Metagenome / Metatranscriptome Family F035465

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035465
Family Type	Metagenome / Metatranscriptome
Number of Sequences	172
Average Sequence Length	53 residues
Representative Sequence	VVAAALLALALSLGLLVASLFRADGLGLVWASLAVDLVAVTLLVTALRRRRAR
Number of Associated Samples	108
Number of Associated Scaffolds	172

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.72 %
% of genes near scaffold ends (potentially truncated)	22.09 %
% of genes from short scaffolds (< 2000 bps)	82.56 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.326 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (29.651 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.721 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.02% β-sheet: 0.00% Coil/Unstructured: 41.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 172 Family Scaffolds
PF13699	DUF4157	20.93
PF08264	Anticodon_1	7.56
PF05103	DivIVA	7.56
PF11253	DUF3052	1.74
PF02325	YGGT	1.16
PF01168	Ala_racemase_N	1.16
PF04472	SepF	1.16
PF12327	FtsZ_C	0.58
PF02578	Cu-oxidase_4	0.58
PF01479	S4	0.58
PF00155	Aminotran_1_2	0.58
PF13011	LZ_Tnp_IS481	0.58
PF08245	Mur_ligase_M	0.58

COG ID	Name	Functional Category	% Frequency in 172 Family Scaffolds
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	1.16
COG1799	Cell division protein SepF/YlmF, interacts with FtsZ	Cell cycle control, cell division, chromosome partitioning [D]	1.16
COG1496	Copper oxidase (laccase) domain	Inorganic ion transport and metabolism [P]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.33 %
Unclassified	root	N/A	47.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.33 %
Unclassified	root	N/A	47.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.33 %
Unclassified	root	N/A	47.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.37 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	1.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.67 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	11.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.58 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.63 %
Nitriliruptoraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae	0.58 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.63 %
Nitriliruptor	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor	0.58 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.63 %
Nitriliruptor alkaliphilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus	0.58 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2343483	Not Available	779	Open in IMG/M
3300000550\|F24TB_11319191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	861	Open in IMG/M
3300003203\|JGI25406J46586_10002460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8755	Open in IMG/M
3300003203\|JGI25406J46586_10140238	Not Available	707	Open in IMG/M
3300003373\|JGI25407J50210_10036065	Not Available	1273	Open in IMG/M
3300003373\|JGI25407J50210_10060344	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300003373\|JGI25407J50210_10070072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	875	Open in IMG/M
3300003373\|JGI25407J50210_10105789	Not Available	695	Open in IMG/M
3300003373\|JGI25407J50210_10114701	Not Available	664	Open in IMG/M
3300003373\|JGI25407J50210_10152099	Not Available	570	Open in IMG/M
3300003373\|JGI25407J50210_10190033	Not Available	506	Open in IMG/M
3300004016\|Ga0058689_10098208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300004463\|Ga0063356_101799657	Not Available	920	Open in IMG/M
3300004463\|Ga0063356_105016922	Not Available	569	Open in IMG/M
3300005562\|Ga0058697_10311927	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300005562\|Ga0058697_10318127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300005562\|Ga0058697_10449520	Not Available	649	Open in IMG/M
3300005562\|Ga0058697_10538430	Not Available	601	Open in IMG/M
3300005563\|Ga0068855_101674443	Not Available	649	Open in IMG/M
3300005937\|Ga0081455_10027764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5183	Open in IMG/M
3300005937\|Ga0081455_10027959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5158	Open in IMG/M
3300005981\|Ga0081538_10030692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3643	Open in IMG/M
3300005981\|Ga0081538_10044143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2785	Open in IMG/M
3300005981\|Ga0081538_10064784	Not Available	2064	Open in IMG/M
3300005981\|Ga0081538_10154391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1033	Open in IMG/M
3300005981\|Ga0081538_10173390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	937	Open in IMG/M
3300005981\|Ga0081538_10219569	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300005983\|Ga0081540_1029580	All Organisms → cellular organisms → Bacteria	3048	Open in IMG/M
3300005985\|Ga0081539_10146761	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300005985\|Ga0081539_10203096	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300005985\|Ga0081539_10268519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300005985\|Ga0081539_10455919	Not Available	530	Open in IMG/M
3300006049\|Ga0075417_10000333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10076	Open in IMG/M
3300006058\|Ga0075432_10001668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7313	Open in IMG/M
3300006169\|Ga0082029_1415854	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300006844\|Ga0075428_101637008	Not Available	672	Open in IMG/M
3300006844\|Ga0075428_101905116	Not Available	617	Open in IMG/M
3300006845\|Ga0075421_100931901	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300006847\|Ga0075431_100499735	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300006852\|Ga0075433_10372233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1261	Open in IMG/M
3300007004\|Ga0079218_13908603	Not Available	507	Open in IMG/M
3300009147\|Ga0114129_11338860	Not Available	886	Open in IMG/M
3300009157\|Ga0105092_10221142	Not Available	1060	Open in IMG/M
3300009157\|Ga0105092_10416715	Not Available	765	Open in IMG/M
3300009789\|Ga0126307_10166774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1765	Open in IMG/M
3300009789\|Ga0126307_10502130	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300009789\|Ga0126307_10507820	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300009789\|Ga0126307_10747664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300009789\|Ga0126307_10879632	Not Available	723	Open in IMG/M
3300009840\|Ga0126313_10051132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2914	Open in IMG/M
3300009840\|Ga0126313_10194629	Not Available	1553	Open in IMG/M
3300009840\|Ga0126313_10904682	Not Available	720	Open in IMG/M
3300009840\|Ga0126313_10932132	Not Available	709	Open in IMG/M
3300009840\|Ga0126313_11783260	Not Available	515	Open in IMG/M
3300010037\|Ga0126304_10537774	Not Available	786	Open in IMG/M
3300010037\|Ga0126304_11067479	Not Available	552	Open in IMG/M
3300010038\|Ga0126315_10182667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1257	Open in IMG/M
3300010038\|Ga0126315_10199296	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300010039\|Ga0126309_10500591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300010040\|Ga0126308_10193191	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300010040\|Ga0126308_10709379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300010041\|Ga0126312_10405334	Not Available	970	Open in IMG/M
3300010041\|Ga0126312_10933337	Not Available	633	Open in IMG/M
3300010042\|Ga0126314_10378357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1018	Open in IMG/M
3300010042\|Ga0126314_10934959	Not Available	642	Open in IMG/M
3300010044\|Ga0126310_10119183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1632	Open in IMG/M
3300010045\|Ga0126311_10692383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300010145\|Ga0126321_1264269	Not Available	571	Open in IMG/M
3300010166\|Ga0126306_10091879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2178	Open in IMG/M
3300010166\|Ga0126306_10308930	Not Available	1219	Open in IMG/M
3300010166\|Ga0126306_10730558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	796	Open in IMG/M
3300010362\|Ga0126377_13391428	Not Available	515	Open in IMG/M
3300013306\|Ga0163162_10043042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4520	Open in IMG/M
3300014487\|Ga0182000_10173337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300014487\|Ga0182000_10278018	Not Available	686	Open in IMG/M
3300014487\|Ga0182000_10506523	Not Available	563	Open in IMG/M
3300014488\|Ga0182001_10089603	Not Available	929	Open in IMG/M
3300014497\|Ga0182008_10011334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4746	Open in IMG/M
3300015262\|Ga0182007_10154441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782	Open in IMG/M
3300017792\|Ga0163161_11157723	Not Available	667	Open in IMG/M
3300017965\|Ga0190266_10014667	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300017965\|Ga0190266_10422590	Not Available	748	Open in IMG/M
3300017965\|Ga0190266_10517792	Not Available	700	Open in IMG/M
3300018000\|Ga0184604_10042000	Not Available	1224	Open in IMG/M
3300018000\|Ga0184604_10071051	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300018028\|Ga0184608_10080978	Not Available	1331	Open in IMG/M
3300018031\|Ga0184634_10360269	Not Available	667	Open in IMG/M
3300018051\|Ga0184620_10006736	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300018051\|Ga0184620_10198394	Not Available	666	Open in IMG/M
3300018054\|Ga0184621_10131075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300018061\|Ga0184619_10148743	Not Available	1068	Open in IMG/M
3300018066\|Ga0184617_1011489	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300018066\|Ga0184617_1040852	Not Available	1145	Open in IMG/M
3300018073\|Ga0184624_10088783	Not Available	1310	Open in IMG/M
3300018076\|Ga0184609_10271758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300018082\|Ga0184639_10255863	Not Available	925	Open in IMG/M
3300018422\|Ga0190265_10053778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3530	Open in IMG/M
3300018429\|Ga0190272_12963544	Not Available	526	Open in IMG/M
3300018432\|Ga0190275_10238297	Not Available	1747	Open in IMG/M
3300018465\|Ga0190269_10424044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300018466\|Ga0190268_10345833	Not Available	923	Open in IMG/M
3300018466\|Ga0190268_11126383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300018466\|Ga0190268_11358392	Not Available	605	Open in IMG/M
3300018469\|Ga0190270_10317401	Not Available	1398	Open in IMG/M
3300018476\|Ga0190274_10002354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11145	Open in IMG/M
3300018476\|Ga0190274_10275100	Not Available	1546	Open in IMG/M
3300018476\|Ga0190274_10341163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1419	Open in IMG/M
3300018481\|Ga0190271_12916679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300019269\|Ga0184644_1115296	Not Available	986	Open in IMG/M
3300019377\|Ga0190264_10069501	Not Available	1515	Open in IMG/M
3300019377\|Ga0190264_11270631	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300019767\|Ga0190267_10433035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300019767\|Ga0190267_11327363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300019869\|Ga0193705_1062128	Not Available	752	Open in IMG/M
3300020005\|Ga0193697_1103871	Not Available	675	Open in IMG/M
3300021073\|Ga0210378_10009788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4084	Open in IMG/M
3300021445\|Ga0182009_10006578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3791	Open in IMG/M
3300021510\|Ga0222621_1055752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	829	Open in IMG/M
3300022195\|Ga0222625_1114113	Not Available	507	Open in IMG/M
3300022756\|Ga0222622_10838800	Not Available	672	Open in IMG/M
3300026686\|Ga0208213_101733	Not Available	777	Open in IMG/M
3300027018\|Ga0208475_1000323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3577	Open in IMG/M
3300027718\|Ga0209795_10082034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	935	Open in IMG/M
3300027750\|Ga0209461_10031570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1011	Open in IMG/M
3300027750\|Ga0209461_10109651	Not Available	635	Open in IMG/M
3300027750\|Ga0209461_10189555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	519	Open in IMG/M
3300027873\|Ga0209814_10000094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23052	Open in IMG/M
3300028597\|Ga0247820_10766862	Not Available	676	Open in IMG/M
3300028705\|Ga0307276_10023717	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300028705\|Ga0307276_10059299	Not Available	864	Open in IMG/M
3300028708\|Ga0307295_10005403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2948	Open in IMG/M
3300028720\|Ga0307317_10018476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2119	Open in IMG/M
3300028721\|Ga0307315_10053874	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300028722\|Ga0307319_10283781	Not Available	547	Open in IMG/M
3300028744\|Ga0307318_10029006	Not Available	1797	Open in IMG/M
3300028814\|Ga0307302_10164810	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300028824\|Ga0307310_10694228	Not Available	522	Open in IMG/M
3300028828\|Ga0307312_10408491	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300028878\|Ga0307278_10001375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12102	Open in IMG/M
3300028878\|Ga0307278_10009983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4454	Open in IMG/M
3300028878\|Ga0307278_10220669	Not Available	843	Open in IMG/M
3300028881\|Ga0307277_10009301	All Organisms → cellular organisms → Bacteria	3783	Open in IMG/M
3300028881\|Ga0307277_10429483	Not Available	591	Open in IMG/M
3300028881\|Ga0307277_10571749	Not Available	507	Open in IMG/M
3300028884\|Ga0307308_10025555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2728	Open in IMG/M
3300028885\|Ga0307304_10312544	Not Available	696	Open in IMG/M
3300030496\|Ga0268240_10025045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1159	Open in IMG/M
3300030510\|Ga0268243_1016086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1436	Open in IMG/M
3300030510\|Ga0268243_1074557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300030513\|Ga0268242_1063689	Not Available	715	Open in IMG/M
3300030514\|Ga0268253_10319105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300030606\|Ga0299906_10644179	Not Available	800	Open in IMG/M
3300031091\|Ga0308201_10075460	Not Available	916	Open in IMG/M
3300031114\|Ga0308187_10188034	Not Available	715	Open in IMG/M
3300031548\|Ga0307408_100338682	Not Available	1272	Open in IMG/M
3300031548\|Ga0307408_100608294	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300031731\|Ga0307405_11623410	Not Available	571	Open in IMG/M
3300031852\|Ga0307410_10265174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus	1341	Open in IMG/M
3300031901\|Ga0307406_10610234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300031903\|Ga0307407_11464535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300031903\|Ga0307407_11599093	Not Available	517	Open in IMG/M
3300031911\|Ga0307412_10078644	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300031938\|Ga0308175_100045903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3742	Open in IMG/M
3300031995\|Ga0307409_100080316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2631	Open in IMG/M
3300031995\|Ga0307409_100233308	Not Available	1670	Open in IMG/M
3300032080\|Ga0326721_10167850	Not Available	1130	Open in IMG/M
3300032159\|Ga0268251_10028681	Not Available	1710	Open in IMG/M
3300032159\|Ga0268251_10261489	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300034172\|Ga0334913_034467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1092	Open in IMG/M
3300034172\|Ga0334913_112321	Not Available	577	Open in IMG/M
3300034174\|Ga0334932_007724	Not Available	1744	Open in IMG/M
3300034174\|Ga0334932_011923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1425	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.12%
Host-Associated	Host-Associated	34.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.91%
Plants	Host-Associated → Plants	34.88%
Aquatic	Environmental → Aquatic	12.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.21%
Sediment	Environmental → Aquatic → Sediment	8.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.14%
Roots	Host-Associated → Plants → Roots	7.56%
Phylloplane	Host-Associated → Plants → Phylloplane	4.65%
Freshwater	Environmental → Aquatic → Freshwater	3.49%
Phyllosphere	Host-Associated → Plants → Phyllosphere	2.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.14%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	7.56%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	4.65%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	2.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.91%
Loam	Environmental → Terrestrial → Soil → Loam	1.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.14%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	7.56%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	4.65%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.33%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.16%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.58%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	15.12%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.56%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	7.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.23%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	5.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.81%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	4.65%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.33%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	2.33%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.16%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.16%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.16%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.58%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026686	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1097 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23434834	3300000033	Soil	AATPQHVVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRRAR*
F24TB_113191912	3300000550	Soil	VVAAALLALALAMGLLVVSLFRADGLGLVWASLAVDAVAVTLLVTALRRRRAP*
JGI25406J46586_100024602	3300003203	Tabebuia Heterophylla Rhizosphere	VVAGALVALVLSLGLLVASLFRTDGLTLVWVSLATDLVAVALLAAALRRRRAARRSAPGP
JGI25406J46586_101402382	3300003203	Tabebuia Heterophylla Rhizosphere	VVACAVGALMLSLGLLVASLFRTDGLVLVWASLATDLVAVVLLAGALRRRRAARRP*
JGI25407J50210_100360653	3300003373	Tabebuia Heterophylla Rhizosphere	VVAGALLALALSLGLLVASLFRSDGLGLVWASLAIDLVALTLLVTALRRRRAR*
JGI25407J50210_100603441	3300003373	Tabebuia Heterophylla Rhizosphere	VVAAALLALALSLGLLVASLFRADGLGLVWASLAVDLVAVTLLVTAVRRRRAR*
JGI25407J50210_100700722	3300003373	Tabebuia Heterophylla Rhizosphere	LVAGALLSLATAMGLLVVSLFRADGLALVWASLAADAVALTLLVAALQRRRPAPPR*
JGI25407J50210_101057891	3300003373	Tabebuia Heterophylla Rhizosphere	VVAAAVAALALSLGLLAASLFRADGLGLVWASLAVDLAAVTLLVTALRRRRAR*
JGI25407J50210_101147012	3300003373	Tabebuia Heterophylla Rhizosphere	VVAAALLALALSLGLLVASLFRADGLGLVWASLAVDAXAXTLLVXALRRRRXR*
JGI25407J50210_101520992	3300003373	Tabebuia Heterophylla Rhizosphere	VVAAAVAALALSLGLLVASLFRADGLGLVWASLAVDLVAVTLLVTALRRRRRAR*
JGI25407J50210_101900332	3300003373	Tabebuia Heterophylla Rhizosphere	VVAGALLALALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVSALRRRRVD*
Ga0058689_100982082	3300004016	Agave	VVAAALLALALSLGLLIVSLFRADGLGLVWASLATDVVAVTLLVTALRRRRAR*
Ga0063356_1017996572	3300004463	Arabidopsis Thaliana Rhizosphere	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRRAR*
Ga0063356_1050169221	3300004463	Arabidopsis Thaliana Rhizosphere	VVAAALLALALSLGLLVVSLFRSDGLGLVWASLATDAVAVTLLVTALRRRRAR*
Ga0058697_103119272	3300005562	Agave	VVAAALLALALALGLLVASLFRADGLGLVWASLAADAVAVTLLVTALRRRRAR*
Ga0058697_103181272	3300005562	Agave	VVAAALLALALALGLLVVSLFRADGLALVWASLAVDAVAVALLVTALRRRRAR*
Ga0058697_104495201	3300005562	Agave	VVAAALLALALSLGLLVVSLFRADGLGLVWASLAVDAVAITLLVTALRRRRAR*
Ga0058697_105384302	3300005562	Agave	VVAGALLALALAMGLLVVSLFRSDGLGLVWASLAVDLVAVTLLVTALRRRRAP*
Ga0068855_1016744431	3300005563	Corn Rhizosphere	QHVVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRRAR*
Ga0081455_100277645	3300005937	Tabebuia Heterophylla Rhizosphere	VVAAALLALALSLGLLVASLFRADGLGLVWASLAVDLVAVTLLVTALRRRRAR*
Ga0081455_100279596	3300005937	Tabebuia Heterophylla Rhizosphere	LVAAALLALALSLGLLVASLFRSDGLGLVWASLAVDLVAVTLLVTALRRRAG*
Ga0081538_100306924	3300005981	Tabebuia Heterophylla Rhizosphere	VVAAALLALALSLGLLVASLFRADGLGLVWASLATDVVAVTLLVTALRRRRAR*
Ga0081538_100441432	3300005981	Tabebuia Heterophylla Rhizosphere	VVAAALLALALSLGLLVASLFRADGVGLVWASLAVDAVAVTLLVAALRRRRAR*
Ga0081538_100647842	3300005981	Tabebuia Heterophylla Rhizosphere	VVAGALLALALSIGLLVASLFRADGLGLVWASLAVDVIALTLLVTALRRRRAR*
Ga0081538_101543912	3300005981	Tabebuia Heterophylla Rhizosphere	MVAGALLALALALGLLVASLFRTDGLSLVWASLAVDAVAVTLLVTALRRRRPG*
Ga0081538_101733902	3300005981	Tabebuia Heterophylla Rhizosphere	VVAAALLALALSLGLLVASLFRADGLGLVWASLAVDAIAVTLLVTALRRRRVR*
Ga0081538_102195692	3300005981	Tabebuia Heterophylla Rhizosphere	VVAGALLVLALSIGLLVASLFRADGLGLVWASLALDLVAVTLLVSAVRRRRVR*
Ga0081540_10295803	3300005983	Tabebuia Heterophylla Rhizosphere	VIAGALLALVLSLALLVASLFRTDGLTLVWASLATDLVAVALLAAALRRRRAARGG*
Ga0081539_101467612	3300005985	Tabebuia Heterophylla Rhizosphere	VVAAALLALALAMGLLVVSLFRADGLGLVWASLAVDAVAVTLLVTALRRRRAR*
Ga0081539_102030962	3300005985	Tabebuia Heterophylla Rhizosphere	VVAGALAALLLSLGLLVASLFRTDGLTLVWASLAADLVALALLAAALRRRRAARGP*
Ga0081539_102685191	3300005985	Tabebuia Heterophylla Rhizosphere	ALALSLGLLVASLFRTDGLTLVWASLATDLVAVALLAAALRRRRAAARRSGSGP*
Ga0081539_104559191	3300005985	Tabebuia Heterophylla Rhizosphere	VVAGALAALVLSLGLLVASLFRTDGLTLVWASLATDLVAVALLAAALRRRR
Ga0075417_100003333	3300006049	Populus Rhizosphere	VVVAAALLALAPAMGLLVVSLFRADGLGLVWASLAVDAVAVTLLVTALRRRRAR*
Ga0075432_100016684	3300006058	Populus Rhizosphere	VVVAAALLALALAMGLLVVSLFRADGLGLVWASLAVDAVAVTLLVTALRRRRAR*
Ga0082029_14158542	3300006169	Termite Nest	VVAGALFALVLSLGLLVASLFRTDGLTLVWASLATDLVALALLVAALRRRAARGP*
Ga0075428_1016370081	3300006844	Populus Rhizosphere	LVAGALLALALSLGLLVASLFRSDGLGLVWASLAVDLVALTLLVTALRRRRAG
Ga0075428_1019051162	3300006844	Populus Rhizosphere	VVAAALLALALAMGLLVVSLFRADGLALVWASLAADAVAVALLVTALRRRRTR
Ga0075421_1009319011	3300006845	Populus Rhizosphere	VVAGALLALAAAMGLLIVSLFRSDGLGLVWASLAVDLVAVALLVTALRRRRAR*
Ga0075431_1004997352	3300006847	Populus Rhizosphere	VVAGALLALAAAMGLLIVSLFRSDGLGLVWASLAVDVVAVALLVTALRRRRAR*
Ga0075433_103722332	3300006852	Populus Rhizosphere	VVAAALLALALAMGLLVVSLFRADGLALVWASLAADAVAVALLVTALRRRRTR*
Ga0079218_139086031	3300007004	Agricultural Soil	VVAGALLALALSLGLLVASLFRADGLGLIWASLALDLVAVTLLVSA
Ga0114129_113388602	3300009147	Populus Rhizosphere	LVAGALLALALSLGLLVASLFRSDGLGLVWASLAVDLVALTLLVTALRRRRAG*
Ga0105092_102211422	3300009157	Freshwater Sediment	VVAGALLALALAMGLLVASLFRADGLGLVWASLALDLVALTLLVTALRRRRAG*
Ga0105092_104167152	3300009157	Freshwater Sediment	VVAGALIALAAAMGLLIVSLFRSDGLGLVWASLAVDPVAVALLVTALRRRRAR*
Ga0126307_101667742	3300009789	Serpentine Soil	VVAGALLALALALGLLVASLFRADGLSLVWASLALDLVAVTLLVTALRRRRAR*
Ga0126307_105021301	3300009789	Serpentine Soil	STVPGGPVVAGALLALVLSLGFLVASLFRSDGLTLVWASLATDLVAVALLAAALRRRRAAARRSSPEA*
Ga0126307_105078203	3300009789	Serpentine Soil	SDPHVVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRHRAR*
Ga0126307_107476642	3300009789	Serpentine Soil	VVAGALGALVLSLGFLVASLFRTDGLTLVWASLATDLVAVALLAAALRRRRAAARRSPPGP*
Ga0126307_108796322	3300009789	Serpentine Soil	VVAAALLALALSLGLLVVSLFRADGLGLVWASLAVDAVALTLLVTALRRRRPG*
Ga0126313_100511324	3300009840	Serpentine Soil	VVAAALLALALSLGLLIVSLFRADGLGLVWASLATDVVAVTLLVTALRRRRAP*
Ga0126313_101946292	3300009840	Serpentine Soil	VVAAALLALALSLALLVASLFRADGLGLVWASLAVDLVAVTLLVTALRRRRAR*
Ga0126313_109046821	3300009840	Serpentine Soil	VVAGALGALVLSLGLLVASLFRPAGLTLVWASPGWNLVAVALLAAALRRRRAARGP
Ga0126313_109321322	3300009840	Serpentine Soil	VVAAALLALALSLGLLVASLFRADGLGLVWASLAVDAVAVTLLVTALRRRRAR*
Ga0126313_117832602	3300009840	Serpentine Soil	VVAGALLALVLSLGLLVASLFRTDGLTLVWASLALDLVAVGLLAAALRRRRAAARRSPSGP*
Ga0126304_105377742	3300010037	Serpentine Soil	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRHRAR*
Ga0126304_110674792	3300010037	Serpentine Soil	LVAGALLALALALGLLVASLFRADGLGLVWASLAVDLVAVTLLVTALRRRRAR*
Ga0126315_101826672	3300010038	Serpentine Soil	VVAAALLALALSLGLLVVSLFRADGLGLVWASLAVDAVALTLLVTALRRRRAR*
Ga0126315_101992963	3300010038	Serpentine Soil	VPGGPVVAGALLALVLSLGFLVASLFRSDGLTLVWASLATDLVAVALLVTALRRRRAARRS*
Ga0126309_105005912	3300010039	Serpentine Soil	VVAGALLALALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVSALRRRRAD*
Ga0126308_101931913	3300010040	Serpentine Soil	VVAGALGALVLSLGLLVASLFRTDGLTLVWASLATDLVAVALLVTALRRRRAARRSDLGP
Ga0126308_107093792	3300010040	Serpentine Soil	VVAAALLALALSLGLLVVSLFRADGLGLVWASLAVDAVALTLLVTALRRRRAG*
Ga0126312_104053342	3300010041	Serpentine Soil	VVAAALLALALSLGLLVVSLFRADGLGLVWASLAVDAVAVTLLVTALRRRRAR*
Ga0126312_109333372	3300010041	Serpentine Soil	VVAGALLALVLSLGLLVASLFRTDGLTLVWASLAVDLVAVALLAAALRRRRAAARRSPSGP*
Ga0126314_103783571	3300010042	Serpentine Soil	LLALALSLGLLVVSLFRADGLGLVWASLAVDAVALTLLVTALRRRRPG*
Ga0126314_109349591	3300010042	Serpentine Soil	VVAAALLALALSLGLLVVSLFRADGLGLVWASLAVDAVALTLLV
Ga0126310_101191832	3300010044	Serpentine Soil	VVAGALGALVLSLGLLVASLFRTDGLTLVWASLAADLVAAALLVTALRRRRAARRS*
Ga0126311_106923833	3300010045	Serpentine Soil	AGALGALVLSLGLLVASLFRTDGLTLVWASLATDLVAVALLVTALRRRRAARRS*
Ga0126321_12642692	3300010145	Soil	VVAAALLALALSLGLLIVSLFRADGLGLVWASLATDVVAVTLLVTALRRRRA
Ga0126306_100918792	3300010166	Serpentine Soil	VVAGALLALVLSLGLLVASLFRADGLGLVWASLALDLVALTLLVTALRRRAR*
Ga0126306_103089301	3300010166	Serpentine Soil	VVAGALLTLALALGLLVASLFRADGLSLVWASLALDLVAVTLLVTALRRRRAR*
Ga0126306_107305582	3300010166	Serpentine Soil	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTTLRRRRAR*
Ga0126377_133914282	3300010362	Tropical Forest Soil	LVAGALLALALSLGLLVASLFRNDGLGLVWASLAVDLVALTLLVTALRRRRAG*
Ga0163162_100430425	3300013306	Switchgrass Rhizosphere	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRAR*
Ga0182000_101733372	3300014487	Soil	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRRFR*
Ga0182000_102780182	3300014487	Soil	VVAAALLALALSLGLLVLSLFRADGVGLVWASLATDAVALTLLVTALRRRRAR*
Ga0182000_105065232	3300014487	Soil	VVAGALLALAVALALLVGSLFSTDGLVLVWASLAVNAVAVTLLVAALRRRRPAEPR*
Ga0182001_100896032	3300014488	Soil	VVAGALLALALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVSALRRRRAG*
Ga0182008_100113345	3300014497	Rhizosphere	VVAAALLALALSLGLLVVSLFRADGLGLVWASLATDVVAVTLLVTALRRRRAR*
Ga0182007_101544411	3300015262	Rhizosphere	VVAAALLALALSLGLLVVSLLRADGLGLVWASLATDVVAVTLLVTALRRRRAR*
Ga0163161_111577231	3300017792	Switchgrass Rhizosphere	HVVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRRAR
Ga0190266_100146674	3300017965	Soil	VVAAALLALALSLGLLVVSLFRADGLGLVWASLATDVVAVALLVAALRRRRAG
Ga0190266_104225901	3300017965	Soil	VVAAALLALALALGLLVASLFRANGLSLVWASLAFDLVAVTLLVTALRRRRAR
Ga0190266_105177922	3300017965	Soil	VVAGALLALAAAMGLLIVSLFRSDGLGLVWASLAVDLVAVALLVTALRRRRAR
Ga0184604_100420003	3300018000	Groundwater Sediment	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRRAR
Ga0184604_100710512	3300018000	Groundwater Sediment	VVAGALLALAVAMGLLVASLFRTDGLGFVWASLAVDLVALTLLVTALRRRRNP
Ga0184608_100809782	3300018028	Groundwater Sediment	VVAGALLALAVAMGLLVASLFRSDGLGLVWASLAVDLVALTLLVTALRRRRNP
Ga0184634_103602692	3300018031	Groundwater Sediment	VVAGALLALAAAMGLLIVSLFRSDGLGLVWASLAVDVVAVALLVTALRRRRAR
Ga0184620_100067361	3300018051	Groundwater Sediment	VVAGALLTLALSLGLLVASLFRADGLSLVWASLALDLVAVTLLVTALRRRRAR
Ga0184620_101983942	3300018051	Groundwater Sediment	VVAGALLALAVAMGLLVASLFRTDGLGLVWASLAVDLVALTLLVTALRRRRNP
Ga0184621_101310753	3300018054	Groundwater Sediment	VVAGALLALAVAMGLLVASLFRSDGLGFVWASLAVDLVALTLLVTALRRRRSP
Ga0184619_101487431	3300018061	Groundwater Sediment	VVAAALLALALAMGLLVVSLFRADGLGLVWASLAVDAVAVTLLVTA
Ga0184617_10114892	3300018066	Groundwater Sediment	VVAGALLALAVAMGLLVASLFRSDGLGFVWASLAVDLVALTLLVTALRRRRDP
Ga0184617_10408522	3300018066	Groundwater Sediment	VVAGALLTLALSLGLLVASLFRADGLGLVWVSLALDLVAVTLLVTALRRRRAR
Ga0184624_100887833	3300018073	Groundwater Sediment	VVAGALLALAAAMGLLIVSLFRSDGLGLVWASLAVDLVAVVLLVTALRRRRAR
Ga0184609_102717582	3300018076	Groundwater Sediment	VVAAALLALAVAMGLLVASLFRADGLSFVWASLAVDAVAVTLLVAALRRRAR
Ga0184639_102558632	3300018082	Groundwater Sediment	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRAR
Ga0190265_100537783	3300018422	Soil	VVAGALFALALSLGLLVASLFRADGLGLVWASLALDLVALTLLVTALRRRAR
Ga0190272_129635442	3300018429	Soil	VVAGALLALALSLGLLVASLFRADGLGLVWASLALDLVALTLLVTALRRRRAG
Ga0190275_102382971	3300018432	Soil	VIAAALLALALSLGLLIASLFRADGLGLVWATLAVDLVAVTLL
Ga0190269_104240442	3300018465	Soil	VVAGALGALVLSLGLLVASLFRTDGLTLVWASLATDLVAVALLVAALRRRRAARRS
Ga0190268_103458332	3300018466	Soil	VVAAALLALAVAMGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRRAR
Ga0190268_111263832	3300018466	Soil	VVAAALLALALSLGLLVVSLFRADGLGLVWASLAVDAVAVTLLVTALRRRRAR
Ga0190268_113583922	3300018466	Soil	ALSLGLLVVSLFRADGLGLVWASLAVDAVALTLLVTALRRRRAG
Ga0190270_103174013	3300018469	Soil	VIAGALLALAAAMGLLIVSLFRSDGLGLVWASLAVDLVAVALLVTALRRRRAR
Ga0190274_100023542	3300018476	Soil	VIAAALLALALSLGLLVASLFRADGLGLVWASLAVDLVAVTLLVTALRRRRAR
Ga0190274_102751001	3300018476	Soil	LLALAAAMALLIVSLFRSDGLGLVWASLAVDLVAVALLVTALRRRRAR
Ga0190274_103411633	3300018476	Soil	VVAGALLALALSLGLLVASLFRADGLGLVWASLALDLVALTLLVTALRRRAR
Ga0190271_129166792	3300018481	Soil	VIAGALLALATAMGLLIVSLFRSDGLGLVWASLAVDLVAVALLVTALRRRRAR
Ga0184644_11152961	3300019269	Groundwater Sediment	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRHAR
Ga0190264_100695012	3300019377	Soil	VVAGALLALVLSLGLLVASLFRADGLGLVWASLALDLVALTLLVTALRRRAR
Ga0190264_112706312	3300019377	Soil	VVAGALLCLAVAMGLLVASLFSVDGVGFVWASLAVDAVAVTLLVTALRRRQAR
Ga0190267_104330352	3300019767	Soil	VVAAALLALALAMGLLVVSLFRADGLGLVWASLAVDAVAVTLLVTALRRRRAP
Ga0190267_113273632	3300019767	Soil	VVAGALLALAVAMGLLIVSLFRSDGLGLVWASLAVDLVAVALLVTALRRRRAR
Ga0193705_10621282	3300019869	Soil	VVAGALLALAVAMGLLVASLFRSDGLGFVWASLAVDLVALTLLVTALRRRRNP
Ga0193697_11038712	3300020005	Soil	LAAAMGLLIVSLFRSDGLGLVWASLAVDLVAVALLVTALRRRRAR
Ga0210378_100097885	3300021073	Groundwater Sediment	VVAAALLALAVAMGLLVASLFRVDGLSFVWASLAVDAVAVTLLVAALRRRAR
Ga0182009_100065785	3300021445	Soil	VVAAALLALALSLGLLVVSLFRADGLGLVWASLATDVVAVTLLVTALRRRRAR
Ga0222621_10557522	3300021510	Groundwater Sediment	VVAAALLALALAMGLLVVSLFRADGLGLVWASLAVDAVAVTLLVTALRRRRAR
Ga0222625_11141131	3300022195	Groundwater Sediment	LAVAMGLLVASLFRSDGLGFVWASLAVDLVALTLLVTALRRRRNP
Ga0222622_108388002	3300022756	Groundwater Sediment	VVAGALLALAAAMGLLIVSLFRSDGLGLVWASLAVDLVAVALLVTALRRRRAP
Ga0208213_1017332	3300026686	Soil	VVAAALLALALSLGLLIVSLFRADGLGLVWASLATDVVAVTLLVTALRRR
Ga0208475_10003232	3300027018	Soil	VVAAALLALALSLGLLVVSLFHADGLGLVWASLATDVVAVTLLVAALRRRRAR
Ga0209795_100820343	3300027718	Agave	VVAAALLALALSLGLLIVSLFRADGLGLVWASLATDVVAVTLLVTALRRRRAR
Ga0209461_100315702	3300027750	Agave	VVAAALLALALALGLLVVSLFRADGLALVWASLAVDAVAVALLVTALRRRRAR
Ga0209461_101096512	3300027750	Agave	VVAAALLALALSLGLLVVSLFRADGLGLVWASLAVDAVAITLLVTALRRRRAR
Ga0209461_101895551	3300027750	Agave	VVAGALLALALAMGLLVASLFRSDGLGLVWASLAVDLVALTLLVTALRRRRAP
Ga0209814_1000009418	3300027873	Populus Rhizosphere	VVVAAALLALALAMGLLVVSLFRADGLGLVWASLAVDAVAVTLLVTALRRRRAR
Ga0247820_107668621	3300028597	Soil	VVAGALLALAAAMGLQIVSLFRSDGLGLVWASLAVDLVAVALLVAA
Ga0307276_100237171	3300028705	Soil	ALAVAMGLLVASLFRTDGLGFVWASLAVDLVALTLLVTALRRRRNP
Ga0307276_100592992	3300028705	Soil	VVAGALLALAVAMGLLVASLFRTDGLGFVWASLAVDLVALTLLVTALRRRRN
Ga0307295_100054032	3300028708	Soil	VVAAALLALALAMGLLVVSLFRADGLGLVWASLAVDAVAVTLLVTALRRR
Ga0307317_100184764	3300028720	Soil	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTAL
Ga0307315_100538743	3300028721	Soil	VVAGALLALAVAMGLLVASLFRTDGLGLVWASLAVDLVALTLLVTALRRRRSP
Ga0307319_102837812	3300028722	Soil	VVAAALLALALALGLLVASLFRADGLSLVWASLALDLVAVTLLVTALRRRRAR
Ga0307318_100290062	3300028744	Soil	VVAGALLALALALGLLVASLFRADGLSLVWASLALDLVAVTLLVTALRRRRAR
Ga0307302_101648101	3300028814	Soil	VVAGALLALAVAMGLLFASLFRTDGLGFVWASLAVDLVALTLLVTALRRRRNP
Ga0307310_106942282	3300028824	Soil	ALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRRAR
Ga0307312_104084911	3300028828	Soil	AGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRRAR
Ga0307278_100013757	3300028878	Soil	VVAGALLALALAMGLLVVSLFRSDGAGLVWASLAVDLVALTLLVTALRRRRAR
Ga0307278_100099833	3300028878	Soil	MVAGALLALALSLGLLVASLFRADGLGFVWASLAVDLVALTLLVTALRRRRSP
Ga0307278_102206692	3300028878	Soil	MVVAAALLALAVAMGLLVASLFRADGLSFVWASLAVDAVAVTLLVAALRRRAR
Ga0307277_100093013	3300028881	Soil	VIAGALGALVLSLGLLVASLFRTDGLTLVWASLATDLVAVALLIAALRRRRAARGP
Ga0307277_104294831	3300028881	Soil	TLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRRAR
Ga0307277_105717491	3300028881	Soil	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRR
Ga0307308_100255552	3300028884	Soil	VVVAGALLALAVAMGLLVASLFRSDGLGFVWASLAVDLVALTLLVTALRRRRNP
Ga0307304_103125441	3300028885	Soil	VVAAALLALALAMGLLVVSLFRADGLGLVWASLAVDAVAVTLLV
Ga0268240_100250452	3300030496	Soil	VVAGALVALVLSLGLLVASLFRTDGLTLVWASLAVDLVAVALLVAALRRRRAARGP
Ga0268243_10160862	3300030510	Soil	VVAGALLALVLSLGLLVASLFRTDGLTLVWASLGVDLVAVALLAAALRRRRAARRSAPGP
Ga0268243_10745572	3300030510	Soil	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRRFR
Ga0268242_10636892	3300030513	Soil	VVAGALLALALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVSALRRRRAG
Ga0268253_103191052	3300030514	Agave	VVAAALLALALSLGLLVVSLFRADGVGLVWASLATDAVALTLLVTALRRRRTR
Ga0299906_106441791	3300030606	Soil	VIAGALLALAAAMGLLIVSLFRSDGLGLVWASLAVDLVAVALLVTALRR
Ga0308201_100754602	3300031091	Soil	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLL
Ga0308187_101880342	3300031114	Soil	VVAGALLTLALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVTALRRRAC
Ga0307408_1003386823	3300031548	Rhizosphere	VVAGALLALALSLGLLVASLFRADGLGLVWASLALDLVAVTLLVSALRRRRAD
Ga0307408_1006082942	3300031548	Rhizosphere	VVAAALLALALSLALLVASLFRADGLGLVWASLAVDLVAVTLLVTALRRRRAR
Ga0307405_116234102	3300031731	Rhizosphere	VVAAALLALALSLGLLVASLFRADGLGLVWASLAVDLVAVTLLVTALRRRRAR
Ga0307410_102651743	3300031852	Rhizosphere	RRGRGSVVAAALLALALSLGLLVASLFRADGLGLVWASLAVDLVAVTLLVTALRRRRAR
Ga0307406_106102342	3300031901	Rhizosphere	VVAGALGALVLSLGLLVASLFRTDGLTLVWASLAADLVAVALLVTALRRRRAARRS
Ga0307407_114645351	3300031903	Rhizosphere	VVAAALLALALSLGLLVVSLFRADGLGLVWASLAVDAVALTLLVTALRRRRAR
Ga0307407_115990932	3300031903	Rhizosphere	VVAGALLALVLSLGLLVASLFRTDGLTLVWASLATDLVAVALLAAALRRRRAAARRSSPE
Ga0307412_100786443	3300031911	Rhizosphere	LALSLGLLVVSLFRADGLGLVWASLAVDAVAVTLLVTALRRRRAR
Ga0308175_1000459033	3300031938	Soil	VVAGALLALAVAMGLLVASLFRSDGLGLVWASLAADLVALTLLVTALRRRRNP
Ga0307409_1000803163	3300031995	Rhizosphere	VIAGALGALVLSLGLLVASLFRTDGLTLVWASLGVDLVAVALLAAALRRRRAARGP
Ga0307409_1002333083	3300031995	Rhizosphere	VVAAALLALALSLALLVASLFRADGLGLVWASLAVDLVAVTLLALRRRRAR
Ga0326721_101678501	3300032080	Soil	VVAGALGALVLSLGLLVASLFRTDGLTLVWASLAADLVAVALLVTALRRRRPARRS
Ga0268251_100286812	3300032159	Agave	VVAGALLALALAMGLLVVSLFRSDGLGLVWASLAVDLVAVTLLVTALRRRRAP
Ga0268251_102614892	3300032159	Agave	VVAAALLALALALGLLVASLFRADGLGLVWASLAADAVAVTLLVTALRRRRAR
Ga0334913_034467_446_604	3300034172	Sub-Biocrust Soil	VVAAALLALALSLGLLVASLFRADGLGLVWASLAADLVALTLLGTALRRRRS
Ga0334913_112321_447_575	3300034172	Sub-Biocrust Soil	VVAAALLALALALGLLVASLFRADGLGLVWASLAADAVAVTLL
Ga0334932_007724_170_337	3300034174	Sub-Biocrust Soil	VVRVVVAALLALALALALLVASLFRADGLGLVWASLAADAVAVTLLVTALRRRAR
Ga0334932_011923_145_306	3300034174	Sub-Biocrust Soil	VVAAALLALALSLGLLVASLFRADGLGLVWASLATDVVAVTLLVTALRRRRAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035465

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences