Metagenome / Metatranscriptome Family F036444

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036444
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	64 residues
Representative Sequence	KSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Number of Associated Samples	113
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.59 %
% of genes near scaffold ends (potentially truncated)	97.06 %
% of genes from short scaffolds (< 2000 bps)	91.18 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.353 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.059 % of family members)
Environment Ontology (ENVO)	Unclassified (48.824 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.294 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.27% β-sheet: 13.19% Coil/Unstructured: 61.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF04392	ABC_sub_bind	8.24
PF06147	DUF968	1.76
PF02195	ParBc	1.76
PF13683	rve_3	1.76
PF13646	HEAT_2	1.18
PF01593	Amino_oxidase	1.18
PF13467	RHH_4	1.18
PF00498	FHA	1.18
PF13817	DDE_Tnp_IS66_C	1.18
PF07452	CHRD	0.59
PF13592	HTH_33	0.59
PF05717	TnpB_IS66	0.59
PF05598	DUF772	0.59
PF07704	PSK_trans_fac	0.59
PF04191	PEMT	0.59
PF14559	TPR_19	0.59
PF08439	Peptidase_M3_N	0.59
PF01850	PIN	0.59
PF13384	HTH_23	0.59
PF13229	Beta_helix	0.59
PF13751	DDE_Tnp_1_6	0.59
PF01068	DNA_ligase_A_M	0.59
PF01527	HTH_Tnp_1	0.59
PF01464	SLT	0.59

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	8.24
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.59
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.59
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.59
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.59
COG4423	Uncharacterized conserved protein	Function unknown [S]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.35 %
Unclassified	root	N/A	47.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.35 %
Unclassified	root	N/A	47.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.35 %
Unclassified	root	N/A	47.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.59 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.18 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.59 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.47 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.18 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.18 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.59 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.88 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.18 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.18 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	0.59 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.71 %
Rudaea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea	1.18 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.18 %
Euzebyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae	0.59 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.76 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.76 %
Rudaea cellulosilytica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea → Rudaea cellulosilytica	1.18 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.18 %
unclassified Euzebyaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae	0.59 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.76 %
Rudaea cellulosilytica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea → Rudaea cellulosilytica	1.18 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.18 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.59 %
Euzebyaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	0.59 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.59 %
Bradyrhizobium sp. BRP22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	0.59 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101554107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300000550\|F24TB_10729515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	565	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1069329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	536	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10074350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	857	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10107431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	685	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1026954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10114310	Not Available	566	Open in IMG/M
3300005332\|Ga0066388_100668817	All Organisms → cellular organisms → Bacteria → Proteobacteria	1650	Open in IMG/M
3300005332\|Ga0066388_101444820	Not Available	1198	Open in IMG/M
3300005332\|Ga0066388_106242924	Not Available	601	Open in IMG/M
3300005332\|Ga0066388_108145094	Not Available	523	Open in IMG/M
3300005363\|Ga0008090_10135673	Not Available	680	Open in IMG/M
3300005363\|Ga0008090_10150988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300005363\|Ga0008090_15613198	Not Available	717	Open in IMG/M
3300005540\|Ga0066697_10446354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	745	Open in IMG/M
3300005544\|Ga0070686_101726371	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005602\|Ga0070762_10175861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1296	Open in IMG/M
3300005610\|Ga0070763_10166686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1159	Open in IMG/M
3300005713\|Ga0066905_101388284	Not Available	635	Open in IMG/M
3300005713\|Ga0066905_101795380	Not Available	565	Open in IMG/M
3300005713\|Ga0066905_102159008	Not Available	519	Open in IMG/M
3300005764\|Ga0066903_100284061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2598	Open in IMG/M
3300005764\|Ga0066903_104768468	Not Available	721	Open in IMG/M
3300005764\|Ga0066903_107095666	Not Available	580	Open in IMG/M
3300006163\|Ga0070715_10614739	Not Available	639	Open in IMG/M
3300006175\|Ga0070712_100320913	Not Available	1259	Open in IMG/M
3300006796\|Ga0066665_10942023	Not Available	666	Open in IMG/M
3300006969\|Ga0075419_10938805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300009090\|Ga0099827_10270167	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300009147\|Ga0114129_11009339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1047	Open in IMG/M
3300009162\|Ga0075423_10377009	Not Available	1488	Open in IMG/M
3300010046\|Ga0126384_10525454	Not Available	1024	Open in IMG/M
3300010046\|Ga0126384_10960644	Not Available	776	Open in IMG/M
3300010047\|Ga0126382_10382728	Not Available	1091	Open in IMG/M
3300010048\|Ga0126373_11144639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	844	Open in IMG/M
3300010048\|Ga0126373_11919291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300010048\|Ga0126373_12576284	Not Available	567	Open in IMG/M
3300010359\|Ga0126376_12019109	Not Available	619	Open in IMG/M
3300010360\|Ga0126372_11096247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	814	Open in IMG/M
3300010361\|Ga0126378_10046531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	4016	Open in IMG/M
3300010361\|Ga0126378_10120115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2631	Open in IMG/M
3300010361\|Ga0126378_10951060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	964	Open in IMG/M
3300010361\|Ga0126378_11301776	Not Available	822	Open in IMG/M
3300010362\|Ga0126377_12976680	Not Available	547	Open in IMG/M
3300010366\|Ga0126379_10796581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1044	Open in IMG/M
3300010366\|Ga0126379_12403017	Not Available	626	Open in IMG/M
3300010366\|Ga0126379_12506472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300010366\|Ga0126379_12636789	Not Available	600	Open in IMG/M
3300010366\|Ga0126379_13346991	Not Available	537	Open in IMG/M
3300010376\|Ga0126381_100775846	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300010376\|Ga0126381_101593519	Not Available	943	Open in IMG/M
3300010398\|Ga0126383_10478296	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300010398\|Ga0126383_10977710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300010398\|Ga0126383_11146665	Not Available	867	Open in IMG/M
3300010398\|Ga0126383_13011376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300011119\|Ga0105246_10755901	Not Available	858	Open in IMG/M
3300012200\|Ga0137382_10491693	Not Available	871	Open in IMG/M
3300012204\|Ga0137374_10489212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	958	Open in IMG/M
3300012205\|Ga0137362_10239254	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300012212\|Ga0150985_110391676	Not Available	987	Open in IMG/M
3300012351\|Ga0137386_10533262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	845	Open in IMG/M
3300012356\|Ga0137371_10851416	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300012359\|Ga0137385_11524526	Not Available	532	Open in IMG/M
3300012361\|Ga0137360_11745444	Not Available	528	Open in IMG/M
3300012971\|Ga0126369_12262254	Not Available	630	Open in IMG/M
3300012985\|Ga0164308_11388541	Not Available	641	Open in IMG/M
3300013308\|Ga0157375_11099933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	930	Open in IMG/M
3300015371\|Ga0132258_10848620	Not Available	2305	Open in IMG/M
3300015371\|Ga0132258_11590599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	1650	Open in IMG/M
3300016294\|Ga0182041_11719650	Not Available	581	Open in IMG/M
3300016294\|Ga0182041_12254065	Not Available	509	Open in IMG/M
3300016319\|Ga0182033_10213262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1544	Open in IMG/M
3300016319\|Ga0182033_11142935	Not Available	696	Open in IMG/M
3300016357\|Ga0182032_11391757	Not Available	607	Open in IMG/M
3300016387\|Ga0182040_11113768	Not Available	662	Open in IMG/M
3300016387\|Ga0182040_11706452	Not Available	538	Open in IMG/M
3300016404\|Ga0182037_10449287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1071	Open in IMG/M
3300016404\|Ga0182037_10657633	Not Available	894	Open in IMG/M
3300016404\|Ga0182037_11424224	Not Available	613	Open in IMG/M
3300016404\|Ga0182037_12163856	Not Available	501	Open in IMG/M
3300016422\|Ga0182039_10750034	Not Available	864	Open in IMG/M
3300016422\|Ga0182039_11241257	Not Available	674	Open in IMG/M
3300016422\|Ga0182039_11751248	Not Available	569	Open in IMG/M
3300016445\|Ga0182038_10472405	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300016445\|Ga0182038_11709763	Not Available	567	Open in IMG/M
3300016445\|Ga0182038_11739888	Not Available	562	Open in IMG/M
3300018073\|Ga0184624_10167864	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300018073\|Ga0184624_10514250	Not Available	519	Open in IMG/M
3300018466\|Ga0190268_12229603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300019767\|Ga0190267_11201861	Not Available	556	Open in IMG/M
3300021444\|Ga0213878_10491074	Not Available	539	Open in IMG/M
3300021560\|Ga0126371_10174718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2227	Open in IMG/M
3300021560\|Ga0126371_11420299	Not Available	824	Open in IMG/M
3300021560\|Ga0126371_13823417	Not Available	507	Open in IMG/M
3300025916\|Ga0207663_10664251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300027655\|Ga0209388_1106185	Not Available	805	Open in IMG/M
3300028047\|Ga0209526_10408372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	900	Open in IMG/M
3300028047\|Ga0209526_10469428	Not Available	825	Open in IMG/M
3300028536\|Ga0137415_11307064	Not Available	543	Open in IMG/M
3300028802\|Ga0307503_10610176	Not Available	603	Open in IMG/M
3300028906\|Ga0308309_11016657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300031226\|Ga0307497_10385307	Not Available	666	Open in IMG/M
3300031231\|Ga0170824_121032128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1106	Open in IMG/M
3300031545\|Ga0318541_10021410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3098	Open in IMG/M
3300031561\|Ga0318528_10295779	All Organisms → cellular organisms → Bacteria → Proteobacteria	869	Open in IMG/M
3300031564\|Ga0318573_10619815	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300031572\|Ga0318515_10248370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	954	Open in IMG/M
3300031573\|Ga0310915_10373675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1011	Open in IMG/M
3300031573\|Ga0310915_10514184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	850	Open in IMG/M
3300031573\|Ga0310915_10586176	Not Available	790	Open in IMG/M
3300031679\|Ga0318561_10706213	Not Available	554	Open in IMG/M
3300031682\|Ga0318560_10178659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1130	Open in IMG/M
3300031719\|Ga0306917_10168948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1636	Open in IMG/M
3300031723\|Ga0318493_10814704	Not Available	526	Open in IMG/M
3300031736\|Ga0318501_10064392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1755	Open in IMG/M
3300031744\|Ga0306918_10305131	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300031747\|Ga0318502_10591094	Not Available	668	Open in IMG/M
3300031770\|Ga0318521_10165292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1263	Open in IMG/M
3300031770\|Ga0318521_10660992	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300031777\|Ga0318543_10399309	Not Available	616	Open in IMG/M
3300031779\|Ga0318566_10374381	Not Available	702	Open in IMG/M
3300031781\|Ga0318547_10677613	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	641	Open in IMG/M
3300031782\|Ga0318552_10642315	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031793\|Ga0318548_10249522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	872	Open in IMG/M
3300031798\|Ga0318523_10596638	Not Available	544	Open in IMG/M
3300031819\|Ga0318568_10350821	Not Available	918	Open in IMG/M
3300031833\|Ga0310917_10365653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea → Rudaea cellulosilytica	980	Open in IMG/M
3300031858\|Ga0310892_10505014	Not Available	806	Open in IMG/M
3300031879\|Ga0306919_10422203	Not Available	1024	Open in IMG/M
3300031879\|Ga0306919_10553446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	887	Open in IMG/M
3300031890\|Ga0306925_10156449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2453	Open in IMG/M
3300031890\|Ga0306925_11230278	Not Available	748	Open in IMG/M
3300031893\|Ga0318536_10184210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1063	Open in IMG/M
3300031910\|Ga0306923_12513614	Not Available	507	Open in IMG/M
3300031912\|Ga0306921_11199154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	845	Open in IMG/M
3300031912\|Ga0306921_12690885	Not Available	511	Open in IMG/M
3300031942\|Ga0310916_10016864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5062	Open in IMG/M
3300031945\|Ga0310913_10365238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1022	Open in IMG/M
3300031945\|Ga0310913_10962993	Not Available	599	Open in IMG/M
3300031946\|Ga0310910_10049132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2965	Open in IMG/M
3300031946\|Ga0310910_10608228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	866	Open in IMG/M
3300031946\|Ga0310910_11329916	Not Available	554	Open in IMG/M
3300031947\|Ga0310909_10863703	Not Available	744	Open in IMG/M
3300031954\|Ga0306926_10291464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2020	Open in IMG/M
3300031954\|Ga0306926_10345619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1839	Open in IMG/M
3300031954\|Ga0306926_10976824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea → Rudaea cellulosilytica	1009	Open in IMG/M
3300032001\|Ga0306922_10740161	Not Available	1032	Open in IMG/M
3300032001\|Ga0306922_12379787	Not Available	506	Open in IMG/M
3300032010\|Ga0318569_10017704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2817	Open in IMG/M
3300032025\|Ga0318507_10009925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3082	Open in IMG/M
3300032035\|Ga0310911_10038215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2443	Open in IMG/M
3300032039\|Ga0318559_10288070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300032041\|Ga0318549_10381686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300032043\|Ga0318556_10411176	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300032051\|Ga0318532_10149180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300032052\|Ga0318506_10036412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1921	Open in IMG/M
3300032052\|Ga0318506_10224027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	831	Open in IMG/M
3300032059\|Ga0318533_10116636	All Organisms → cellular organisms → Bacteria → Proteobacteria	1863	Open in IMG/M
3300032059\|Ga0318533_11049457	Not Available	597	Open in IMG/M
3300032060\|Ga0318505_10389202	Not Available	659	Open in IMG/M
3300032076\|Ga0306924_10217972	All Organisms → cellular organisms → Bacteria → Proteobacteria	2191	Open in IMG/M
3300032090\|Ga0318518_10253191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	903	Open in IMG/M
3300032091\|Ga0318577_10532885	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300032094\|Ga0318540_10088265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1446	Open in IMG/M
3300032261\|Ga0306920_101700937	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300032261\|Ga0306920_101705558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	892	Open in IMG/M
3300032261\|Ga0306920_101754707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	877	Open in IMG/M
3300032261\|Ga0306920_103085694	Not Available	626	Open in IMG/M
3300033289\|Ga0310914_10709796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	901	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.29%
Host-Associated	Host-Associated	4.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.12%
Plants	Host-Associated → Plants	4.71%
Aquatic	Environmental → Aquatic	1.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.76%
Sediment	Environmental → Aquatic → Sediment	1.18%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.35%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.18%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.76%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.18%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.76%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.18%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.18%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.59%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015541071	3300000364	Soil	KSFDLEPRQLHSAIATGSFEITEMFDQPTIKKSSLVVKFSTLGLSPNIVTLESECASKRNPNQ*
F24TB_107295152	3300000550	Soil	LIEKSFDLEFPQLQSAIETGSFEITEMFDQSVIKKPSRVVRFSTLGLSANIVALECTPWGGQA*
AF_2010_repII_A01DRAFT_10693291	3300000580	Forest Soil	RPPLNLRDFTAVDHRSQLQSAIETGIFEITEMFDQSMIKKPSVVVKFSTLGLSADLVALESKCASRSNPNQ*
AF_2010_repII_A1DRAFT_100743501	3300000597	Forest Soil	LVEKSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSPGVRFSTLGLSANVVALESKCASKSNPNQ*
AF_2010_repII_A1DRAFT_101074311	3300000597	Forest Soil	LVEKSFDLEPRQLQSAIETGSFEITEMFDQSMSKKPSLVVRFSTLGLSANVVALESKCAKE*
AF_2010_repII_A100DRAFT_10269541	3300000655	Forest Soil	PQKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSRVVKFSILGLSANIVALESKCASTQVSD*
AF_2010_repII_A001DRAFT_101143101	3300000793	Forest Soil	QLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ*
Ga0066388_1006688171	3300005332	Tropical Forest Soil	VAEKSFDLDHRQLQSAIGTGSFEITEIYDQSMIKKPSLVVKFSTLGLSANIAVLGSNCASKNNPNQ*
Ga0066388_1014448201	3300005332	Tropical Forest Soil	KDLVEKSFDLEPRQLQSAIATGSFEFTEMFDQSKKPPFAVKFSTFGLSENIVALESKCASKSNPNQ*
Ga0066388_1062429241	3300005332	Tropical Forest Soil	PRQLQSAIETGSFEIAEMFDQSMIKKTSRVVKFSTLGLSANIVALESRCTSRSTKISD*
Ga0066388_1081450941	3300005332	Tropical Forest Soil	SLDLEPRQLQSAIETGSFEITENFDQSMIKKPSLVVRFSTSGLSSNIVALESKCASKSNPSQ*
Ga0008090_101356732	3300005363	Tropical Rainforest Soil	IDLTTLNPQKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSRVVKFSILGLSANIVALESKCASTQISD*
Ga0008090_101509881	3300005363	Tropical Rainforest Soil	RQLQSAIETGSFEITEMLDQSMIKKPSPGVRFSTLGLSANVVALESKCASKSNPNQ*
Ga0008090_156131982	3300005363	Tropical Rainforest Soil	KSFDLEPRQLQSAIETGSFEFTEMFDQSKKPPFAVKFSTFGLSENILALKSKCASKSNLNR*
Ga0066697_104463541	3300005540	Soil	EKSFDVEPRQLQKAIETGSFEITEMFDQSMIKKPSLVVRFSAFGLSANIVALESKCASKSNPDQ*
Ga0070686_1017263711	3300005544	Switchgrass Rhizosphere	EKSFDLEPRQLQSAIEIGSFEITEVFDQLAIKRPSLVVRFSTLGLSANIVALESKCASKSNPNQ*
Ga0070762_101758611	3300005602	Soil	AIATGSFEITEIFDQSVIKKPSRAVSFSTVGLSTNSVALEAKCRSKSDPAQ*
Ga0070763_101666861	3300005610	Soil	AIATGSFEITEIFDQSVIKKPSRAVSFSTVGLSTNSVALETKCRSKSDLAQ*
Ga0066905_1013882842	3300005713	Tropical Forest Soil	QKDLIEKSFDLEPRQLQSAIETGSFEIAEMFDQSMIKKTSRVVKFSTLGLSANIVALESKCTSRSTKISD*
Ga0066905_1017953802	3300005713	Tropical Forest Soil	SVEKSLDLEPRQLQSAIETGSFEITENFDQSMIKKPSLVVRFSTSGLSSNIVALESKCASKSNPSQ*
Ga0066905_1021590081	3300005713	Tropical Forest Soil	QSAIETGSFEFTEMFDQSKKLPLVVKFSTLGLSENIVALESKCASKSNSNQ*
Ga0066903_1002840611	3300005764	Tropical Forest Soil	AIETGSFEITEMFDQSMIKKPSLIVRFSTLGLSANVVALESKCASKSNSNQ*
Ga0066903_1047684681	3300005764	Tropical Forest Soil	SAIETGSFEFTEMFDQTKKPPFAVKFSTFGLSENIVALESKCASKSNPNQ*
Ga0066903_1070956662	3300005764	Tropical Forest Soil	VTGLIDLPTLNSQKTFVEKSFDLEPRQLQSAIESGSFEFTEMVDQSKKPPLVVKFSTFGLSSNVVALESKCASKE*
Ga0070715_106147391	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	QLQRAIATGSFEITEIFDQSITKKPSRAVSFSTVGLSTNSVALEAKCRSKSDPAQ*
Ga0070712_1003209131	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EKSFDLEPRQLQSAIETGSLEITEIFDQSMIKKPSVVARFSTLGLSVNVAALESKCAST*
Ga0066665_109420231	3300006796	Soil	TTLKPQKALVEKYFDLEPRQLQSAIETGSFEIAEMFDQSMIKKPSRVLKFSTLGLSANIVALESKCAPKPSN*
Ga0075419_109388051	3300006969	Populus Rhizosphere	SAIEAGSFEFTEVFDQSVVKKPPRVVRFSTLGLSSNIVELDSKCASKSNPSQ*
Ga0099827_102701672	3300009090	Vadose Zone Soil	QLQSAIDTGSFEITEMFDQSMIKKPSVVVKFSTLGLSADIVALESKCASKSNPNQ*
Ga0114129_110093391	3300009147	Populus Rhizosphere	IDLSTLNPQKGLIEKSFDLEPRVLHSAIETGSFEITEMFDQSVIKKPSRVVRFSTLGLSSNIVGPDSKCASRSNPSP*
Ga0075423_103770091	3300009162	Populus Rhizosphere	EKGAAEKSIDLEPRQLQSAIETGSLEITEIFDQSMIKKPSLVARFSTLGLSANVAALESKCAST*
Ga0126384_105254543	3300010046	Tropical Forest Soil	DLTTLSPQKDLVEKSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ*
Ga0126384_109606441	3300010046	Tropical Forest Soil	LQSAIETGSLEIAEMSDQSMIKKPSLVARFSTLGLSANVVALESKCASKSNPNQ*
Ga0126382_103827283	3300010047	Tropical Forest Soil	VEKSLDLEPRQLQSAIETGSFEITENFDQSMIKKPSLVVRFSTSGLSSNIVALESKCASKSNPSQ*
Ga0126373_111446391	3300010048	Tropical Forest Soil	LEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCAKE*
Ga0126373_119192911	3300010048	Tropical Forest Soil	SLIDLTTLRPQKDLVEKSFDLEPRQLQSAIETGNFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ*
Ga0126373_125762841	3300010048	Tropical Forest Soil	EPRQLQSAIETGSFEFTEMFDQSKKPPLVVKFSTLGLSENIVAPKSKCASKSNSNQ*
Ga0126376_120191092	3300010359	Tropical Forest Soil	EKSFDLEPRQLQRAIETGSFEITETFDQSMIKKPSLVVKFSTLGLSANIVALESKCASTQISD*
Ga0126372_110962472	3300010360	Tropical Forest Soil	LDHRQLQSAIGTGSFEITEIFDQSMIKKPSLVVKFSTLGLSANIAVLGSKCASKNNPNQ*
Ga0126378_100465311	3300010361	Tropical Forest Soil	QKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKSSLVVKFSTLGLSANIVALESKCASTQISD*
Ga0126378_101201151	3300010361	Tropical Forest Soil	LIDLTTLKPQKDLIEKSFDLEPRQLQSAIETGSFEIAEMFDQSMLKKPSRVVKFSTLGLSANIVALESKCVSKSTQISD*
Ga0126378_109510601	3300010361	Tropical Forest Soil	QLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVSLESKCASKSNPNQ*
Ga0126378_113017761	3300010361	Tropical Forest Soil	TLNPHKHSVEKSFDLEPRQLQSAIETGSFEFTEMFDQSKKPPFAVKFSTFGLSENIVALKSKCASKRGSPGL*
Ga0126377_129766801	3300010362	Tropical Forest Soil	IETGNFEITEMFDQSMIKTPSRVVRFSTFGLSSNIVALESKCASKRVPGQ*
Ga0126379_107965812	3300010366	Tropical Forest Soil	VDHRSQLQSGIETGIFEITEMFDQSMIKKPSVVVKFSTLGLSADLVALESKCASKSNPNQ
Ga0126379_124030172	3300010366	Tropical Forest Soil	TLNPHKHSVEKSFDLEPRQLQSAIETGSFEFTEMFDQSKKPPFAVKFSTLGLSENIVALKSKCASKRGSPGL*
Ga0126379_125064722	3300010366	Tropical Forest Soil	FDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVSLESKCASKSNPNQ*
Ga0126379_126367891	3300010366	Tropical Forest Soil	TLNPHKHSVEKSFDLEPRQLQSAIETGSFEFTEMFDQTKKPPFAVKFSTFGLSENIVALESKCASKSNPNQ*
Ga0126379_133469912	3300010366	Tropical Forest Soil	LIEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSLVVKFSTLGLSANIVALQSKCVSKNTQISD*
Ga0126381_1007758461	3300010376	Tropical Forest Soil	LEPRQLQSAIETGSFEITEMFNQSMIKKPSRVVKFSTLGLSANIVALESKCASKSTQISD
Ga0126381_1015935192	3300010376	Tropical Forest Soil	LQSAIETGNFEITEMFDQSMIKTPSRVVRFSTFGLSSNIVALESKCASKRVPGQ*
Ga0126383_104782961	3300010398	Tropical Forest Soil	IDLTTLNPHKHSVEKSFDLEPRQLQSAIETGSFEFTEMFDQSEKSPLVVKFSTLGLSENISCTEIKMRLKK*
Ga0126383_109777103	3300010398	Tropical Forest Soil	ETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ*
Ga0126383_111466651	3300010398	Tropical Forest Soil	AIETGSFEITEVFDQSMTKKPSLVARFSTLGLSANVVALESKCASKSNPNQ*
Ga0126383_130113762	3300010398	Tropical Forest Soil	KSIDLEPRQLQSAIEIGSFEITEMFDQSMIKEPSLVVGFSTLGLSAKIVTLESKCVSKE*
Ga0105246_107559012	3300011119	Miscanthus Rhizosphere	AIEIGSFEITEMFDQSVIKKPSLVVRFSTLGLSTNIVALESKCASKSNPNQ*
Ga0137382_104916931	3300012200	Vadose Zone Soil	TLNPQKDLAEKSFDLEPRQLQSAIETGSFEITETFDQSMIKKPPVVVKFSTMGLSANIAALESKCALKNNPNQ*
Ga0137374_104892121	3300012204	Vadose Zone Soil	SFEITEIFDQSMIKKPSLVVRFSTFGLSSNIVALESKCASKSNPSQ*
Ga0137362_102392543	3300012205	Vadose Zone Soil	QKDLIEKSFDLEPRQLQSAIETGSFEITEMFDQLMIKKPSLVVKFSTLGLSANIVALESKCASKSTQISD*
Ga0150985_1103916763	3300012212	Avena Fatua Rhizosphere	GSFEITEVFDQSAIKKPSLVVRFSTLGLSANIVALESKCASKSNPNQ*
Ga0137386_105332621	3300012351	Vadose Zone Soil	IALPTLNSQKNLVEKSFDLEPRQLQSAIETGSFEITEMFDQSLIKKPSLVARFSTLGLSANIVALKSKCASKSNLSQ*
Ga0137371_108514162	3300012356	Vadose Zone Soil	EPRQLQSAIETGSLEITEIFDQSMIKKPSLVARFSTLGLSANVAALESKCAST*
Ga0137385_115245261	3300012359	Vadose Zone Soil	SAIETGSFEITEMFDQSLIKKPSLVARFSTLGANIVALKSKCASKSNLSQ*
Ga0137360_117454441	3300012361	Vadose Zone Soil	IDLTTLNPQKALVEKSFDLEPRQLQSAIETGSFEFTEMFDQSKKPALVVKFSTLGLSENIVALESKCASTQ*
Ga0126369_122622541	3300012971	Tropical Forest Soil	SFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSATVVALESKCASKSNPNQ*
Ga0164308_113885411	3300012985	Soil	LAEKSLDLEPRQLQSAIEIGSFEITEVFDQSAIKKPSLVVRFSTLGLSANIGALESKCAVNQNR*
Ga0157375_110999332	3300013308	Miscanthus Rhizosphere	ELTTLNRQKDVVEKSFDVEPGQLQRAIETGSFEITEMFGQSVIKETSPVARFSTLGLSTNIVALESKCASNSNQNQ*
Ga0132258_108486204	3300015371	Arabidopsis Rhizosphere	FDLEPRQLQSAVEAGSFEFTEVLDESIMKKPSRVVRFSTLGLSSNIVELNSKCASKSNPIQ*
Ga0132258_115905991	3300015371	Arabidopsis Rhizosphere	DRTTLNPQKNSATKSFDLELWQLRSAIEIGSIEITEMFDQSMIKKPSLVARFSTLGLSTSIAALESKCASKSNQNQ*
Ga0182041_117196501	3300016294	Soil	SVEKSFDLEPRQLRSAIETGSFEFTEMLDQSKKPALVVKFSTLGLSENIVALESKCASTQ
Ga0182041_122540651	3300016294	Soil	DLTTLRPEKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0182033_102132623	3300016319	Soil	DLTTLNPQKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSRVVKFSILGLSANIVALESKCASTQVSD
Ga0182033_111429352	3300016319	Soil	FDLEPRQLQSAIETGSFEFTEMLDQSKKPALVVKFSTLGLSENIVALESKCASTQ
Ga0182032_113917572	3300016357	Soil	PHKHSVEKSFDLEPRQLRSAIETGSFEFTEMFDQTKKPPFAVKFSTFGLSENIVALESKCASKSNPNQ
Ga0182040_111137682	3300016387	Soil	LIEKSFDLEPWQLQSAIETGNFEIAEMFEQSMIKKPSLVVRFSTLGLSSNIVALDCASKSNPSQ
Ga0182040_117064521	3300016387	Soil	QLQSAIETGSFEFTEMFDQTKKPPFAVKFSTFGLSENIVALESKCASKSNPNQ
Ga0182037_104492873	3300016404	Soil	QSAIETGSFEFTEMFDQTKKPPFAVKFSTFGLSENIVALESKCASKSNPNQ
Ga0182037_106576332	3300016404	Soil	IDLTTLNPQKDLVEKSFDLEPRQLQRAIETGSFEITETFDQSMIKKPSLVVKFSTLGLSANIAALESKCASTQVSD
Ga0182037_114242242	3300016404	Soil	LVEKSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0182037_121638561	3300016404	Soil	SLIDLTTLRPQKDLVEKSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0182039_100770151	3300016422	Soil	QLQSAIETGSFEFTEMLDQSKKPALVVKFSTLGLSENIVALESKCASTQ
Ga0182039_107500341	3300016422	Soil	PRQLQSAIETGSFEITEMFDQSMIKKSSLVVKFSTLGLSANIVALESKCASTQISD
Ga0182039_112412571	3300016422	Soil	LIDLTTLNPQKDLVERSIDLEPRQLQSAIETGSFEITDMFDQSMTKKPSLVVRFSTLGLSANVVALESKCASTSNPSQ
Ga0182039_117512482	3300016422	Soil	LVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKTPSRVVRFSTFGLSSNIVALESKCASKSNPSQ
Ga0182038_104724053	3300016445	Soil	LEPRQLQSAIETGSFEFTEMLDQSKKPALVVKFSTLGLSENIVALESKCASTQ
Ga0182038_117097632	3300016445	Soil	EKSFDLEPRQLQSAIETGSFEITEMFDQSMIKTPSRVVRFSTLGLSSNIVALESKCASKRIPGE
Ga0182038_117398881	3300016445	Soil	IDLTTLNPQKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKSSLVVKFSTLGLSANIVALESKCASTQISD
Ga0184624_101678643	3300018073	Groundwater Sediment	RQLQSAIEIGSFEITEVFDQSAIKKPSLVVRFSTLGLSANIIALESKCASKSNPNQ
Ga0184624_105142501	3300018073	Groundwater Sediment	EKSFDLEPRQLLSIETGSFEITEMFDQSIIKKPSLVVRFSTLGLSEKVVALESKCASKR
Ga0190268_122296031	3300018466	Soil	GLVEKSFDFEPRVLQSAIEASSFEFTEVFDQSVVKMPSRVVRFSTLGLSSNIVELDSKCASKRNPSQ
Ga0190267_112018611	3300019767	Soil	SFDLEPRQLQSAIEIGSFEITEVFDQSAIKKPSLVVRFSTLGLSANIVALESKCASKSNPNQ
Ga0213878_104910742	3300021444	Bulk Soil	SFDLEPRQLQRAIETGSFEITEMFDQSMIKKPSLVVKFSTLGLSANIAALGSKCASTQSVIEPLIR
Ga0126371_101747181	3300021560	Tropical Forest Soil	PRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0126371_114202991	3300021560	Tropical Forest Soil	SLIDLSTLSIQKNLIEKSFDLEPRQLQSAIETGNFEITEMFDQSMIKTPSRVVRFSTFGLSSNIVALESKCASKRVPGQ
Ga0126371_138234171	3300021560	Tropical Forest Soil	FDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPN
Ga0207663_106642512	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DLTTLNPKKGAAEKSFDLEPRQLQSAIETGSLEITEIFDQSMIKKPSLVARFSTLGLSANVAALDSKCAAT
Ga0209388_11061853	3300027655	Vadose Zone Soil	IETGSFEITEMFDQSMIKKPSLVVKFSTLGLSANIVALESKCASKSTQISD
Ga0209526_104083721	3300028047	Forest Soil	AIATGSFEITEIFDQSITKKPSRAVSFSTVGLSTNSVALEAKCRSKSDPAQ
Ga0209526_104694281	3300028047	Forest Soil	AIATGSFEITEIFDQSITKKPSRAVSFSTVGLSASSVALEAKCRSKSDPAQ
Ga0137415_113070642	3300028536	Vadose Zone Soil	SFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSLVVKFSTLGLSANIVALESKCASKSTQISD
Ga0307503_106101761	3300028802	Soil	ILNPQKDLAAKSFDLELWQLRSAIEIGSFEITEMFDQSVIKKPSTVVRFSTLGLSTNIVALESKCASKRNQNQ
Ga0308309_110166571	3300028906	Soil	TLEPRQLQRAIATGSFEITEIFDQSITKKPSRAVSFSTVGLSTNIVALEAKCRSKSDPAQ
Ga0307497_103853072	3300031226	Soil	KSLAEKSFDLEPRQLQSAIEIGSFEITEVFDQSAIKKPSLIVRFSTLGLSANIVALEPKCAVNPNQ
Ga0170824_1210321283	3300031231	Forest Soil	GSFEITEIFDQSVIKKPSRAVSFSTVGLSTNSVALEAKCRSKSDLAQ
Ga0318541_100214104	3300031545	Soil	SFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0318528_102957791	3300031561	Soil	TLNPQKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSRAVKFSTLGLSSIALESKCASTQMSD
Ga0318573_106198151	3300031564	Soil	TLNPQRDLVEKSFYLEPQQLQRAIETGSFEITEMFDQSMIKKPSRVVNFSTLGLSANIVALESTCASKSTQLSD
Ga0318515_102483703	3300031572	Soil	LQRAIETGSFEITEMFDQSMIKKPSRVVNFSTLGLSANIVALESTCASKSTQLSD
Ga0310915_103736751	3300031573	Soil	LRPEKDLVEKSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0310915_105141843	3300031573	Soil	RSQKDLVEKSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0310915_105861761	3300031573	Soil	DLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTWGLSANVVALESKCASKSNPNQ
Ga0318561_107062131	3300031679	Soil	SQKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0318560_101786591	3300031682	Soil	IDLTTLRPQKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSRVVKFSILGLSANIVALESKCASTQVSD
Ga0306917_101689481	3300031719	Soil	LEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTWGLSANVVALESKCASKSNPNQ
Ga0318493_108147041	3300031723	Soil	VKGKKRHILRSQKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0318501_100643921	3300031736	Soil	DSLIDLTTLNRQKDLVERSIDLEPRQLQSAIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVALESKCTSKSNPNQ
Ga0306918_103051311	3300031744	Soil	ALVEKSFDLEPRQLQSAIETGSFEFTEMLDQSKKPALVVKFSTLGLSENIVALESKCAST
Ga0318502_105910941	3300031747	Soil	LEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTWGLLANVVALESKCASKSNPNQ
Ga0318521_101652921	3300031770	Soil	IVTGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVTLESKCVSKSNPNQ
Ga0318521_106609922	3300031770	Soil	TTLNPQRDLVEKSFYLEPQQLQRAIETGSFEITEMFDQSMIKKPSRVVNFSTLGLSANIVALESTCASKSTQLSD
Ga0318543_103993091	3300031777	Soil	LEPRQLRSAIETGSFEFTEMFDQTKKPPFAVKFSTFGLSENIVALESKCASKSNPNQ
Ga0318566_103743812	3300031779	Soil	AIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0318547_106776131	3300031781	Soil	IDLEPRQLQSAIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVALESKCTSKSNPN
Ga0318552_106423151	3300031782	Soil	LEPQQLQRAIETGSFEITEMFDQSMIKKPSRVVNFSTLGLSANIVALESTCASKSTQLSD
Ga0318548_102495221	3300031793	Soil	EPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTWGLSANVVALESKCASKSNPNQ
Ga0318523_105966381	3300031798	Soil	DVTTLNPQKALVEKSFDLEPRQLQSAIETGSFEIAEMFDQSMIKKPALVVKFSTLGLSENIVALESKCASKSNSNQ
Ga0318568_103508211	3300031819	Soil	KSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0310917_103656531	3300031833	Soil	SIDLEPRQLQSAIETGSFEITEMFDQSMIKKPSVVVKFSTLGLSADIVALESKCASKSNPNQ
Ga0310892_105050141	3300031858	Soil	NSATKSFDLELWQLRSAIEIGSIEITEMFDQSMIKKPSLVARFSTLGLSTSIAALESKCASKSNQNQ
Ga0306919_104222034	3300031879	Soil	TLNPQKDLVEKSFDLEPRQLQRAIETGSFEITEMFDQSMLKKPSRVVKFSTLGLSASIVALESECASKSTQISD
Ga0306919_105534461	3300031879	Soil	PEKDLVEKSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0306925_101564495	3300031890	Soil	TLNPQKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSRVVKFSILGLSANIVALESKCASTQVSD
Ga0306925_112302781	3300031890	Soil	FDLEPWQLQSAIETGSFDIAEMFDQSMIKKPPLVVKFSTLGLSENIVVLESKCASKGSSN
Ga0318536_101842103	3300031893	Soil	LIDLTTLRPQKDLVEKSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTWGLSANVVALESKCASKSNPNQ
Ga0306923_125136142	3300031910	Soil	DLTTLRSQKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0306921_111991541	3300031912	Soil	TTLSPQKDLVEKSFDLEPWQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0306921_126908852	3300031912	Soil	LTTLRSQKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0310916_100168647	3300031942	Soil	PHKHSVEKSFDLEPRQLQSAIETGNFEFTEMFDQTKKPPFAVKFSTFGLSENIVALESKCASKSNPNQ
Ga0310913_103652381	3300031945	Soil	QLQSAIETGNFEFTEMFDQTKKPPFAVKFSTFGLSENIVALESKCASKSNPNQ
Ga0310913_109629931	3300031945	Soil	NPQKALVETSFDLEPRQLQSAIETGSFEFTEMLDQSKKPALVVKFSTLGLSENIVALESKCASTQ
Ga0310910_100491321	3300031946	Soil	KSFDLEPRQLQSAIETGSFEFTEMFDQSKKSPLVVKFSTLGLSENIVALKSKCASKSNSN
Ga0310910_106082281	3300031946	Soil	PTLVDAAQPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0310910_113299161	3300031946	Soil	AIETGSFEITEMLDQSMIKKSSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0310909_108637031	3300031947	Soil	SAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0306926_102914643	3300031954	Soil	TLNLQKNLMEKSVDLEPRQLQSAIETGSFEITEMFDQSMIKTPSRVVRFSTFGLSSNIVALESKCASKSNPSQ
Ga0306926_103456194	3300031954	Soil	DLVEKSFYLEPQQLQRAIETGSFEITEMFDQSMIKKPSRVVNFSTLGLSANIVALESTCASKSTQLSD
Ga0306926_109768242	3300031954	Soil	LIDLTTLSPQKGLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0306922_107401611	3300032001	Soil	QLQSAIETGSFEFTEMFDQLKKPSLVVRFSTFGLSENIVALESKCASKSNSNQ
Ga0306922_123797872	3300032001	Soil	LEPRQLQSAIETGIFEITEMFDQSMIKKPSVVVKFSTLGLSADLVALESKCASRSNPNQ
Ga0318569_100177045	3300032010	Soil	TTLKPQKDLIEKSFDLEPRQLQSAIETGSFEFTEMFDQSKKSPLVVKFSTLGLSENIVALKSKCASKSNSNQ
Ga0318507_100099255	3300032025	Soil	QLQSAIETGSFEFTEMFDQSKKSPLVVKFSTLGLSENIVALKSKCASKSNSNQ
Ga0310911_100382154	3300032035	Soil	LTTLRPQKDLVEKSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0318559_102880701	3300032039	Soil	LNLQKDLVEKSFDLEPQQLQSAIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVTLESKCVSKSNPNQ
Ga0318549_103816861	3300032041	Soil	LQKDLVEKSFDLEPQQLQSAIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVTLESKCVSKSNPNQ
Ga0318556_104111761	3300032043	Soil	PRQLQSAIETGSFEITEMFDQSMIKKPSRVVNFSTLGLSANIVALESTCASKSTQLSD
Ga0318532_101491802	3300032051	Soil	SFEITEMFDQSMIKKPSLVVRFSTLGLSANVVTLESKCVSKSNPNQ
Ga0318506_100364124	3300032052	Soil	LNPQRDLVEKSFYLEPQLQRAIETGSFEITEMFDQSMIKKPSRVVNFSTLGLSANIVALESTCASKSTQLSD
Ga0318506_102240271	3300032052	Soil	AIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0318533_101166363	3300032059	Soil	LNPQKALVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSRAVKFSTLGLSSIALESKCASTQMSD
Ga0318533_110494571	3300032059	Soil	TTLNPEKGVDVAEKSFDLDHRQLQSAIGTGSFEITEIFDQSMIEKPSFVVKFSTLGLSANIAALESKCASKNSQN
Ga0318505_103892022	3300032060	Soil	SFDLEPWQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0306924_102179721	3300032076	Soil	VIDLTTLNPQKALVEKSFDLEPRRLQSAIETGSFEITEMFDQSMIKKPSRAVKFSTLGLSSIALESKCASTQMSD
Ga0318518_102531911	3300032090	Soil	TTLRSQKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0318577_105328852	3300032091	Soil	VEKSFYLEPQQLQRAIETGSFEITEMFDQSMIKKPSRVVNFSTLGLSANIVALESTCASKSTQLSD
Ga0318540_100882654	3300032094	Soil	DSLIDLTTLRPEKDLVEKSFDLEPRQLQSAIETGSFEITEMFDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0306920_1017009371	3300032261	Soil	DLEPRQLQSAIETGSFEFTEMFDQSKKPPVVVKFSTLGLLENIIALKSKCASKSNSNQ
Ga0306920_1017055581	3300032261	Soil	TLSPQKDLVEKSFDLEPWQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTLGLSANVVALESKCASKSNPNQ
Ga0306920_1017547071	3300032261	Soil	DLVEKSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTWGLLANVVALESKCASKSNPNQ
Ga0306920_1030856941	3300032261	Soil	IDLTTLSPQKELVEKSFDLEPRQLQSAIETGIFEITEMFDQSMIKKPSVVVKFSTLGLSADLVALESKCASRSNPNQ
Ga0310914_107097961	3300033289	Soil	DLVEKSFDLEPRQLQSAIETGSFEITEMLDQSMIKKPSLVVRFSTWGLSANVVALESKCASKSNPNQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036444

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences