302	3300004091	Bog Forest Soil	VSAPVACEPLTALVPTQAPEALQEVALTADQVKVDPLPLATVLGLAESVTVGAGEVTDTVAD*
Ga0062389_1000153844	3300004092	Bog Forest Soil	VSAPVACEPLTALVPTQAPEALQEVALMADQVKVDPLPLATVLGLAESVTVGAGEVTDTVAD*
Ga0062386_1000396655	3300004152	Bog Forest Soil	LEPDHPPEAAHQEALVDDQFSVELPPLATVPGLALNVTTGGGAATVTVTDCVAEPPSPVQVSV*
Ga0062388_1003795513	3300004635	Bog Forest Soil	LAVSAPVDCEPVTALAPDQAPVPVQAVALVADQLNVEPPPLATVLGLAANVMVGTGWVTVTVADCAALPPLPVQVRV*
Ga0066789_100850195	3300005994	Soil	LAVSAPVDCEPLKPLLPDQSPEAVHEVALAADHVNVELPPLATVLGLAVRVTVGAGCVTDTVADCDALPPVPVQVRV*
Ga0066790_104321142	3300005995	Soil	LAVSAPVDCEPLKPLLPDQSPEAVHEVALVADHVNVALPPLATVLGLAVKLTVGAGCVTDTVADCDALPPVPAQVRV*
Ga0075017_1010311453	3300006059	Watersheds	VSAVSAPVDCDPLVALLPLQSPDAAQEVALVDDHDSVELPPLATLPGLALKLTVSAGAVTVTVADCAALPPAPVQVRV*
Ga0070765_1002522507	3300006176	Soil	PVLCEPLTALVPDQDPEAVQAVAFFADQVSAALPPLATVLGLAARVTVGTGCVTETVADCAALLPPAPAQVRV*
Ga0073928_1000209834	3300006893	Iron-Sulfur Acid Spring	VPDQPPEAVQAVALVADQLSVLALPLATLLGPAESVTVGAGCDTDTVTDCEALLPLEPVQVRV*
Ga0105240_100741035	3300009093	Corn Rhizosphere	VALAVSAPVDCEPLTGLVPDQPPEAVQEVALVEVHVNVELPPLATVLGLAPRLTVAVFFGLTVTFVDWAAVPPSPLQLKL*
Ga0116229_103127032	3300009500	Host-Associated	VAAEPLVALLPDQAPVAVQAVAFVEVQASVELPPLATVLGLAVKLTVGVGDVTETVADCAALPPAPTQVRV*
Ga0116229_103949332	3300009500	Host-Associated	VAAEPLVALLPDQAPVAVQAVAFVEAQASVELPPLATVLGLAVKLTVGVGDVTETVADCAALPPAPTQVRV*
Ga0116229_111718031	3300009500	Host-Associated	VLTEPVVGSAPLQPPEAVQEVALVDDHANVVFAPLAIVVAVAAKVTVGAGLVTVTVADCAALPPVPVQDIP*
Ga0116229_115444502	3300009500	Host-Associated	VAERAPVDCEPLVALAPDQAPTATHDVALVADQVRVEVPPLTTVLGVAVRVTAGAAALTDTLADWVALPPAPVQVNV*
Ga0116218_12602282	3300009522	Peatlands Soil	VDCEPLKPLLPDQSPEAVHEVALVADHVNVALPPLATVLGPAVKVTVGAGCVTDTVADCDALPPVPVQVSV*
Ga0116218_12602283	3300009522	Peatlands Soil	VDCEPLKPLLPDQAPDALQAVAFVDDQASVELAPLAIVLGLALRFTVGVGGVTDTVTDCDALPPIPVQVRV*
Ga0116218_12746642	3300009522	Peatlands Soil	VVVALSAPVDCDPLVAKVPDQPPEAAQEVAFVDVQLKVEVAPLATVLGLALSVTVGAGVVTVTVADCAALPPLPVQVRV*
Ga0116125_11459572	3300009628	Peatland	VDCEPLTAFAPDQAPDAVHAVAWVEDQVRVDFPPLATELGLALRVMLGAGCVTDTVVDCTALAPLPLQVNVYV
Ga0116129_12224542	3300009633	Peatland	VDCEPLVPLVPDQDPDAVQEVAFVADQFSVELPPLATVLGLADKVTTGAGGVTETVADWFALPPPPEQASA*
Ga0105854_12768101	3300009660	Permafrost Soil	VDWEPLVGSLPDHAPEALHEVALVDDHVNVALPPLVIELGLAARATVGVGDVTETVADCEALPPVPVQARV*
Ga0116227_104302524	3300009709	Host-Associated	VDTEPLVASLPDQAPVAVQEVAFVEVHASVELAPLATVLGLAAKVTVGVGDVTETVADCAALPPAPIQVRV*
Ga0074045_100973145	3300010341	Bog Forest Soil	LLPDHAPDAEHAVALLLDQVSVELVPLVMVLGPALRLTEGAFGVTETVADWEADPPLPVQVNV*
Ga0074045_105867282	3300010341	Bog Forest Soil	VDWEPLVGSLPDHAPEALHEVALVDDHVNVALPPLVIELGLAARVTVGVGGVTETVADCDALPPVPVQVRV*
Ga0136449_1004237511	3300010379	Peatlands Soil	VLWEPLLASLPDQPPDAAHEVALVEDHVNIELPPLVTVLGLAVKLTVGAGDVTETVADCAALPPAPLQVSV*
Ga0136449_1043831782	3300010379	Peatlands Soil	VSAPVACEPLLEWLPAQAPEAAQEVALVDVHVNVDPLPLVTVLGLAAKVRIGDGAVTDTVVDCVALPPVPVQVNV*
Ga0134126_103233297	3300010396	Terrestrial Soil	VDWEPLTGLVPDQPPEAVQEVALVEVQVNVELPPLATVLGLAPRLTVAVFFGLTVTFVDWAAVPPSPLQLKL*
Ga0126359_14202332	3300010869	Boreal Forest Soil	LAVSAPVLCDPLTGLAPDQDPAAVQAVALVADQVSVELLPLATVLGLAARLMVGTGWVTETVADCAALLPPVPLQVRV*
Ga0137413_104199314	3300012924	Vadose Zone Soil	VPDHPPEAVHEVALLADHVRAELPPLVTVLGLALMLTVAVGCALTVTVTAWVALPPLPVQLNA*
Ga0137416_101631034	3300012927	Vadose Zone Soil	VPDQPPEAVQAVALVADQLSVLALPLATLLGLAESVTVGAGCDMDTVTDCEALLPPEPVQVRV*
Ga0137404_105820461	3300012929	Vadose Zone Soil	LAPDQPPDAVQAVALVDDHDNIELPPLATVLGLAATFTVGEGWVTDTVADCAALPPVPLQLSVYVAFAVSAPVDAEP
Ga0137407_121255142	3300012930	Vadose Zone Soil	VPDHPPEAVHEVALVADHVRAELPPLVTVLGLALMLTAAVGCALTVTVTDWVALPPLPVQLNA*
Ga0137410_101237202	3300012944	Vadose Zone Soil	LEPFSGWLPDQPPEAVQEVALVEDQVKVELPPLATVLGFALRLTVALCFGLTVTVVDWTALPPVPLQVNE*
Ga0182013_1001202514	3300014492	Bog	VALALNAPVDCVPLTDLPPDQAPEAVQEVALVDVQVRLEVPPFATVLGLAESVTTGAGWVTDTVAD*
Ga0182015_100920235	3300014495	Palsa	LLPAQPPEAVQVVAWVLDQVSVELLPLAIVLGLAARVIVGAGAVAVTATAADCVALPPAPAQVST*
Ga0182024_118094461	3300014501	Permafrost	MVPDQAPDAEQVVALVADQLNVELLPLATVLGLAASVTVGAEEVTDTVAD*
Ga0137414_11831593	3300015051	Vadose Zone Soil	VPDHPPEAVHEVALAADHVRVELPPLVTVLGLALMLTVAVGCALTVTVTAWVALPPLPVQLNA*
Ga0137414_11831595	3300015051	Vadose Zone Soil	VPAGAIVPLQPSDATQEVALVEDHVNVDVPPLATVVGLAVRVTVGAGAVTVTVVDCAALPPLPVQVNM*
Ga0167644_10207025	3300015206	Glacier Forefield Soil	LAVSAPVDCEPLTALAPDQDPEAVQAVASVVDQVRVELLPLATVLGLVARVMVGTGCVTETVADCAALPPPVPVQLRV*
Ga0167644_10644292	3300015206	Glacier Forefield Soil	LLAVSAPVDSEPPVAPLAPDQAPDAIQDVAWVADQVSMELLPLATVLGLAEKLTVGAGVVTETVADWVALPPLPVQLRV*
Ga0187778_110538041	3300017961	Tropical Peatland	VAFAVSAPVDCEPLVGSLPAQEPEAVHEVALVDDHVNVELFPLTTVLGLAVNVVVGAGGVTDTVVDC
Ga0187863_104504412	3300018034	Peatland	LALRAPVDCDPLVAWLPDQDPEAAHEVALVEDHVRVAALPLVTVLGLALRVTVGGSDVTVTVADCAALPPVPVQVNVYVVFALSAPVDCDPLVALL
Ga0193729_12369732	3300019887	Soil	LAVSAPVDCDPLRALVPDHPPEAVHEVALVADHVRVELPPLVTVLGLALMLTVAVGCALTVTVTDWVALPPLPVQLNA
Ga0193755_10038453	3300020004	Soil	VPDHPPEAVQEVALLADHVRVELPPLVTVLGLALMLTVAVGFALTVTVTDWVALPPLPVQLNV
Ga0193726_10976054	3300020021	Soil	VFAVSAPVDWEPETPLVPVQPPLAVQAVALVADQVKVALLPLATVLGLLAKLIVGAAALTDTVADCAAVPPWPVQVSV
Ga0193726_11221951	3300020021	Soil	DCDPLSALAPDHPPEAVHEVALADDHVRLELPPLVTVLGLALMLTVAVGFALTVTVADWVALPPLPVQLNV
Ga0210407_105356312	3300020579	Soil	LAVSAPVVCDPLTALVPDQPPDAAQVVALVADQVSVELLPLATVLGLAARLMVGTGCVTETVADCTALPPVPVQVCV
Ga0210407_106112703	3300020579	Soil	LAVSAPVVCDPFSGMAPAQDPEAVHAVALFADQVSVELLPLATVLGLAARLMVGAGAVTETVADC
Ga0210403_102783734	3300020580	Soil	VSAPVLCDPLTGLAPDQDPEAVQAVALVAAQVSAELLPLATVLGLAARLMVGTGCVTETVADCAALLPPVPVQVRV
Ga0210399_110165773	3300020581	Soil	LAVSAPVVCDPLSGSAPDQDPEAVQAVALVADQVSVELLPLATVLGLATRLMVGAGCVTVTVADCA
Ga0210395_101198604	3300020582	Soil	LAVSAPVDCEPVAALAPDQAPDAVQAVALVADQVSVELLPLATVLGLAEKVMVGTGCVTDTVADCAALPPLPVQLRVYVAFAVSAPVD
Ga0210395_101198605	3300020582	Soil	VSALAPDQDPEAVQAVALVADQVSAELLPLATVLGLATRLTVGTGCVTETVADCTALPPLPVQLRV
Ga0210395_101198606	3300020582	Soil	LAVSAPVVCDPLTALAPDHDPEAVQAVALVADQVSVELLPLATVLGFAARLMVGTGCVTDTVADCAALPPVPVQVSV
Ga0210401_103968632	3300020583	Soil	VECDPLVASLPLQPPEAVQEVAFLDDQDKVELLPLAMVLGLALKLTVGAGEVTVTVADCAALPPAPVQVSV
Ga0210406_103129034	3300021168	Soil	VSAPVVCDPFSGMAPAQDPEAVHAVALFADQVSVELLPLATVLGLAARLMVGAGAVTETVVDCVALPPVPEQLRV
Ga0210405_108891052	3300021171	Soil	VSAPVDCVPVSALAPDQDPEAVQAVALVADQVSVELLPLATVLGLAARLMVGTGCVTETVADCAALPPLPVQLRV
Ga0210396_102639531	3300021180	Soil	VECDPLVASLPLQPPEALQDVAFLDDQDSVELLPLATVLGLAVKLTVGAGEVTVTVADCAALPPA
Ga0210396_107252123	3300021180	Soil	VVCDPLTGRAPDQDPEAVQAVALLADQVNVALLPLATVLGLAARLMVGTGCVTETVADCAALLPPVPVHVRV
Ga0210388_100035942	3300021181	Soil	LAVSAPVGCDPLTGLVPDQDPEAVHAVAFVADQLSVAPLPLATVLGLAARLMVGTGWVTETVADCEAALPPAPVQVSV
Ga0210388_100373006	3300021181	Soil	LAVSAPVDCDPETGLLPDQDPDALQAVALVADQVNVALLPLATVLGLAERLMVGTGCVTETVADCDAELPPAPLQLSV
Ga0210388_103361881	3300021181	Soil	VPVSALAPDQDPEAVQAVALVADQVSAELLPLATVLGLAARLMVGTGCVTETVADC
Ga0210388_103361882	3300021181	Soil	LAVSAPVVCDPLTALAPDQDPEAVQAVALVADQVSAELLPLATVLGLAARLMVGTGCVTETVADCAALPPVPVQVSV
Ga0210388_111699312	3300021181	Soil	LTPLGPDQDPEAVQAVALVAVQVSIALLPLATVLGLAAKVMVGTGWVTVIVVDCDALLPPLPVHAMV
Ga0210385_100558726	3300021402	Soil	LAVSAPVDCDPETGLLPDQDPDAVQAVALVADQVNVALLPLATVLGLAERLMVGTGCVTETVADCDAELPPAPLQVSV
Ga0210397_111667561	3300021403	Soil	DQAPDAVQDVALLADHVNVELLPLATVLGLAAKLRVGVGCVTDTVADCAALPPAPLQVSI
Ga0210389_100072261	3300021404	Soil	APDQDPAAVQAVALVADQVSVELLPLATVLGLAARVTVGTGCVTETVAVCAALLPPVPVQVRV
Ga0210387_1000101010	3300021405	Soil	VAALAPDHAPDATQDVALVADQVNMELLPLATVLGPADRVTVGAGVVTETVADWVALPPLPVQLRM
Ga0210387_102229752	3300021405	Soil	VSAPVDSEPPVAALAPDQAPDAIQDVAWVADQDSMEPLPLATVLGLAEKLTVGAGVVTETVADWAALPPLPVQLSV
Ga0210387_103774243	3300021405	Soil	LAVSAPVDCEPLMGLEPDQDPEAVHAVALVADQVRAALLPLATVLGLVARVMVGTGCVTETVADCAALPPPVPVQLRV
Ga0210387_103774244	3300021405	Soil	LLAVSVPVVCEPPVAALAPDQAPDAIQDVAWVADQVSMALLPLATVLGPANKLTVGAGVVTDTVADWAAVPPVPVQVRV
Ga0210386_101218741	3300021406	Soil	VPDQPPEAVQAVALVADQLSVLALPLATLLGPAESVTVGAGCDTDTVTDCEALLPPEPVQVRV
Ga0210383_101120094	3300021407	Soil	VDCEPVTALAPDQAPDAVQAVALVADQVSVELLPLATVLGLAEKVMVGTGCVTDTVADCAALPPLPVQLRVYVAFAVSAPVD
Ga0210383_110659542	3300021407	Soil	VDCVPVSALAPDQDPEAVQAVALLADQVSAELLPLATVLGLATRLMVGTGCVTETVADCAALPPVPVQVSV
Ga0210383_110659543	3300021407	Soil	SALAPDQDPAAVQEVALVADQVSAELLPLATVLGLAARLMVGTGCVTETVADCAALPPVPVQASV
Ga0210394_1000065520	3300021420	Soil	VNLVVAEIAAVLWEPLIGSLPDQPPDAVQEVALVEDHVSVELLPLFTVLGLAVRVTAGAGEVTDTVATCTTLLPLPLPLQVRV
Ga0210394_112832043	3300021420	Soil	LAVSAPVVCDPFSGMAPAQDPEAVHAVALFADQVSVELLPLATVLGLAARLMVGAGAVTETVTDCVALPPVPEQLRV
Ga0210391_100473067	3300021433	Soil	LVLNAPVDCDPATGLVPDQDPEAVHAVALAADHVSVALLPLATVLGPAARLMVGTGWVTETVADCAAALPPVPLQVSV
Ga0210391_100473068	3300021433	Soil	LAPDQAPDAKQDIALVADQVKAELLPLATVLGAADKVTVGAGVVTETVADWVALPPPPVQLRM
Ga0210391_102716545	3300021433	Soil	PDQDPEAVQAVALVADQVSAELLPLATVLGLATRLMVGTGCVTETVADCAALPPVPVQVS
Ga0210391_108900992	3300021433	Soil	LVVAEIAAVLWEPLIGSLPDQPPDAVQEVALVEDHVSVELLPLFTVLGLAVRVTAGAGEVTDTVATCTTLLPLPLPLQVRV
Ga0210391_113050901	3300021433	Soil	VPDQDPEAVHAVALVADQLSVALLPLATVLGLAARLMVGTGWVTETVADCEAALPPAPVQVSV
Ga0210390_109913731	3300021474	Soil	LAVSAPEVCDPLTALAPDHDPEAVQAVALVADQVSVELLPLATVLGFAARLMVGTGCVTDTVADCAALPPVPVQVSV
Ga0210390_109913732	3300021474	Soil	LAPDHDPEAVQAVALVADQVSAELLPLATVLGLATRLTVGTGCVTETVADCTALPPLPVQLRV
Ga0210398_109521303	3300021477	Soil	LTGLVPDQDPEAVHAVAFVADQLSVAPLPLATVLGLAARLMVGTGWVTETVADCEAALPPAPVQVSV
Ga0210402_105352365	3300021478	Soil	DHAPEAVQEVALVDDQVRAELLPLATVLGLATKLMVGTGCVTVTVADCAALPPVPVQVRV
Ga0210402_113350701	3300021478	Soil	LAVRAPVVCDPLSGLAPAQDPEAVQDVALVADQVSAELLPLATVLGLATKLMVGTGCVTVTVADCAALPPL
Ga0210402_113350702	3300021478	Soil	LAVSAPVVCDPLSGLAPAQDPEAVQAVALVVDQVSVELLPLATVLGLAARLMVGTGCVTETVADCVADPPAPVQLRV
Ga0210409_101793247	3300021559	Soil	LAVSAPVVCDPLSGSAPDQDPEAVQAVALVADQVSVELLPLATVLGLATRLMVGAGCVTVTVADCAALPPLPVQLSV
Ga0210409_105113461	3300021559	Soil	AQDPEAVQAVALVVDQVSVELLPLATVLGLAARLMVGTGCVTETVADCVADPPAPVQLRV
Ga0210409_105113462	3300021559	Soil	LAVRAPVVCDPLSGLAPAQDPEAVQDVALVADQVSAELLPLATVLGLATKLMVGTGCVTVTVADCAALPPLPVQLRA
Ga0210409_105113463	3300021559	Soil	LAVSAPVVWDPVSALAPDQDPEAVQAVALVADQVSVELLPLATVLGLATKLMVGTGCVTVTVADCAALPPVPVQVRV
Ga0210409_108051023	3300021559	Soil	LAVSAPVVCDPLSGLAPAQDPEAVQAVALVVDQVSVELLPLATVLGLAARLMVGTGCVRETVA
Ga0210409_112481743	3300021559	Soil	VSAPVVCDPLTGRAPDQDPEAVQAVALVADQVNVALLPLATVLGLAARLMVGTGCVTETVADCAALLPPVPVHVRV
Ga0210409_113622482	3300021559	Soil	LAPDQDPEAVQAVALLADQVSAELLPLATVLGLATRLTVGTGCVTETVADCTALPPLPVQLRV
Ga0242641_10510921	3300022499	Soil	PVTALAPDQDPAAVQAVALVADQVSAELLPLATVLGLAARLMVGTGCVTETVADCAALPPVQVQVSV
Ga0242662_100877051	3300022533	Soil	PVPRRASVPLAVSAPVVWDPLSGLAPDQDPEAVQGVALVADQVSVELLPLATVLGLATKLMVGTGCVTVTVADCAALPPLPVQLRV
Ga0242662_100877052	3300022533	Soil	LAVSAPVVCDPLSGLAPDQDPEAVQAVALVDDQVRAELLPLAIVLGIATRLMVGTGCVTVTVADCAALPPVPVQVRV
Ga0242665_101452272	3300022724	Soil	LAVSAPVVWDPVSALAPDQDPEAVQAVALVADQVSVELLPLATVLGLATRLMVGTGCVTVTVADCAALPPVPVQVRV
Ga0242665_101452273	3300022724	Soil	VWDPVSALAPDQDPEAVQAVALVADQVSVELLPLATVLGLATKLMVGTGCVTVTVADCAALPPLPVQLRA
Ga0224557_11018602	3300023101	Soil	LALNAPVDCVPLTDLPPDQAPEAVQEVALVDVQVRLEVPPFATVLGLAESVTTGAGWVTDTVAD
Ga0208193_10518613	3300025463	Peatland	MDCEPLADLVPDQEPEAVQEVAFVADHVRVELPPLATVLGLADKVTTGAGGVTETVVDCVALAPLPVQVSV
Ga0208220_11807731	3300025627	Arctic Peat Soil	LAVSAAVLCDPLTGLAPDQDPEAVQAVALVADQVNVALLPLATVLGLAARLMVGTGCVTETVADCAAELPPVPVQVSV
Ga0208220_11807732	3300025627	Arctic Peat Soil	VAALAPDQGPDAVQDVALVADQLSVELLPLATVLGPADKVTAGAGVVTETVADWVALPPLPVQFRM
Ga0208589_11317981	3300025634	Arctic Peat Soil	LAVSAPVDCDPITALVPDQLPEAVQEVAWVADQINVEPVPLATVLGLAVKVIAGAGEVTETVVDCRALPPLPVQLSP
Ga0209871_10999613	3300026217	Permafrost Soil	IELTPEGLLLTETAPGVTPEAVQEVALMAYQVSVELLPLATVLGLAVKVTVGEGAVTDTVADCVALPPLPVQVSP
Ga0209890_101007054	3300026291	Soil	VDCEPLKPLLPDQSPEAVHEVALAADHVNVELPPLATVLGLAVRVTVGAGCVTDTVADCDALPPVPVQVRV
Ga0209839_102937521	3300026294	Soil	LAVSAPVDCEPLKPLLPDQSPEAVHEVALVADHVNVELPPLATVLGLAVKLTVGAGCVTDTVAD
Ga0209647_11454214	3300026319	Grasslands Soil	PDQAPAAAHDAALADDHVKVEPLPPATVPGLAVKVTVGAGEVTDTVAACVALPPAPVQVR
Ga0208992_10605462	3300027176	Forest Soil	MVPDQAPEAVQAVALVTTHASVELSPLVTVLGDAVRLMAAAGLALTVTVVACEALPPLPVQVRP
Ga0209222_10103162	3300027559	Forest Soil	VDCEPLVALVPDHPPDAVHEVALVAAQVSVELAPLATVLGPADKVTTGAGALTETVVDCVALAPLPVQVSV
Ga0209222_10470943	3300027559	Forest Soil	AFRAPVDCEPLVALVPDQPPEAVQVVALLADQAKTALLPLAIVLGLADKATVGAGEVTDTVFVCVTLPPVPVQVSE
Ga0208042_10770553	3300027568	Peatlands Soil	VGSLPDHAPEALHEVALVDDHVNVALPPLVIELGLAARATIGVGGVTETVADCDALPPVPVQARV
Ga0209773_102664911	3300027829	Bog Forest Soil	VSAPVACEPLTALVPTQAPEALQEVALTADQVKVDPLPLATVLGLAESVTVGAGEVTDTV
Ga0209611_101450175	3300027860	Host-Associated	LSAPVDTEPLVASLPDQAPVAVHEVAFVEVHASVELAPLATVLGLAAKVTVGVGDVTETVADCAALPPVPTQVRV
Ga0209611_101847302	3300027860	Host-Associated	LRAPVAAEPLVALLPDQAPVAVQAVAFVEVQASVELPPLATVLGLAVKLTVGVGDVTETVADCAALPPAPTQVRV
Ga0209611_103862251	3300027860	Host-Associated	QAPVAVQAVAFVEVQASVELPPLATVLGLAVKLTVGVGDVTETVADCAALPPAPTQVRV
Ga0209169_100134189	3300027879	Soil	LAVSAPVDCDPETGLLPDQDPDALQAVALVADQVNVALLPLATVLGLAERLMVGTGCVTETVADCDAELPPAPLQVSV
Ga0209415_1000963819	3300027905	Peatlands Soil	VDCEPLKPLLPDQSPEAVHEVALVADHVNVALPPLATVLGPAVKVTVGAGCVTDTVADCDALPPVPVQVSV
Ga0209006_108178731	3300027908	Forest Soil	PVGALVPDQVPDAMQEVALVADQVSMEPLPLATVLGLADKLTVGAGVVTETVADWAALPPLPVQLRV
Ga0302219_104157542	3300028747	Palsa	LALSAPVDCEPLTALAPDHAPDAAQEVALVADQFNVELPPPATVLGLAASVTVGAEEVTVMVADCTALPPVPVQESV
Ga0302228_104493181	3300028808	Palsa	DPLAALVPVQAPDAVQVVEFVADQVRVEPLPLATVLGLAAKVTAGAGAVTETVEDCEALPPVPVQVSV
Ga0308309_106857581	3300028906	Soil	PVLCEPLTALVPDQDPEAVQAVAFFADQVSAALPPLATVLGLAARVTVGTGCVTETVADCAALLPPAPAQVRV
Ga0311352_103614632	3300029944	Palsa	VPVQAPDAVQVVEFVADQVRVEPLPLATVLGLAAKVTAGAGAVTETVEDCEALPPVPVQVSV
Ga0311371_104700712	3300029951	Palsa	VDCEPLVALVPDQPPEAVQEVALVADQFKVELPPLATVLGLAAKVTVGAGEVTVTVADWAALPPLPVQVNP
Ga0311343_103344185	3300029953	Bog	LSAPVERDPLVAWLPLQPPEAAQEVALVDDQDSVELAPLAIVLGLALTLTVGAGEVTVTVDDCAALPPAPEQVRV
Ga0311343_103344186	3300029953	Bog	VVLLLRAPVERDPLVAWLPLQPPEAVQEVALVDDQDRVELAPLVIVLGLAFRLTVAVGV
Ga0311343_112665321	3300029953	Bog	VECDPLVVWLPLQPPEATQDVALVEDQERVELVPLAIVLGLALKLTDAVGVAVTVTVEDCTARPPAPSQTSV
Ga0311331_105889173	3300029954	Bog	VVLLLRAPVERDPLVAWLPLQPPEAVQEVALVDDQDRVELAPLVIVLGLAFRLTVAVGVAVTVTVAD
Ga0311339_116531732	3300029999	Palsa	LALSAPVDCEPLTALAPDHAPDAAQEVALVADQFNVELPPPATVLGLTASVTVGAEEVTVMVADCTALPPVPVQESV
Ga0311338_108828172	3300030007	Palsa	VACEPLTALVPAQAPEAAQEVALVADQVNVDPLPLATVLGLAPSVTVGAGAVTETVADCVALPPLPVQVIP
Ga0311338_108828173	3300030007	Palsa	VDCEPLVALVPDQPPEAVQEVALVADQVKVELPPLATVLGLAAKVTVGAGEVTVTVADWAALPPLPVQVNP
Ga0311338_114470702	3300030007	Palsa	VACDPLVASLPLHPPEAVQEVAFLDDQDRVEPLPLAMVLGLALKLTVGAGEVTVTVADCEALPPVP
Ga0311344_106882391	3300030020	Bog	LSAPVERDPLVAWLPLQPPEAAQEVALVDDQDSVELAPLAIVLGLALTLTVGAGEVTVTVDDCAALPPAPEQV
Ga0310037_103449541	3300030494	Peatlands Soil	PDQAPDALQAVAFVDDQASVELAPLAIVLGLALRFTVGVGGVTDTVTDCDALPPIPVQVR
Ga0311372_103661301	3300030520	Palsa	PVDCEPLTALAPDHAPDAAQEVALVADQFNVELPPPATVLGLAASVTVGAEEVTVMVADCTALPPVPVQESV
Ga0311372_112266563	3300030520	Palsa	VACEPLTALVPAQAPEAAQEVALVADQVNVDPLPLATVLGLAPSATVGAGAVTETVADCVALPPLPVQVIP
Ga0311372_120215882	3300030520	Palsa	VDCEPLVALLPDHPPDAVHEVALVADQVSVELPPLATVLGLADKVTTGAGALTETVVDCVALAPLPVQVSV
Ga0311355_101463075	3300030580	Palsa	VACDPLVASLPLHPPEAVQEVAFLDDQDRVEPLPLAMVLGLALKLTVGAGEVTVTVADCEALPPVPVQA
Ga0311355_110660992	3300030580	Palsa	VECEPLVASAPVQPPDAVQAVAFVDVQDRVELAPLAMVLGLVLKLTVGAAEVTVTVADCAALPPVPVQVN
Ga0311355_116338422	3300030580	Palsa	VPLHPPDAVQEVALAADQVSVDAEPLVTVLGAAFKVTTGAGEVTVTVAD
Ga0311356_119498421	3300030617	Palsa	LALSAPVDCEPLTALAPDHAPDAAQEVALVADQFNVELPPPATVLGLAASVTVGAEE
Ga0210291_108331252	3300030626	Soil	LSGLAPDQDPEAVQAVALVADQVSVELLPLATVLGLAKRLMFGAGCVTDTVADCAALPPLPVQVRA
Ga0265460_101376583	3300030740	Soil	LAVSAPVVCDPLTGLAPDHDPEAVQAVALVADQVSVELLPLATVLGLAARLMVGAGCVTETVADCAALPPVPVQVSA
Ga0265460_118368843	3300030740	Soil	PPVAALAPDHALDAIQDVALVADQVSMEPLPLATVLGAAEKVTAGAGVVTETVADWVALPPLPVQLRM
Ga0265461_100268234	3300030743	Soil	LAPDQEPEALQAVALVADQVKVELPPLATVLGLAARRTVGTGCDTETVADCAALLPLLPV
Ga0265461_115933412	3300030743	Soil	LAVSAPVLCEPLAALVPDQDPEAVQAVALAADQVSVEAPPFATVLGLAARAIVGTGCVTETVADCDAVVPPLPVQVIV
Ga0265461_115933413	3300030743	Soil	VSAPVDFEPAVAAMAPVHAPDAVHEVAFVAVQLTMELLPLVTVLGLADKVTVGVGVVTETVADCEAVPPLPVQLSV
Ga0265461_125158892	3300030743	Soil	VVCDPLAGLVPDQDPEAVQAVELVADQVSVAPLPLATVLGLAVRLMVGTGCVTETVADCDALLPPVPLQVSV
Ga0265461_136712111	3300030743	Soil	PEAVQAVALLADHVRVALLPRATVLGLATRLTVGTGCVTETVADCDALLPPLPAQVSVYVAFTVSAPVD
Ga0265750_10950341	3300030813	Soil	LAVSAPVDCDPLTGMAPDQDPEAVQAVALLADHVRVALLPLATVLGLATRLTVGTGCVTETVADCD
Ga0265742_10127373	3300030874	Soil	VDCEPLTGLVPDHAPEAAHAVALVADQFNVELPPLAIALGPTLRMTLGAGDFTVTVAVCTALPPGPVQVNI
Ga0265770_10014616	3300030878	Soil	LAVSAPVDCDPLTGMAPDQDPEAVQAVALLADHVRVALLPLATVLGLATRLTVGTGCVTETVADCDALLPPVPAQVSV
Ga0138296_18963071	3300030923	Soil	DWEPLVALLPDQPPEAVQAVALLETQLKVELPPLAIVLGLALMLTVAVGVALTETVADCAALPPEPVQLIV
Ga0302325_103587661	3300031234	Palsa	WLALSAPVDCEPLTALAPDHAPDAAQEVALVADQFNVELPPPATVLGLTASVTVGAEEVTVMVADCTALPPVPVQESV
Ga0302325_127110622	3300031234	Palsa	VACEPLVALAPDQPPEPVHAVALVVDHDRVELLPLVTVLGLAVKVTVGAGAATDTVADCVALPPLPVQVSP
Ga0302324_1014391133	3300031236	Palsa	VACEPLVALAPDQPPEPVHAVALVVDHDRVELLPLVTVLGLAVKVTVGAGAATDTVADCVALPPL
Ga0302324_1025309351	3300031236	Palsa	VDCEPLVALVPDQPPEAVQEVALVADQFKVELPPLATVLGLAAKVTVGAGEVTVTVADW
Ga0265339_102498852	3300031249	Rhizosphere	VDCEPLVALAPDQLPVAVHAVALVDDHVNVELAPLTTELGAAARETVGAGAFTETVVDCDVLPPLPVQVRP
Ga0302326_114109811	3300031525	Palsa	LALSAPVDCEPLTARAPDQAPDAAQEVALVADQLNVELPPPATVLGLAASVTVGAEEVTVMVADWTALPPVPVQESV
Ga0310686_1013333723	3300031708	Soil	VECDPLVASLPLQPPEAVQDVAFLDDQDSVELLPLATVLGLALKLTVGAGEVTVTVADCAALPPAPVQVSV
Ga0310686_1017041024	3300031708	Soil	PEAAHEVAFVADHVRVALPPLATVLGLDTRLTVGTGCVTETVADCDALLPPVPVQASV
Ga0310686_1025079893	3300031708	Soil	LAVSAPVDCDPLTGLVPDQEPEAVQAVALVADQVRAALLPLATVLGFAARLMVGTGCVTDTVADCAALPPPLPVHVNV
Ga0310686_1102934645	3300031708	Soil	VTDLVPDQDPEAVQAVALVADQVSVELLPLATVLGLAARLMVGTGCVTETVADCAALLPPVPVQVSV
Ga0265314_104143823	3300031711	Rhizosphere	PDQPPEAVHEVALVELQLRVELPPNATVVGLALKLTVGAGDVVTVTVAVWGVLLPPAPVQVSV
Ga0307476_101095483	3300031715	Hardwood Forest Soil	LAVSAPVDCDPLTGMEPDQDPEAVQAVALLADHVRVALLPLTTVLGLATRLTVGTGCVTETVADCDALLPPLPAQVSVYVAFAVSAPVD
Ga0307476_103624021	3300031715	Hardwood Forest Soil	LVPDQDPEAVHAVALVADQLSVAPLPLATVLGLAERLMVGTGWVTETVADCDAALPPAPVQVSV
Ga0307474_100720354	3300031718	Hardwood Forest Soil	LAVSAPVDWEPLMGFAPDQDPEAVQAVALVADQVRVELLPLATVLGLVARVMVGTGCVTETVADCAALLPVPAQVRV
Ga0307474_110536421	3300031718	Hardwood Forest Soil	LAVSAPVDCDPLTGMEPDQDPEAVQAVALLADHVRVALLPLTTVLGLATRLTVGTGCVTETVADCDALLPPLPAQVSV
Ga0348332_141557332	3300032515	Plant Litter	VLDVRAPVVCEPLTALAPAHAPEATQEVALLDDQIKVETPPPATVLGLADRWTTGAAEVTDTVAD
Ga0370484_0190267_198_395	3300034125	Untreated Peat Soil	VGSLPDHAPEALHEVALVDDHVNVALPPLVIELGLAARATVGVGDVTETVADCEALPPVPVQARV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F034636

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences