Metagenome / Metatranscriptome Family F036191

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036191
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	50 residues
Representative Sequence	VLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLEAPHA
Number of Associated Samples	111
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.18 %
% of genes near scaffold ends (potentially truncated)	98.24 %
% of genes from short scaffolds (< 2000 bps)	85.29 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.235 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (40.588 % of family members)
Environment Ontology (ENVO)	Unclassified (75.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (78.824 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.33% β-sheet: 0.00% Coil/Unstructured: 82.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF03932	CutC	11.18
PF01625	PMSR	6.47
PF01713	Smr	5.29
PF01641	SelR	4.12
PF00082	Peptidase_S8	3.53
PF00072	Response_reg	2.94
PF07617	DUF1579	2.94
PF12710	HAD	2.94
PF00990	GGDEF	2.35
PF12158	DUF3592	1.76
PF13646	HEAT_2	1.76
PF02633	Creatininase	1.76
PF08450	SGL	1.76
PF00271	Helicase_C	1.18
PF00176	SNF2-rel_dom	1.18
PF13419	HAD_2	1.18
PF08281	Sigma70_r4_2	0.59
PF12771	SusD-like_2	0.59
PF00005	ABC_tran	0.59
PF00248	Aldo_ket_red	0.59
PF13715	CarbopepD_reg_2	0.59
PF01799	Fer2_2	0.59
PF13557	Phenol_MetA_deg	0.59

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG3142	Copper homeostasis protein CutC	Inorganic ion transport and metabolism [P]	11.18
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	6.47
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	4.12
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	1.76
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	1.76
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	1.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.24 %
Unclassified	root	N/A	1.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.24 %
Unclassified	root	N/A	1.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.24 %
Unclassified	root	N/A	1.76 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	20.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.76 %
Unclassified	root	N/A	1.76 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.18 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	16.47 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.76 %
Unclassified	root	N/A	1.76 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	1.18 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.59 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.59 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.59 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	11.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.76 %
Unclassified	root	N/A	1.76 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples	1.18 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.59 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.59 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.59 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	11.76 %
Unclassified	root	N/A	1.76 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	1.18 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.59 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.59 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.59 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.59 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	11.76 %
Unclassified	root	N/A	1.76 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	1.18 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.59 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.59 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.59 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.59 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	11.76 %
Unclassified	root	N/A	1.76 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	1.18 %
Opitutus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus	0.59 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.59 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.59 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.59 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	11.76 %
Unclassified	root	N/A	1.76 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	1.18 %
Opitutus terrae	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	0.59 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.59 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.59 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1044255	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300002560\|JGI25383J37093_10216636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	502	Open in IMG/M
3300002562\|JGI25382J37095_10050929	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300002562\|JGI25382J37095_10077806	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300002908\|JGI25382J43887_10136324	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300002908\|JGI25382J43887_10254811	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300002909\|JGI25388J43891_1004398	All Organisms → cellular organisms → Bacteria	2857	Open in IMG/M
3300002911\|JGI25390J43892_10121477	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005166\|Ga0066674_10271073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	801	Open in IMG/M
3300005166\|Ga0066674_10281301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	783	Open in IMG/M
3300005172\|Ga0066683_10339821	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300005172\|Ga0066683_10675208	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005172\|Ga0066683_10862716	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005174\|Ga0066680_10007423	All Organisms → cellular organisms → Bacteria → Proteobacteria	5427	Open in IMG/M
3300005176\|Ga0066679_10060335	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300005176\|Ga0066679_10547986	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300005177\|Ga0066690_10004508	All Organisms → cellular organisms → Bacteria → Proteobacteria	6307	Open in IMG/M
3300005178\|Ga0066688_10440095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300005178\|Ga0066688_10794617	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005180\|Ga0066685_10298697	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300005436\|Ga0070713_101338808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	694	Open in IMG/M
3300005446\|Ga0066686_10280611	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300005446\|Ga0066686_10974042	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300005450\|Ga0066682_10913374	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005451\|Ga0066681_10650249	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300005471\|Ga0070698_100876251	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	843	Open in IMG/M
3300005540\|Ga0066697_10202310	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300005545\|Ga0070695_100193374	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300005546\|Ga0070696_100476024	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300005552\|Ga0066701_10024987	All Organisms → cellular organisms → Bacteria	3031	Open in IMG/M
3300005552\|Ga0066701_10487352	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005553\|Ga0066695_10902367	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005554\|Ga0066661_10288008	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300005556\|Ga0066707_10805351	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005558\|Ga0066698_11050900	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005559\|Ga0066700_10654871	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005568\|Ga0066703_10665271	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005574\|Ga0066694_10147347	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300005574\|Ga0066694_10603482	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005586\|Ga0066691_10680618	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005587\|Ga0066654_10130850	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300006031\|Ga0066651_10055211	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300006031\|Ga0066651_10715597	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006034\|Ga0066656_10052118	All Organisms → cellular organisms → Bacteria	2364	Open in IMG/M
3300006034\|Ga0066656_10617720	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300006046\|Ga0066652_102023408	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006755\|Ga0079222_10371335	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300006755\|Ga0079222_11645240	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300006791\|Ga0066653_10034381	All Organisms → cellular organisms → Bacteria	2022	Open in IMG/M
3300006791\|Ga0066653_10101243	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1314	Open in IMG/M
3300006791\|Ga0066653_10218920	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300006791\|Ga0066653_10303453	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300006796\|Ga0066665_10988436	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300006796\|Ga0066665_11634904	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300006797\|Ga0066659_10021119	All Organisms → cellular organisms → Bacteria	3728	Open in IMG/M
3300006797\|Ga0066659_10099454	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300006797\|Ga0066659_10426315	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300006854\|Ga0075425_102442098	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300009012\|Ga0066710_100025741	All Organisms → cellular organisms → Bacteria	6692	Open in IMG/M
3300009012\|Ga0066710_103062552	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	648	Open in IMG/M
3300009090\|Ga0099827_11146279	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300009137\|Ga0066709_100024715	All Organisms → cellular organisms → Bacteria	6177	Open in IMG/M
3300009137\|Ga0066709_101174045	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300009137\|Ga0066709_102299121	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300009137\|Ga0066709_104246387	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300010301\|Ga0134070_10010317	All Organisms → cellular organisms → Bacteria	2939	Open in IMG/M
3300010301\|Ga0134070_10213050	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300010301\|Ga0134070_10473571	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300010304\|Ga0134088_10280376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	804	Open in IMG/M
3300010321\|Ga0134067_10020578	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300010322\|Ga0134084_10173393	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	739	Open in IMG/M
3300010322\|Ga0134084_10350698	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300010322\|Ga0134084_10454415	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300010323\|Ga0134086_10015067	All Organisms → cellular organisms → Bacteria	2422	Open in IMG/M
3300010323\|Ga0134086_10321884	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300010329\|Ga0134111_10140056	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300010329\|Ga0134111_10575568	Not Available	502	Open in IMG/M
3300010333\|Ga0134080_10025310	All Organisms → cellular organisms → Bacteria	2228	Open in IMG/M
3300010333\|Ga0134080_10067330	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1432	Open in IMG/M
3300010333\|Ga0134080_10230944	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300010336\|Ga0134071_10035589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2199	Open in IMG/M
3300012096\|Ga0137389_10486548	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1058	Open in IMG/M
3300012198\|Ga0137364_10161850	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300012198\|Ga0137364_10374277	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300012198\|Ga0137364_10724327	All Organisms → cellular organisms → Bacteria → FCB group	751	Open in IMG/M
3300012198\|Ga0137364_10929458	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300012198\|Ga0137364_11315094	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300012199\|Ga0137383_10203671	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300012199\|Ga0137383_10405106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	999	Open in IMG/M
3300012206\|Ga0137380_11345606	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012207\|Ga0137381_11166462	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300012209\|Ga0137379_10613018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	995	Open in IMG/M
3300012209\|Ga0137379_11238650	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300012349\|Ga0137387_10105451	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1969	Open in IMG/M
3300012351\|Ga0137386_10948925	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300012357\|Ga0137384_10134024	All Organisms → cellular organisms → Bacteria	2074	Open in IMG/M
3300012359\|Ga0137385_10619034	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300012361\|Ga0137360_10166043	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1764	Open in IMG/M
3300012362\|Ga0137361_11497890	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	597	Open in IMG/M
3300012396\|Ga0134057_1344907	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	868	Open in IMG/M
3300012685\|Ga0137397_10591741	Not Available	825	Open in IMG/M
3300012917\|Ga0137395_10821992	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300012918\|Ga0137396_11176415	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	542	Open in IMG/M
3300012927\|Ga0137416_10692029	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300012972\|Ga0134077_10129788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	994	Open in IMG/M
3300012976\|Ga0134076_10021106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2311	Open in IMG/M
3300014154\|Ga0134075_10034264	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300014157\|Ga0134078_10432823	All Organisms → cellular organisms → Bacteria → FCB group	597	Open in IMG/M
3300015053\|Ga0137405_1367086	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300015356\|Ga0134073_10408553	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	514	Open in IMG/M
3300015359\|Ga0134085_10109730	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300017654\|Ga0134069_1002431	All Organisms → cellular organisms → Bacteria	5056	Open in IMG/M
3300017654\|Ga0134069_1115936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	880	Open in IMG/M
3300017656\|Ga0134112_10173477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	836	Open in IMG/M
3300017656\|Ga0134112_10190138	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300017657\|Ga0134074_1224357	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300017659\|Ga0134083_10073464	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300017659\|Ga0134083_10176895	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300018431\|Ga0066655_10831620	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300018431\|Ga0066655_11430690	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300018433\|Ga0066667_10183129	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300018433\|Ga0066667_10904956	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300018433\|Ga0066667_11949519	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300018433\|Ga0066667_12292769	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300018468\|Ga0066662_10225544	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1507	Open in IMG/M
3300018468\|Ga0066662_11131059	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300018468\|Ga0066662_11274826	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300018468\|Ga0066662_11705518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300018482\|Ga0066669_12456799	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300019789\|Ga0137408_1191964	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300025928\|Ga0207700_10504150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	1071	Open in IMG/M
3300025939\|Ga0207665_10012154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5653	Open in IMG/M
3300026298\|Ga0209236_1200563	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300026298\|Ga0209236_1208925	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300026298\|Ga0209236_1301327	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300026300\|Ga0209027_1311724	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300026305\|Ga0209688_1023661	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300026307\|Ga0209469_1054898	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300026307\|Ga0209469_1075640	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300026309\|Ga0209055_1117065	All Organisms → cellular organisms → Bacteria → FCB group	1022	Open in IMG/M
3300026315\|Ga0209686_1075826	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300026317\|Ga0209154_1308554	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300026324\|Ga0209470_1006083	All Organisms → cellular organisms → Bacteria → Proteobacteria	7787	Open in IMG/M
3300026324\|Ga0209470_1043615	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300026324\|Ga0209470_1143621	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300026324\|Ga0209470_1150720	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300026325\|Ga0209152_10230232	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300026325\|Ga0209152_10284154	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	617	Open in IMG/M
3300026325\|Ga0209152_10498260	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	502	Open in IMG/M
3300026327\|Ga0209266_1009949	All Organisms → cellular organisms → Bacteria	5533	Open in IMG/M
3300026328\|Ga0209802_1048781	All Organisms → cellular organisms → Bacteria	2107	Open in IMG/M
3300026331\|Ga0209267_1064789	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300026333\|Ga0209158_1029317	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300026334\|Ga0209377_1270008	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300026507\|Ga0257165_1074372	All Organisms → cellular organisms → Bacteria → FCB group	623	Open in IMG/M
3300026528\|Ga0209378_1089976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1370	Open in IMG/M
3300026528\|Ga0209378_1243920	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	571	Open in IMG/M
3300026536\|Ga0209058_1106886	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300026537\|Ga0209157_1261603	Not Available	665	Open in IMG/M
3300026540\|Ga0209376_1133530	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300026540\|Ga0209376_1142467	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300026540\|Ga0209376_1183835	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	968	Open in IMG/M
3300026547\|Ga0209156_10060464	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300027748\|Ga0209689_1304346	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300027787\|Ga0209074_10019694	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300027787\|Ga0209074_10050135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1274	Open in IMG/M
3300027882\|Ga0209590_10826379	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300027903\|Ga0209488_10322860	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1151	Open in IMG/M
3300031820\|Ga0307473_11535541	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300032180\|Ga0307471_100157447	All Organisms → cellular organisms → Bacteria	2198	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.41%
Host-Associated	Host-Associated	0.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.41%
Plants	Host-Associated → Plants	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.29%
Loam	Environmental → Terrestrial → Soil → Loam	4.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	57.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	40.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	17.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	17.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10442551	3300002557	Grasslands Soil	GFPAPNFRKTVGQDPNVAFVTKPWTASELLAQVRVLLEATHP*
JGI25383J37093_102166361	3300002560	Grasslands Soil	SGFDMYEVIRAESRGVRVLFMSGFPAPNFRKTVGQDPGVAFVTKPWTASEMLAQVRRLLEPSQA*
JGI25382J37095_100509291	3300002562	Grasslands Soil	VIRGESRGLSVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQIRLLLEAGS*
JGI25382J37095_100778063	3300002562	Grasslands Soil	VLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQVRLMIDAARA*
JGI25382J43887_101363243	3300002908	Grasslands Soil	LFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQVRLMIDAARA*
JGI25382J43887_102548111	3300002908	Grasslands Soil	RAESRGLRVLFMSGFPAPNFRKTVGDDPGVAFVTKPWTASELLAQVRRLLELPRA*
JGI25388J43891_10043984	3300002909	Grasslands Soil	RGESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLEAPQA*
JGI25390J43892_101214771	3300002911	Grasslands Soil	SGFPAPNFRKTVGQDPNVAFVTKPWTASELLAQVRVLLEATHP*
Ga0066674_102710731	3300005166	Soil	FMSGFPAPNFRKTVGRDPAVAFVTKPWAASELLERIRLLLESTQT*
Ga0066674_102813011	3300005166	Soil	GFPAPNYRKTVGLDAAVAFVTKPWTASELLGRVRTLLQPAPA*
Ga0066683_103398211	3300005172	Soil	VIRGESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEAPHG*
Ga0066683_106752082	3300005172	Soil	VLFMSGFPAPNFRKTVGHDPRVAFVTKPWTASELLAQVRRLLELAQP*
Ga0066683_108627161	3300005172	Soil	LFMSGFPAPNFRKTVGQDPNVAFVTKPWTASELLAQVRVLLEATHP*
Ga0066680_100074236	3300005174	Soil	GVRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLETSPA*
Ga0066679_100603353	3300005176	Soil	SATIKVLFMSGFPAPNYRKTVGLDAAVAFVTKPWTASELLARVRQLLESSPR*
Ga0066679_105479862	3300005176	Soil	SGFDMYEVIRGESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEAPHG*
Ga0066690_100045081	3300005177	Soil	SATIKVLFMSGFPAPNYRKTVGLDAAVAFVTKPWTASELLGRVRLLLESSPR*
Ga0066688_104400952	3300005178	Soil	SGFDLYQAIRGESRGVRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRVLLEAPPT*
Ga0066688_107946172	3300005178	Soil	SGFDMYEVIRGESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLEAPQA*
Ga0066685_102986972	3300005180	Soil	RVLFMSGFPAPNFRKTVGRDPGVAFVTKPWTASEMLAQVRGLLEAAH*
Ga0070713_1013388082	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRVLLETSPA*
Ga0066686_102806111	3300005446	Soil	VRMLFMSGFPAPNFRKTVGRDPAVAFVTKPWAASELLERIRLLLESTQT*
Ga0066686_109740422	3300005446	Soil	RGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLEALQA*
Ga0066682_109133742	3300005450	Soil	GESRGARVLFMSGFPAPNFRKTVGQDPNVAFVTKPWTASELLAQVRVLLEATHA*
Ga0066681_106502491	3300005451	Soil	GFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEAPHG*
Ga0070698_1008762511	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	KLSGFELYEAIRGEARGLGVLFMSGFPAPNFRKTVGHDPHVAFVTKPWTASELLAQVRALLQPA*
Ga0066697_102023103	3300005540	Soil	RGESRGVRVLFMSGFPAPNFRKTVGQDPGVAFVTKPWTASELLAQVRRLLELPQA*
Ga0070695_1001933743	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LFMSGFPAPNFRKTVGQDPHVAFVTKPWTASELLAQVRVLLEAPHG*
Ga0070696_1004760241	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SRGLSVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQVRVLIEA*
Ga0066701_100249871	3300005552	Soil	ESRGVRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRQLLEAPHA*
Ga0066701_104873521	3300005552	Soil	FMSGFPAPNFRKTVGQDPGVAFVTKPWTASEMLAQVRRLLEPSQA*
Ga0066695_109023672	3300005553	Soil	ESRGARVLFMSGFPAPNFRKTVGQDPNVAFVTKPWTASELLAQVRVLLEATHA*
Ga0066661_102880082	3300005554	Soil	PNFRKTVGQDPGVAFVTKPWTASEMLAQVRRLLEPSQA*
Ga0066707_108053511	3300005556	Soil	FPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEARQP*
Ga0066698_110509001	3300005558	Soil	SVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQIRVLLEAGGGRA*
Ga0066700_106548711	3300005559	Soil	LSGFDMYEVIRGESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEAPHG*
Ga0066703_106652712	3300005568	Soil	LYEAIRRDSAAMKVLFTSGFPAPNYRKSVGLDAHVAFVTKPWTASELLDRVRSLLESSPK
Ga0066694_101473473	3300005574	Soil	VLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEAPHG*
Ga0066694_106034821	3300005574	Soil	RVLFMSGFPAPNFRKTVGQDPNVAFVTKPWTASELLAQVRVLLEATHP*
Ga0066691_106806182	3300005586	Soil	PNFRKTVGQDPRVAFVTKPWTASELLAQVRMLLEVSPV*
Ga0066654_101308503	3300005587	Soil	SRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLEAPQA*
Ga0066651_100552113	3300006031	Soil	SGFDLYQAIRGESRGVRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLEAPHA*
Ga0066651_107155972	3300006031	Soil	EVIRGESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLEAPQA*
Ga0066656_100521182	3300006034	Soil	RKTVGRDPGVAFVTKPWTASEMLAQVRGLLEAAH*
Ga0066656_106177201	3300006034	Soil	KTVGQDSHVAFVTKPWTASELLAQVRVLLEARQP*
Ga0066652_1020234081	3300006046	Soil	VRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLEAPQA*
Ga0079222_103713351	3300006755	Agricultural Soil	APNFRKTVGQDPHVAFVTKPWTASELLAQVRVLLEAPRG*
Ga0079222_116452402	3300006755	Agricultural Soil	RKTVGQDPGVAFVTKPWTASELLAQVRRLLEASERARE*
Ga0066653_100343813	3300006791	Soil	SRGVRVLFMSGFPAPNFRKTVGEDPGVAFVTKPWTASELLAQVRRLLELPRA*
Ga0066653_101012431	3300006791	Soil	PNYRKTVGLDAAVAFVTKPWTASELLGRVRTLLQPAPA*
Ga0066653_102189202	3300006791	Soil	IRGESRGVRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLEAPHA*
Ga0066653_103034532	3300006791	Soil	EVIRGESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEDRQP*
Ga0066665_109884362	3300006796	Soil	SRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEARQP*
Ga0066665_116349041	3300006796	Soil	LSGFDMYETIRGESRDVRVLFMSGFPAPNFRKTVGRDPGVAFVTKPWTASEMLAQVRGLLEAAH*
Ga0066659_100211191	3300006797	Soil	RKTVGQDPGVAFVTKPWTASELLAQVRRLLELPQA*
Ga0066659_100994541	3300006797	Soil	MYEVIRAESRGVRVLFMSGFPAPNFRKTVGQDPGVAFVTKPWTASEMLAQVRRLLEPSQA
Ga0066659_104263151	3300006797	Soil	LYESIRRESATIKVLFMSGFPAPNYRKTVGLDAAVAFVTKPWTASELLGRVRLLLESSPR
Ga0075425_1024420981	3300006854	Populus Rhizosphere	MSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQVRVLIEARHA*
Ga0066710_1000257416	3300009012	Grasslands Soil	QLSGFELYEVIRGESRGLSVLFMSGFPAPNFRKTVGQDSRVAFVTKPWTASELLAQVRLLVEVGAGPA
Ga0066710_1030625522	3300009012	Grasslands Soil	VRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRVLLETPPG
Ga0099827_111462791	3300009090	Vadose Zone Soil	IRRDSSGVKVLFTSGFPAPNFRKSVGLDPAVAFVTKPWTASELLGRVRTMLQSPRA*
Ga0066709_1000247151	3300009137	Grasslands Soil	QLSGFELYEVIRGESRGLSVLFMSGFPAPNFRKTVGQDSRVAFVTKPWTASELLAQVRLLVEVGAGPA*
Ga0066709_1011740453	3300009137	Grasslands Soil	VLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLEAPHA*
Ga0066709_1022991212	3300009137	Grasslands Soil	EVIRGESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEAPHG*
Ga0066709_1042463872	3300009137	Grasslands Soil	SRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLQAPQA*
Ga0134070_100103173	3300010301	Grasslands Soil	DMYETIRGESRDVRVLFMSGFPAPNFRKTVGRDPGVAFVTKPWTASEMLAQVRGLLEAAH
Ga0134070_102130502	3300010301	Grasslands Soil	FELYEVIRGESRGVPLLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRQLVEAPQA*
Ga0134070_104735711	3300010301	Grasslands Soil	EVIRGESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEARQP*
Ga0134088_102803762	3300010304	Grasslands Soil	SGFPAPNFRKTVGRDPAVAFVTKPWAASELLERIRLLLESTQT*
Ga0134067_100205783	3300010321	Grasslands Soil	FDLYQAIRGESRGVRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRVLLELSPS*
Ga0134084_101733933	3300010322	Grasslands Soil	SGFPAPNFRKTVGQDPGVAFVTKPWTASELLAQVRQLLELAQP*
Ga0134084_103506981	3300010322	Grasslands Soil	PNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLEAPQA*
Ga0134084_104544151	3300010322	Grasslands Soil	SGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEDRQP*
Ga0134086_100150674	3300010323	Grasslands Soil	PAPNFRKTVGQDPGVAFVTKPWTASEMLAQVRLLLERSQA*
Ga0134086_103218842	3300010323	Grasslands Soil	FPAPNFRKTVGQDPAVAFVTKPWTASELLAQIRVLLEAGGGRA*
Ga0134111_101400561	3300010329	Grasslands Soil	VLFMSGFPAPNFRKTVGQDPNVAFVTKPWTASELLAQVRVLLEATHA*
Ga0134111_105755682	3300010329	Grasslands Soil	GESRGLSVLFMSGFPAPNFRKTVGQDPGVAFVTKPWTASELLAQIRRLLEAGS*
Ga0134080_100253103	3300010333	Grasslands Soil	AAMKVLFTSGFPAPNYRKSVGLDAHVAFVTKPWTASELLDRVRSLLQSSPK*
Ga0134080_100673303	3300010333	Grasslands Soil	FTSGFPAPNYRKTVGLDAAVAFVTKPWTASELLGRVRTLLQPAPA*
Ga0134080_102309442	3300010333	Grasslands Soil	PAPNFRKTVGQDPAVAFVTKPWTASELLAQIRVLLEAGGGRA*
Ga0134071_100355891	3300010336	Grasslands Soil	SGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQIRRLLEAGS*
Ga0137389_104865483	3300012096	Vadose Zone Soil	GESRGLSVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQVRLMIDAPRA*
Ga0137364_101618503	3300012198	Vadose Zone Soil	VLFTSGFPAPNYRKSVGLDAHVAFVTKPWTASELLDRVRSLLESSPK*
Ga0137364_103742772	3300012198	Vadose Zone Soil	AMKVLFTSGFPAPNYRKSVGLDAHVAFVTKPWTASELLDRVRSLLESSPR*
Ga0137364_107243271	3300012198	Vadose Zone Soil	SGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLEAPHA*
Ga0137364_109294582	3300012198	Vadose Zone Soil	MSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLEAPQA*
Ga0137364_113150941	3300012198	Vadose Zone Soil	GVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEAPHG*
Ga0137383_102036713	3300012199	Vadose Zone Soil	SVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRVLLETPPG*
Ga0137383_104051061	3300012199	Vadose Zone Soil	NFRKTVGQDPAVAFVTKPWTASELLAQIRRLLEAGS*
Ga0137380_113456062	3300012206	Vadose Zone Soil	SGFDMYEVIRGESRGVRVLFMSGFPAPNFRKTVGQDPSVAFVTKPWTASELLAQVRLLLQAPQA*
Ga0137381_111664621	3300012207	Vadose Zone Soil	FDMYEVIRGESRGVRVLFMSGFPAPNFRKTVGQDPSVAFVTKPWTASELLAQVRLLLQAPQA*
Ga0137379_106130183	3300012209	Vadose Zone Soil	GFPAPNFRKTVGQDPAVAFVTKPWTASELLAQIRRLLEAGS*
Ga0137379_112386502	3300012209	Vadose Zone Soil	FMSGFPAPNFRKTVGQDPSVAFVTKPWTASELLAQVRVLLEARQP*
Ga0137387_101054513	3300012349	Vadose Zone Soil	FPAPNFRKTVGRDPAVAFVTKPWAASELLERIRLLLESTQT*
Ga0137386_109489252	3300012351	Vadose Zone Soil	PAPNFRKTVGQDPGVAFVTKPWTASELLAQVRLLLQAPQA*
Ga0137384_101340244	3300012357	Vadose Zone Soil	APNFRKTVGQDPRVAFVTKPWTASELLAQVRQLVEAPQA*
Ga0137385_106190341	3300012359	Vadose Zone Soil	RGESRGVRVLFMSGFPAPNFRKTVGQDPHVAFVTKPWTASELLAQVRVLLEAPHG*
Ga0137360_101660431	3300012361	Vadose Zone Soil	EVIRGESRGLSVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQVRLMIDAPRA*
Ga0137361_114978901	3300012362	Vadose Zone Soil	PNFRKTVGQDPGVAFVTKPWTASELLAQVRQLLELAQP*
Ga0134057_13449072	3300012396	Grasslands Soil	RDVKVLFTSGFPAPNFRKSVGGDDGVAFVTKPWTANELLGCVRTLLRA*
Ga0137397_105917412	3300012685	Vadose Zone Soil	MRVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQVRLLIEARHA*
Ga0137395_108219922	3300012917	Vadose Zone Soil	FMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQVRLMIDAARA*
Ga0137396_111764152	3300012918	Vadose Zone Soil	GFPAPNFRKTVGQDPGVAFVTKPWTASELLAQVRQLLELAQP*
Ga0137416_106920291	3300012927	Vadose Zone Soil	IRGESRGVRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLEAGGPAP*
Ga0134077_101297883	3300012972	Grasslands Soil	GVRVLFMSGFPAPNFRKTVGQDPSVAFVTKPWTASELLAQVRRLLELPQA*
Ga0134076_100211064	3300012976	Grasslands Soil	APNFRKTVGQDAAVAFVTKPWTASELLAQIRRLLEAGS*
Ga0134075_100342643	3300014154	Grasslands Soil	YEVIRGESRGLSVLFMSGFPAPNFRKTVGQDPGVAFVTKPWTASELLAQIRRLLEAGS*
Ga0134078_104328232	3300014157	Grasslands Soil	PNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLEAPHA*
Ga0137405_13670863	3300015053	Vadose Zone Soil	MSGFPAPNFRKTVGQDPNVAFVTKPWTASELLAQVRVLLEATHP*
Ga0134073_104085531	3300015356	Grasslands Soil	RGLSVLFMSGFPAPNFRKTVGQDAAVAFVTKPWTASELLAQIRRLLEAGS*
Ga0134085_101097301	3300015359	Grasslands Soil	GLSVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQIRVLLEAGGGRA*
Ga0134069_10024316	3300017654	Grasslands Soil	ALKVLFTSGFPAPNYRKTVGLDAAVAFVTKPWTASELLGRVRTLLQPAPA
Ga0134069_11159362	3300017654	Grasslands Soil	TSGFPAPNYRKTVGLDAAVAFVTKPWTASELLGRVRTLLQPAPA
Ga0134112_101734771	3300017656	Grasslands Soil	EVIRGESRGVRVLFMSGFPAPNFRKTVGQDPGVAFVTKPWTASELLAQIRLLLEPSRA
Ga0134112_101901381	3300017656	Grasslands Soil	MYEVIRAESRGVRVLFMSGFPAPNFRKTVGEDPGVAFVTKPWTASELLAQVRRLLELPRA
Ga0134074_12243572	3300017657	Grasslands Soil	DLYQAIRGESRGVRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLEAPH
Ga0134083_100734643	3300017659	Grasslands Soil	VRVLFMSGFPAPNFRKTVGQDPGVAFVTKPWTASELLAQVRRLLELAQA
Ga0134083_101768952	3300017659	Grasslands Soil	EVIRGESRGLSVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQIRLLLEAGGGRA
Ga0066655_108316202	3300018431	Grasslands Soil	SRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEARQP
Ga0066655_114306902	3300018431	Grasslands Soil	VLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLEAPQA
Ga0066667_101831292	3300018433	Grasslands Soil	SGFDLYQAIRGESRGVRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRVLLEAPPT
Ga0066667_109049562	3300018433	Grasslands Soil	LSGFDMYEVIRGESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEAPHG
Ga0066667_119495191	3300018433	Grasslands Soil	SVLFMSGFPAPNFRKTVGQDSRVAFVTKPWTASELLAQVRLLVEVGAGPA
Ga0066667_122927691	3300018433	Grasslands Soil	MSGFPAPNFRKTVGQDARVAFVTKPWTASELLAQVRVLLELSPA
Ga0066662_102255444	3300018468	Grasslands Soil	FRKTVGQDPGVAFVTKPWTASELLAQMRRLLELPQA
Ga0066662_111310591	3300018468	Grasslands Soil	MSGFPAPNFRKTVGHDPRVAFVTKPWTASELLAQVRRLLELAQP
Ga0066662_112748261	3300018468	Grasslands Soil	SGFDMYEVIRAESRGVRVLFMSGFPAPNFRKTVGQDPGVAFVTKPWTASEMLAQVRLLLERSQA
Ga0066662_117055181	3300018468	Grasslands Soil	SGFELYEAIRGESRDVRMLFMSGFPAPNFRKTVGRDPAVAFVTKPWAASELLERIRLLLESTQT
Ga0066669_124567991	3300018482	Grasslands Soil	SGFPAPNYRKSVGLDAHVAFVTKPWTASELLDRVRSLVESSPR
Ga0137408_11919642	3300019789	Vadose Zone Soil	YEVIRGESRGLSVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQVRLMIDAARA
Ga0207700_105041501	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ESRGVRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRVLLETSPA
Ga0207665_100121543	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MFVEPNEAIRGEARGLGVLFMSGFPAPNFRKTVGRDPHVAFVTKPWTASELLAQVRAVLQVA
Ga0209236_12005632	3300026298	Grasslands Soil	YEVIRGESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLQAPQA
Ga0209236_12089251	3300026298	Grasslands Soil	EVIRGESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEAPHG
Ga0209236_13013271	3300026298	Grasslands Soil	LSGFELYEVIRGESRGLSVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQIRVLLEVAGETGGD
Ga0209027_13117241	3300026300	Grasslands Soil	RDSATIKVLFMSGFPAPNYRKTVGLDAAVAFVTKPWTASELLARVRQLLESSPR
Ga0209688_10236611	3300026305	Soil	NFRKTVGQDPRVAFVTKPWTASELLAQVRLLLEAPHA
Ga0209469_10548981	3300026307	Soil	SGFDMYEVIRGESRGVRVLFMSGFPAPNFRKTVGQDPGVAFVTKPWTASELLAQVRRLLELPQA
Ga0209469_10756401	3300026307	Soil	VRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEDRQP
Ga0209055_11170653	3300026309	Soil	VRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLEAPHA
Ga0209686_10758261	3300026315	Soil	GVRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRVLLEAPPT
Ga0209154_13085541	3300026317	Soil	LFMSGFPAPNFRKTVGQDPGVAFVTKPWTASEMLAQVRRLLEPSQA
Ga0209470_10060831	3300026324	Soil	QLYEAIRRDSPALKVLFTSGFPAPNYRKTVGLDAAVAFVTKPWTASELLGRVRTLLQPAP
Ga0209470_10436153	3300026324	Soil	RGVRVLFMSGFPAPNFRKTVGEDPGVAFVTKPWTASELLAQVRRLLELPRA
Ga0209470_11436213	3300026324	Soil	ESRGVRVLFMSGFSAPNFRKTVGQDPGVAFVTKPWTASELLAQVRRLIELPQA
Ga0209470_11507201	3300026324	Soil	GFELYEVIRGESRGLSVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQIRVLLEAGGGRA
Ga0209152_102302321	3300026325	Soil	GVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEAPHG
Ga0209152_102841543	3300026325	Soil	LFMSGFPAPNFRKTVGQDPGVAFVTKPWTASELLAQVRRLLELPQA
Ga0209152_104982601	3300026325	Soil	GFPAPNFRKTVGHDPRVAFVTKPWTASELLAQVRRLLELAQP
Ga0209266_10099495	3300026327	Soil	RDVRVLFMSGFPAPNFRKTVGRDPGVAFVTKPWTASEMLAQVRGLLEAAH
Ga0209802_10487813	3300026328	Soil	PAPNFRKTVGDDPGVAFVTKPWTASELLAQVRRLLELPRA
Ga0209267_10647893	3300026331	Soil	DLYQAIRGESRGVRVLFMSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLETSP
Ga0209158_10293174	3300026333	Soil	PNFRKTVGEDPGVAFVTKPWTASELLAQVRRLLELPQA
Ga0209377_12700082	3300026334	Soil	APNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEAPHG
Ga0257165_10743721	3300026507	Soil	MSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQVRLMIDAPRA
Ga0209378_10899761	3300026528	Soil	NFRKTVGQDPGVAFVTKPWTASELLAQIRRLLEAGS
Ga0209378_12439201	3300026528	Soil	VLFTSGFPAPNFRKTVGQDAGVAFVTKPWTASELLAQVRQLLELAQP
Ga0209058_11068863	3300026536	Soil	SVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQIRVLLEAGGGRA
Ga0209157_12616032	3300026537	Soil	FMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQIRRLLEAGS
Ga0209376_11335303	3300026540	Soil	ESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLEAPQA
Ga0209376_11424673	3300026540	Soil	ESRGVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRVLLEARQP
Ga0209376_11838352	3300026540	Soil	FPAPNFRKTVGRDPGVAFVTKPWTASEMLAQVRGLLEAAH
Ga0209156_100604644	3300026547	Soil	PAPNYRKTVGLDAAVAFVTKPWTASELLGRVRTLLQPAPA
Ga0209689_13043462	3300027748	Soil	GVRVLFMSGFPAPNFRKTVGQDSHVAFVTKPWTASELLAQVRLLLEAPQA
Ga0209074_100196943	3300027787	Agricultural Soil	GFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRVLLETAPG
Ga0209074_100501353	3300027787	Agricultural Soil	DMYAAIRGESRTVRVLFMSGFPAPNFRKTIGQDPAVAFVTKPWTASEMLAQVRVLLEARP
Ga0209590_108263792	3300027882	Vadose Zone Soil	MSGFPAPNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLEAGEGPA
Ga0209488_103228601	3300027903	Vadose Zone Soil	ESRGLSVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQVRLMIDAPRA
Ga0307473_115355412	3300031820	Hardwood Forest Soil	PAPNFRKTVGQDPRVAFVTKPWTASELLAQVRLLLETSPA
Ga0307471_1001574471	3300032180	Hardwood Forest Soil	ESRGLSVLFMSGFPAPNFRKTVGQDPAVAFVTKPWTASELLAQVRLMIDAPGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036191

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences