Metagenome Family F035898

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035898
Family Type	Metagenome
Number of Sequences	171
Average Sequence Length	50 residues
Representative Sequence	MRWLAGLLLVAALLGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNL
Number of Associated Samples	121
Number of Associated Scaffolds	171

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.22 %
% of genes near scaffold ends (potentially truncated)	26.32 %
% of genes from short scaffolds (< 2000 bps)	74.85 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.076 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.468 % of family members)
Environment Ontology (ENVO)	Unclassified (29.825 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.105 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 31.17% β-sheet: 5.19% Coil/Unstructured: 63.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 171 Family Scaffolds
PF00216	Bac_DNA_binding	32.75
PF02585	PIG-L	12.28
PF02518	HATPase_c	7.02
PF02738	MoCoBD_1	5.85
PF00072	Response_reg	3.51
PF13414	TPR_11	2.92
PF08281	Sigma70_r4_2	2.34
PF11799	IMS_C	2.34
PF01323	DSBA	1.75
PF01186	Lysyl_oxidase	1.75
PF12681	Glyoxalase_2	1.75
PF01040	UbiA	1.17
PF00106	adh_short	0.58
PF04365	BrnT_toxin	0.58
PF01925	TauE	0.58
PF00343	Phosphorylase	0.58
PF04392	ABC_sub_bind	0.58
PF08028	Acyl-CoA_dh_2	0.58
PF05598	DUF772	0.58
PF12441	CopG_antitoxin	0.58
PF00903	Glyoxalase	0.58
PF13510	Fer2_4	0.58
PF12833	HTH_18	0.58
PF04134	DCC1-like	0.58
PF02566	OsmC	0.58
PF14559	TPR_19	0.58
PF01740	STAS	0.58
PF13714	PEP_mutase	0.58
PF00355	Rieske	0.58
PF08349	DUF1722	0.58
PF00528	BPD_transp_1	0.58
PF00210	Ferritin	0.58
PF01988	VIT1	0.58
PF04545	Sigma70_r4	0.58
PF12867	DinB_2	0.58
PF13185	GAF_2	0.58
PF02322	Cyt_bd_oxida_II	0.58

COG ID	Name	Functional Category	% Frequency in 171 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	32.75
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	12.28
COG1294	Cytochrome bd-type quinol oxidase, subunit 2	Energy production and conversion [C]	0.58
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.58
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.58
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.58
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.58
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.58
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.58
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.58
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.58
COG3272	Uncharacterized conserved protein YbgA, DUF1722 family	Function unknown [S]	0.58
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.58
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.58

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.08 %
Unclassified	root	N/A	2.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.08 %
Unclassified	root	N/A	2.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.08 %
Unclassified	root	N/A	2.92 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	21.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.94 %
Unclassified	root	N/A	2.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.58 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.58 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	21.05 %
Unclassified	root	N/A	2.92 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.58 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.58 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	21.05 %
Unclassified	root	N/A	2.92 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.58 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.58 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	21.05 %
Unclassified	root	N/A	2.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.58 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.58 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	21.05 %
Unclassified	root	N/A	2.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.58 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.58 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17290777	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
2199352025\|deepsgr__Contig_61019	All Organisms → cellular organisms → Bacteria → Proteobacteria	2897	Open in IMG/M
2228664022\|INPgaii200_c1011038	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300001661\|JGI12053J15887_10481734	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300002120\|C687J26616_10060937	All Organisms → cellular organisms → Bacteria → Proteobacteria	1283	Open in IMG/M
3300002908\|JGI25382J43887_10430796	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300003994\|Ga0055435_10150738	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300003995\|Ga0055438_10024425	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300003995\|Ga0055438_10043850	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300004009\|Ga0055437_10040064	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300004019\|Ga0055439_10290690	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300004267\|Ga0066396_10005062	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300004268\|Ga0066398_10188925	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300004633\|Ga0066395_10122427	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300004633\|Ga0066395_10266986	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300005166\|Ga0066674_10542903	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005174\|Ga0066680_10751734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300005176\|Ga0066679_10035088	All Organisms → cellular organisms → Bacteria	2795	Open in IMG/M
3300005181\|Ga0066678_10274125	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1097	Open in IMG/M
3300005181\|Ga0066678_10634765	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005186\|Ga0066676_10936975	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005332\|Ga0066388_100653258	All Organisms → cellular organisms → Bacteria	1666	Open in IMG/M
3300005332\|Ga0066388_102091391	Not Available	1018	Open in IMG/M
3300005332\|Ga0066388_105573295	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300005332\|Ga0066388_108147760	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005332\|Ga0066388_108258984	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005354\|Ga0070675_100999745	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005445\|Ga0070708_100191109	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300005445\|Ga0070708_100241708	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300005445\|Ga0070708_100266326	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300005446\|Ga0066686_10165502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1468	Open in IMG/M
3300005446\|Ga0066686_10587572	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005447\|Ga0066689_10016203	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3544	Open in IMG/M
3300005467\|Ga0070706_100347368	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1383	Open in IMG/M
3300005471\|Ga0070698_100439985	All Organisms → cellular organisms → Bacteria → Proteobacteria	1239	Open in IMG/M
3300005536\|Ga0070697_100211556	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300005552\|Ga0066701_10065870	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2038	Open in IMG/M
3300005558\|Ga0066698_10001602	All Organisms → cellular organisms → Bacteria	10011	Open in IMG/M
3300005558\|Ga0066698_10341681	All Organisms → cellular organisms → Bacteria → Proteobacteria	1035	Open in IMG/M
3300005713\|Ga0066905_100000987	All Organisms → cellular organisms → Bacteria → Proteobacteria	9200	Open in IMG/M
3300005713\|Ga0066905_100341943	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300005764\|Ga0066903_100045425	All Organisms → cellular organisms → Bacteria → Proteobacteria	5260	Open in IMG/M
3300005764\|Ga0066903_100602952	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300005764\|Ga0066903_100606875	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300005764\|Ga0066903_100719982	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300005764\|Ga0066903_102744530	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	955	Open in IMG/M
3300005764\|Ga0066903_106326922	Not Available	618	Open in IMG/M
3300006173\|Ga0070716_101379037	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300006755\|Ga0079222_12070946	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300006852\|Ga0075433_10526278	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300006854\|Ga0075425_100002761	All Organisms → cellular organisms → Bacteria	17618	Open in IMG/M
3300006854\|Ga0075425_101067988	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300006854\|Ga0075425_102096095	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300006871\|Ga0075434_101760720	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300006904\|Ga0075424_100096309	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3117	Open in IMG/M
3300006904\|Ga0075424_100477265	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300009038\|Ga0099829_10000942	All Organisms → cellular organisms → Bacteria	15569	Open in IMG/M
3300009038\|Ga0099829_10047882	All Organisms → cellular organisms → Bacteria	3152	Open in IMG/M
3300009089\|Ga0099828_10570808	Not Available	1019	Open in IMG/M
3300009090\|Ga0099827_10086445	All Organisms → cellular organisms → Bacteria → Proteobacteria	2462	Open in IMG/M
3300009792\|Ga0126374_10005430	All Organisms → cellular organisms → Bacteria	4489	Open in IMG/M
3300009792\|Ga0126374_10038662	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2316	Open in IMG/M
3300009792\|Ga0126374_10320990	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300009792\|Ga0126374_10377305	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300009792\|Ga0126374_10945927	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300010043\|Ga0126380_10113590	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300010043\|Ga0126380_10388813	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1031	Open in IMG/M
3300010043\|Ga0126380_10482820	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300010046\|Ga0126384_10010641	All Organisms → cellular organisms → Bacteria	5713	Open in IMG/M
3300010046\|Ga0126384_10372188	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1197	Open in IMG/M
3300010047\|Ga0126382_10056258	All Organisms → cellular organisms → Bacteria	2334	Open in IMG/M
3300010047\|Ga0126382_11276092	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	662	Open in IMG/M
3300010048\|Ga0126373_10214416	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300010048\|Ga0126373_11011607	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	897	Open in IMG/M
3300010358\|Ga0126370_10685490	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	898	Open in IMG/M
3300010359\|Ga0126376_10148253	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1875	Open in IMG/M
3300010359\|Ga0126376_10409909	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1224	Open in IMG/M
3300010360\|Ga0126372_11450003	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300010361\|Ga0126378_10793821	All Organisms → cellular organisms → Bacteria → Proteobacteria	1056	Open in IMG/M
3300010366\|Ga0126379_12397502	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300010376\|Ga0126381_105111846	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300010391\|Ga0136847_11608403	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	651	Open in IMG/M
3300010391\|Ga0136847_12757988	Not Available	578	Open in IMG/M
3300010398\|Ga0126383_10517089	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300011269\|Ga0137392_10538414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	970	Open in IMG/M
3300011270\|Ga0137391_10190501	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300011271\|Ga0137393_10055018	All Organisms → cellular organisms → Bacteria	3127	Open in IMG/M
3300012096\|Ga0137389_10092607	All Organisms → cellular organisms → Bacteria	2385	Open in IMG/M
3300012096\|Ga0137389_11001478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	716	Open in IMG/M
3300012202\|Ga0137363_10000337	All Organisms → cellular organisms → Bacteria	26414	Open in IMG/M
3300012204\|Ga0137374_10057824	All Organisms → cellular organisms → Bacteria	3924	Open in IMG/M
3300012206\|Ga0137380_10183341	All Organisms → cellular organisms → Bacteria → Proteobacteria	1903	Open in IMG/M
3300012207\|Ga0137381_10030494	All Organisms → cellular organisms → Bacteria → Proteobacteria	4348	Open in IMG/M
3300012209\|Ga0137379_10064509	All Organisms → cellular organisms → Bacteria → Proteobacteria	3525	Open in IMG/M
3300012209\|Ga0137379_10843146	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300012349\|Ga0137387_10267200	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1235	Open in IMG/M
3300012350\|Ga0137372_10164238	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300012350\|Ga0137372_10234808	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300012359\|Ga0137385_10033889	All Organisms → cellular organisms → Bacteria	4581	Open in IMG/M
3300012359\|Ga0137385_10217654	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300012362\|Ga0137361_11049099	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300012363\|Ga0137390_10002414	All Organisms → cellular organisms → Bacteria	14785	Open in IMG/M
3300012532\|Ga0137373_10576955	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	850	Open in IMG/M
3300012532\|Ga0137373_11210011	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012582\|Ga0137358_11040732	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012685\|Ga0137397_10001654	All Organisms → cellular organisms → Bacteria → Proteobacteria	15605	Open in IMG/M
3300012927\|Ga0137416_10444113	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300012929\|Ga0137404_10009649	All Organisms → cellular organisms → Bacteria	6645	Open in IMG/M
3300012929\|Ga0137404_10360767	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300014269\|Ga0075302_1012980	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300014269\|Ga0075302_1138586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300015241\|Ga0137418_10815610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	697	Open in IMG/M
3300015358\|Ga0134089_10096278	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300018075\|Ga0184632_10361538	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300018077\|Ga0184633_10022170	All Organisms → cellular organisms → Bacteria	3145	Open in IMG/M
3300018431\|Ga0066655_10547305	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300018433\|Ga0066667_11016647	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300018482\|Ga0066669_10247603	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300019458\|Ga0187892_10000362	All Organisms → cellular organisms → Bacteria	120906	Open in IMG/M
3300019487\|Ga0187893_10059929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3733	Open in IMG/M
3300019487\|Ga0187893_10109836	All Organisms → cellular organisms → Bacteria → Proteobacteria	2387	Open in IMG/M
3300020170\|Ga0179594_10155949	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300021080\|Ga0210382_10510017	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300021560\|Ga0126371_10218600	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300021560\|Ga0126371_11244589	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300025549\|Ga0210094_1020166	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300025569\|Ga0210073_1004255	All Organisms → cellular organisms → Bacteria	2735	Open in IMG/M
3300025910\|Ga0207684_10029758	All Organisms → cellular organisms → Bacteria	4649	Open in IMG/M
3300025910\|Ga0207684_10522905	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1016	Open in IMG/M
3300025910\|Ga0207684_10700089	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300025922\|Ga0207646_10018219	All Organisms → cellular organisms → Bacteria	6554	Open in IMG/M
3300026089\|Ga0207648_10730107	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300026326\|Ga0209801_1272352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
3300026332\|Ga0209803_1199511	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	738	Open in IMG/M
3300026334\|Ga0209377_1213296	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300026351\|Ga0257170_1041442	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300026377\|Ga0257171_1103936	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300026497\|Ga0257164_1074659	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	568	Open in IMG/M
3300026497\|Ga0257164_1090254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300027846\|Ga0209180_10031483	All Organisms → cellular organisms → Bacteria	2859	Open in IMG/M
3300027846\|Ga0209180_10750043	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300027846\|Ga0209180_10786046	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511	Open in IMG/M
3300027874\|Ga0209465_10009911	All Organisms → cellular organisms → Bacteria	4224	Open in IMG/M
3300027875\|Ga0209283_10098922	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300028047\|Ga0209526_10197544	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300031231\|Ga0170824_111074293	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300031469\|Ga0170819_16095155	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031549\|Ga0318571_10013179	All Organisms → cellular organisms → Bacteria	2013	Open in IMG/M
3300031668\|Ga0318542_10099129	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300031681\|Ga0318572_10044902	All Organisms → cellular organisms → Bacteria	2361	Open in IMG/M
3300031736\|Ga0318501_10000775	All Organisms → cellular organisms → Bacteria → Proteobacteria	8587	Open in IMG/M
3300031740\|Ga0307468_100601849	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300031740\|Ga0307468_101088695	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300031740\|Ga0307468_102022784	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300031740\|Ga0307468_102078630	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031770\|Ga0318521_10192667	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300031796\|Ga0318576_10388114	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	660	Open in IMG/M
3300031897\|Ga0318520_10583629	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300031947\|Ga0310909_10297086	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300031965\|Ga0326597_10219637	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300032068\|Ga0318553_10093166	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300032770\|Ga0335085_10042768	All Organisms → cellular organisms → Bacteria	6196	Open in IMG/M
3300032782\|Ga0335082_11663803	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300032829\|Ga0335070_10000355	All Organisms → cellular organisms → Bacteria	53141	Open in IMG/M
3300032829\|Ga0335070_10009210	All Organisms → cellular organisms → Bacteria → Proteobacteria	11585	Open in IMG/M
3300032954\|Ga0335083_10209097	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300033004\|Ga0335084_10436424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1347	Open in IMG/M
3300033233\|Ga0334722_10973581	Not Available	598	Open in IMG/M
3300033432\|Ga0326729_1008882	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300033805\|Ga0314864_0168721	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300033807\|Ga0314866_063403	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.74%
Host-Associated	Host-Associated	5.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.13%
Aquatic	Environmental → Aquatic	7.60%
Plants	Host-Associated → Plants	5.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.68%
Marine	Environmental → Aquatic → Marine	4.09%
Freshwater	Environmental → Aquatic → Freshwater	2.34%
Cave	Environmental → Terrestrial → Cave	1.75%
Sediment	Environmental → Aquatic → Sediment	1.17%
Peat	Environmental → Terrestrial → Peat	0.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.23%
Loam	Environmental → Terrestrial → Soil → Loam	18.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.85%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.09%
Lake	Environmental → Aquatic → Freshwater → Lake	1.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.85%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.09%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.58%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.58%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.43%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.09%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.34%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.17%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.17%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.17%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.58%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.58%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.58%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01226330	2088090014	Soil	MRLLAGLLLVAALLAGCAGWSQTPYNPQQACDSVGGVLTRDGRCLTGNM
deepsgr_00764230	2199352025	Soil	MRLLAGLLLVAALLAGCAGWSQTPYNPQQACDIVGGVLTRDGRCLAGNL
INPgaii200_10110382	2228664022	Soil	MRGLAGLLLVAALLGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNL
JGI12053J15887_104817341	3300001661	Forest Soil	VGVFLGAVLVAAALLGGCAGWLDTPYNPQQACDSVGGTLLSDGRCLGGG
C687J26616_100609373	3300002120	Soil	MRLVVGVLLVAAVLLWVRRVSQTPYNPQQACDIVGDFLTADGRCLAGNS*
JGI25382J43887_104307961	3300002908	Grasslands Soil	PSSLPRVPMVEVTDMRILLGAVLVVAMFMSGCAGWSQTPFSERQSCDAVGGRLTSDGRCLAGSQ*
Ga0055435_101507382	3300003994	Natural And Restored Wetlands	MRFVAGVLLVAAALLGGCAGWSQTPYNPQQACDGVGGYLTTDGRCIAGN*
Ga0055438_100244254	3300003995	Natural And Restored Wetlands	VVPVRLLLGGLLAAATLLGGCAGWSRTPYNPQQACDIVGGRLAADGRCLAGN*
Ga0055438_100438502	3300003995	Natural And Restored Wetlands	MGWLAVLLLAAALLGGCAGWSQTPYNPQQACDSVGGFLTADGRCLAGN*
Ga0055437_100400642	3300004009	Natural And Restored Wetlands	MRFVAGVLMVAAALLGGCAGWAQTPYSPQQACDAVGGRLAPDGRCRAGN*
Ga0055439_102906902	3300004019	Natural And Restored Wetlands	MRLLAGVLLVVALPLAGCAGWSQTPYNPQLACDSVGGTLTSDGRCLAGN*
Ga0066396_100050623	3300004267	Tropical Forest Soil	MRWLAGLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGR
Ga0066398_101889252	3300004268	Tropical Forest Soil	MRWLAGLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM*
Ga0066395_101224273	3300004633	Tropical Forest Soil	MRWLGGLLLVAALCGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNM*
Ga0066395_102669863	3300004633	Tropical Forest Soil	MRWLVGVLLFAVALAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNM*
Ga0066674_105429032	3300005166	Soil	VGVFLGAVLVAAALLGGCAGWLDTPYNPQQACDSVGGTLLSDGRCLGGGM*
Ga0066680_107517342	3300005174	Soil	MVEVTDMRILLGAVLVVAMLMSGCAGWSQTPFSERQSCDAVGGWLTSDGRCLAGSQ
Ga0066679_100350884	3300005176	Soil	MRILLGAVLVVAMLMSGCAGWSQTPFSERQSCDAVGGRLTSDGRCLAGSQ*
Ga0066678_102741253	3300005181	Soil	MRILLGAVLVVAMLMSGCAGWSQTPFSERQACDAVGGWLTSDRRCLAGSQ*
Ga0066678_106347652	3300005181	Soil	VGVFLGAVLVAAALLGGCAGWLDTPYNPQQACASVGGTLLSDGRCLGGGM*
Ga0066676_109369751	3300005186	Soil	MRVFLGAVLVVAILLGGCAGWSQTPYNPQQFCDSVGGTLTSDGRCLAGNN*
Ga0066388_1006532583	3300005332	Tropical Forest Soil	MQVLLVMMLLAAALTAGCGISSTPYNGQQACDIVGGRYTPDGRCLAGNS*
Ga0066388_1020913911	3300005332	Tropical Forest Soil	MRVILGMLLVAGALLGGCASWPQTPNNGRQACDIVGGFYTADGRCIAGNT*
Ga0066388_1055732951	3300005332	Tropical Forest Soil	RWLAGVLLFAVALAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNL*
Ga0066388_1081477602	3300005332	Tropical Forest Soil	MRWLVGVLLFAVALAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLTGNT*
Ga0066388_1082589842	3300005332	Tropical Forest Soil	MRWMAGVLLFAVALTGGCAGWSQTPYNPQQACDSAGGVLTADGRCLAGNL*
Ga0070675_1009997452	3300005354	Miscanthus Rhizosphere	MRLLAGLLLVAALLTGCAGWSQTPYNPQQACDIVGGVLTRDGRCLAGNL*
Ga0070708_1001911092	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRIIVGAVIGLTMLLGGCAGWSQTPFNGRQACDAVGGEYTSDGRCLAGNL*
Ga0070708_1002417083	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLAGLLLVAALLGGCAGWSQTPFNPKQACDAVGGMLTADGRCLGGNL*
Ga0070708_1002663263	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRVFLGAVLVVAVLLGGCAGWSQTPYNPQQFCDSVGGTLTSDGRCLAGNN*
Ga0066686_101655022	3300005446	Soil	MVEGTDMRILLGAVLVVAMLMSGCAGWSQTPFSERQSCDAVGGWLTSDGRCLAGSQ*
Ga0066686_105875722	3300005446	Soil	MRWLAGLLLVAALLGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNL*
Ga0066689_100162033	3300005447	Soil	MRILLGAVLVVAMLMSGCAGWSQTAFSERQSCDAVGGWLTSDGRCLAGSQ*
Ga0070706_1003473683	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVLGAVLVVAMLMSGCAGWSQTPFSERQSCDAVGGWLTSDGRCLAGNQ*
Ga0070698_1004399851	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRARLRAVLVAAILLGGCAGWSQTPFNGRQACDAVAGEYTSDGRCLAGNQ*
Ga0070697_1002115564	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLAGLLLVVAVLLGGCAGWSQTPYNPQQACDIVGGTLTSDGRCLAGN*
Ga0066701_100658703	3300005552	Soil	MRILLGAVLVVAMLMSGCAGWSQTPFSERQSCDAVGGWLTSDGRCLAGSQ*
Ga0066698_100016025	3300005558	Soil	MVEVTDMRILLGAVLVVAMLMSGCAGWSQTPFSERQSCDAVGGRLTSDGRCLAGSQ*
Ga0066698_103416813	3300005558	Soil	MRWLAGLLLVAALLGGCAGWSQTPYNPQQACDIVGGVLTADGRCLA
Ga0066905_1000009876	3300005713	Tropical Forest Soil	MRWMAGVLLFAVALTGGCAGWSQTPYNPQQACDSAAGVLTADGRCLAGNL*
Ga0066905_1003419432	3300005713	Tropical Forest Soil	MRWLGGLLLVATLCGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNL*
Ga0066903_1000454256	3300005764	Tropical Forest Soil	VRIALWLVLAASVLLGGCAGWTGTPYNGQQACDIVGGIYTPDGRCQAGNN*
Ga0066903_1006029522	3300005764	Tropical Forest Soil	MRLARLGLGALLAAAALLAGCGLPQTPYNGQQACDAVGGMYTADGRCLAGNS*
Ga0066903_1006068753	3300005764	Tropical Forest Soil	MQVLLVVMLLAAALTAGCGISSTPYNGQQACDIVGGRYTPDGRCLAGNS*
Ga0066903_1007199821	3300005764	Tropical Forest Soil	MRWLVGVLLFAVALAGGCAGWSQTPYNPRQACDIVGGVLTADGRCL
Ga0066903_1027445303	3300005764	Tropical Forest Soil	MRLARLGLAAVLAAAALLAGCGLPQTPYNGQQACDAVGGIYTADGRCQAGNN*
Ga0066903_1063269222	3300005764	Tropical Forest Soil	MRVILGMLLVAGALLGGCASWPQTPYNGRQACDIVGGSYTADGRCIAGNT*
Ga0070716_1013790371	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLAGLLLVAALLAGCAGWSQTPYNPQQACDIVGGVLTRDGRCLAGNL*
Ga0079222_120709462	3300006755	Agricultural Soil	MRWLAGGLLLTAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNI*
Ga0075433_105262782	3300006852	Populus Rhizosphere	MRGLAGLLLVGALLGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNL*
Ga0075425_10000276111	3300006854	Populus Rhizosphere	MRWLAGGLLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNI*
Ga0075425_1010679882	3300006854	Populus Rhizosphere	MRIIVGAVIGLAMLLGGCAGWSQTPFNGRQACDAVGGEYTSDGRCLAGNM*
Ga0075425_1020960951	3300006854	Populus Rhizosphere	LVPMRVFLGAVLVVAILLGGCAGWSQTPYNPQQFCDSVGGTLTSDGRCLAGNN*
Ga0075434_1017607202	3300006871	Populus Rhizosphere	MRILLGAVLVAAMLMSGCAGWSQTPFSERQSCDAVGGWLTSDGRCLAGSQ*
Ga0075424_1000963092	3300006904	Populus Rhizosphere	MRILLGAAVLVAAMLMSGCAGWSQTPFSERQSCDAVGGWLTSDGRCLAGSQ*
Ga0075424_1004772653	3300006904	Populus Rhizosphere	MRGLAGLLLVAALLGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNL*
Ga0099829_100009428	3300009038	Vadose Zone Soil	MSLLAAMLAAAALCGGCAGWSQTPYNPQQACDIVGGTLTADGRCLAGN*
Ga0099829_100478824	3300009038	Vadose Zone Soil	MRIIVGAVIGLAMALGGCAGWSQTPFNGRQACDAVGGEYTSDGRCLAGNM*
Ga0099828_105708081	3300009089	Vadose Zone Soil	PTRLPLGVVLAAPALVGGCAGWSQTPYNPQQACDIVGGRLTADGR*
Ga0099827_100864453	3300009090	Vadose Zone Soil	MRMSLLAAMLAAAALCGGCAGWSQTPYNPQQACDIVGGTLTADGRCLAGN*
Ga0126374_100054306	3300009792	Tropical Forest Soil	MRWLVGVLLFAVALAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLTGNM*
Ga0126374_100386622	3300009792	Tropical Forest Soil	MRMRWLAGLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM*
Ga0126374_103209902	3300009792	Tropical Forest Soil	MRLLFAALLAAAALAGGCSGLPQTPYDGSLSCTSIGGTYTADGRCLAGNT*
Ga0126374_103773051	3300009792	Tropical Forest Soil	MRWLGGLLLLAALCGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNM*
Ga0126374_109459272	3300009792	Tropical Forest Soil	MRWLVVMLLLAAASTAGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM*
Ga0126380_101135903	3300010043	Tropical Forest Soil	MRWLAGVLLFAVALAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLTGNM*
Ga0126380_103888133	3300010043	Tropical Forest Soil	MRWLVVMLLLAAASTAGCAGWSQTPYNPQQACDSVGGVLTVDGRCLAGNM*
Ga0126380_104828202	3300010043	Tropical Forest Soil	MRWLAGLVFLTAVLAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNM*
Ga0126384_100106413	3300010046	Tropical Forest Soil	MRWLAGVLLFAVALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM*
Ga0126384_103721883	3300010046	Tropical Forest Soil	MRMRWLTGLALLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM*
Ga0126382_100562581	3300010047	Tropical Forest Soil	MRWLAGLALLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM*
Ga0126382_112760921	3300010047	Tropical Forest Soil	ARRSSRMRWLAGLVFLTAVLAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNM*
Ga0126373_102144162	3300010048	Tropical Forest Soil	MRWLVGVLLFAVALAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNL*
Ga0126373_110116071	3300010048	Tropical Forest Soil	GVLLFAAALAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNL*
Ga0126370_106854901	3300010358	Tropical Forest Soil	MRWLAGVLLFAVALAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNM*
Ga0126376_101482531	3300010359	Tropical Forest Soil	MRIVLGAVLMAAMLMAGCAGWSQTPFNGRQSCDAVGGTYTSDGRCLAGNQ*
Ga0126376_104099092	3300010359	Tropical Forest Soil	MRMRWLARLVFLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM*
Ga0126372_114500032	3300010360	Tropical Forest Soil	MRWLGGVLLFAAALAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNL*
Ga0126378_107938211	3300010361	Tropical Forest Soil	MRMRWLAGLMLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCL
Ga0126379_123975022	3300010366	Tropical Forest Soil	MRWRLGVLLFAVALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM*
Ga0126381_1051118461	3300010376	Tropical Forest Soil	GLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM*
Ga0136847_116084032	3300010391	Freshwater Sediment	MRFVAVVLLAAAALLGGCAGWSQTPYNPQQACDAVGGRLTADGRCLAGSM*
Ga0136847_127579882	3300010391	Freshwater Sediment	VLAAAALLGGCAGWSQTPYNPQQACDIVGGFLTADGRCKAGD*
Ga0126383_105170893	3300010398	Tropical Forest Soil	MRLARLGLAAILAAAALLAGCGLPQTPYNGQQACDAVGGIYTADGRC
Ga0137392_105384143	3300011269	Vadose Zone Soil	MRVFLGAVLVAAILLGGCAGWSQTPYNPQQFCDSVGGTLTSDGRCLAGNN*
Ga0137391_101905012	3300011270	Vadose Zone Soil	MRILLGAVLMVVMLMAGCAGWSQTPFNARQSCDAVGGWYTSDGRCRAGN*
Ga0137393_100550185	3300011271	Vadose Zone Soil	MRILLGAVLMVVMLMAGCAGWSQTPFNARQSCDAVGGWYTSDGRCRAG
Ga0137389_100926072	3300012096	Vadose Zone Soil	MRILLGAVLMVVMLMAGCAGWSQTPFNARQSCDAVGGWYTPDGRCRAGN*
Ga0137389_110014782	3300012096	Vadose Zone Soil	MRIIVGAVIGLAMALGGCTGWSQTPFNGRQACDAVGGEYTSDGRCLAGNM*
Ga0137363_1000033712	3300012202	Vadose Zone Soil	MSLLVGVLLAAALLGGCAGWSQTPYNPEQACDGGVLTSDGRCLAGNI*
Ga0137374_100578242	3300012204	Vadose Zone Soil	LLAGVLLVAALLGGCAGWSQTPYNPQQACDAVAGTLTRDGRCLAGNM*
Ga0137380_101833413	3300012206	Vadose Zone Soil	MRMILLAAMLAAAALCGGCAGWSQTPYNPQQACDIVGGTLTADGRCLAGN*
Ga0137381_100304943	3300012207	Vadose Zone Soil	MPLLAGVLLLVVAGLLGGCAGWSQTPYNPQQACDIVGGTLTRDGRCLAGNS*
Ga0137379_100645095	3300012209	Vadose Zone Soil	MPLLAGVLLVVAGLLGGCAGWSQTPYNPQQACDIVGGTLTRDGRCLAGNS*
Ga0137379_108431461	3300012209	Vadose Zone Soil	MRVFLGAVLVVAVLLGGCAGWSQTPYNPQQACDIVGGTLTADGRCLAGN*
Ga0137387_102672002	3300012349	Vadose Zone Soil	MPLLAGVLLVVAWLLGGCAGWSQTPYNPQQACDIVGGTLTRDGRCLAGNS*
Ga0137372_101642382	3300012350	Vadose Zone Soil	MPLLAGVLLVAALLGGCAGWSQTPYNPQQACDIVGGTLTRDGRCLAGNS*
Ga0137372_102348082	3300012350	Vadose Zone Soil	MRVLLGAVLAAAALLAGCAGWSQTPYNGRQACESVGGIYTADERCLAGNI*
Ga0137385_100338894	3300012359	Vadose Zone Soil	MVEVTDMRILLGAVLVVAMLMSGCAGWSQTPFSERQSCDAVGGRFTSDGRCLAGSQ*
Ga0137385_102176541	3300012359	Vadose Zone Soil	LLVVAGLLGGCAGWSQTPYNPQQACDIVGGTLTRDGRCLAGNS*
Ga0137361_110490992	3300012362	Vadose Zone Soil	VGVFLGAVLVAAAWLGGRAGWLDTPYNPQQACDSVGGTLLSDGRCLGGGM*
Ga0137390_100024146	3300012363	Vadose Zone Soil	MRVILGAVLVVAILLGGCAGWSQTPYNPQQFCDSVGGTLTSDGRCLAGNN*
Ga0137373_105769552	3300012532	Vadose Zone Soil	MPLLAGVLLVAGLLGGCAGWSQTPYNPQQACDIVGGTLTSDGRCLAGNS*
Ga0137373_112100112	3300012532	Vadose Zone Soil	MRVLLGAVLAAAALLAGCAGWSQTPYNGRQACESVGGIYTADERCLAG
Ga0137358_110407322	3300012582	Vadose Zone Soil	MRLVAGLSFVAALLGGCAGWSQTPYNPQQACDIVGGTLTGDGRCLAGNM*
Ga0137397_1000165419	3300012685	Vadose Zone Soil	MRILLGAVLMVAMLMSGCAGWSQTPFNERQSCDAVGGWLTSDGRCLTGSQ*
Ga0137416_104441132	3300012927	Vadose Zone Soil	MRILLGAVLVVAMLMSGCAGWSQTPFNERQSCDAVGGWLTSDGRCLTGSQ*
Ga0137404_100096496	3300012929	Vadose Zone Soil	MPLLAGVLLVAALLGGCAGWSQTPYNPQQACDIVGGVLTSDGRCLAGNL*
Ga0137404_103607671	3300012929	Vadose Zone Soil	MRIIVGAVIGLAMLLGGCAGWSQTPFNGRQACDAVGGEYTSD
Ga0075302_10129801	3300014269	Natural And Restored Wetlands	MGWLAVLLLAAALLGGCAGWSQTPYNPQQACDSVGGFLTADGRCLA
Ga0075302_11385861	3300014269	Natural And Restored Wetlands	GVLLILALPLAGCAGWSQTPYNPQLACDSVGGTLTSDGRCLAGN*
Ga0137418_108156101	3300015241	Vadose Zone Soil	ILLGAVLVVAMLMSGCAGWSQTPFSERQSCDAVGGWLTSDGRCRAGN*
Ga0134089_100962783	3300015358	Grasslands Soil	MRGLAGLLLVATLLGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNL*
Ga0184632_103615383	3300018075	Groundwater Sediment	MRVLLGAVLIAAVLLGGCAGWSQTPYNPQQFCDSVGGTLTSDGRC
Ga0184633_100221703	3300018077	Groundwater Sediment	MRLLLGVALTAATLLGGCAGWSQTPYNPQQACDIVGGFLTADGRCKAGN
Ga0066655_105473052	3300018431	Grasslands Soil	MRWLAGLLLVAALLGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNL
Ga0066667_110166471	3300018433	Grasslands Soil	VGVFLGAVLVAAALLGGCAGWLDTPYNPQQACDSVGGTLLSDGRCLGGGM
Ga0066669_102476033	3300018482	Grasslands Soil	RVFLGAVLVVAILLGGCAGWSQTPYNPQQFCDSVGGTLTSDGRCLAGNN
Ga0187892_1000036218	3300019458	Bio-Ooze	MRALLGVVLLVAAFAGGCADLSQTPYNGRLACESVGGRYTADGRCLAGNS
Ga0187893_100599292	3300019487	Microbial Mat On Rocks	MSATRVLLGVVLLVAAFAGGCAELSQTPYNGRLACESVGGRYTADGRCLAGNS
Ga0187893_101098363	3300019487	Microbial Mat On Rocks	MRVLLGVGLLVAAIAGGCADLSQTPYNGRLACESVGGRYTADGRCLAGNS
Ga0179594_101559492	3300020170	Vadose Zone Soil	MPLLAGVLLVAALLGGCAGWSQTPYNPQQACDIVGGVLTSDGRCLAGNL
Ga0210382_105100171	3300021080	Groundwater Sediment	MRFVAGVLLVAAALLGGCAGWSQTPYNPQQACDAVGGRLTSDLRCLAGNS
Ga0126371_102186003	3300021560	Tropical Forest Soil	MRWLAGLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM
Ga0126371_112445892	3300021560	Tropical Forest Soil	MRWLAGVLLFAVALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM
Ga0210094_10201662	3300025549	Natural And Restored Wetlands	MGWLAVLLLAAALLGGCAGWSQTPYNPQQACDSVGGFLTADGRCLAGN
Ga0210073_10042553	3300025569	Natural And Restored Wetlands	MGWLAVLLLAAALLGGCAGWSQTPYNPQQACDSVGGFLTADGRCLAATRCRGGA
Ga0207684_100297585	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRIIVGAVIGLTMLLGGCAGWSQTPFNGRQACDAVGGEYTSDGRCLAGNL
Ga0207684_105229052	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRVFLGAVLVVAVLLGGCAGWSQTPYNPQQFCDSVGGTLTSDGRCLAGNN
Ga0207684_107000893	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLAGLLLVAALLGGCAGWSQTPFNPKQACDAVGGMLTADGRCLGGNL
Ga0207646_100182191	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRPRLGVVLVAAILLGGCAGWSQTPFNGRQACDAVAGEYTSDGRCLAGNQ
Ga0207648_107301073	3300026089	Miscanthus Rhizosphere	MRLLAGLLLVAALLTGCAGWSQTPYNPQQACDIVGGVLTRDGRCL
Ga0209801_12723521	3300026326	Soil	MRILLGAVLVVAMLMSGCAGWSQTPFSERQSCDAVGGWLTSDGRCLAGR
Ga0209803_11995112	3300026332	Soil	MPRVPMVEGTDMRILLGAVLVVAMLMSGCAGWSQTPFSERQSCDAVGGWLTSDGRCLAGS
Ga0209377_12132961	3300026334	Soil	MRILLGAVLVVAMLMSGCAGWSQTPFSERQSCDAV
Ga0257170_10414421	3300026351	Soil	WVFLGAVLVVAILLGGCAGWSQTPYNPQQFCDSVGGTLTSDGRCLAGNN
Ga0257171_11039362	3300026377	Soil	MPLLAGVLLVAALLGGCAGWSQTPYNPQQACDIVGGVLTSDGRCLAGNM
Ga0257164_10746592	3300026497	Soil	SASRALFPMRVFLGAVLVVAILLGGCAGWSQTPYNPQQFCDSVGGTLTSDGRCLAGNN
Ga0257164_10902541	3300026497	Soil	MVEVTNMRILLGGVLVVAMLMSGCAGWSQTPFNERQSCDAVGGWLTSDGRCLAGSQ
Ga0209180_100314834	3300027846	Vadose Zone Soil	MRIIVGAVIGLAMALGGCAGWSQTPFNGRQACDAVGGEYTSDGRCLAGNM
Ga0209180_107500431	3300027846	Vadose Zone Soil	MRMSLLAAMLAAAALCGGCAGWSQTPYNPQQACDIVGGTLTADGRCLAGN
Ga0209180_107860462	3300027846	Vadose Zone Soil	MRILLGAVLMVVMLMAGCAGWSQTPFNARQSCDAVGGWYTSDGRCRAGN
Ga0209465_100099113	3300027874	Tropical Forest Soil	MRWLVGVLLFAVALAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNM
Ga0209283_100989221	3300027875	Vadose Zone Soil	MRIIVGAVIGLAMALGGCAGWSQTPFNGRQACDAVGGEYTSD
Ga0209526_101975441	3300028047	Forest Soil	MRIMVGAVIGLAMLLGGCAGWSQTPFNGQQACDAVGGEYTSDGRCLAGNV
Ga0170824_1110742931	3300031231	Forest Soil	LLAGLLLVAALLGGCAGWSQTPYNPQQACDIVGGVLTRDGR
Ga0170819_160951551	3300031469	Forest Soil	MRLLAGLFLVAALLGGCAGWSQTPYNPQQACDIVGGVLTRDGRCLAGNL
Ga0318571_100131791	3300031549	Soil	PVVAPRRRMRMRWLAGLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM
Ga0318542_100991293	3300031668	Soil	WLAGLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM
Ga0318572_100449023	3300031681	Soil	MRMRWLAGLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM
Ga0318501_100007751	3300031736	Soil	AGLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM
Ga0307468_1006018491	3300031740	Hardwood Forest Soil	MKTLLAALLIAALLLGGCAGWSQTPYNPQQACDIVGGTLTYDGRC
Ga0307468_1010886951	3300031740	Hardwood Forest Soil	MRVLLGAVLIAAVLLGGCAGWSQTPYNPQQFCDSVGGTLTSDGRCLAG
Ga0307468_1020227841	3300031740	Hardwood Forest Soil	MKTLLAALLVAVVLLGGCAGWSQTPYNPQQACDIVGGTLTYDGRCLAGN
Ga0307468_1020786302	3300031740	Hardwood Forest Soil	LLVAALLGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNL
Ga0318521_101926673	3300031770	Soil	RPVVAPRRRMRMRWLAGLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGN
Ga0318576_103881141	3300031796	Soil	RRRMRMRWLAGLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM
Ga0318520_105836291	3300031897	Soil	MRWLAGVLLVGVALAGGCAGWSQTPYNPRQACDIVGGVLTADGRCLAGNM
Ga0310909_102970861	3300031947	Soil	RWLAGLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM
Ga0326597_102196371	3300031965	Soil	MGFVAGVLLAAAALLGGCAGWSQTPYNPQQACDIVGGSLTADGRCLAGNS
Ga0318553_100931663	3300032068	Soil	RMRMRWLAGLVLLAAALAGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM
Ga0335085_100427683	3300032770	Soil	MRWLGALLVAATLCGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM
Ga0335082_116638032	3300032782	Soil	MRVLLGMVLLAAALTAGCAGIPSTPYNGQQACDIVGGRYTADGRCLAGNS
Ga0335070_1000035525	3300032829	Soil	MRWLAGLLAASALLGGCAGWSQTPYNPQQACDIVGGSLTADGRCLAGN
Ga0335070_100092103	3300032829	Soil	MRWLGALLMAATLCGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNL
Ga0335083_102090973	3300032954	Soil	MRWLGALLMAATLCGGCAGWSQTPYNPQQACDIVGGVLTADGRCLAGNM
Ga0335084_104364242	3300033004	Soil	RHRPMRLVAGALLAAAVLLAGCAGWSQTPYNPQQACDIVGGRLAADGRCLAGN
Ga0334722_109735812	3300033233	Sediment	MRLVAGLLLTAAAVLGGCAGWSQTPYNPQQACDIVGGRLTSDGRCLAGNL
Ga0326729_10088823	3300033432	Peat Soil	MRWLAGLLAASALLGGCAGWSQTPYNPQQACDIVGGFLTADGRCLAGN
Ga0314864_0168721_414_563	3300033805	Peatland	RLFLAALLAAAALAGGCAGMPQTPYDGSLSCTSIGGIYTADGRCLAGNV
Ga0314866_063403_493_621	3300033807	Peatland	MRWLAVILVAAALCCGGCAGWSQTPYNPQQACDIVGGVLTADG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F035898

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences