Metagenome / Metatranscriptome Family F035262

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F035262
Family Type	Metagenome / Metatranscriptome
Number of Sequences	172
Average Sequence Length	72 residues
Representative Sequence	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRRE
Number of Associated Samples	122
Number of Associated Scaffolds	172

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.37 %
% of genes near scaffold ends (potentially truncated)	16.28 %
% of genes from short scaffolds (< 2000 bps)	80.23 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (69.767 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (37.209 % of family members)
Environment Ontology (ENVO)	Unclassified (54.070 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.395 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 62.77% β-sheet: 0.00% Coil/Unstructured: 37.23%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 172 Family Scaffolds
PF13560	HTH_31	29.65
PF01381	HTH_3	5.81
PF00171	Aldedh	4.65
PF04248	NTP_transf_9	4.07
PF00872	Transposase_mut	2.91
PF03330	DPBB_1	2.91
PF00625	Guanylate_kin	1.16
PF13358	DDE_3	1.16
PF00072	Response_reg	0.58
PF13191	AAA_16	0.58
PF17164	DUF5122	0.58
PF00196	GerE	0.58
PF13462	Thioredoxin_4	0.58
PF07811	TadE	0.58
PF03050	DDE_Tnp_IS66	0.58
PF01243	Putative_PNPOx	0.58
PF00211	Guanylate_cyc	0.58
PF13005	zf-IS66	0.58
PF16258	DUF4912	0.58
PF00296	Bac_luciferase	0.58
PF09977	Tad_C	0.58
PF02416	TatA_B_E	0.58
PF01425	Amidase	0.58

COG ID	Name	Functional Category	% Frequency in 172 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	4.65
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	4.65
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	4.65
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	4.07
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	2.91
COG0194	Guanylate kinase	Nucleotide transport and metabolism [F]	1.16
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.58
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.58
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.58
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.58
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.77 %
Unclassified	root	N/A	30.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.77 %
Unclassified	root	N/A	30.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.77 %
Unclassified	root	N/A	30.23 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.53 %
Unclassified	root	N/A	30.23 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.58 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.58 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	38.95 %
Unclassified	root	N/A	30.23 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.58 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.58 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	38.95 %
Unclassified	root	N/A	30.23 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.58 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.58 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	38.95 %
Unclassified	root	N/A	30.23 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.58 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	38.95 %
Unclassified	root	N/A	30.23 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.58 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.58 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005166\|Ga0066674_10008164	All Organisms → cellular organisms → Bacteria	4239	Open in IMG/M
3300005166\|Ga0066674_10059249	Not Available	1741	Open in IMG/M
3300005166\|Ga0066674_10537619	Not Available	521	Open in IMG/M
3300005171\|Ga0066677_10716534	Not Available	559	Open in IMG/M
3300005172\|Ga0066683_10254635	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300005174\|Ga0066680_10004345	All Organisms → cellular organisms → Bacteria → Proteobacteria	6640	Open in IMG/M
3300005174\|Ga0066680_10050102	All Organisms → cellular organisms → Bacteria	2450	Open in IMG/M
3300005174\|Ga0066680_10072045	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2070	Open in IMG/M
3300005175\|Ga0066673_10091299	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300005177\|Ga0066690_10368533	Not Available	974	Open in IMG/M
3300005178\|Ga0066688_10177689	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300005178\|Ga0066688_10280424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1072	Open in IMG/M
3300005179\|Ga0066684_10263184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1136	Open in IMG/M
3300005180\|Ga0066685_10328631	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1060	Open in IMG/M
3300005181\|Ga0066678_10471514	Not Available	835	Open in IMG/M
3300005181\|Ga0066678_10517814	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	793	Open in IMG/M
3300005186\|Ga0066676_10363280	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	970	Open in IMG/M
3300005186\|Ga0066676_10984362	Not Available	561	Open in IMG/M
3300005446\|Ga0066686_10699444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300005447\|Ga0066689_10096809	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300005447\|Ga0066689_10218603	Not Available	1162	Open in IMG/M
3300005450\|Ga0066682_10170642	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300005450\|Ga0066682_10195444	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300005467\|Ga0070706_100399468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1279	Open in IMG/M
3300005468\|Ga0070707_100052943	All Organisms → cellular organisms → Bacteria	3891	Open in IMG/M
3300005536\|Ga0070697_101276832	Not Available	655	Open in IMG/M
3300005552\|Ga0066701_10793473	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300005552\|Ga0066701_10925526	Not Available	516	Open in IMG/M
3300005554\|Ga0066661_10606915	Not Available	649	Open in IMG/M
3300005554\|Ga0066661_10953994	Not Available	502	Open in IMG/M
3300005556\|Ga0066707_10298585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1054	Open in IMG/M
3300005556\|Ga0066707_10997914	Not Available	511	Open in IMG/M
3300005557\|Ga0066704_10721109	Not Available	626	Open in IMG/M
3300005569\|Ga0066705_10357127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	920	Open in IMG/M
3300005574\|Ga0066694_10092226	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300005586\|Ga0066691_10522332	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300005587\|Ga0066654_10694620	Not Available	570	Open in IMG/M
3300006032\|Ga0066696_10726628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	637	Open in IMG/M
3300006791\|Ga0066653_10292294	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	823	Open in IMG/M
3300006794\|Ga0066658_10410008	Not Available	736	Open in IMG/M
3300006796\|Ga0066665_10737347	Not Available	779	Open in IMG/M
3300006796\|Ga0066665_10818995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	732	Open in IMG/M
3300006796\|Ga0066665_10857354	Not Available	709	Open in IMG/M
3300006797\|Ga0066659_10016375	All Organisms → cellular organisms → Bacteria	4132	Open in IMG/M
3300006797\|Ga0066659_10877158	Not Available	748	Open in IMG/M
3300007255\|Ga0099791_10023214	All Organisms → cellular organisms → Bacteria	2680	Open in IMG/M
3300007265\|Ga0099794_10048835	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300007265\|Ga0099794_10381604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	735	Open in IMG/M
3300009012\|Ga0066710_100895897	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1365	Open in IMG/M
3300009012\|Ga0066710_101096959	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300009012\|Ga0066710_102375060	Not Available	769	Open in IMG/M
3300009038\|Ga0099829_10256079	Not Available	1428	Open in IMG/M
3300009038\|Ga0099829_11180258	Not Available	634	Open in IMG/M
3300009088\|Ga0099830_11349015	Not Available	593	Open in IMG/M
3300009089\|Ga0099828_10247714	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300009090\|Ga0099827_11513884	Not Available	584	Open in IMG/M
3300009137\|Ga0066709_104342932	Not Available	517	Open in IMG/M
3300009143\|Ga0099792_10178160	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1193	Open in IMG/M
3300010301\|Ga0134070_10028817	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1831	Open in IMG/M
3300010301\|Ga0134070_10057870	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300010304\|Ga0134088_10049974	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1919	Open in IMG/M
3300010304\|Ga0134088_10472891	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	616	Open in IMG/M
3300010304\|Ga0134088_10562140	Not Available	565	Open in IMG/M
3300010320\|Ga0134109_10033615	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1642	Open in IMG/M
3300010322\|Ga0134084_10012684	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300010323\|Ga0134086_10042665	Not Available	1523	Open in IMG/M
3300010329\|Ga0134111_10144212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	939	Open in IMG/M
3300010333\|Ga0134080_10257543	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	772	Open in IMG/M
3300010336\|Ga0134071_10471162	Not Available	646	Open in IMG/M
3300010337\|Ga0134062_10023356	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300011270\|Ga0137391_10340179	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1290	Open in IMG/M
3300011271\|Ga0137393_10156388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1907	Open in IMG/M
3300011271\|Ga0137393_11247605	Not Available	630	Open in IMG/M
3300012096\|Ga0137389_10813658	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	802	Open in IMG/M
3300012198\|Ga0137364_10027025	All Organisms → cellular organisms → Bacteria	3618	Open in IMG/M
3300012199\|Ga0137383_10421678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	978	Open in IMG/M
3300012200\|Ga0137382_11257380	Not Available	524	Open in IMG/M
3300012201\|Ga0137365_10887036	Not Available	651	Open in IMG/M
3300012202\|Ga0137363_11807073	Not Available	504	Open in IMG/M
3300012205\|Ga0137362_10191414	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300012205\|Ga0137362_10673096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	890	Open in IMG/M
3300012206\|Ga0137380_10297781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1446	Open in IMG/M
3300012207\|Ga0137381_11467851	Not Available	574	Open in IMG/M
3300012207\|Ga0137381_11792928	Not Available	503	Open in IMG/M
3300012208\|Ga0137376_10729345	Not Available	854	Open in IMG/M
3300012210\|Ga0137378_10063187	All Organisms → cellular organisms → Bacteria	3349	Open in IMG/M
3300012211\|Ga0137377_11073846	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	735	Open in IMG/M
3300012285\|Ga0137370_10263710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1022	Open in IMG/M
3300012349\|Ga0137387_10255991	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1262	Open in IMG/M
3300012351\|Ga0137386_10121071	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300012351\|Ga0137386_10282250	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300012354\|Ga0137366_10182635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1572	Open in IMG/M
3300012356\|Ga0137371_10042024	All Organisms → cellular organisms → Bacteria	3529	Open in IMG/M
3300012356\|Ga0137371_10118399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2069	Open in IMG/M
3300012356\|Ga0137371_11185866	Not Available	570	Open in IMG/M
3300012357\|Ga0137384_10096691	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300012359\|Ga0137385_10147161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2073	Open in IMG/M
3300012361\|Ga0137360_10011179	All Organisms → cellular organisms → Bacteria	5726	Open in IMG/M
3300012361\|Ga0137360_10751109	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	839	Open in IMG/M
3300012362\|Ga0137361_10244919	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300012363\|Ga0137390_10409049	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1335	Open in IMG/M
3300012381\|Ga0134026_1044756	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1176	Open in IMG/M
3300012582\|Ga0137358_10012621	All Organisms → cellular organisms → Bacteria	5297	Open in IMG/M
3300012582\|Ga0137358_10526543	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	796	Open in IMG/M
3300012917\|Ga0137395_10223617	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300012917\|Ga0137395_10656184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	759	Open in IMG/M
3300012918\|Ga0137396_10953130	Not Available	625	Open in IMG/M
3300012918\|Ga0137396_11097692	Not Available	569	Open in IMG/M
3300012923\|Ga0137359_10021625	All Organisms → cellular organisms → Bacteria	5467	Open in IMG/M
3300012923\|Ga0137359_10936461	Not Available	746	Open in IMG/M
3300012929\|Ga0137404_10015188	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5442	Open in IMG/M
3300012929\|Ga0137404_10025321	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4334	Open in IMG/M
3300012929\|Ga0137404_11413736	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	643	Open in IMG/M
3300012929\|Ga0137404_12287566	Not Available	506	Open in IMG/M
3300012930\|Ga0137407_10131315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2189	Open in IMG/M
3300012930\|Ga0137407_10267496	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1554	Open in IMG/M
3300012972\|Ga0134077_10054598	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1480	Open in IMG/M
3300012976\|Ga0134076_10132785	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300014157\|Ga0134078_10262443	Not Available	729	Open in IMG/M
3300014166\|Ga0134079_10074634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1246	Open in IMG/M
3300015245\|Ga0137409_11070678	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300015264\|Ga0137403_10029676	All Organisms → cellular organisms → Bacteria	5795	Open in IMG/M
3300015356\|Ga0134073_10067846	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	994	Open in IMG/M
3300015358\|Ga0134089_10072774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1285	Open in IMG/M
3300017654\|Ga0134069_1016558	All Organisms → cellular organisms → Bacteria	2183	Open in IMG/M
3300017656\|Ga0134112_10385704	Not Available	577	Open in IMG/M
3300018431\|Ga0066655_10270394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1095	Open in IMG/M
3300018433\|Ga0066667_10090521	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300018433\|Ga0066667_10205037	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300018433\|Ga0066667_10274579	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1294	Open in IMG/M
3300018433\|Ga0066667_10610872	Not Available	910	Open in IMG/M
3300018482\|Ga0066669_10056476	All Organisms → cellular organisms → Bacteria	2516	Open in IMG/M
3300018482\|Ga0066669_10074736	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2255	Open in IMG/M
3300018482\|Ga0066669_10408843	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300019789\|Ga0137408_1201904	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1432	Open in IMG/M
3300020170\|Ga0179594_10303451	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300021432\|Ga0210384_10657665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	939	Open in IMG/M
3300025910\|Ga0207684_10980578	Not Available	708	Open in IMG/M
3300025910\|Ga0207684_11132396	Not Available	650	Open in IMG/M
3300025922\|Ga0207646_10039100	All Organisms → cellular organisms → Bacteria	4269	Open in IMG/M
3300026296\|Ga0209235_1192120	Not Available	734	Open in IMG/M
3300026298\|Ga0209236_1127371	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1114	Open in IMG/M
3300026307\|Ga0209469_1005477	All Organisms → cellular organisms → Bacteria	5302	Open in IMG/M
3300026307\|Ga0209469_1097755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	821	Open in IMG/M
3300026309\|Ga0209055_1238516	Not Available	560	Open in IMG/M
3300026316\|Ga0209155_1041458	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300026325\|Ga0209152_10164952	Not Available	835	Open in IMG/M
3300026328\|Ga0209802_1048680	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2110	Open in IMG/M
3300026328\|Ga0209802_1086365	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300026329\|Ga0209375_1060431	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1841	Open in IMG/M
3300026329\|Ga0209375_1099882	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1306	Open in IMG/M
3300026330\|Ga0209473_1070828	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300026332\|Ga0209803_1331054	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300026343\|Ga0209159_1049694	All Organisms → cellular organisms → Bacteria	2075	Open in IMG/M
3300026536\|Ga0209058_1003907	All Organisms → cellular organisms → Bacteria	11988	Open in IMG/M
3300026538\|Ga0209056_10007139	All Organisms → cellular organisms → Bacteria	11509	Open in IMG/M
3300026538\|Ga0209056_10233873	Not Available	1317	Open in IMG/M
3300026538\|Ga0209056_10335816	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300026540\|Ga0209376_1041009	All Organisms → cellular organisms → Bacteria	2762	Open in IMG/M
3300026547\|Ga0209156_10075872	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1713	Open in IMG/M
3300026548\|Ga0209161_10086152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1930	Open in IMG/M
3300026557\|Ga0179587_11098091	Not Available	524	Open in IMG/M
3300027655\|Ga0209388_1075596	Not Available	970	Open in IMG/M
3300027671\|Ga0209588_1062107	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300027846\|Ga0209180_10100443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1648	Open in IMG/M
3300027903\|Ga0209488_10859989	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
3300028536\|Ga0137415_10571087	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	941	Open in IMG/M
3300031720\|Ga0307469_10197265	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1568	Open in IMG/M
3300032180\|Ga0307471_100274112	All Organisms → cellular organisms → Bacteria	1757	Open in IMG/M
3300032180\|Ga0307471_100874412	Not Available	1066	Open in IMG/M
3300032180\|Ga0307471_102813248	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	618	Open in IMG/M
3300032205\|Ga0307472_102282264	Not Available	547	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.77%
Loam	Environmental → Terrestrial → Soil → Loam	5.23%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	41.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.49%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	37.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	33.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	12.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.49%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.58%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012381	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066674_100081641	3300005166	Soil	MSRLIWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQRRST*
Ga0066674_100592493	3300005166	Soil	MSRLAWVAAVLAPVVVAVLGLRWVLADFLLDQFGAPPDLSTHADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT*
Ga0066674_105376191	3300005166	Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDHFGSLPDSLTRAQHPEDERLASDRSESLHSSSRRETMERKQRRST*
Ga0066677_107165342	3300005171	Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRHEAMERKQMRST*
Ga0066683_102546351	3300005172	Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDHFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQRRST*
Ga0066680_100043457	3300005174	Soil	MSRLMWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0066680_100501023	3300005174	Soil	MSRLVWVSAVLALVVFAALGLRWALVDFLLDQFGSVPDSLTRAQHPDDECLASDRSEPVQSSLQSRGD*
Ga0066680_100720453	3300005174	Soil	MSRLAWVAAVLAPVVVAVLGLRWVLADFLLDQFGAPPDLSTYADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT*
Ga0066673_100912991	3300005175	Soil	MSRLAWVAAVLAPVVVAVLGLRWVLADFLLDQFGALPDLSTHADQAEGERLASDRSESLQSSSKAEAVEQSHAARSTRQRT*
Ga0066690_103685332	3300005177	Soil	MSRLMWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRG
Ga0066688_101776891	3300005178	Soil	MSRLMWVSAVLALVVLAGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0066688_102804242	3300005178	Soil	MSRLVSVSAALALVVVAALALRWALADFLLDQFGSLSDSLTRAQHPEDERLASDRSESLHSSSRREAMERKKIRSP*
Ga0066684_102631842	3300005179	Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKKIRSP*
Ga0066685_103286311	3300005180	Soil	MSRFVWVSAVLALVAVAALGLRWALADFLLDHFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQMRST*
Ga0066678_104715141	3300005181	Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESQHSSSRREAMERKQKRST*
Ga0066678_105178142	3300005181	Soil	MSRLVWVSAVLALVVFAALGLRWALVDFLLDQFGSVPDSLTRAQHPDDERLASDRSEPVQSSLQSRGD*
Ga0066676_103632804	3300005186	Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDHFGSLPDSLTRAQHPEDERLASDRSESLHSSS
Ga0066676_109843621	3300005186	Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRRE
Ga0066686_106994442	3300005446	Soil	MSRLTWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0066689_100968092	3300005447	Soil	MSRLMWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQRRST*
Ga0066689_102186032	3300005447	Soil	MSRLAWVAAVLAPVVVAVLGLRWVLADFLLDQFGALPDLSTHADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT*
Ga0066682_101706421	3300005450	Soil	MSRLVWVAAVLAPVVVAVLGLRWVLADFLLDQFGALPDLSTHADQAEGERLASDRSESLQSSSKAEAVEQSHAARSTRQRT*
Ga0066682_101954442	3300005450	Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDHFGSLPDSLTRAQHPEDERLASDRSESLHSSSQTRDDGTETEAVDMRAITL*
Ga0070706_1003994682	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLVWVSTVLALVVVAALGLRWALADFLLDRFGSLPESLTRGEPPEGEALASDRVESLQSSSGPEAVEPGAGGSP*
Ga0070707_1000529435	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLVWVSTVLALVVVAALGLRWALADFLLDRFGSLPDSLTRGEPPEDERLASASTESLQSSSGPEAVEPVADGSP*
Ga0070697_1012768322	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLVWVVAVLAPVVVAVLGLRWALADFLLDQFGAPSDLVTHAAHSEGEHLASDRSESVQSSFQSRGD*
Ga0066701_107934731	3300005552	Soil	LVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESQHSSSRREAMERKQKRST*
Ga0066701_109255261	3300005552	Soil	MSRLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEQPEGRHFASDRSDSLPSSSNPEAAER*
Ga0066661_106069152	3300005554	Soil	VAVLGLRWVLADFLLDQFGAPPDLSTYADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT*
Ga0066661_109539941	3300005554	Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHSEEERLASDRSESLHSSSRREAMERKQRRST*
Ga0066707_102985851	3300005556	Soil	MSRLMWVSAVLALAVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0066707_109979142	3300005556	Soil	MSRLVSVSAALALVVVAALALRWALADFLLDQFGSLPDSLTRAQHPEDERPASDRSEPVQSSSNPEAIET*
Ga0066704_107211092	3300005557	Soil	MSRLVWLSAVLVPVVVGALGLRWALADFLLDRFGSLPDSLTRAEPPEGERLASDRAESPQASSGPEAVEQ*
Ga0066705_103571271	3300005569	Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERPASDRSEPVQSSSNPEAIET*
Ga0066694_100922263	3300005574	Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0066691_105223322	3300005586	Soil	MSRLMWVSAVLALVVVAAVALRWALADFLLDQFGSVPDSLTRAQHPEDERPASDRSEPVQSSSNPEAIET*
Ga0066654_106946202	3300005587	Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQMRST*
Ga0066696_107266281	3300006032	Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQRRST*
Ga0066653_102922942	3300006791	Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQRPEEERLASDRSESLHSSSRREAMERKQMRST*
Ga0066658_104100082	3300006794	Soil	MSRLVSVSAALALVVVAALALRWALADFLLDQFGSLSDSLTRAQHPEDERLASDRSEPVQSSLQSRGD*
Ga0066665_107373471	3300006796	Soil	MSRLMWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESGGD*
Ga0066665_108189951	3300006796	Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESQH
Ga0066665_108573541	3300006796	Soil	MSRFVWVSAVLAFVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESQH
Ga0066659_100163752	3300006797	Soil	MSRLMWVSAVLTLVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0066659_108771582	3300006797	Soil	MSRFVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQRRST*
Ga0099791_100232143	3300007255	Vadose Zone Soil	MSRLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEHPEGERFASDRSDLLPSSSNPEAAER*
Ga0099794_100488352	3300007265	Vadose Zone Soil	MSRLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEHPEGERFASDRSDVIG
Ga0099794_103816042	3300007265	Vadose Zone Soil	MSRLVWVSAVLAPVVVAVLGLRWALADFLLDRFGSLPDSLTRGEHPEGERFASDRSDPLPSSSNPEAVEQ*
Ga0066710_1008958972	3300009012	Grasslands Soil	MSRLMWVSAVLALVVVAAVALRWALADFLLDQFGSVPDSLTRARHTEDERLASDRSEPVQSSLESRGDRR
Ga0066710_1010969593	3300009012	Grasslands Soil	MSRLVSVSAALALVVVAALALRWALADFLLDQFGSLPDSLTRAQHPEDERPASDRSEPVQSSSNPEAIET
Ga0066710_1023750601	3300009012	Grasslands Soil	MSRLAWVAEVLAPVVVAVLGLRWVLADFLLHQFGAPPDLSTYADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT
Ga0099829_102560793	3300009038	Vadose Zone Soil	MSRLVWLSAVLVPVVVGALGLRWALADFLLDHFGSLPDSLTRAESLEGERLASAGAESLQSSSGAEAVEQ*
Ga0099829_111802581	3300009038	Vadose Zone Soil	MSRLVWVSAVVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEQPEGRHFASDRSDLLSSSSNPEAVEQ*
Ga0099830_113490151	3300009088	Vadose Zone Soil	MSRLVWVSAVLVPVVVVALGLRWALADFLLDRFGSLPDSLTRAEPPEGERLASAGTEPLESSSGPEAVEQ*
Ga0099828_102477143	3300009089	Vadose Zone Soil	MSRLVWVSAVLLPVVVAVLGLRWALADFLLDQFGSLPDSLTREEHPKGERVASDRSDLLSSSSNPEAVEQ*
Ga0099827_115138841	3300009090	Vadose Zone Soil	MSRFVWVSAVLAFVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERQRMRSP*
Ga0066709_1043429321	3300009137	Grasslands Soil	MSRLMWVSAVLALVVVAAVALRWALADFLLDQFGSVPDSLTRARHTEDERLASDRSEPVQSSLESRGDRR*
Ga0099792_101781603	3300009143	Vadose Zone Soil	VSAVLVPVVVVALGLRWALADFLLDRFGALPDSLTREEHPEGERFASDRSDPLPSSSNPEAVEQ*
Ga0134070_100288173	3300010301	Grasslands Soil	AVLAPVVVAVLGLRWVLADFLLDQFGAPPDLSTYADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT*
Ga0134070_100578702	3300010301	Grasslands Soil	MSRLTWVSAVLVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0134088_100499743	3300010304	Grasslands Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSQTRDDGTETEAVDMRAITL*
Ga0134088_104728911	3300010304	Grasslands Soil	MSRLVWVSAVLALAVVAALGVRWVLADFLLDQFGSLPDSLTRAQHPEDERPASDRSEPVQSSSNPEAIER
Ga0134088_105621401	3300010304	Grasslands Soil	MSRLAWVAAVLAPVVVAVLGLRWVLADFLLDQFGAPPDLSTYADQAEGECLASDRSESPQSSSRADAVEQSHAARSTRQRT*
Ga0134109_100336152	3300010320	Grasslands Soil	VLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSQTRDDGTETEAVDMRAITL*
Ga0134084_100126845	3300010322	Grasslands Soil	MSRLVWVAAVLAPVVVAVLGLRWVLADFLLDQFGAPPDLSTHADQAEGERLASDRSESLQSSSKAEAVEQSHAARSTRQRT*
Ga0134086_100426652	3300010323	Grasslands Soil	MSRLVWVAAVLAPVVVAVLGLRWVLADFLLDQFGAPPDLSTHADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT*
Ga0134111_101442122	3300010329	Grasslands Soil	MSRLAWVAAVLAPVVVAVLGLRWVLADFLLDQFGAPPDLSTHADQAEGERLASDRSESPQ
Ga0134080_102575431	3300010333	Grasslands Soil	PIGCYGGEEECTMSRLTWVSAVLVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0134071_104711621	3300010336	Grasslands Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEEERLASDRSESLHSSSRREAMERKQMRST*
Ga0134062_100233562	3300010337	Grasslands Soil	MWVSAVLALVVLAGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0137391_103401791	3300011270	Vadose Zone Soil	MSRLVWVSAVLVPAVVVVLGLRWALADFLLDQFGSLPDSLTREEHPKGERFASDRSDLLSSSSNPEAVEQ*
Ga0137393_101563883	3300011271	Vadose Zone Soil	MSRLVWVSVVLAFGAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMER*
Ga0137393_112476052	3300011271	Vadose Zone Soil	MSRLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEHPKGERFASDRSDLLSSSSNPEAVEQ*
Ga0137389_108136581	3300012096	Vadose Zone Soil	MSRLVWVSAVLALVAVAALGVRWALADFLLDQFGSLPDSLTRAQHLEDERLASDRSESLHSSSRREAMER*
Ga0137364_100270253	3300012198	Vadose Zone Soil	MSRLAWVAAVLAPLVVAVLGLRWVLADFLLDQFGAPPDLSTYADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT*
Ga0137383_104216781	3300012199	Vadose Zone Soil	MSRLAWVAAVLAPVVVAVLGLRWVLADFLLDQFGALPDLSTHADQAEGERLASDRSES
Ga0137382_112573801	3300012200	Vadose Zone Soil	MSRLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEQPEGRHFASDRSDSLP
Ga0137365_108870361	3300012201	Vadose Zone Soil	MSRFVWVSAVLAFVAVAALGLRWALADFLLDQFGSLPDSLSRAQHSEDERLASDRSESLHSSSRRE
Ga0137363_118070731	3300012202	Vadose Zone Soil	MSRLVWLSAVLVPVVVGALGLRWALADFLVDRFGSLPDSLTRAEPPEGERLASDRAESPQASSGPEAVEQ*
Ga0137362_101914144	3300012205	Vadose Zone Soil	MSGLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEHPEGERFASDRSDLLPSSSNPEAAER*
Ga0137362_106730962	3300012205	Vadose Zone Soil	MSRLVWVSVVLAFGAVAALGLRWALADFLLDQFGSLPDSLTRAQHSEDERLASDRSESLHSSSRREAMERQRMRSP*
Ga0137380_102977812	3300012206	Vadose Zone Soil	MSRLVWVSVVLAFGAVAALGLRWALADFLLDQFGSLPDSLTRAQHSEDERLASDRSESLHSSSRREAMERKKIRSP*
Ga0137381_114678511	3300012207	Vadose Zone Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHSEDDRLASERSESLHSSSRREPMERKKIRSP*
Ga0137381_117929282	3300012207	Vadose Zone Soil	MSRLMWVSAVLALVVLAALGPRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0137376_107293451	3300012208	Vadose Zone Soil	MWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEQPEGRHFASDRSDSLPSSSNPEAAER*
Ga0137378_100631874	3300012210	Vadose Zone Soil	MSRFVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDHSESLHSSSRREAMERKQMRST*
Ga0137377_110738462	3300012211	Vadose Zone Soil	MWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEHPEGERFASDRSDLFPLSSNPEAAER*
Ga0137370_102637101	3300012285	Vadose Zone Soil	MSRLAWVAAVLAPVVVAVLGLRWVLADFLLDQFGALPNLSTHADQAEGERIASDRSESLQSSSRADAVEQSHAARSTRQRT*
Ga0137387_102559912	3300012349	Vadose Zone Soil	MSRLVWVSAVLALVAVAALGLRWALVDFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQMRST*
Ga0137386_101210711	3300012351	Vadose Zone Soil	MWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0137386_102822501	3300012351	Vadose Zone Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHSEDERLASDRSESLHSSSRREAMERKKIRSP*
Ga0137366_101826354	3300012354	Vadose Zone Soil	MSRLVWVSVVLAFGAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQRRST*
Ga0137371_100420243	3300012356	Vadose Zone Soil	MSRLAWVAAVLAPVVVAVLGLRWVLADFLLDQFGALPDLSTHADQAEGERLASDRSESLQSSSRADAVEQSHAARSTRQRT*
Ga0137371_101183993	3300012356	Vadose Zone Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDHFGSLPDSLRAQHPEDERLASDRSESLHSSSRREAMERKQMRST*
Ga0137371_111858662	3300012356	Vadose Zone Soil	MSRFVWVSAVLAFVAVAALGLRWALADFLLDQFGSLPDSLTRAQHSEDERLASDRSESLHSSSRREAMERKQ
Ga0137384_100966913	3300012357	Vadose Zone Soil	MSRLVWVSAVLALVAIAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQKRST*
Ga0137385_101471614	3300012359	Vadose Zone Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQMRST*
Ga0137360_100111796	3300012361	Vadose Zone Soil	MSRLVWLSAVLAPVVVGALGLRWALADFLLDRFGSLPDSLTRAEPPEGERLASDRAESPQASSGPEAVEQ*
Ga0137360_107511091	3300012361	Vadose Zone Soil	RLVWVSVVLAFGAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERQRMRSP*
Ga0137361_102449191	3300012362	Vadose Zone Soil	MSRLVWVSAVLVPVVVVVLGLRWALADFLLDQFGALPDSLTREEHAEGERFASDRSDLLPSSSNPEAAER*
Ga0137390_104090493	3300012363	Vadose Zone Soil	MSRLVWVSAVLVPAVVVVLGLRWALADFLLDQFGSLPDSLTREEQPEGRHFASDRSDLLPSSSNPEAAER*
Ga0134026_10447562	3300012381	Grasslands Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDHFGSLPDSLTRAQHPEDERLASDRSELLHSSSRREAMERKQRRST*
Ga0137358_100126213	3300012582	Vadose Zone Soil	MSRWMWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0137358_105265432	3300012582	Vadose Zone Soil	MSRLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTPEEHPEGERFASDRSDLLPSSSNREAAER*
Ga0137395_102236171	3300012917	Vadose Zone Soil	MSRLVWVSAVLLPVVVVVLGLRWALADFLLDRFGSLPDSLTREEHPEGERFASDRSDLLPSSSNPEAAER*
Ga0137395_106561842	3300012917	Vadose Zone Soil	MSRLVWVSAVLVPAVVVVLGLRWALADFLLDQFGSLPDSLTREEHPKGERVASDRSDLLSSSSNPEAVEQ*
Ga0137396_109531302	3300012918	Vadose Zone Soil	MSRLVWVSAVLVPLVVVALGLRWALADFLLDRFGSLPDSLTRAEPPEGEHLASAGAESLQSSSGPEAVQR*
Ga0137396_110976921	3300012918	Vadose Zone Soil	MSRLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEHPEGERFASDRSDLLPSSSNPEAVGK*
Ga0137359_100216253	3300012923	Vadose Zone Soil	MSRLVWLSAVLVPVVVGALRLRWALADFLLDRFGSLPDSLTRAEPPEGERLASDRAESPQASSGPEAVEQ*
Ga0137359_109364612	3300012923	Vadose Zone Soil	MWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESR
Ga0137404_100151882	3300012929	Vadose Zone Soil	MSRLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEQPEGRHFASDRSDLLPSSSNPEVAER*
Ga0137404_100253215	3300012929	Vadose Zone Soil	MSRLAWVSAVLLVAVAALGLRWALADFLLDQFGSLPDSLTRAQHSEDERLASDRSESLHSSSRREAMERKKIRSP*
Ga0137404_114137362	3300012929	Vadose Zone Soil	MPRLVWVVAVLAPVVVAVLGLRWALADFLLDQFGAPSDLVTHAAHPEGEHLASDRSESLQSSSRPEAVEQ*
Ga0137404_122875662	3300012929	Vadose Zone Soil	MSRLVWVSAVLLPVVVAVLGLRWALSDFLLDQFGSLPDSLTREEHPKGERFASDRSDLLSSSSNPEAVEQ*
Ga0137407_101313153	3300012930	Vadose Zone Soil	MSPLAWVSAVLLVAVAALGLRWALADFLLDQFGSLPDSLTRAQHSEDERLASDRSEPVQSSLQSRGD*
Ga0137407_102674963	3300012930	Vadose Zone Soil	MPRLVWVVAVLAPVVVAVLGLRWALADFLLDQFGAPSDLVTHAAHPEGEHLASDRSESRQSSSGPEAVEQ*
Ga0134077_100545982	3300012972	Grasslands Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEEERLASDRSESLHSSSRREAMERKQRRST*
Ga0134076_101327852	3300012976	Grasslands Soil	LAPVVVAVLGLRWVLADFLLDQFGAPPDLSTYADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT*
Ga0134078_102624431	3300014157	Grasslands Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHSEDERLASDRSESLHSSSRREAMERKQRRST*
Ga0134079_100746342	3300014166	Grasslands Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQRRST*
Ga0137409_110706781	3300015245	Vadose Zone Soil	AEFLAMLALVAVAALGLRWPLADFLLDQFGSLPDSLTRAQHSEDERLASDRSESLHSSSRREAMERKKIRSP*
Ga0137403_100296764	3300015264	Vadose Zone Soil	MSPLAWVSAVLLVAVAALGLRWALADFLLDQFGSLPDSLTRAQHSEDERLASDRSESLHSSSRREAMERKKIRSP*
Ga0134073_100678463	3300015356	Grasslands Soil	MWVSAVLALAVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0134089_100727742	3300015358	Grasslands Soil	MSRLTWVSAVLALVVPAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD*
Ga0134069_10165584	3300017654	Grasslands Soil	MSRLAWVAAVLAPVVVAVLGLRWVLADFLLDQFGAPPDLSTHADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT
Ga0134112_103857042	3300017656	Grasslands Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKKIRSP
Ga0066655_102703942	3300018431	Grasslands Soil	MSRLMWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD
Ga0066667_100905213	3300018433	Grasslands Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDHFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQRRST
Ga0066667_102050372	3300018433	Grasslands Soil	MSRLMWVSAVLALVVLAGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQ
Ga0066667_102745792	3300018433	Grasslands Soil	MSRLVWVSAVLALVVFAALGLRWALVDFLLDQFGSVPDSLTRAQHPDDECLASDRSEPVQSSLQSRGD
Ga0066667_106108721	3300018433	Grasslands Soil	MSRLVWVAAVLAPLVVAVLGLRWALADFLLDRFGALPDLSTHADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT
Ga0066669_100564764	3300018482	Grasslands Soil	MSRLMWVSAALALGVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD
Ga0066669_100747363	3300018482	Grasslands Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSELLHSSSRREAMERKQRRST
Ga0066669_104088433	3300018482	Grasslands Soil	MSRLVWVAAVLAPVVVAVLGLRWVLADFLLDQFGALPDLSTHADQAEGERLASDRSESLQSSSKAEAVEQSHAARSTRQRT
Ga0137408_12019042	3300019789	Vadose Zone Soil	MPRLVWVVAVLAPVVVAVLGLRWALADFLLDQFGAPSDLVTHAAHPEGEHLASDRSESRQSSSGPEAVEQ
Ga0179594_103034511	3300020170	Vadose Zone Soil	VWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEQPEGRHFASDRSDLLPSSSNPEVAER
Ga0210384_106576651	3300021432	Soil	MSCVVWVSAVLLPVVVGAFGLRWALADFLLDRFGSFPDSLTGGEHPEGERAASDRAESLHASSRPEAVEQ
Ga0207684_109805781	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLVWVSAVLVPVVVGALGLRWALADFLLDRFGSLPDSLTRAEPPEGERLASAGAESLQSSSGPEAVEQ
Ga0207684_111323962	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLVWVSTVLALVVVAALGLRWALADFLLDRFGSLPESLTRGEPPEGEALASDRVESLQSSSGPEAVEPGAGGSP
Ga0207646_100391005	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLVWVSTVLALVVVAALGLRWALADFLLDRFGSLPDSLTRGEPPEDERLASASTESLQSSSGPEAVEPVADGSP
Ga0209235_11921202	3300026296	Grasslands Soil	MSRLIWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQRRST
Ga0209236_11273711	3300026298	Grasslands Soil	MSRLVWLSAVLVPVVVGALGLRWALADFLLDRFGSLPDSLTRAEPPEGERLASDRAESPQASSGPEAVEQ
Ga0209469_10054773	3300026307	Soil	MSRLTWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD
Ga0209469_10977552	3300026307	Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDHFGSLPDSLTRAQHPEDERLASDRSESLHSSSRRETMERKQRRST
Ga0209055_12385161	3300026309	Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHSEEERLASDRSESLHSSSRREAMERKQRRST
Ga0209155_10414582	3300026316	Soil	MSRLAWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQRRST
Ga0209152_101649521	3300026325	Soil	MSRLVSVSAALALVVVAALALRWALADFLLDQFGSLSDSLTRAQHPEDERLASDRSEPVQSSLQSRGD
Ga0209802_10486802	3300026328	Soil	MSRLAWVAAVLAPVVVAVLGLRWVLADFLLDQFGAPPDLSTYADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT
Ga0209802_10863653	3300026328	Soil	EEERTMSRLMWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD
Ga0209375_10604313	3300026329	Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDHFGSLPDSLTRAQHPEDERLASDRSESLHSSSQTRDDGTETEAVDMRAITL
Ga0209375_10998821	3300026329	Soil	MSRLTWVSAVLVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD
Ga0209473_10708281	3300026330	Soil	MSRLMWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSE
Ga0209803_13310542	3300026332	Soil	MSRLVWVSAVLTLVVVAALALRWALADFLLDQFGSLPDSLTRAQHPEDERLASKRSEPLQSSLQSRGDRT
Ga0209159_10496943	3300026343	Soil	MSRLMWVSAVLALAVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD
Ga0209058_100390714	3300026536	Soil	PIGCYGGEEECTMSRLMWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESRGD
Ga0209056_1000713914	3300026538	Soil	MSRLMWVSAVLALVVLAALGLRWALADFLLDQFGSLPDSMTRARHPEDERRASDRSESGQSSFESGGD
Ga0209056_102338733	3300026538	Soil	MSRLVWVAAVLAPVVVAVLGLRWALADFLLDQFGALPDLSTHADQAEGERLASDRSESLQSSSRAEAVEQSHTARSTRQCT
Ga0209056_103358161	3300026538	Soil	WVSAVLAFVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESQHSSSRREAMERKQKRST
Ga0209376_10410093	3300026540	Soil	MSRFVWVSAVLALVAVAALGLRWALADFLLDHFGSLPDSLTRAQHPEDERLASDRSESLHSSSRREAMERKQRRST
Ga0209156_100758722	3300026547	Soil	MSRLVWVAAVLAPVVVAVLGLRWVLADFLLDQFGALPDLSTHADQAEGERLASDRSESPQSSSRADAVEQSHAARSTRQRT
Ga0209161_100861522	3300026548	Soil	MSRLVWVSAVLALVAVAALGLRWALADFLLDQFGSLPDSLTRAQHPEDERLASDRSESQHSSSRREAMERKQKRST
Ga0179587_110980912	3300026557	Vadose Zone Soil	MSRLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEHPKGERFASDRSDLLSSSSNPEAVKQ
Ga0209388_10755961	3300027655	Vadose Zone Soil	MSGLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEHPEGERFASDRSDLLPSSSNPEAAER
Ga0209588_10621072	3300027671	Vadose Zone Soil	MSGLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEHPEGERFASDRSDVIG
Ga0209180_101004432	3300027846	Vadose Zone Soil	MSRLVWLSAVLVPVVVGALGLRWALADFLLDHFGSLPDSLTRAESLEGERLASAGAESLQSSSGAEAVEQ
Ga0209488_108599892	3300027903	Vadose Zone Soil	MSGLVWVSAVLVPVVVVALGLRWALADFLLDRFGSLPDSLTRGEHPEGERFASDRSDPLPSSSNPEAVEQ
Ga0137415_105710872	3300028536	Vadose Zone Soil	MSRLVWVSAVLVPVVVVVLGLRWALADFLLDQFGSLPDSLTREEQPEGRHFASDRSDSLPSSSNPEAAER
Ga0307469_101972653	3300031720	Hardwood Forest Soil	MSRLVWVVAVLAPVVVAVLGLRWALADFLLDQFGAPSDLVTHAAHSEGEHLASDRSESVQSSFQSRGD
Ga0307471_1002741121	3300032180	Hardwood Forest Soil	MSRLGWVSAVLAPVAVAVFGLRWVLADFLLDQFGSLPDSLTRAKHPEAERLASDRSES
Ga0307471_1008744122	3300032180	Hardwood Forest Soil	MSRLMWVSAVLVPVVVVVFGLRWVLADFLLDQFGSRPGSLTRAEHPEGERRASDRSESLQSSFQPPGD
Ga0307471_1028132482	3300032180	Hardwood Forest Soil	MSRLVWVSAVLVPVVVGALGLRWVLADFLLDWFGSLPDWLPRAQHPKDERLASDRSESVQSPFQSRGN
Ga0307472_1022822642	3300032205	Hardwood Forest Soil	MSRLGWVSAVLAPVAVAVFGLRWVLADFLLDQFGSLPDSLTRAKHPEAERLASDRSESLQSSVEPPRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035262

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences