Metagenome / Metatranscriptome Family F035470

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035470
Family Type	Metagenome / Metatranscriptome
Number of Sequences	172
Average Sequence Length	59 residues
Representative Sequence	MRTLKLFGLAFALAGAAFVFTMLKDPPKSVASDPTQTIQPNDIKIQTGIPSGDYDAN
Number of Associated Samples	81
Number of Associated Scaffolds	172

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.91 %
% of genes near scaffold ends (potentially truncated)	30.23 %
% of genes from short scaffolds (< 2000 bps)	93.60 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.791 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (33.139 % of family members)
Environment Ontology (ENVO)	Unclassified (40.116 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.837 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 29.41% β-sheet: 0.00% Coil/Unstructured: 70.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 172 Family Scaffolds
PF13404	HTH_AsnC-type	2.33
PF00202	Aminotran_3	2.33
PF00294	PfkB	1.74
PF06080	DUF938	1.74
PF13358	DDE_3	1.74
PF13610	DDE_Tnp_IS240	1.16
PF13586	DDE_Tnp_1_2	1.16
PF13229	Beta_helix	1.16
PF13340	DUF4096	1.16
PF13328	HD_4	1.16
PF00196	GerE	0.58
PF01710	HTH_Tnp_IS630	0.58
PF05598	DUF772	0.58
PF02371	Transposase_20	0.58
PF07929	PRiA4_ORF3	0.58
PF07592	DDE_Tnp_ISAZ013	0.58
PF13546	DDE_5	0.58
PF07702	UTRA	0.58
PF12161	HsdM_N	0.58
PF07690	MFS_1	0.58
PF01068	DNA_ligase_A_M	0.58

COG ID	Name	Functional Category	% Frequency in 172 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.58
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.58
COG3415	CRISPR-associated protein Csa3, CARF domain	Defense mechanisms [V]	0.58
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.79 %
All Organisms	root	All Organisms	37.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.79 %
cellular organisms	root	All Organisms → cellular organisms	37.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.23 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.16 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.60 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.79 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	7.56 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.33 %
Aurantimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae	1.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.79 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	4.07 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	2.91 %
Aureimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	1.74 %
Rhizobiales bacterium YIM 77505	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium YIM 77505	1.74 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.58 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.79 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	2.33 %
Aureimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	1.74 %
Rhizobiales bacterium YIM 77505	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium YIM 77505	1.74 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.58 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.58 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.58 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.79 %
Methylobacterium sp. MB200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. MB200	1.16 %
Methylobacterium sp. WSM2598	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WSM2598	1.16 %
Aureimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	1.74 %
Rhizobiales bacterium YIM 77505	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium YIM 77505	1.74 %
Microvirga sp. BSC39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. BSC39	0.58 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.58 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.58 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10037643	All Organisms → cellular organisms → Bacteria	3330	Open in IMG/M
3300001686\|C688J18823_10088698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2147	Open in IMG/M
3300001686\|C688J18823_10291534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1073	Open in IMG/M
3300002568\|C688J35102_120021217	Not Available	849	Open in IMG/M
3300002568\|C688J35102_120213877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	930	Open in IMG/M
3300002568\|C688J35102_120341963	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300003569\|Ga0007420J51693_1049862	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300003570\|Ga0007418J51697_1058498	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300004081\|Ga0063454_101351192	Not Available	600	Open in IMG/M
3300004153\|Ga0063455_100024898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1699	Open in IMG/M
3300004153\|Ga0063455_100452311	Not Available	780	Open in IMG/M
3300004153\|Ga0063455_100797010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WSM2598	653	Open in IMG/M
3300004153\|Ga0063455_101673522	Not Available	504	Open in IMG/M
3300004479\|Ga0062595_100585609	Not Available	865	Open in IMG/M
3300004801\|Ga0058860_10066237	Not Available	521	Open in IMG/M
3300005093\|Ga0062594_102868088	Not Available	537	Open in IMG/M
3300005327\|Ga0070658_11017674	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300005331\|Ga0070670_100676939	Not Available	927	Open in IMG/M
3300005338\|Ga0068868_100905665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	802	Open in IMG/M
3300005338\|Ga0068868_101864669	Not Available	569	Open in IMG/M
3300005340\|Ga0070689_101850750	Not Available	551	Open in IMG/M
3300005347\|Ga0070668_101381610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	642	Open in IMG/M
3300005355\|Ga0070671_101524921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. MB200	592	Open in IMG/M
3300005355\|Ga0070671_101598660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	578	Open in IMG/M
3300005438\|Ga0070701_10232414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1105	Open in IMG/M
3300005456\|Ga0070678_101876544	Not Available	566	Open in IMG/M
3300005457\|Ga0070662_100453025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	1065	Open in IMG/M
3300005457\|Ga0070662_101696517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WSM2598	545	Open in IMG/M
3300005459\|Ga0068867_100805663	Not Available	838	Open in IMG/M
3300005546\|Ga0070696_101702100	Not Available	543	Open in IMG/M
3300005548\|Ga0070665_100964181	Not Available	865	Open in IMG/M
3300005548\|Ga0070665_102379300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. MB200	532	Open in IMG/M
3300005614\|Ga0068856_100167180	All Organisms → cellular organisms → Bacteria → Proteobacteria	2211	Open in IMG/M
3300005615\|Ga0070702_101003238	Not Available	661	Open in IMG/M
3300005618\|Ga0068864_100218004	All Organisms → cellular organisms → Bacteria → Proteobacteria	1759	Open in IMG/M
3300005719\|Ga0068861_100628867	Not Available	989	Open in IMG/M
3300005719\|Ga0068861_100982178	Not Available	805	Open in IMG/M
3300005841\|Ga0068863_101884507	Not Available	608	Open in IMG/M
3300005843\|Ga0068860_101684405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	656	Open in IMG/M
3300006169\|Ga0082029_1131388	Not Available	556	Open in IMG/M
3300006755\|Ga0079222_11427346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300007790\|Ga0105679_10427862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1054	Open in IMG/M
3300007790\|Ga0105679_10807719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1119	Open in IMG/M
3300009098\|Ga0105245_10329802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	1506	Open in IMG/M
3300009098\|Ga0105245_10718294	Not Available	1033	Open in IMG/M
3300009098\|Ga0105245_11534127	Not Available	717	Open in IMG/M
3300009098\|Ga0105245_12369667	Not Available	584	Open in IMG/M
3300009101\|Ga0105247_10623332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	802	Open in IMG/M
3300009148\|Ga0105243_11691961	Not Available	661	Open in IMG/M
3300009545\|Ga0105237_12585849	Not Available	518	Open in IMG/M
3300009551\|Ga0105238_10188787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2037	Open in IMG/M
3300009553\|Ga0105249_12800991	Not Available	559	Open in IMG/M
3300009789\|Ga0126307_10061460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	2946	Open in IMG/M
3300009789\|Ga0126307_10086961	Not Available	2469	Open in IMG/M
3300009789\|Ga0126307_10241724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1451	Open in IMG/M
3300009789\|Ga0126307_10424984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. BSC39	1072	Open in IMG/M
3300009789\|Ga0126307_10453841	Not Available	1034	Open in IMG/M
3300009789\|Ga0126307_10690904	Not Available	823	Open in IMG/M
3300009789\|Ga0126307_11093612	Not Available	645	Open in IMG/M
3300009789\|Ga0126307_11146521	Not Available	629	Open in IMG/M
3300009840\|Ga0126313_10642900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	857	Open in IMG/M
3300009840\|Ga0126313_11068180	Not Available	663	Open in IMG/M
3300009840\|Ga0126313_11167544	Not Available	634	Open in IMG/M
3300010036\|Ga0126305_10185833	Not Available	1311	Open in IMG/M
3300010036\|Ga0126305_10370440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	941	Open in IMG/M
3300010036\|Ga0126305_10474006	Not Available	832	Open in IMG/M
3300010037\|Ga0126304_10096142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1867	Open in IMG/M
3300010037\|Ga0126304_10184975	Not Available	1359	Open in IMG/M
3300010037\|Ga0126304_10199469	Not Available	1308	Open in IMG/M
3300010037\|Ga0126304_10267664	All Organisms → cellular organisms → Bacteria → Proteobacteria	1127	Open in IMG/M
3300010037\|Ga0126304_10937393	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300010037\|Ga0126304_11048565	Not Available	557	Open in IMG/M
3300010038\|Ga0126315_10407221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	856	Open in IMG/M
3300010038\|Ga0126315_11063967	Not Available	545	Open in IMG/M
3300010039\|Ga0126309_10077685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1660	Open in IMG/M
3300010039\|Ga0126309_10116223	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300010039\|Ga0126309_10262845	Not Available	983	Open in IMG/M
3300010039\|Ga0126309_10334255	Not Available	887	Open in IMG/M
3300010039\|Ga0126309_10637884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	676	Open in IMG/M
3300010039\|Ga0126309_10826539	Not Available	607	Open in IMG/M
3300010039\|Ga0126309_10893350	Not Available	588	Open in IMG/M
3300010039\|Ga0126309_11009137	Not Available	559	Open in IMG/M
3300010039\|Ga0126309_11085643	Not Available	543	Open in IMG/M
3300010040\|Ga0126308_10474690	Not Available	842	Open in IMG/M
3300010040\|Ga0126308_10655517	Not Available	719	Open in IMG/M
3300010041\|Ga0126312_10570689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	812	Open in IMG/M
3300010042\|Ga0126314_10262184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1228	Open in IMG/M
3300010042\|Ga0126314_10474974	Not Available	906	Open in IMG/M
3300010042\|Ga0126314_10905136	Not Available	652	Open in IMG/M
3300010042\|Ga0126314_11113024	Not Available	588	Open in IMG/M
3300010044\|Ga0126310_10227895	Not Available	1243	Open in IMG/M
3300010044\|Ga0126310_10807254	Not Available	722	Open in IMG/M
3300010044\|Ga0126310_11169386	Not Available	616	Open in IMG/M
3300010044\|Ga0126310_11702784	Not Available	523	Open in IMG/M
3300010045\|Ga0126311_10510472	Not Available	941	Open in IMG/M
3300010045\|Ga0126311_11111515	Not Available	650	Open in IMG/M
3300010045\|Ga0126311_11228430	Not Available	621	Open in IMG/M
3300010045\|Ga0126311_11250494	Not Available	615	Open in IMG/M
3300010045\|Ga0126311_11374873	Not Available	588	Open in IMG/M
3300010101\|Ga0127481_1118295	Not Available	506	Open in IMG/M
3300010137\|Ga0126323_1031258	Not Available	586	Open in IMG/M
3300010146\|Ga0126320_1040217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300010146\|Ga0126320_1326608	Not Available	746	Open in IMG/M
3300010166\|Ga0126306_10024854	Not Available	3995	Open in IMG/M
3300010166\|Ga0126306_10139456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1792	Open in IMG/M
3300010166\|Ga0126306_10375805	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300010166\|Ga0126306_10445664	Not Available	1018	Open in IMG/M
3300010166\|Ga0126306_10463543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	998	Open in IMG/M
3300010166\|Ga0126306_10596922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	880	Open in IMG/M
3300010166\|Ga0126306_10635002	Not Available	853	Open in IMG/M
3300010166\|Ga0126306_10949282	Not Available	699	Open in IMG/M
3300010166\|Ga0126306_11099665	Not Available	651	Open in IMG/M
3300010373\|Ga0134128_10239354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2038	Open in IMG/M
3300010375\|Ga0105239_11348383	Not Available	823	Open in IMG/M
3300010395\|Ga0058701_10709500	Not Available	552	Open in IMG/M
3300010397\|Ga0134124_12475135	Not Available	561	Open in IMG/M
3300010401\|Ga0134121_13236930	Not Available	504	Open in IMG/M
3300011119\|Ga0105246_10228357	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300011119\|Ga0105246_10359338	Not Available	1196	Open in IMG/M
3300012212\|Ga0150985_101037635	Not Available	569	Open in IMG/M
3300012212\|Ga0150985_101254095	Not Available	561	Open in IMG/M
3300012212\|Ga0150985_110133912	Not Available	808	Open in IMG/M
3300012212\|Ga0150985_110436851	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300012212\|Ga0150985_112121483	Not Available	1236	Open in IMG/M
3300012212\|Ga0150985_112220055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1716	Open in IMG/M
3300012212\|Ga0150985_113748562	Not Available	511	Open in IMG/M
3300012212\|Ga0150985_115610477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	700	Open in IMG/M
3300012212\|Ga0150985_115816280	Not Available	813	Open in IMG/M
3300012212\|Ga0150985_119087466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2501	Open in IMG/M
3300012212\|Ga0150985_120838879	Not Available	546	Open in IMG/M
3300012212\|Ga0150985_121115779	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300012212\|Ga0150985_121618913	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300012212\|Ga0150985_121939543	Not Available	618	Open in IMG/M
3300012469\|Ga0150984_103030624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	905	Open in IMG/M
3300012469\|Ga0150984_109788595	Not Available	564	Open in IMG/M
3300012469\|Ga0150984_110846807	Not Available	1106	Open in IMG/M
3300012469\|Ga0150984_112485218	Not Available	859	Open in IMG/M
3300012469\|Ga0150984_120086964	Not Available	566	Open in IMG/M
3300012469\|Ga0150984_121713660	Not Available	583	Open in IMG/M
3300012469\|Ga0150984_121760841	Not Available	1277	Open in IMG/M
3300013296\|Ga0157374_12571644	Not Available	537	Open in IMG/M
3300013306\|Ga0163162_10132310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2603	Open in IMG/M
3300013308\|Ga0157375_12215446	Not Available	655	Open in IMG/M
3300014745\|Ga0157377_11604651	Not Available	521	Open in IMG/M
3300015371\|Ga0132258_12697517	Not Available	1239	Open in IMG/M
3300017792\|Ga0163161_11298502	Not Available	632	Open in IMG/M
3300019767\|Ga0190267_10081799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium YIM 77505	1223	Open in IMG/M
3300019767\|Ga0190267_11114481	Not Available	568	Open in IMG/M
3300019767\|Ga0190267_11375914	Not Available	533	Open in IMG/M
3300019767\|Ga0190267_11692996	Not Available	500	Open in IMG/M
3300025901\|Ga0207688_10165667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1312	Open in IMG/M
3300025901\|Ga0207688_10320694	Not Available	951	Open in IMG/M
3300025901\|Ga0207688_10381039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium YIM 77505	872	Open in IMG/M
3300025938\|Ga0207704_10570000	Not Available	923	Open in IMG/M
3300025972\|Ga0207668_10443084	Not Available	1107	Open in IMG/M
3300025972\|Ga0207668_10517481	Not Available	1029	Open in IMG/M
3300026023\|Ga0207677_11087382	Not Available	728	Open in IMG/M
3300026067\|Ga0207678_10602587	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300026089\|Ga0207648_10203777	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300026118\|Ga0207675_100222161	Not Available	1820	Open in IMG/M
3300026118\|Ga0207675_102536619	Not Available	523	Open in IMG/M
3300027514\|Ga0208338_1018973	Not Available	527	Open in IMG/M
3300028379\|Ga0268266_10448895	Not Available	1226	Open in IMG/M
3300028381\|Ga0268264_10782307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium YIM 77505	952	Open in IMG/M
3300028381\|Ga0268264_11526958	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300028381\|Ga0268264_12472807	Not Available	525	Open in IMG/M
3300031091\|Ga0308201_10221530	Not Available	637	Open in IMG/M
3300031099\|Ga0308181_1135113	Not Available	565	Open in IMG/M
3300031100\|Ga0308180_1027258	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031423\|Ga0308177_1025126	Not Available	548	Open in IMG/M
3300034172\|Ga0334913_081109	Not Available	684	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.23%
Host-Associated	Host-Associated	44.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.49%
Plants	Host-Associated → Plants	44.19%
Aquatic	Environmental → Aquatic	1.74%
Human	Host-Associated → Human	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.35%
Freshwater	Environmental → Aquatic → Freshwater	1.74%
Digestive System	Host-Associated → Human → Digestive System	0.58%
Phylloplane	Host-Associated → Plants → Phylloplane	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.02%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.88%
Loam	Environmental → Terrestrial → Soil → Loam	9.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.74%
Sand	Environmental → Terrestrial → Soil → Sand	1.16%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.58%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.58%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	6.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.33%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.74%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.16%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.58%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.58%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	33.14%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	9.30%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	6.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.07%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	4.07%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.33%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.58%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.58%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.58%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.58%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.58%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.58%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003569	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_36 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003570	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_34 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010101	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010137	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027514	Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN91 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031100	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031423	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_148 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_100376434	3300001686	Soil	MRKLKLFGLAFALASAAFVFTMLKEPPKSEASDPTRLTIQPLDIKIQTGIPTGEYDAN*
C688J18823_100886983	3300001686	Soil	DDIMRKLKLFGLAFALASAAFVFTMLKEPPKSDASDPTRLTIQPLDIKIQTGIPTGEYDAN*
C688J18823_102915341	3300001686	Soil	QTRPISSPVVIMHKLKLFGVAFGLAAAAFVLTMLKDPPKSVASDPTKLTIQPLDLKIQTGIPTGEYEAN*
C688J35102_1200212172	3300002568	Soil	MRKFRLFGAAFGLAAAAFAFTMLKDPPKSAASDPTQTIRPLDIKIPTGIPTGEYDAN*
C688J35102_1202138771	3300002568	Soil	FGLAFALASAAFVFTMLKEPPKSDASDPTRLTIQPLDIKIQTGIPTGEYDAN*
C688J35102_1203419631	3300002568	Soil	GLAFGLAAGAFVLTMLKDPPKSVASDPTQTIRPLDLRIQTGDNDAN*
Ga0007420J51693_10498621	3300003569	Avena Fatua Rhizosphere	MSKLKMFGLAFGLAAGAFVLTMLKDPPKSVASDPTQTIRPLDLKIQTGIPTGDYDAN*
Ga0007418J51697_10584981	3300003570	Avena Fatua Rhizosphere	MSKLKMFGLAFGLAAGAFVLTMLKDPPKSVASDPTQTIRPLDLKIQTGIPTGGYDAN*
Ga0063454_1013511922	3300004081	Soil	MRKFKLFGVALALAGAAFVFTMLKDPPKSVASDPTVSIQPLDIKISTGIPTGDYGPSAN*
Ga0063455_1000248982	3300004153	Soil	MHKLKLFGVAFGLAAAAFVLTMLKDPPKSVASDPTKLTIQPLDLKIQTGIPTGEYEAN*
Ga0063455_1004523112	3300004153	Soil	MRSLKLFGVALALAGAAFVFTMLKDPPKSVASGPTQTIQPLDIKISTGIPTGEYDAN*
Ga0063455_1007970101	3300004153	Soil	MRKFRLFGAAFGLAAAASAFTMLKDPPKSAASDPTQTIRPLDIKIPTGIPTGEYDAN*
Ga0063455_1016735221	3300004153	Soil	MSKLKMFGVALALAGAAFVFTMLKDPPKSVASDPTVSIQPLDIKISTGIPTGDYGPSAN*
Ga0062595_1005856093	3300004479	Soil	MRKLKLFGVALALAGAAFVFTMLKDPPKSVAFDPTVSIQPLDIKISTGIPTGDYGPSAN*
Ga0058860_100662372	3300004801	Host-Associated	SEPLATRGIKMRTLKVFGLAFVLAGAAFVFTMLKDPPKSVASDPTQTIQPNEIKIQTGIPSGDYDAN*
Ga0062594_1028680881	3300005093	Soil	KLKLFGVALALAGAAFVLTMLKDPPKSVASDPTVSIQPLDIKISTGIPTGDYGPSAN*
Ga0070658_110176742	3300005327	Corn Rhizosphere	MSKLKMFGLAFALAAGAFVLTMLKDPPKSVAFNPGASIQPLDIKIQTGIPTGEYDAN*
Ga0070670_1006769391	3300005331	Switchgrass Rhizosphere	GVALALAGAAFVFTMLKDPPKSVASDPTVSIQPLDIKISTGIPTGDYGPSAN*
Ga0068868_1009056652	3300005338	Miscanthus Rhizosphere	MSKLKMFGLAFALAAGAFVLTMLKDPPKSVAFNPGASIQPLDIKISTGIPTGDYGPSAN*
Ga0068868_1018646693	3300005338	Miscanthus Rhizosphere	LKMFGLAFGLAAGAFALTMLKDPPKSVASDPTQTIRPLDLKIQTGDYDAN*
Ga0070689_1018507501	3300005340	Switchgrass Rhizosphere	MSKLKMFGLAFGLAAGAFALTMLKDPPKSVASDPTQTIRPLDLKIQTGIPTGD
Ga0070668_1013816101	3300005347	Switchgrass Rhizosphere	MRQLKLFAVAFALAAGAFGLTMLKDPPKSVASDPTVSIQPLDIKISTGIPTGDYGPSAN*
Ga0070671_1015249211	3300005355	Switchgrass Rhizosphere	MSKLKMLGLAFALAAGAFVLTMLKDPPKSVAFNPGATIQPLDIKIQTGIPTGEYDAN*
Ga0070671_1015986601	3300005355	Switchgrass Rhizosphere	EPLATRGIKVRTLKVFGLAFALACAAFVFTMLKDPPKSVASDPTHTIQPNDIKIQTGIPSGDYDAN*
Ga0070701_102324142	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MHKLKLFGVALALAGAAFVFTMLKDPPKSVAFDPTVSIQPLDIKISTGIPTGDYGPSAN*
Ga0070678_1018765441	3300005456	Miscanthus Rhizosphere	MSKLKMFGLAFGLAAGAFVLTMLKDPPKSVAFNPGATIQPLDIKIQTGIPTGEYDAN*
Ga0070662_1004530252	3300005457	Corn Rhizosphere	MRTLKVFGLAFALAGAAFVFTMLKDPPKSVASDPTQTIQPNDIKIQTGIPSGDYDAN*
Ga0070662_1016965171	3300005457	Corn Rhizosphere	MHKLKLFGVALALAGAAFVLTMLKDPPKSVAFDPTVSIQPLDIKISTGIPTGDYGPSAN*
Ga0068867_1008056631	3300005459	Miscanthus Rhizosphere	MSKLKMFGLAFGLAAGAFALMMLKDPPKSVASDPTQVFRPNDLKIQTGIPAGDYDAN*
Ga0070696_1017021001	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSKLKMFGLAFGLAAGAFVLTMLKDPPKSVASDPTQVFRPNDLKIQTGIPTGDYDAN*
Ga0070665_1009641812	3300005548	Switchgrass Rhizosphere	MSKLKMFGLAFGLAAGAFALTMLKDPPKSVASDPTQTIRPLDLKIQTGIPTGDYDAN*
Ga0070665_1023793001	3300005548	Switchgrass Rhizosphere	MSKLKMLCLAFALAAGAFVLTMLKDPPKSVAFNPGASIQPLDIKISTGIPTGDYGPSAN*
Ga0068856_1001671803	3300005614	Corn Rhizosphere	MRTLKVFGLAFVLAGAAFVFTMLKDPPKSVASDPTQTIQPNEIKIQTGIPSGDYDAN*
Ga0070702_1010032381	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKVFGLAFALACAAFGFTMLKDPPKSVASDPTQTIQPKDIKIQTGIPSGDYDAN*
Ga0068864_1002180041	3300005618	Switchgrass Rhizosphere	LKMFGLAVVLASVAFVFTMLKDPPKSVASDPTRLTIQPLDIKIQTAIPIGDYGAAAN*
Ga0068861_1006288673	3300005719	Switchgrass Rhizosphere	LAQLLREPRGGCSHKRTTIRKLKLFGVALALAGAAFVLTMLKDPPKSVAFDPTVSIQPLDIKISTGIPTGDYGPSAN*
Ga0068861_1009821783	3300005719	Switchgrass Rhizosphere	MSKLKMFGLAFGLAAGAFALMMLKDPPKSVASDPTQVFRPNDLKIQTGIPTGDYDAN*
Ga0068863_1018845071	3300005841	Switchgrass Rhizosphere	MRKLKLFGVALALAGAAFVFTMLKDPPRSVASDPTATIQPLDIKISTGIPTGDYGPSAN*
Ga0068860_1016844053	3300005843	Switchgrass Rhizosphere	MRTLKLLGLAFALAGAAFVLTMLKDPPKSVASDPTQTIQPNDIKIQTGIPSGDYDAN*
Ga0082029_11313883	3300006169	Termite Nest	LWSKTMRSLKLLGVSLALAGAAFVFTMLKDPPKSVAFNPGASIQPLDIKISTGIPTGDYGSEAN*
Ga0079222_114273462	3300006755	Agricultural Soil	MGKLKMFGVAVALAGAAFVLTMLKDPPKSAASDPSQAFRPLDLKIQTGIPTGDYQAN*
Ga0105679_104278621	3300007790	Soil	MRKLKLFGLAFALAGAAFVFTMLKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYGA
Ga0105679_108077194	3300007790	Soil	MKKLKMFGLAFALAGAAVVFTMMKDPLKSVASDPTLVTIQPNDIKIQTGIPTGDYGVVAN
Ga0105245_103298022	3300009098	Miscanthus Rhizosphere	MRKLKLFGVALALAGAAFVFTMLKDPPKSVASDPTVSIRPLDIKISTGIPTGDYGPSAN*
Ga0105245_107182942	3300009098	Miscanthus Rhizosphere	MRTLKVFGLAFVLAGAAFVLTMLKDPPKSVASDPTQTIQPNDIKIQTGIPSGDYDAN*
Ga0105245_115341271	3300009098	Miscanthus Rhizosphere	MFGLAFALAAGAFVLTMLKDPPKSVASDQTQVFRPLDLKIQTGIPTGDYDANQVRCPAWRWAAPT
Ga0105245_123696672	3300009098	Miscanthus Rhizosphere	MRTLKLFGLVFALTGAAFVFTMLKDPPKSEASDPTKLAIQPLDIKIQTGILTGEYDAN*
Ga0105247_106233321	3300009101	Switchgrass Rhizosphere	MRTLKVFGLAFALAGAAFVLTMLKDPPKSVASDPTQTIQPNDIKIQTGIPSGDYDAN*
Ga0105243_116919612	3300009148	Miscanthus Rhizosphere	MRKLKLFGVALALAGAAFVFTMLKDPPKSVASDPTVSIQPLDIKISTGIPTGDYGPSAN*
Ga0105237_125858491	3300009545	Corn Rhizosphere	MRKLKLFGVALALAGAAFVFTMLKDLPKSVAFDPTVSIQPLDIKISTGIPTGDYGPSAN*
Ga0105238_101887871	3300009551	Corn Rhizosphere	TLKVFGLAFALAGAAFVFTMLKDPPKSVASDPTHTIQPNDIKIQTGIPSGDYDAN*
Ga0105249_128009911	3300009553	Switchgrass Rhizosphere	MRTLKLFGLAFALAGAAFVFTMLKDPPKSEASDPTKLTIQPLDLKIQTGIPTGEYDAN*
Ga0126307_100614604	3300009789	Serpentine Soil	MRKLKLFGVAFGLAAAAFVFTMLKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYGSAAN*
Ga0126307_100869614	3300009789	Serpentine Soil	MKALKMFGLAFALAGAAFVFTMLKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYGPAAN*
Ga0126307_102417242	3300009789	Serpentine Soil	MHTLKLFGVAFALAAGAFVLTMLKDPPKSVASAPTGTIQPLDIKIQTGIPTGEYDAN*
Ga0126307_104249842	3300009789	Serpentine Soil	MRTIKLLGLALALAAGAFVLTMLKDPPKSEASDPTRLTLQPNDLKIQTGIPTGEYDAN*
Ga0126307_104538411	3300009789	Serpentine Soil	MSKLKMFGLAFALAGAAFVVTMLKDPPKSVAADPTRLTIQPMELKIQTGIPTGEYDAI*
Ga0126307_106909041	3300009789	Serpentine Soil	MIFGAVPSKGNKKRTLKLFGLAPALAVAAFVFTMLKDPPKSVAFDPTLATIQPNHLKVQEGIPTGD*
Ga0126307_110936122	3300009789	Serpentine Soil	MRKLKLFGVAFALAAGAFILTMVKDPPKSVASDPSHTIQPLDIQIQTGIPTGDYGAVAN*
Ga0126307_111465211	3300009789	Serpentine Soil	MRKLKMFGVAFALASAAFVFTMLKDPPKSVAFNPSATIQPNDIKISTGIPTGDYGSEAN*
Ga0126313_105362322	3300009840	Serpentine Soil	MKALKMFGLAFALAGAAFVFTMLKDPPKSVASDPTRTIQPLDIQIQT
Ga0126313_106429001	3300009840	Serpentine Soil	GNKKRTSKLFGLAPALAVAAFVFTMLKDPPKSVAFNRTLATFQPNDLKVQTGIPTGDYAAN*
Ga0126313_110681801	3300009840	Serpentine Soil	MRKLKLFGVAFALAAGAFVLTMLKDPPKSVASDPSRTIQPLDITIQTGIPTGDYGAAAN*
Ga0126313_111675441	3300009840	Serpentine Soil	MRKLKLFGVAFGLAAAAFMLTMLKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYGSAAN*
Ga0126305_101858332	3300010036	Serpentine Soil	MSKLKMFGLAFALTGAAFVVTMLKDPPKSVAADPTRLTIQPMELTIQTGIPTGEYDAI*
Ga0126305_103704401	3300010036	Serpentine Soil	MIFGAVPSKGNKMRTLKLFGLAPALAGAAFVFTMLKDPPKSVAFNPTLATFQPNDLKVQTGIPTGDYEAN*
Ga0126305_104740062	3300010036	Serpentine Soil	MRKLKLFGVAFALAAGAFVLTMLKDPPQSVASDPTRTIQPLDITIQTGIPTGDYGAAAN*
Ga0126304_100961421	3300010037	Serpentine Soil	LFGVAFGLAAAAFVFTMLKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYGSAAN*
Ga0126304_101849753	3300010037	Serpentine Soil	MIFGAVPSKGNKKRTLKLFGLAPALAVAAFVFTMLKDPPKSAAFNPTLATFQPNDLKVQTGIPTGDYEAN*
Ga0126304_101994692	3300010037	Serpentine Soil	MSKLKMFGLAFALAGAAFVVTMLKGPPKSVAADPTRLTIQPMELKIQTGIPTGEYDAI*
Ga0126304_102676641	3300010037	Serpentine Soil	MRTLKLFGLAFALAGAAFVFTMVKDPPRSVASDPTAAVVKSGDVQVPTGIPSADCLTSSVCP*
Ga0126304_109373931	3300010037	Serpentine Soil	KGKTMHTLKMLGIACVLAAGAFILTMVKDPPKSVASDPSHTIQPLDIQIQTGIPTGDYGAVAN*
Ga0126304_110485652	3300010037	Serpentine Soil	MRKLKMFGVAVALASAGFVFTMLKDPPKSVAFNPSATIQPNDIKISTGIPTGEYEAN*
Ga0126315_104072211	3300010038	Serpentine Soil	VAFGLAAAAFVFTMLKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYGSAAN*
Ga0126315_110639671	3300010038	Serpentine Soil	ALKMFGLAFALAGAAFVFTILKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYGPAAN*
Ga0126309_100776851	3300010039	Serpentine Soil	RITMRKLKLLGLALSLAAGAFVLTMLKDPPKSVASDPTRLTIQPNDIQIQTGIPTGSWDAN*
Ga0126309_101162232	3300010039	Serpentine Soil	LIWLIEAFEETIMRTLKLFGVAFGLAAAAFVFTMLKDPPKSVASAPTGTIQPLDIKISTGIPTGEYDAN*
Ga0126309_102628451	3300010039	Serpentine Soil	MKALKMFGLAFALAGAAFVFTMLKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYAAAAN*
Ga0126309_103342552	3300010039	Serpentine Soil	LKVFGMAFGLAAAAFVFTMLKDPPKSVASDPTLPTIQPNGIKVQTGIPTGDYEAN*
Ga0126309_106378841	3300010039	Serpentine Soil	MRKLKLFGVAFGLAAAAFVLTMLKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYGSAAN*
Ga0126309_108265391	3300010039	Serpentine Soil	MRRNIMRTLKMFAIAFALAAGAFVLTMLKDPPKSVASDPSQTIQPLDITIQTGIPTGVYDAF*
Ga0126309_108933501	3300010039	Serpentine Soil	MRKLKLFGVAFGLAAAAFVFTMLKDPPKSVASDPTVTIKPLELKVQSGIPTGEYEAN*
Ga0126309_110091371	3300010039	Serpentine Soil	MRKLKLFGLAFALATGAFVLTMLKDPPKSVASDPTSGLNIQDIQVQTGIPSGSWDAH*
Ga0126309_110856431	3300010039	Serpentine Soil	MSKLKMFGLAFALAGAAFVVTMKDPPKSVAADPTRLTIQPMELTIQTGIPTGEYDAI*
Ga0126308_104746902	3300010040	Serpentine Soil	MHALKLFGVTFALAAGAFVLTMLKDPPKSVASAPTGTIQPLDIKIQTGIPTGEYDAN*
Ga0126308_106555172	3300010040	Serpentine Soil	MRTLKMFGIAFALAAGAFVLSMLKDPPKSVASDPSQTIQPLDITIQTGIPTGVYDAF*
Ga0126312_105706891	3300010041	Serpentine Soil	MRTLKLFGLAFALAGAAFVLTMLKDPPKSVASDPTQTIQPNDIKLQTG
Ga0126314_102621842	3300010042	Serpentine Soil	MKALKMFGLAFALAGAAFVFIMLKGPPKSVASDPTRTIQPLDIQIQTGIPTGDYGPAAN*
Ga0126314_104749742	3300010042	Serpentine Soil	MSKLKMFGLAFALTGAAFVVTMLKDPPKSVAADPTRLTIQPMELKIQTGIPTGEYDAI*
Ga0126314_109051361	3300010042	Serpentine Soil	MIFGAVPSKGNKMRTLKSFCLALAGAAFGSTTLRDPPKSVTSDPTLATIQPNDLKVQTGIPTGDYEAN*
Ga0126314_111130242	3300010042	Serpentine Soil	MRTIKLLGFALALAAGAFVFAMLKDPPKSEASDPTRLTLQPNDLKIQTGIPTGEYDAN*
Ga0126310_102278952	3300010044	Serpentine Soil	MIFGAVPSKGNKKRTLKLFGLAPALAVAAFVFTMLKDPPKSVAFNPTLATFQPNDLKVQTGIPTGDYEAN*
Ga0126310_108072541	3300010044	Serpentine Soil	MRNIMRTSKMFGIAFALAAGAFVLTMLKDPPKSVASDPSQTIQPLDITIQTGIPTGVYDAF*
Ga0126310_111693861	3300010044	Serpentine Soil	MRKLKLFGVAFALAGAAFVFTMLKDPPKSVASDPTQTIRPLDIKISTGIPTGDYDAN*
Ga0126310_117027841	3300010044	Serpentine Soil	LKLFGVAFGLAAAAFVFTMLKDPPKSVASDPTRLTIQPMDLKIQAGIPTGEYDAN*
Ga0126311_105104722	3300010045	Serpentine Soil	MKALKMFGLAFALAGAAFVFTMLKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYGSAAN*
Ga0126311_111115152	3300010045	Serpentine Soil	MRTLKLFGLAFALAGAAFVFTMLKDPPKSVASDPTQTIQPNDIKIQTGIPSGDYDAN*
Ga0126311_112284301	3300010045	Serpentine Soil	MRKLKLFGVAFGLTAAAFVFTMLKDPPKSVASDPTRTIQPLDIQIQTGI
Ga0126311_112504942	3300010045	Serpentine Soil	VGVAFGLAAAAFVFTMLKDPPKSVASDPTRLTIQPMDLKIQTGIPTGEYDAN*
Ga0126311_113748731	3300010045	Serpentine Soil	KLFGLAFALSGAAFVLTMLKDPPKSVASDPTRLTIQPDDLKIQTGIPTGDYDAN*
Ga0127481_11182951	3300010101	Grasslands Soil	MKALKMFGLAVVLASVAFVFTMLKDPPKSVASDPTRLTIQPLDIKIQTGIPTGDYGAV
Ga0126323_10312583	3300010137	Soil	MRKLKLFGVAFGLAAAAFVFTMMKDPPKSVASDPTRLTIQPMDLKIQAGIPTGEYDAN*
Ga0126320_10402172	3300010146	Soil	SKSLATRGIKMRTLKVFGLAFVLAGAAFVFTMLKDPPKSVASDPTQTIQPIEIKIQTGIPSGDYDAN*
Ga0126320_13266083	3300010146	Soil	MRKLKLFGVAFGLAAAAFVFTMLKDPPKSVASDPTRLTIQPMDLKIQTGIPTGEYDAN*
Ga0126306_100248544	3300010166	Serpentine Soil	MKALKMFGLAFALAGAAFVFTMLKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYSPAAN*
Ga0126306_101394561	3300010166	Serpentine Soil	MRKLKLFGVAFALAAGAFALTMLKDPPKSEASDPTRLTIQPNDIQVPTGIPSGDYGAEAN
Ga0126306_103758051	3300010166	Serpentine Soil	NKKRTLKLFGLAPALAVAAFVFTMLKDPPKSVAFNPTLATFQPNDLKVQTGIPTGDYEAN
Ga0126306_104456644	3300010166	Serpentine Soil	PRHKGKTMRKLKMFGVAVALASAGFVFTMLKDPPKSVAFNPSATIQPNDIKISTGIPTGEYEAN*
Ga0126306_104635432	3300010166	Serpentine Soil	MRTIKLLGLALALAAGAFVLTILKDPPKSEASDPTRLTLQPNDLKIQTGIPTGEYDAN*
Ga0126306_105969222	3300010166	Serpentine Soil	MRTLKMLGIACVLAAGAFILTMVKDPPKSVASDPSHTIQPLDIQIQTGIPTGDFGTEAN*
Ga0126306_106350022	3300010166	Serpentine Soil	MRKLKLFGVAFALAAGAFVLTMLKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYGAVAN*
Ga0126306_109492821	3300010166	Serpentine Soil	GLDRIRRSTMSKLKLFGLSFALAGAAFVFTMLKDPPKSVASDPTRTIQPLDITIQTGIPTGAYDAN*
Ga0126306_110996652	3300010166	Serpentine Soil	MRKLKLFGVAFALAGAAFVFTMLKDPPRSEASDPTRLTIQPMDLKIPTGIPTGEYDAN*
Ga0134128_102393542	3300010373	Terrestrial Soil	DDIMRKLKLFGLAFALAGAAFVFTMLKDPPKSVASDPTKLTIQPLDTKIQTGILTGEYDAN*
Ga0105239_113483831	3300010375	Corn Rhizosphere	MSKLKMFGLAFGLAAGAFVLTMLKDPPKSVASDPTQTIRPLDLKIQTGDYDAN*
Ga0058701_107095001	3300010395	Agave	MRKLKMFGVAFGLAAAAFAFTMLKDPPKSVASDPTRTIQPLDIQIQTGIPTGDYGPAAN*
Ga0134124_124751351	3300010397	Terrestrial Soil	RTTMRKLKLFGVALALAGAAFVFTMLKDPPKSVASDPTVSIRPLDIKISTGIPTGDYGPSAN*
Ga0134121_132369301	3300010401	Terrestrial Soil	MRKLKLFGLAFALAGAAFVFTMLKDPPKSEASDPTKLTIQPLDIKIQTGILTGEYDAN*
Ga0105246_102283571	3300011119	Miscanthus Rhizosphere	MKVFGLAFALAGAAFVFTMLKDPPKSVASDPTHTIQPNDMKIQTGIPSGDYDAN*
Ga0105246_103593381	3300011119	Miscanthus Rhizosphere	LKMFGLAFGLAAGAFVLTMLKDPPKSVASDPTQTIRPLDLKIQTGIPTGDYDAN*
Ga0150985_1010376351	3300012212	Avena Fatua Rhizosphere	MRSLKLFGFALALVGAAFVFTMLKDPPKSVASGPTKTIQPLDIKLSTGIPTGEYNAN*
Ga0150985_1012540951	3300012212	Avena Fatua Rhizosphere	AVEEESMRKFRLFGAAFGLAAAAFAFTMLKDPPKSAASDPTQTIRPLDIKIPTGIPTGEYDAN*
Ga0150985_1101339123	3300012212	Avena Fatua Rhizosphere	MRKLKMFGVALALAVAAFVLTMLRDPPKSVAFDPSFTIQPLDIKIPTGIPTGDYGADAN*
Ga0150985_1104368512	3300012212	Avena Fatua Rhizosphere	GLAFVLAGAAFVFTMLKDPPKSVASDPTQTIQPNEIKIQTGIPSGDYDAN*
Ga0150985_1121214831	3300012212	Avena Fatua Rhizosphere	SKPLATRGINMRTLKLLGLAFALAGAAFVFTMLKDPPKSVASDPTQTIQPNEIKIQTGIPSGDYDAN*
Ga0150985_1122200551	3300012212	Avena Fatua Rhizosphere	MGKTMRKLKVFGLAFALAAGAFVLTMLKDPPKSVANDPTRTIQPSDITIQTGIPTGDYGSAAN*
Ga0150985_1137485622	3300012212	Avena Fatua Rhizosphere	MSKMKMFGLAFALAAGAFVLTMVKDPPRSVASDPTRLTIQPNDLKIQTGIPTGDYDAN*
Ga0150985_1156104773	3300012212	Avena Fatua Rhizosphere	VDLAFALAGAAFVFTMLKDPPKSVASDPAAAPVQTLDLRVPTGLPSGEYDAN*
Ga0150985_1158162801	3300012212	Avena Fatua Rhizosphere	MGSRKGYKGKTMRKVKLFGVAFALAGAAFMFTMLKDPPKSVASDPTQTIRPLDIKISTGTPTGDYDAN*
Ga0150985_1190874661	3300012212	Avena Fatua Rhizosphere	MRKLKLFGLAFALASAAFVFTMLKEPPKSDASDPTRLTIQPLDIKIQTGIPTGEYDAN*
Ga0150985_1208388791	3300012212	Avena Fatua Rhizosphere	MRKLKLFGVAFALAGAAFVFTMLKDPPQSVASDPTAATIKSVDIQIPTGIPAGDCLISSVCP*
Ga0150985_1211157792	3300012212	Avena Fatua Rhizosphere	MSKLKMFGLAFALAAGAFILTMLKDPPKSVASDPTQVFQPLDLKIQTGIPTGDYDAN*
Ga0150985_1216189131	3300012212	Avena Fatua Rhizosphere	PLWSTLGGGCNMRRFKLFGVAFGLAVAAFAFTMLKDPPKSVASDPTRTIQPLDIKIQTGIPIGEYDAN*
Ga0150985_1219395432	3300012212	Avena Fatua Rhizosphere	MEKPTMSKLKMFGLAFALAAGAFLLTMLKDPPKSVASDPTKLTVQPLDLKIQTGIPTGEYEAN*
Ga0150984_1030306241	3300012469	Avena Fatua Rhizosphere	QKRTTMRKLKLFGVALALAGAAFVFTMLKDPPKSVASDPTASIQPLDIKISTGIPTGDYGPSAN*
Ga0150984_1097885952	3300012469	Avena Fatua Rhizosphere	HKMRLFGVALVLAGAAFVFTMLREPTPSIPSAPTATIRQLDMMISTAIPTGDQNTK*
Ga0150984_1108468073	3300012469	Avena Fatua Rhizosphere	MRQLKLFAVAFALAAGAFGLTMLKDPPKSVASDPTQTIRPLDIKIQTGIPTGDYDAN*
Ga0150984_1124852181	3300012469	Avena Fatua Rhizosphere	IALARSLWKREPPRHKEKPMRSLKLFGFALALVGAAFVFTMLKDPPKSVASGPTKTIQPLDIKLSTGIPTGEYNAN*
Ga0150984_1200869641	3300012469	Avena Fatua Rhizosphere	WIVMRKLKMFGVAFALASAAFVFTMLKDPPKSVAFNPSATIQPNDIKISTGIPTGDYGSEAN*
Ga0150984_1217136601	3300012469	Avena Fatua Rhizosphere	VRKLKYFGLAFALAGAAFVLTVLEDPPKSAASDPTRLTIQPNDLKIQTGIPTGEYDAN*
Ga0150984_1217608413	3300012469	Avena Fatua Rhizosphere	MRKLKLFGLAFALASAAFVFTMLQEPPKSEASDPTRLTIQPLDIKIQTGIPTGEYDAN*
Ga0157374_125716441	3300013296	Miscanthus Rhizosphere	VFVQSGTGTTIMRKLKLFGLAFALASAAFVFTMLKEPPKSEASDPTRLTIQPKDLKIQTGILTGEYDAN*
Ga0163162_101323103	3300013306	Switchgrass Rhizosphere	MSKLKMFGLAFGLAAGAFALTMLKDPPKSVASDPTQVFRPNDLKIQTGIPTGDYDAN*
Ga0157375_122154463	3300013308	Miscanthus Rhizosphere	MSKLKMFGLAFGLAAGAFALTMLKDPPKSVASDPTQTIRPLDLKIQTGDYDAN*
Ga0157377_116046511	3300014745	Miscanthus Rhizosphere	LAFALAGAAFVFTMLKDPPKSEASDPTKLTIQPLDTKIQTGIRTGEYDAN*
Ga0132258_126975171	3300015371	Arabidopsis Rhizosphere	RSSAMSKLKMFGLAFGLAAGAFALTMLKDPPKSVASDPTQTIRPLDLKIQTGIPTGDYDAN*
Ga0163161_112985022	3300017792	Switchgrass Rhizosphere	LALAGAAFVFTMLKDAPKSVAFDPTVSIQPLDIKISTGIPTGDYGPSAN
Ga0190267_100817991	3300019767	Soil	MRTLKLFGLAFALAGAAFVLAMLKDPPKSVASDPTQTIQPNDIKIQTGIPSGDYDAN
Ga0190267_111144811	3300019767	Soil	MSKMKMFGLAFALAAGAFVLTMVKDPPRSVASDPTRLTIQPNDLKIQTGIPTGDYDAN
Ga0190267_113759141	3300019767	Soil	MRKLKMFGVAFALASAAFVFTMLKDPPKSVAFNPSATIQPNDIKISTGIPTGDYGSEAN
Ga0190267_116929961	3300019767	Soil	MRTLKLFGLAFALAGAAFVFTMLKDPPKSGASDPTTRLTIHPNDLQIQTGIPSGDYDAN
Ga0207688_101656671	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSKLKMFGLAFGLAAGAFVLTMLKDPPKSVASDPTQTIRPLDLKIQTGIPTGDYDAN
Ga0207688_103206942	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRKLKLFGVALALAGAAFVFTMLKDPPKSVASDPTVSIQPLDIKISTGIPTGDYGPSAN
Ga0207688_103810393	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKVFGLAFALAGAAFGFTMLKDPPKSVASDPTRLTIQPKDIKIQTGIPSGDYDAN
Ga0207704_105700002	3300025938	Miscanthus Rhizosphere	MRKLKLFGVALALAGAAFVFTMLKDPPKSVAFDPTVSIQPLDIKISTGIPTGDYGPSAN
Ga0207668_104430843	3300025972	Switchgrass Rhizosphere	MFGLAFGLAAGAFVLTMLKDPPKSVASDPIRTIRPLDLRIQTGDNDAN
Ga0207668_105174811	3300025972	Switchgrass Rhizosphere	MSKLKMFGLAFGLAAGAFALTMLKDPPKSVASDPTQVFRPNDLKIQTGIPAGDYDAN
Ga0207677_110873821	3300026023	Miscanthus Rhizosphere	MSKLKMFGLAFGLAAGAFALTMLKDPPKSVASDPTQTIRPLDLKIQTGDYDA
Ga0207678_106025871	3300026067	Corn Rhizosphere	MSKLKMFGLAFGLAAGAFVLTMLKDPPKSVAFNPGATIQPLDIKIQTGIPTGEYDAN
Ga0207648_102037773	3300026089	Miscanthus Rhizosphere	LAQLLREPRGGCSHKRTTIRKLKLFGVALALAGAAFVLTMLKDPPKSVAFDPTVSIQPLDIKISTGIPTGDYGPSAN
Ga0207675_1002221612	3300026118	Switchgrass Rhizosphere	MSKLKMFGLAFGLAAGAFALMMLKDPPKSVASDPTQVFRPNDLKIQTGIPTGDYDAN
Ga0207675_1025366191	3300026118	Switchgrass Rhizosphere	MHKLKLFGVALALAGAAFVLTMLKDPPKSVAFDPTVSIQPLDIKISTGIPTGDYGPSAN
Ga0208338_10189732	3300027514	Soil	MRTLKLFRLAFALAGAAFVFTMLKDPPKSVASDPTQTIQPNDIKIQTGIPSGDYDAN
Ga0268266_104488953	3300028379	Switchgrass Rhizosphere	MSKLKMFGLAFGLAAGAFALTMLKDPPKSVASDPTQTIRPLDLKIQTGIPTGDYDAN
Ga0268264_107823071	3300028381	Switchgrass Rhizosphere	VRTLKVFGLAFALAGAAFVFTMLKDPPKSVASDPTQTIQPNDIKIQTGIPSGDYDAN
Ga0268264_115269581	3300028381	Switchgrass Rhizosphere	MSKLKMLGLAFALAAGAFVLTMLKDPPKSVAFNPGATIQPLDIKIQTGIPTGEYDAN
Ga0268264_124728071	3300028381	Switchgrass Rhizosphere	MSKLKMFGLAFALAAGAFVLTMLKDPPKSVAFNPGASIQPLDIKISTGIPTGDYGPSAN
Ga0308201_102215302	3300031091	Soil	MRKLKLFGVAFGLAAAAFVFTMLKDPPKSVASDPTRLTIQPMDLKIQTGIPTGEYDAN
Ga0308181_11351131	3300031099	Soil	ANYKGDNMRTLKLFGLAFALAGAAFVFTMLKDPPKSVASAPTGTIQPNDIKISTGIPTGNYDAN
Ga0308180_10272581	3300031100	Soil	GAVSYKRNEMRTLKLFGLAFALAGAAFVLTMLKDPPKSVASAPTGTIQPNDIKISTGIPTGNYDAN
Ga0308177_10251261	3300031423	Soil	SYKGNEMRTLKLFGLAFALAGAAFVFTMFKDPPKSVASAPTGTIQPNDIKISTGIPTGNYDAN
Ga0334913_081109_187_363	3300034172	Sub-Biocrust Soil	MRKLKLFGVAFGLAAAAFVFTMLKDPPKSVASDPTRLTIQPLDLKVQTGIPTGDYEAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035470

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences