Metagenome Family F036300

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036300
Family Type	Metagenome
Number of Sequences	170
Average Sequence Length	71 residues
Representative Sequence	MDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAVILVLVSLYAGCGLLLRKYDII
Number of Associated Samples	77
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	15.29 %
% of genes near scaffold ends (potentially truncated)	17.65 %
% of genes from short scaffolds (< 2000 bps)	71.76 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (65.294 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (55.882 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (37.059 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.00% β-sheet: 0.00% Coil/Unstructured: 35.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF13528	Glyco_trans_1_3	11.76
PF08308	PEGA	7.65
PF01040	UbiA	5.29
PF04101	Glyco_tran_28_C	2.94
PF01981	PTH2	2.94
PF08271	TF_Zn_Ribbon	1.76
PF01171	ATP_bind_3	1.76
PF10047	DUF2281	1.76
PF00586	AIRS	1.18
PF12698	ABC2_membrane_3	1.18
PF09202	Rio2_N	0.59
PF02811	PHP	0.59
PF00382	TFIIB	0.59
PF02590	SPOUT_MTase	0.59
PF04332	DUF475	0.59
PF04312	DUF460	0.59

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG1990	Peptidyl-tRNA hydrolase	Translation, ribosomal structure and biogenesis [J]	2.94
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	1.76
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.76
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	1.76
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	1.76
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.76
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	1.76
COG0478	RIO-like serine/threonine protein kinase fused to N-terminal HTH domain	Signal transduction mechanisms [T]	0.59
COG1576	23S rRNA pseudoU1915 N3-methylase RlmH	Translation, ribosomal structure and biogenesis [J]	0.59
COG2433	Possible nuclease of RNase H fold, RuvC/YqgF family	General function prediction only [R]	0.59
COG2899	Uncharacterized TerC-related membrane protein, DUF475 domain	Inorganic ion transport and metabolism [P]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.29 %
Unclassified	root	N/A	34.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.29 %
Unclassified	root	N/A	34.71 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	65.29 %
Unclassified	root	N/A	34.71 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	64.71 %
Unclassified	root	N/A	34.71 %

Name	Rank	Taxonomy	Distribution
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	64.71 %
Unclassified	root	N/A	34.71 %

Name	Rank	Taxonomy	Distribution
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	64.71 %
Unclassified	root	N/A	34.71 %

Name	Rank	Taxonomy	Distribution
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	47.65 %
Unclassified	root	N/A	34.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.71 %
Methanoregulaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	24.71 %
unclassified Methanomicrobiales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales	4.71 %
Methanocorpusculaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanocorpusculaceae	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.71 %
Methanoregula	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	10.59 %
Methanomicrobiales archaeon HGW-Methanomicrobiales-1	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-1	4.12 %
Methanomicrobiales archaeon HGW-Methanomicrobiales-3	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-3	0.59 %
Methanocorpusculaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanocorpusculaceae	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.71 %
Methanoregula formicica	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	4.12 %
Methanomicrobiales archaeon HGW-Methanomicrobiales-1	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-1	4.12 %
Methanoregula boonei	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	2.94 %
Methanomicrobiales archaeon HGW-Methanomicrobiales-3	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-3	0.59 %
Methanocorpusculaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanocorpusculaceae	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000030\|WSSedB1B_c033464	Not Available	675	Open in IMG/M
3300000309\|WSSedA1BaDRAFT_1000099	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	18943	Open in IMG/M
3300000313\|WSSedB1CaDRAFT_10030416	Not Available	1069	Open in IMG/M
3300000894\|WSSedL1B2DRAFT_1004194	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1362	Open in IMG/M
3300000894\|WSSedL1B2DRAFT_1009516	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	846	Open in IMG/M
3300001213\|JGIcombinedJ13530_100925661	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	581	Open in IMG/M
3300001279\|JGI20214J14112_1013863	Not Available	1324	Open in IMG/M
3300001279\|JGI20214J14112_1082083	Not Available	517	Open in IMG/M
3300002961\|JGI11641J44799_10000325	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	14030	Open in IMG/M
3300002961\|JGI11641J44799_10000633	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	10696	Open in IMG/M
3300002961\|JGI11641J44799_10008009	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	3198	Open in IMG/M
3300002988\|FeGlu_10214697	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	769	Open in IMG/M
3300003432\|JGI20214J51088_10003056	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	11052	Open in IMG/M
3300003432\|JGI20214J51088_10008633	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	6763	Open in IMG/M
3300003432\|JGI20214J51088_10037296	Not Available	3362	Open in IMG/M
3300003432\|JGI20214J51088_10071983	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	2419	Open in IMG/M
3300003432\|JGI20214J51088_10144879	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1680	Open in IMG/M
3300003432\|JGI20214J51088_10217031	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1342	Open in IMG/M
3300003432\|JGI20214J51088_10232960	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1287	Open in IMG/M
3300003541\|JGI20214J51650_10696860	Not Available	712	Open in IMG/M
3300003858\|Ga0031656_10016878	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3058	Open in IMG/M
3300003858\|Ga0031656_10086152	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	1166	Open in IMG/M
3300003858\|Ga0031656_10208568	Not Available	669	Open in IMG/M
3300003859\|Ga0031653_10031261	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1485	Open in IMG/M
3300003859\|Ga0031653_10043792	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	1223	Open in IMG/M
3300003860\|Ga0031658_1002076	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3639	Open in IMG/M
3300003860\|Ga0031658_1003763	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	2683	Open in IMG/M
3300003860\|Ga0031658_1012080	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1463	Open in IMG/M
3300003860\|Ga0031658_1052165	Not Available	707	Open in IMG/M
3300003860\|Ga0031658_1079579	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	582	Open in IMG/M
3300003861\|Ga0031654_10021694	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	1866	Open in IMG/M
3300003861\|Ga0031654_10048989	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1188	Open in IMG/M
3300003910\|JGI26437J51864_10028049	Not Available	1201	Open in IMG/M
3300003910\|JGI26437J51864_10157177	Not Available	528	Open in IMG/M
3300004072\|Ga0055512_10035543	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	826	Open in IMG/M
3300004154\|Ga0066603_10188689	Not Available	929	Open in IMG/M
3300004282\|Ga0066599_100927978	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	626	Open in IMG/M
3300004481\|Ga0069718_10068288	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3471	Open in IMG/M
3300004481\|Ga0069718_10145969	Not Available	1163	Open in IMG/M
3300004481\|Ga0069718_10156688	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1833	Open in IMG/M
3300004481\|Ga0069718_16074538	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-1	904	Open in IMG/M
3300005208\|Ga0069003_10067539	Not Available	638	Open in IMG/M
3300006224\|Ga0079037_101158603	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	768	Open in IMG/M
3300006930\|Ga0079303_10001156	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	6833	Open in IMG/M
3300006930\|Ga0079303_10023251	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	2018	Open in IMG/M
3300006930\|Ga0079303_10259278	Not Available	709	Open in IMG/M
3300006930\|Ga0079303_10280460	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	685	Open in IMG/M
3300009078\|Ga0105106_10000235	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	39047	Open in IMG/M
3300009091\|Ga0102851_10578103	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	1170	Open in IMG/M
3300009091\|Ga0102851_11668755	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-1	715	Open in IMG/M
3300009111\|Ga0115026_10686413	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	788	Open in IMG/M
3300009111\|Ga0115026_11229934	Not Available	611	Open in IMG/M
3300009111\|Ga0115026_11586634	Not Available	548	Open in IMG/M
3300009120\|Ga0117941_1000121	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	33328	Open in IMG/M
3300009153\|Ga0105094_10150668	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-1	1325	Open in IMG/M
3300009169\|Ga0105097_10018299	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	3685	Open in IMG/M
3300009179\|Ga0115028_10230875	Not Available	1194	Open in IMG/M
3300009179\|Ga0115028_11470237	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	577	Open in IMG/M
3300011340\|Ga0151652_14093666	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	540	Open in IMG/M
3300014261\|Ga0075360_1030366	Not Available	824	Open in IMG/M
3300014303\|Ga0075358_1015828	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-1	1027	Open in IMG/M
3300018029\|Ga0187787_10021696	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1726	Open in IMG/M
(restricted) 3300023177\|Ga0233423_10002410	Not Available	9114	Open in IMG/M
3300024056\|Ga0124853_1192290	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1703	Open in IMG/M
3300025963\|Ga0210146_1000023	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	10294	Open in IMG/M
3300025975\|Ga0210091_1001245	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-3	2293	Open in IMG/M
3300026026\|Ga0210129_1012580	Not Available	1286	Open in IMG/M
3300026349\|Ga0256811_1032157	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	565	Open in IMG/M
3300026353\|Ga0256818_1034763	Not Available	517	Open in IMG/M
3300026492\|Ga0256802_1023098	Not Available	774	Open in IMG/M
3300027715\|Ga0208665_10007860	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	2519	Open in IMG/M
3300027715\|Ga0208665_10031678	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1473	Open in IMG/M
3300027800\|Ga0209800_10272797	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	718	Open in IMG/M
3300027841\|Ga0209262_10033208	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2256	Open in IMG/M
3300027877\|Ga0209293_10041606	Not Available	1829	Open in IMG/M
3300027877\|Ga0209293_10374025	Not Available	735	Open in IMG/M
3300027885\|Ga0209450_10048999	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	2602	Open in IMG/M
3300027885\|Ga0209450_10058287	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	2419	Open in IMG/M
3300027885\|Ga0209450_10113445	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1820	Open in IMG/M
3300027885\|Ga0209450_10186878	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1456	Open in IMG/M
3300027887\|Ga0208980_10071784	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2022	Open in IMG/M
3300027887\|Ga0208980_10076839	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-1	1953	Open in IMG/M
3300027887\|Ga0208980_10164594	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1298	Open in IMG/M
3300027887\|Ga0208980_10216807	Not Available	1116	Open in IMG/M
3300027887\|Ga0208980_10252126	Not Available	1026	Open in IMG/M
3300027887\|Ga0208980_10336992	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-1	873	Open in IMG/M
3300027887\|Ga0208980_10346862	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	859	Open in IMG/M
3300027890\|Ga0209496_10125730	Not Available	1138	Open in IMG/M
3300027896\|Ga0209777_10268825	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1332	Open in IMG/M
3300027897\|Ga0209254_10009904	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	8755	Open in IMG/M
3300027897\|Ga0209254_10067158	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3077	Open in IMG/M
3300027897\|Ga0209254_10109730	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2304	Open in IMG/M
3300027899\|Ga0209668_10037696	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	2526	Open in IMG/M
3300027899\|Ga0209668_10046427	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2317	Open in IMG/M
3300027899\|Ga0209668_10056789	Not Available	2133	Open in IMG/M
3300027899\|Ga0209668_10191342	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1268	Open in IMG/M
3300027899\|Ga0209668_10216630	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1199	Open in IMG/M
3300027899\|Ga0209668_10334913	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	979	Open in IMG/M
3300027899\|Ga0209668_10387284	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	913	Open in IMG/M
3300027899\|Ga0209668_10418634	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-1	879	Open in IMG/M
3300027899\|Ga0209668_10440705	Not Available	858	Open in IMG/M
3300027899\|Ga0209668_10492818	Not Available	812	Open in IMG/M
3300027899\|Ga0209668_10620443	Not Available	723	Open in IMG/M
3300027900\|Ga0209253_10113039	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2219	Open in IMG/M
3300027900\|Ga0209253_10200470	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1594	Open in IMG/M
3300027900\|Ga0209253_10479830	Not Available	931	Open in IMG/M
3300027902\|Ga0209048_10003632	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	14941	Open in IMG/M
3300027902\|Ga0209048_10046283	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3583	Open in IMG/M
3300027902\|Ga0209048_10593107	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	739	Open in IMG/M
3300027902\|Ga0209048_10599707	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	734	Open in IMG/M
3300027979\|Ga0209705_10001993	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	10916	Open in IMG/M
3300031707\|Ga0315291_10078354	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	3622	Open in IMG/M
3300031707\|Ga0315291_10678043	Not Available	919	Open in IMG/M
3300031707\|Ga0315291_11038873	Not Available	685	Open in IMG/M
3300031707\|Ga0315291_11117054	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	652	Open in IMG/M
3300031707\|Ga0315291_11291761	All Organisms → cellular organisms → Archaea	589	Open in IMG/M
3300031746\|Ga0315293_10061136	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3248	Open in IMG/M
3300031746\|Ga0315293_10170888	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1804	Open in IMG/M
3300031746\|Ga0315293_10355113	Not Available	1163	Open in IMG/M
3300031746\|Ga0315293_10504959	Not Available	933	Open in IMG/M
3300031746\|Ga0315293_10911574	Not Available	634	Open in IMG/M
3300031746\|Ga0315293_11193659	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	529	Open in IMG/M
3300031772\|Ga0315288_10203916	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2146	Open in IMG/M
3300031772\|Ga0315288_11435122	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	575	Open in IMG/M
3300031834\|Ga0315290_10742752	Not Available	843	Open in IMG/M
3300031834\|Ga0315290_10770012	Not Available	825	Open in IMG/M
3300031952\|Ga0315294_10290945	Not Available	1574	Open in IMG/M
3300031952\|Ga0315294_11537843	Not Available	518	Open in IMG/M
3300031997\|Ga0315278_10447137	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1332	Open in IMG/M
3300031997\|Ga0315278_10868506	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	907	Open in IMG/M
3300031997\|Ga0315278_11572582	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	630	Open in IMG/M
3300031999\|Ga0315274_10136950	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	3127	Open in IMG/M
3300031999\|Ga0315274_11160913	Not Available	769	Open in IMG/M
3300031999\|Ga0315274_11646718	Not Available	599	Open in IMG/M
3300031999\|Ga0315274_11970225	Not Available	526	Open in IMG/M
3300032046\|Ga0315289_10215764	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2076	Open in IMG/M
3300032053\|Ga0315284_10067197	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula boonei	4874	Open in IMG/M
3300032053\|Ga0315284_10193714	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2635	Open in IMG/M
3300032053\|Ga0315284_10707155	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1182	Open in IMG/M
3300032053\|Ga0315284_10868543	Not Available	1034	Open in IMG/M
3300032053\|Ga0315284_10902306	Not Available	1008	Open in IMG/M
3300032053\|Ga0315284_11558502	Not Available	697	Open in IMG/M
3300032053\|Ga0315284_11835470	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	623	Open in IMG/M
3300032053\|Ga0315284_12091430	Not Available	569	Open in IMG/M
3300032118\|Ga0315277_10573356	Not Available	1114	Open in IMG/M
3300032118\|Ga0315277_10813307	Not Available	880	Open in IMG/M
3300032118\|Ga0315277_11291547	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	640	Open in IMG/M
3300032118\|Ga0315277_11691993	Not Available	531	Open in IMG/M
3300032143\|Ga0315292_10087540	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2406	Open in IMG/M
3300032143\|Ga0315292_10548108	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	974	Open in IMG/M
3300032156\|Ga0315295_10192839	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2043	Open in IMG/M
3300032163\|Ga0315281_11800490	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	591	Open in IMG/M
3300032342\|Ga0315286_10001504	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	21117	Open in IMG/M
3300032342\|Ga0315286_10952298	Not Available	857	Open in IMG/M
3300032342\|Ga0315286_11943376	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanocorpusculaceae	548	Open in IMG/M
3300032342\|Ga0315286_12099260	Not Available	522	Open in IMG/M
3300032397\|Ga0315287_10298310	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1898	Open in IMG/M
3300032397\|Ga0315287_11824511	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	676	Open in IMG/M
3300032401\|Ga0315275_11663508	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	681	Open in IMG/M
3300032516\|Ga0315273_10777690	Not Available	1249	Open in IMG/M
3300032516\|Ga0315273_12769628	Not Available	557	Open in IMG/M
3300033413\|Ga0316603_10434283	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1194	Open in IMG/M
3300033418\|Ga0316625_100512481	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	950	Open in IMG/M
3300033433\|Ga0326726_10000273	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	49899	Open in IMG/M
3300033433\|Ga0326726_10001022	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	25755	Open in IMG/M
3300033433\|Ga0326726_10054211	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	3510	Open in IMG/M
3300033433\|Ga0326726_11417205	Not Available	676	Open in IMG/M
3300033482\|Ga0316627_101212699	Not Available	747	Open in IMG/M
3300033488\|Ga0316621_10312630	Not Available	1038	Open in IMG/M
3300033557\|Ga0316617_102071289	Not Available	585	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	88.82%
Terrestrial	Environmental → Terrestrial	11.18%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	70.00%
Marine	Environmental → Aquatic → Marine	18.24%
Soil	Environmental → Terrestrial → Soil	5.29%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.53%
Peat	Environmental → Terrestrial → Peat	2.35%
Sediment	Environmental → Aquatic → Sediment	0.59%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	30.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	23.53%
Wetlands	Environmental → Aquatic → Marine → Wetlands	18.24%
Sediment	Environmental → Aquatic → Freshwater → Sediment	9.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.71%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	3.53%
Pond	Environmental → Aquatic → Freshwater → Pond	2.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	29.41%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	23.53%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	15.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	9.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.71%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	3.53%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.35%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.35%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	2.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.35%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	29.41%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	23.53%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	15.29%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	4.71%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	3.53%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	2.35%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.35%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.35%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	2.35%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.35%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	1.76%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.18%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.59%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	0.59%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.59%
Wetland Sediment	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Wetland Sediment	0.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000030	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Bulk	Environmental	Open in IMG/M
3300000309	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300000313	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Cattail	Environmental	Open in IMG/M
3300000894	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site L1 Bulk	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001279	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300002988	Fe-reducing enrichment culture from wetland sample 1	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003859	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300003910	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW	Environmental	Open in IMG/M
3300004072	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2	Environmental	Open in IMG/M
3300004154	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005208	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D2	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009120	Lake sediment microbial communities from Tanners Lake, St. Paul, MN	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300014261	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D1	Environmental	Open in IMG/M
3300014303	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D1	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300023177 (restricted)	Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_112_MG	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025963	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025975	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026026	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026349	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PU6	Environmental	Open in IMG/M
3300026353	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PR4	Environmental	Open in IMG/M
3300026492	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 CS5	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027800	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedB1B_0334641	3300000030	Wetland	MDDMVAQGFGAIVIIYGGLIVIALGIAFFITEIWDALVSGDTSFILFWCATILVVISLYAGFGLLLRKYGII*
WSSedA1BaDRAFT_10000992	3300000309	Wetland	VNMDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAVILVLVSLYAGGGLLLRKYNII*
WSSedB1CaDRAFT_100304162	3300000313	Wetland	VDYPLVNMDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAVILVLVSLYAGGGLLLRKYDII*
WSSedL1B2DRAFT_10041942	3300000894	Wetland	MDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAVILVLVSLYAGGGLLLRKYNII*
WSSedL1B2DRAFT_10095162	3300000894	Wetland	MDDMVAQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGDTGFILFWCAVILVSISLYTGCGLLLRKYGII*
JGIcombinedJ13530_1009256612	3300001213	Wetland	PLVSMDDMVAQGFGAIILIYGALIVIAFGLVVFIERFWSALVTGDTGFIIWSCAIILVSVSLYTGCGLLLRKYGII*
JGI20214J14112_10138631	3300001279	Wetland	MDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAVILVLVFLYAGGGLLLRKYDII*
JGI20214J14112_10820831	3300001279	Wetland	MDDMSAQGIGAVIIIYGGLIVIAIGVVFIITKFWSALVSGDSGFILWWGPVIFVSVALYGGSGLLLRKFG
JGI11641J44799_100003251	3300002961	Wetland	VNMDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAVILVLVSLYAGGGLLLRKYDII*
JGI11641J44799_100006334	3300002961	Wetland	MDDMVAQGFGAIVLIYGGLIITALGVLFFITEFWDALVSGDIGFIIFWCAVILVSVLLYTGCGFLLRKYGIT*
JGI11641J44799_100080092	3300002961	Wetland	MDDMVAQGFGAIVIIYGGLIVIALGVVVFITKFWSALVSGDTGFILLWCTIILVLVSLYAGCGLLLRKYGII*
FeGlu_102146972	3300002988	Wetland Sediment	MDDMVAQGFGAIIIIYGALIAIAVGMVFFIERFWNALVNGDTGFILWSGAIILGSVSLYTGCGLLLRKYGII*
JGI20214J51088_100030567	3300003432	Wetland	MDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAVILVLVSLYAGGGLLLRKYDII*
JGI20214J51088_100086335	3300003432	Wetland	MDDMVAQGFGAIILIYGALILIALGVFLFIQRFWSALITGDTGFIVLSCAIILASVSLYTGCGLLLRKYGII*
JGI20214J51088_100372961	3300003432	Wetland	MDDMVAQGFGAIILIYGALIVIAFGVILFVERFWSALITGDTGFIVWSCAIILAAVSLYTSCGLLLHKYGII*
JGI20214J51088_100719833	3300003432	Wetland	MDDMVAQGFGAIVLIYGGLIIIALGILFFITEFWDALVSGNAGFIIFWCAVILVSISLYAGCGLLLRKYGIT*
JGI20214J51088_101448792	3300003432	Wetland	MDDMVAQGFGAIVIIYGGLIVIALGIAFFITEIWDALVSGDTSFILFWCATILVVISLYAGCGLLLRKYGII*
JGI20214J51088_102170312	3300003432	Wetland	MDDMIAQGFGAIVIIYGGLIVIALGVLLFITEFWDALVSGDTGFILIWCAVILVSISLYAGYGLYLRKHGII*
JGI20214J51088_102329604	3300003432	Wetland	MNMDDMVAQGFGAIVIIYGGLIVITLGIVLFISKFWDALVSGDTGFILLWCVIILALIFLYAGGGLLLRKYDII*
JGI20214J51650_106968602	3300003541	Wetland	MDDMVAQGFGAIVIIYGGLIVIALGVVVFITKFWSALVSGDTGFILLWCTIILVLVSLYAGCGLLLRK
Ga0031656_100168782	3300003858	Freshwater Lake Sediment	MDDMVAQGFGAIVIIYGGLIIIAFGVVLFITKFWNALVSGDTAFILWWCTIILVVVSLYAGGGLLLRKYGII*
Ga0031656_100861522	3300003858	Freshwater Lake Sediment	MDDMVVQGFGAIVIIYGGLIVIALGVVLFITKFWSALVSGDTGFILWWCATILVLVSLYAGCGLLLRKYEII*
Ga0031656_102085681	3300003858	Freshwater Lake Sediment	MDAMVAQGFGAIVIIYGGLIVITLGIALFITKFWNALVSGDTGFIVWWCAIILVLVSLYAGSGLLLRKYEIV*
Ga0031653_100312613	3300003859	Freshwater Lake Sediment	MDAMVAQGFGAIVIIYGGLIVITLGIALFIMKFWDALVSGDTGFILWWCAIILVLVSLYAGCGLLLRKYEII*
Ga0031653_100437924	3300003859	Freshwater Lake Sediment	NYPLVNMDDMVAQGFGAIVIIYGGLIIIAFGVVLFITKFWNALVSGDTAFILWWCTIILVVVSLYAGGGLLLRKYGII*
Ga0031658_10020763	3300003860	Freshwater Lake Sediment	MDDMVVQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAVILVLVSLYAGCGLLLRKYDII*
Ga0031658_10037634	3300003860	Freshwater Lake Sediment	MDDMVAQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGNTGFIIFWCAVILVSISLYAGCGFLLRKYGII*
Ga0031658_10120802	3300003860	Freshwater Lake Sediment	MDDMVVQGFGAIVLIYGGLIIIALGILFFITEFWDALVSGNTGFIIFWCSVILVSISLYAGCGILLRKHGII*
Ga0031658_10521651	3300003860	Freshwater Lake Sediment	MDDMVVQGFGAIVIIYGGLIVITLGVVFFIKKFWDALVSGDTGFILLWSAVILVLVSLYAGC
Ga0031658_10795791	3300003860	Freshwater Lake Sediment	AQGFGAIVIIYGGLIVIALGVVVFMTKFWSALVSGDTGFILLWCTIILVLVSLYAGCGLLLRKYGII*
Ga0031654_100216942	3300003861	Freshwater Lake Sediment	MDDMVAQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGNTSFIIFWCAVILVSISLYAGCGLLLRKYGII*
Ga0031654_100489892	3300003861	Freshwater Lake Sediment	MDDMVAQGFGAIVIIYGGLIVIAFGVVVFITKFWSALVSGDTGFILWCCAIILVLVSLYAGCGLLLRKNGTI*
JGI26437J51864_100280492	3300003910	Freshwater Lake Sediment	MVAQGFGAIVIIYGGLIIITLVIVLFITKFWDALVSGDTGFILWWCAIILVLVSLYAGCGLLLRKYEKI*
JGI26437J51864_101571772	3300003910	Freshwater Lake Sediment	MDDMVVQGFGAIVIIYGGLIVITLGIVFFIKKFWDALVSGDTGFILLWSMIILVLVSLYAGCGFLLRKYEII*
Ga0055512_100355431	3300004072	Natural And Restored Wetlands	DMIAQGFGAIVIIYGGLIVIALGVLLFITEFWDALVSGDTGFILIWCAVILVSISLYAGYGLYLRKHGII*
Ga0066603_101886892	3300004154	Freshwater	MDDMVVQGFGAIVIIYGGLIVITLGVVFFIKKFWDALVSGDTGFILLWSAIILVLVSLYAGCGFLLRKYEII*
Ga0066599_1009279782	3300004282	Freshwater	MVAQGFGAIVIIYGGLIIIALGILFSLTEFWHALVSGNTGFILFWCAVILVSISLYTGCGLLLRKYGIT*
Ga0069718_100682882	3300004481	Sediment	MDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAIILASVSLYTGCGLLLRKSGII*
Ga0069718_101459691	3300004481	Sediment	MDDMVAQGFGAIVIIYGGLIVITLGIVLFIMKFWHALVSGDTGFTFLWCAIILLSVLLYGGCGLLLRKYEII*
Ga0069718_101566882	3300004481	Sediment	MDDMVVQGFGAIVIIYGGLIVITLGIVFFIKKFWDALVSGDTGFILLWSAIILVLVSLYAGCGFLLRKYEII*
Ga0069718_160745381	3300004481	Sediment	MVAQGFGAIVIIYGGLIIIALGVVVFITKFWDALVSGDTGFILWWCAIILLLVSLYAGSGLLLRKYEII*
Ga0069003_100675391	3300005208	Natural And Restored Wetlands	MDDMVAQGFGAIVLIYGGLIIIALGVLFFITEFWDALVSGDTGFIIFWCAVILVSVLLYTGCGFLLRKYGIT*
Ga0079037_1011586032	3300006224	Freshwater Wetlands	MDDMVVQGFGAIVIIYGGLIVITLGVVFFIKKFWDALVSGDTGFILLWSAVILVLVSLYAGCGFLLRKYEII*
Ga0079303_100011563	3300006930	Deep Subsurface	MDDMVAQGFGAIVIIYGGLIVITLGIVLFMTKFWHALVSGDTGFILLWCAIILVSVSLYGGCGLLLRKYEII*
Ga0079303_100232512	3300006930	Deep Subsurface	MDDMVAQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGNTGFIIFWCAVILVSISLYAGCGLLLRKYGII*
Ga0079303_102592781	3300006930	Deep Subsurface	MDDMVVQGFGAIVIIYGGLIVITLGVVFFIKKFWDALVSGDTGFILLWSAVILVLVSLYAGCGLLLRKYEII*
Ga0079303_102804601	3300006930	Deep Subsurface	QGFGAIVLIYGGLIIIALGILFFITEFWDALVSGNTGFIIFWCSVILVSISLYAGCGILLRKHGII*
Ga0105106_1000023519	3300009078	Freshwater Sediment	MDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCGIILASVSLYTGCGLLLRKSGII*
Ga0102851_105781033	3300009091	Freshwater Wetlands	MDDMVVQGFGAIVIIYGGLIVITLGIVLFMTKFWHALVSGDTGFILLWCAIILVSVSLYGGCGLLLRKYEII*
Ga0102851_116687552	3300009091	Freshwater Wetlands	VVQGFGAIVIIYGGLIVITLGIVFFIKKFWDALVSGDTGFILLWSAIILVLVSLYAGCGFLLRKYEII*
Ga0115026_106864131	3300009111	Wetland	MDDMVVQGFGAIVIIYGGLIIITLGIVFFIKKFWDALVSGDTGFILLWSAIILVLVSLYAGCGFLLRKYEII*
Ga0115026_112299342	3300009111	Wetland	MDDMVAQGFGAIVIIYGGLIVITLGIVLFMTKFWHALVSGDTGFILLLCAIILLSVSLYGGCGLLLRKYEII*
Ga0115026_115866342	3300009111	Wetland	VAQGFGAIVIIYGGLIVITLGIVLFMTKFWHALVSGDTGFILLWCAIILLSVSLYGGCGLLLRKYEII*
Ga0117941_100012123	3300009120	Lake Sediment	MDDMVVQGFGAIVIIYGGLIVITLGIVFFILRFWDALVSGDTGFILLWSALILVLVSLYAGCGLLLRKYEII*
Ga0105094_101506682	3300009153	Freshwater Sediment	MVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCGIILASVSLYTGCGLLLRKSGII*
Ga0105097_100182993	3300009169	Freshwater Sediment	MDDMVAQGFGAIIIIYGALIAIAVGIVFFIERFWNALVNGDTGFILWSGAIILGSVSLYTGCGLLLRKYGII*
Ga0115028_102308752	3300009179	Wetland	MDDMVVQGFGAIVIIYGGLIVITLGIVFFIKKFWDALVSGDTGFILLWSAVILVLVSLYAGCGLLLRKYEII*
Ga0115028_114702372	3300009179	Wetland	MVAQGFGAIVIIYGGLIVIALGVILFFMEFWDALVSGDTGFIVVWCVIILAVVFLYAGCGFLLRKYGII*
Ga0151652_140936661	3300011340	Wetland	AIVLIYGGLIITALGVLFFITEFWDALVSGDIGFIIFWCAVILVSVLLYTGCGFLLRKYGIT*
Ga0075360_10303662	3300014261	Natural And Restored Wetlands	MDDMVAQGFGAIVLIYCGLIIIALGILFFITEFWDALVSGDTGFILIWCAVILVSISLYAGYGLYLRKHGII*
Ga0075358_10158283	3300014303	Natural And Restored Wetlands	AIVIIYGGLIVITLGIVLFISKFWDALVSGDTGFILLWCVVILALIFLYAGGGLLLRKYDII*
Ga0187787_100216962	3300018029	Tropical Peatland	MVAQGYGAIVIIYGGLIVIALGAILFITKFWHALVTGDTSFILMWSAIILVLVSLYTGCGLSLRKYGII
(restricted) Ga0233423_100024107	3300023177	Freshwater	MDDMVAQGFGAIIIIYGLLIVIFLAVLSSALTFWHALASGDTGFILFWCAVILISLSLYTGCGLYLRKSGII
Ga0124853_11922905	3300024056	Freshwater Wetlands	MDDMVAQGFGAIVIIYGGLIVITLGIVLFMTKFWHALVSGDTGFILLWCAIILVSVSLYGGCGLLLRKYEII
Ga0210146_10000233	3300025963	Natural And Restored Wetlands	MDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAVILVLVSLYAGGGLLLRKYDII
Ga0210091_10012451	3300025975	Natural And Restored Wetlands	MDDMVAQGFGAIVIIYGGLIVIALGVVVFITKFWSALVSGDTGFILLWCTIILVLVSLYAGCGLLLRKYGIT
Ga0210129_10125802	3300026026	Natural And Restored Wetlands	MDDMVAQGFGAIVLIYGGLIITALGVLFFITEFWDALVSGDIGFIIFWCAVILVSVLLYTGC
Ga0256811_10321571	3300026349	Sediment	MVAQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGNTGFIVFWCAVILVSISLYAGCGLLLRKYGII
Ga0256818_10347631	3300026353	Sediment	YLLVNMDDMVAQGYGAIVIIYGGLIIIALGVILFIMKFWHALVSGDTGFILMWSAIILVLVSLYAGCGFSLRKYGII
Ga0256802_10230981	3300026492	Sediment	MDDMVAQGFGAIVLIYGGLIIIALGVLFFITKFWDALVSGDTGFIIFWCAVILVSLSLYTGCGLLLRKYGIT
Ga0208665_100078602	3300027715	Deep Subsurface	MDDMVAQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGNTGFIIFWCAVILVSISLYAGCGLLLRKYGII
Ga0208665_100316782	3300027715	Deep Subsurface	MDDMVVQGFGAIVIIYGGLIIITLGIVFFIKKFWDALVSGDTGFILLWSAVILVLVSLYAGCGLLLRKYEII
Ga0209800_102727972	3300027800	Freshwater	MDDMVVQGFGAIVIIYGGLIVIALGVVLFITKFWNALVSGDTGFILWWCAIILVLVSLYTGGGLLLRKYGII
Ga0209262_100332083	3300027841	Freshwater	MDDMVVQGFGAIVIIYGGLIVITLGIVFFIKKFWDALVSGDTGFILLWSAIILVLVSLYAGCGFLLRKYEII
Ga0209293_100416061	3300027877	Wetland	MDDMVAQGFGAIVIIYGGLIVITLGIVLFMTKFWHALVSGDTGFILLWCAIILLSVSLYGGCGLLLRKYEII
Ga0209293_103740252	3300027877	Wetland	MDDMVVQGFGAIVIIYGGLIIITLGIVFFIKKFWDALVSGDTGFILLWSAIILVLVSLYAGCGFLLRKYEII
Ga0209450_100489994	3300027885	Freshwater Lake Sediment	MDDMVAQGFGAIVIIYGGLIIIALGILFSITEFWHALVSGNSGFILFWCAVILVSISLYTGCGLLLRKYGIT
Ga0209450_100582874	3300027885	Freshwater Lake Sediment	MDDMVAQGFGAIVIIYGGLIIITLVIVLFITKFWDALVSGDTGFILWWCAIILVLVSLYAGCGLLLRKYEKI
Ga0209450_101134454	3300027885	Freshwater Lake Sediment	MDDMVVQGFGAIVIIYGGLIVITLGIVFFIKKFWDALVSGDTGFILLWSMIILVLVSLYAGCGFLLRKYEII
Ga0209450_101868782	3300027885	Freshwater Lake Sediment	MNMDDMVAQGFGAIVIIYGGLIVIALGVVVFITKFWSALVSDDTGFILLWSAVILVLVSLYAGCGFLLRKYEII
Ga0208980_100717842	3300027887	Wetland	MDDMVAQGFGAIVIIYGGLIVIALGVVVFITKFWSALVSGDTGFILLWCTIILVLVSLYAGCGLLLRKYGII
Ga0208980_100768393	3300027887	Wetland	MDDMVAQGYGAIVIIYGGLIIIALGVILFIMKFWHALVSGDTGFILMWSAIILVLVSLYAGCGFSLRKYGII
Ga0208980_101645942	3300027887	Wetland	MDDMVAQGFGAIVLIYGGLIITALGVLFFITEFWDALVSGDIGFIIFWCAVILVSVLLYTGCGFLLRKYGIT
Ga0208980_102168071	3300027887	Wetland	MDDMVAQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGDTGFILFWCAVILVSISLYTGCGLLLRKYGII
Ga0208980_102521262	3300027887	Wetland	MDDMVAQGFGAIVLIYGGLIIIALGVLFFITKFWDALVSGDTGFIIFWCAIILVSLSLYTGCGLLLRKYGIT
Ga0208980_103369922	3300027887	Wetland	MDDMVAQGFGAIVIIYGGLIVIALGILFFITEFWDALVSGDTGFILFWCAVILVSLSLYTGCGLLLRKYGITXND
Ga0208980_103468621	3300027887	Wetland	MDDMVAQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGNTGFIIFWCAVILASISLYAGCGLLLRKYGII
Ga0209496_101257302	3300027890	Wetland	MDDMVVQGFGAIVIIYGGLIVITLGIVFFIKKFWDALVSGDTGFILLWSAVILVLVSLYAGCGLLLRKYEII
Ga0209777_102688253	3300027896	Freshwater Lake Sediment	MDDMVAQGFGAIVIIYGGLIIIALGILFFITEFWDALVSGNTGFILFWCAVILVSISLYTGCGLLLRRYGIT
Ga0209254_100099045	3300027897	Freshwater Lake Sediment	MDDMVVQGFGAIVIIYGGLIVIALGVVLFITKFWSALVSGDTGFILWWCATILVLVSLYAGCGLLLRKYEII
Ga0209254_100671582	3300027897	Freshwater Lake Sediment	MDDMVAQGFGAIVIIYGGLIIIAFGVVLFITKFWNALVSGDTAFILWWCTIILVVVSLYAGGGLLLRKYGII
Ga0209254_101097303	3300027897	Freshwater Lake Sediment	MDAMVAQGFGAIVIIYGGLIVITLGIALFITKFWNALVSGDTGFIVWWCAIILVLVSLYAGSGLLLRKYEIV
Ga0209668_100376963	3300027899	Freshwater Lake Sediment	MDDMVVQGFGAIVLIYGGLIIIALGILFFITEFWDALVSGNTGFIIFWCSVILVSISLYAGCGILLRKHGII
Ga0209668_100464272	3300027899	Freshwater Lake Sediment	MDDMVAQGFGAIVIIYGGLIIIALGVVVFITKFWSALVSGDTGFILWWCAIILVLVSLYAGCGLLLRKNGTI
Ga0209668_100567893	3300027899	Freshwater Lake Sediment	MDDMVVQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAVILVLVSLYAGCGLLLRKYDII
Ga0209668_101913422	3300027899	Freshwater Lake Sediment	MDDMVAQGFGAIVIIYGGLIVIALGVVVFMTKFWSALVSGDTGFILLWCTIILVLVSLYAGCGLLLRKYGII
Ga0209668_102166302	3300027899	Freshwater Lake Sediment	MDDMVVQGFGAIVIIYGGLIIITLGIVFFIMKFWDALVSGDTGFILLWSAVILVLVSLYAGCGFLLRKYEII
Ga0209668_103349132	3300027899	Freshwater Lake Sediment	MDDMVAQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGNTGFIIFWCAVILVSISLYAGCGFLLRKYGII
Ga0209668_103872843	3300027899	Freshwater Lake Sediment	DYLLLNMDDMVAQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGNTGFIIFWCAVILVSISLYAGCGLLLRKYGII
Ga0209668_104186342	3300027899	Freshwater Lake Sediment	MDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDSGFILWWCAIILVLASLYAGCGLLLRKYEII
Ga0209668_104407052	3300027899	Freshwater Lake Sediment	MVAQGFGAIVIIYGGLIVIALGILLFITEFWDALVSGDTGFILFWCAVILVSISLYAGYGLYLRKHGII
Ga0209668_104928182	3300027899	Freshwater Lake Sediment	MDDMVVQGFGAIVIIYGGLIVITLGVVFFIKKFWDALVSGDTGFILLWSAVILVLVSLYAGCGFLLRKYEII
Ga0209668_106204432	3300027899	Freshwater Lake Sediment	MIAQGFGAIVIIYGGLLIITLGIVFFIMKFWDALVSGDTGFILLWCAIILVLVSLYAGCGLLLRKYGII
Ga0209253_101130395	3300027900	Freshwater Lake Sediment	MDDMVAQGIGAIILIYGSLIVIFLAVLSFIIHFWRALVSGDTGFILWWGAIILITVSLYAGCGLLLRKYGKI
Ga0209253_102004702	3300027900	Freshwater Lake Sediment	MDAMVAQGFGAIVIIYGGLIVITLGIALFITKFWDALVSGDTGFILWWCAIILVLVSLYAGCGLLLRKYEKI
Ga0209253_104798301	3300027900	Freshwater Lake Sediment	MVAQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGDTGFIIFWCAVILVSISLYAGCGLLLRKYGII
Ga0209048_100036326	3300027902	Freshwater Lake Sediment	MDDMVAQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGNTSFIIFWCAVILVSISLYAGCGLLLRKYGII
Ga0209048_100462833	3300027902	Freshwater Lake Sediment	MDDMVAQGFGAIVIIYGGLIVIAFGVVVFITKFWSALVSGDTGFILMWCAIILVLVSLYAGCGLLLRRYGII
Ga0209048_105931072	3300027902	Freshwater Lake Sediment	MDDMVAQGFGAIVIIYGGLIVIAFGIVLFITKFWSALVSGDTGFILWWCAIILVLVSLYAGCGLLLRKNGTI
Ga0209048_105997072	3300027902	Freshwater Lake Sediment	MDDMVAQGFGAIVIIYGGLIVIAFGVVVFITKFWSALVSGDTGFILWCCAIILVLVSLYAGCGLLLRKNGTI
Ga0209705_100019937	3300027979	Freshwater Sediment	MDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCGIILASVSLYTGCGLLLRKSGII
Ga0315291_100783542	3300031707	Sediment	MDDMVAQGFGAIVIIYGGLIIIAFGVVLFITKFWSALVSGDTGFILWWCAIILVLVSLYAGCGLLLRKNGTI
Ga0315291_106780432	3300031707	Sediment	MDEMIAQGFGAIVLIYGGLIVIALGVVLFITKFWSALVSGDTSFILWWCATILVLVSLYAGCGLLLRKYEII
Ga0315291_110388731	3300031707	Sediment	MDDMVVQGFGAIVIIYGGLIVITLGVVLFITKFWNALVSGDTGFILWWCAIILVLVSLYTGGGLLLRKYGII
Ga0315291_111170542	3300031707	Sediment	MVAQGVGAIVIIYGGLIVIALGVLLFITEFWDALVSGDTGFILFWCAVILVSISLYAGYGLYLRKHGII
Ga0315291_112917611	3300031707	Sediment	MDDMVAQGIGAIILIYGSLIVIFLAVLSFIIHFWRALVSGDTGFILWWGAIILISVSLYAGCGLLLRKFGKI
Ga0315293_100611365	3300031746	Sediment	MDDMVVQGFGAIVIIYGGLIVIALGVVLFITKFWDALVSGDTGFILWWCATILVLVSLYAGCGLLLRKYEII
Ga0315293_101708883	3300031746	Sediment	MDEMVVQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGNTGFILFWCTVILVSISLYTGCGLLLRKYGIT
Ga0315293_103551132	3300031746	Sediment	MDDMVAQGVGAIVIIYGGLIVIALGVLLFITEFWDALVSGDTGFILFWCAVILVSISLYAGYGLYLRKHGII
Ga0315293_105049592	3300031746	Sediment	QGFGAIVIIYGGLIVITLGVVLFITKFWNALVSGDTGFILWWCAIILVLVSLYTGGGLLLRKYGII
Ga0315293_109115742	3300031746	Sediment	DAMVAQGFGAIIIIYGGLIVIALGVVFVITEFRDALVSGDTGFILFWCAILLASASLYTGFGLVLRKYGII
Ga0315293_111936592	3300031746	Sediment	MVAQGFGAIVIIYGGLIIIALGILFFITEFWDALVSGNTGFILFWCAVILVSISLYTGCGLLLRKYGIT
Ga0315288_102039163	3300031772	Sediment	MDAMVAQGFGAIIIIYGGLIVIALGVVFVITEFRDALVSGDTGFILFWCAILLASASLYTGFGLVLRKYGII
Ga0315288_114351222	3300031772	Sediment	IVLIYGGLIVIALGILFFITEFWDALVSGNTGFILFWCTVILVSISLYTGCGLLLRKYGI
Ga0315290_107427522	3300031834	Sediment	MDDMIAQGFGAIVIIYGGLIVIALGILLLITEFWDALVSENTGFILFWCAVILVSISLYTGCGLLLRKYGIT
Ga0315290_107700121	3300031834	Sediment	MDDMVAQGFGAIVIIYGGLIVIAFGIVVFITKFWSALVSGDTGFILWWCAIILVLVSLYAGCGLLLRKNGTI
Ga0315294_102909451	3300031952	Sediment	MDEMIAQGFGAIVLIYGGLIVIALGVVLFITKFWSALVSGDTGFILWWCATILVLVSLYAGCGLLL
Ga0315294_115378431	3300031952	Sediment	MDDMVAQGFGAIVIIYGGLIIIAFGIVVFITKFWSALVSGDTGFILWWCAIILVLVSLYAGCGLLLRKNGTI
Ga0315278_104471371	3300031997	Sediment	IVLIYGGLIVIAFGVVLFITNFWSALVSGDTGFILWWCATILVLVSLYAGCGLLLRKYEI
Ga0315278_108685063	3300031997	Sediment	MDDMVAQGFGAIVIIYGGLIVIALGVLLFITEFWDALVSGDTGFILFWCAVILVSISLYAGYGLYLRKHGII
Ga0315278_115725822	3300031997	Sediment	MIAQGFGAIVIIYGGLIVIALGILLLITEFWDALVSENTGFILFWCAVILVSISLYTGCGLLLRKYGIT
Ga0315274_101369507	3300031999	Sediment	VNMDDMVAQGFGAIVIIYGGLIVIAFGVVVFITKFWSALVSGDTGFILMWCAIILVLVSLYAGCGLLLRRYGII
Ga0315274_111609131	3300031999	Sediment	MDDMVAQGFGAIVIIYGGLIIIAFGVVVFITKFWSALVSGDTGFILWWCALILVLVSLYAGCGLLLRKNGTI
Ga0315274_116467182	3300031999	Sediment	MIMDDMVAQGIGAIILIYGSLIVIFLAVLSFIIHFWRALVSGDTGFILWWGAIILISVSLYAGCGLLLRKFGKI
Ga0315274_119702251	3300031999	Sediment	MDDMVAQGFGAIVIIYGGLIIIAFGIVVFITKFWSALVSGDTGFIFWWCAIILVLVSLYAGCGLL
Ga0315289_102157643	3300032046	Sediment	MDDMVAQGIGAIILIYGSLIVIFLAVLSFIIHFWRALVSGDTGFILWWGAIILISVSLYAGCGLLLRKF
Ga0315284_100671972	3300032053	Sediment	MDDMVAQGFGAIVIIYGGLIIIAFGVVVFITKFWSALVSGDTGFILWWCAIILVLVSLYAGCGLLLRKNGTI
Ga0315284_101937143	3300032053	Sediment	MDDMVAQGFGAIVIIYGGLIVIAVGVAVFITRFWSALVSGDTALILWWCTIILVVVSLYAGGGLLLRKYDII
Ga0315284_107071553	3300032053	Sediment	MDDMVAQGIGAIILIYGSLIVIFLAVLSFIIHFWRALVSGDTGFILWWGAIILISVSLYAGSGLLLRKFGKI
Ga0315284_108685432	3300032053	Sediment	MNMDDMIAQGFGAIVIIYGGLIIITLGIVFFIMKFWDALVSGDTGFILLWCAIILVLVSLYAGCGLLLRKYGII
Ga0315284_109023062	3300032053	Sediment	MVVQGFGAIVIIYGGLIVITLGVVLFITKFWNALVSGDTGFILWWCAIILVLVSLYTGGGLLLRKYGII
Ga0315284_115585022	3300032053	Sediment	MDDMVAQGFGAIVIIYGGLIIIALGILFFITEFWDALVSGNTGFILFWCAVILVSISLYTGCGLLLRKYGIT
Ga0315284_118354702	3300032053	Sediment	MVAQGFGAIIIIYGGLIVIALGVVFVITEFWDALVSGDTGFILFWCAILLALASLYTGFGLVLRKCGII
Ga0315284_120914302	3300032053	Sediment	MDAMVAQGFGAIIIIYGGLIVIALGVVFVITEFRDALVSGDTGFILFWCAILLASASLYTGFGLVLRKYGIIXNDGKKDRNGVAKQVMDYKYG
Ga0315277_105733562	3300032118	Sediment	MDDMVAQGIGAIIIIYGSFIVIFLAVLSFIMHLWHALVSGDTVFILFWGAIILVSVSLYAACGLFLRKSGII
Ga0315277_108133072	3300032118	Sediment	MDDMVAQGIGAIILIYGSLIVIFLAVLSFIIHFWRALVSGDTGFILWWGAIILISVSLYAGCGL
Ga0315277_112915472	3300032118	Sediment	MDDMVAQGIGAIILIYGSLIVIFLAVLSFTIHFWRALVSGDSGFILWWGAIILISVSLYAGCGLLLRKFGKI
Ga0315277_116919931	3300032118	Sediment	IIYGSFIVIFLAVLTFIMHLWHALVSGDTGFILVWCTVILVSVTLYAGCGLLLRKYGII
Ga0315292_100875402	3300032143	Sediment	MDEMIAQGFGAIVLIYGGLIVIALGVVLFITKFWSALVSGDTGFILWWCATILVLVSLYAGCGLLLRKYEII
Ga0315292_105481082	3300032143	Sediment	MVAQGFGAIVIIYGGLIIIAFGIVVFITKFWSALVSGDTGFILWWCAIILVLVSLYAGCGLLLRKNGTI
Ga0315295_101928392	3300032156	Sediment	VNMDDMVAQGVGAIVIIYGGLIVIALGVLLFITEFWDALVSGDTGFILFWCAVILVSISLYAGYGLYLRKHGII
Ga0315281_118004902	3300032163	Sediment	MVAQGFGAIVIIYGGLIVIALGILFFITEFWDALVSGDSGFIFFWCAVILVSVSLYTGCGLLLRKHGII
Ga0315286_1000150431	3300032342	Sediment	MDEMIAQGFGAIVLIYGGLIVIAFGVVLFITKFWSALVSGDTGFILWWCATILVLVSLYAGCGLLLRKYEII
Ga0315286_109522981	3300032342	Sediment	MDDMVAQGFGAIVIIYGGLIVIAFGVVVFITKFWSALVSGDTGFILMWCAIILVLVSLYAGCGLLLRRYG
Ga0315286_119433761	3300032342	Sediment	GIGAIILIYGSLIVIFLAVLSFIIHFWRALVSGDTGFILWWGAIILISVSLYAGCGLLLRKFGKI
Ga0315286_120992601	3300032342	Sediment	MDDMVAQGIGAIILIYGSLIVIFLAVLSFIIHFWRALVSGDTGFILWGGAIILISVSLYA
Ga0315287_102983102	3300032397	Sediment	VNMDDMIAQGFGAIVIIYGGLIVIALGILLLITEFWDALVSENTGFILFWCAVILVSISLYTGCGLLLRKYGIT
Ga0315287_118245112	3300032397	Sediment	MVAQGFGAIVIIYGGLIVIALGILFFITEFWDALVSGDTGFILFWCAVILVSISLYTGCGLLLRKYGIT
Ga0315275_116635082	3300032401	Sediment	MVTQAFGAIVIIYGGLIIIALGILLFITEFRDALVSGDTGFILFWCAVILVSISLYTGCGVLLRKYGIT
Ga0315273_107776901	3300032516	Sediment	MDEMIAQGFGAIVLIYGGLIVIAFGVVLFITKFWSALVSGDTGFILWWCATILVLVSLYAGCGLLL
Ga0315273_127696281	3300032516	Sediment	MDAMVAQGFGAIIIIYGGLIVIALGVVFVVTEFRDALVSGDTGFILFWCAILLASASLYTGFGLVLRKYGIIXNDGKKNRNGVAKQVMDYKYG
Ga0316603_104342832	3300033413	Soil	MDDMVVQGFGAIVIIYGGLIVITLGIVFFIKKFWDALVSGDTGFILLWSAVILVLVSLYAGCGFLLRKYEII
Ga0316625_1005124812	3300033418	Soil	MVVQGFGAIVLIYGGLIVIALGILFFITEFWDALVSGNTGFIIFWCSVILVSISLYAGCGILLRKHGII
Ga0326726_1000027324	3300033433	Peat Soil	MDDMVAQGFGAIIIIYGGLIVIAIGVALFITKFWGALVSGDTGFIIWWCAIILVLVSLYAGCGLLLRKYGII
Ga0326726_100010226	3300033433	Peat Soil	MTMDDMVAQGFGAIIIIYGALIAIAIGAALFIERFWDAFVTGDTAFITWSCAIILGAVSLYTGCGLLLRKYEII
Ga0326726_100542112	3300033433	Peat Soil	MDDMVAQGFGAIILIYGALILIAFGVVLFIERFWSALITGDAGFIVWSCAIIFASVSLYTGCGLLLRKYGII
Ga0326726_114172051	3300033433	Peat Soil	MDDMVAQGFGAIVIIYGGLIVITLGIVLFITKFWDALVSGDTGFILLWCAVILVLVSLYAGCGLLLRKYDII
Ga0316627_1012126992	3300033482	Soil	MDDMVVQGFGAIVIIYGGLIVITFGIMFFIMKFWDALVSGDSGFILLWSAVILVLVSLYAGCGLLLRKYEII
Ga0316621_103126301	3300033488	Soil	MDDMVVQGFGAIVIIYGGLIVITLGVVFFIKKFWDALVSGDTGFILLWSAVILVLVSLYAGCGLLLRKYEII
Ga0316617_1020712891	3300033557	Soil	MDDMVVQGFGAIVIIYGGLIVITFGIMFFIMKFWDALVSGDTGFILLWSAVILVLVSLYAGCGLLLRKYEII

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters