NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F036701

Metagenome / Metatranscriptome Family F036701

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F036701
Family Type Metagenome / Metatranscriptome
Number of Sequences 169
Average Sequence Length 63 residues
Representative Sequence MDGLTILTIWVLLSFPIVRHVNKRMEETDDELRFKTSFQLVLFVRAQFEVPRFYLNKIAKLLIR
Number of Associated Samples 103
Number of Associated Scaffolds 169

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.78 %
% of genes near scaffold ends (potentially truncated) 36.69 %
% of genes from short scaffolds (< 2000 bps) 79.29 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (71.006 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(28.402 % of family members)
Environment Ontology (ENVO) Unclassified
(59.172 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(71.006 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86
12199950652
2RCM31_100708972
3GOS2236_10894873
4B570J29032_1087950452
5B570J29032_1095071673
6B570J29032_1097114212
7B570J29032_1098374855
8B570J40625_10003074711
9B570J40625_1002523722
10B570J40625_1004939753
11B570J40625_1005990921
12B570J40625_1010308802
13B570J40625_1015232341
14B570J40625_1016001212
15JGI25908J49247_100041722
16JGI25908J49247_101419762
17JGI25908J49247_101456432
18JGI25910J50241_100073033
19JGI25920J50251_1000158612
20JGI25920J50251_100610792
21JGI25922J50271_100064055
22JGI25922J50271_100788131
23JGI25922J50271_100929482
24JGI25922J50271_101204101
25JGI25921J50272_100092407
26JGI25921J50272_101092781
27JGI25919J51413_10208931
28JGI25930J51415_10658802
29Ga0063232_102758941
30Ga0065166_101249431
31Ga0065166_102395912
32Ga0065166_103154592
33Ga0066179_101186463
34Ga0007787_100916065
35Ga0007787_101015755
36Ga0007787_106772342
37Ga0070374_104045891
38Ga0070374_106186242
39Ga0068876_101122452
40Ga0068872_106077592
41Ga0078894_101283646
42Ga0078894_102966612
43Ga0078894_103990302
44Ga0078894_104831333
45Ga0078894_105217642
46Ga0078894_105443994
47Ga0078894_107201222
48Ga0079957_10180859
49Ga0079957_10319985
50Ga0079957_11338852
51Ga0070744_100090547
52Ga0070744_100231862
53Ga0102874_11612711
54Ga0102875_11902462
55Ga0102918_10918452
56Ga0102923_12224371
57Ga0102897_12170212
58Ga0102896_11764431
59Ga0102870_11032593
60Ga0114340_100206216
61Ga0114340_10248253
62Ga0114340_10411623
63Ga0114340_10600425
64Ga0114340_10823892
65Ga0114340_11632211
66Ga0114340_11955652
67Ga0114341_100202739
68Ga0114341_1003118610
69Ga0114341_100337517
70Ga0114341_100374311
71Ga0114341_101566663
72Ga0114341_101867444
73Ga0114341_103026922
74Ga0114344_11021562
75Ga0114346_10752842
76Ga0114346_11330502
77Ga0114346_13032702
78Ga0114347_12306311
79Ga0114350_11129374
80Ga0114354_11617962
81Ga0114336_10837691
82Ga0114336_12796942
83Ga0114337_10284417
84Ga0114337_11977273
85Ga0104242_10761402
86Ga0102811_12411822
87Ga0102829_10790221
88Ga0114980_102652013
89Ga0102883_12019992
90Ga0129333_100778353
91Ga0129336_103584731
92Ga0153801_10541573
93Ga0164293_101905842
94Ga0164293_108473972
95Ga0164293_108563472
96Ga0164292_109232801
97Ga0172367_101155064
98Ga0172373_1002909912
99Ga0172372_100861046
100Ga0181356_10122727
101Ga0181343_12298622
102Ga0181343_12316482
103Ga0181349_11355351
104Ga0181346_11020611
105Ga0211732_14192312
106Ga0211732_15892792
107Ga0211736_102261022
108Ga0211736_106310264
109Ga0211726_103697009
110Ga0208090_10489262
111Ga0208234_10021634
112Ga0208232_10179282
113Ga0208596_10380403
114Ga0208595_10173992
115Ga0208082_10770651
116Ga0214163_10752942
117Ga0222714_100299153
118Ga0222714_100525056
119Ga0222714_101263552
120Ga0222714_101652602
121Ga0222714_104053121
122Ga0222713_108438392
123Ga0222712_100622797
124Ga0222712_100627115
125Ga0181351_10704294
126Ga0255147_10002513
127Ga0255147_10004498
128Ga0244777_106188942
129Ga0244776_101445852
130Ga0244776_105551172
131Ga0255164_10447412
132Ga0255160_10698392
133Ga0255166_10681692
134Ga0208024_10942262
135Ga0255131_10406762
136Ga0255135_10472602
137Ga0255154_11276911
138Ga0209033_11962592
139Ga0209443_11501963
140Ga0209355_11386574
141Ga0209770_101052101
142Ga0209768_101256384
143Ga0209358_100356511
144Ga0209358_100973841
145Ga0209358_102034601
146Ga0209550_105791022
147Ga0255174_10534412
148Ga0315899_115904202
149Ga0315909_100608952
150Ga0315909_104134351
151Ga0315909_108416522
152Ga0315904_110329292
153Ga0315904_110629851
154Ga0315905_104945444
155Ga0315902_110850752
156Ga0315903_104487521
157Ga0315903_105641811
158Ga0334996_0089011_106_300
159Ga0334979_0080754_1688_1882
160Ga0334985_0229138_331_525
161Ga0334985_0501562_512_697
162Ga0335029_0173084_3_197
163Ga0335031_0188797_2_169
164Ga0335031_0763144_198_392
165Ga0335035_0503490_1_192
166Ga0335036_0876058_333_512
167Ga0335055_0383983_217_411
168Ga0335060_0544970_432_590
169Ga0335017_0401217_562_741
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 60.87%    β-sheet: 0.00%    Coil/Unstructured: 39.13%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045505560MDGLTILTIWVLLSFPIVRHVNKRMEETDDELRFKTSFQLVLFVRAQFEVPRFYLNKIAKLLIRSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
29.0%71.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds



Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater
Freshwater
Freshwater Lake
Freshwater
Freshwater, Plankton
Freshwater Lake
Freshwater
Lake
Marine Plankton
Freshwater
Freshwater
Freshwater To Marine Saline Gradient
Marine
Estuarine
Estuarine
Estuarine Water
8.9%28.4%11.2%14.8%4.1%5.9%5.3%8.3%4.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
21999506522199352004FreshwaterMDTLTFISIWILLSFPIVRHVNTKMEEANDMHRFKIAFQFVLFIRAQFEVPKWYLIQLTKLLSK
RCM31_1007089723300001851Marine PlanktonMDGLTILLIWILLSFPIVRMVNRRMEENKDDTRFETWFQVYLFFRAQIEVPKYYLFQLIKLLK*
GOS2236_108948733300001968MarineMDGLTFGLIWVLLSYPIVRMVNERMEEREDETRFQTWFQVYLFIRAQFEVPRYYFFKLIKLIK*
B570J29032_10879504523300002408FreshwaterMDGLTILTIWILLSFPIVRHVNKRMEEHDDDLRFRTSFQLVLFVRAQFEVPRFYFDKITKLLFR*
B570J29032_10950716733300002408FreshwaterGLTILAIWVLLSFPIVRHVNKRMEESDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG*
B570J29032_10971142123300002408FreshwaterMDGLTILLVWILLSFPIVRHVNRKMEETDDELRYKTSFQLVLFIRAQFEVPKWYLIQLTKLLK*
B570J29032_10983748553300002408FreshwaterMDGLTILAIWVLLSFPIVRHVNKRMEESDDELRFRTAFQLILFVRAQFEVPRFYLYKIAKLLIR*
B570J40625_100030747113300002835FreshwaterMDTLTFISIWILLSFPIVRHVNTKMEEANDMHRFKIAFQFVLFIRAQFEVPKWYLIQLTKLLSK*
B570J40625_10025237223300002835FreshwaterMDGLTILAIWVLLSFPIVRHVNKRMEESDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG*
B570J40625_10049397533300002835FreshwaterMDGLTILLVWILLSFPIVRHVNRKMEETDDELRYKTSFQLVLFIRAQFEVPKWYLIQLTKLL
B570J40625_10059909213300002835FreshwaterGLTILAIWVLLSFPIVRHVNKRMEESDDELRFRTAFQLILFVRAQFEVPRFYLYKIAKLLIR*
B570J40625_10103088023300002835FreshwaterMDGLTILLFWILLSFPIVRHVNKKMEQLDDELRFKTSFQLVLFIRAQFEVPKWYFIQLTKLLSK*
B570J40625_10152323413300002835FreshwaterMDGLTILLIWILLSFPIVRHVNRRMEETEDDLRFRTSFQLILFIRAQFEVPKWYLLRLIKLLK*
B570J40625_10160012123300002835FreshwaterMDGLTILAIWILLSFPIVRHVNTKMEEANDNQRFKLAFQFALFIRAQFEVPKWYLIQLTKFLSK*
JGI25908J49247_1000417223300003277Freshwater LakeMDTLTFISIWILLSFPIVRHVNTKMEEADDNQRFKLAFQFALFIXAQXEVPXWYLIQLTKLLSK*
JGI25908J49247_1014197623300003277Freshwater LakeMNELTILAIWILLSFPIVRHVNKRMEETDDELRYSTSFQLVLFVRAQFEVPRFYLYKIAKLMSR*
JGI25908J49247_1014564323300003277Freshwater LakeMDGLTILAIWVLLSFPIVRHVNKRMEETDDELRYKTTFQLVLFVRAQFEVPRFYLYXIAKLIAR*
JGI25910J50241_1000730333300003388Freshwater LakeMDTLTFISIWILLSFPIVRHVNTKMEEADDNQRFKLAFQFALFIRAQFEVPKWYLIQLTKLLSK*
JGI25920J50251_10001586123300003404Freshwater LakeMDTLTFISIWILLSFPIVRHVNTKMEEADDNQRFKLAFQFALFIXAQFEVPXWYLIQLTKLLSK*
JGI25920J50251_1006107923300003404Freshwater LakeMDGLTILAIWVLLSFPIVRHVNKRMEETDDELRYKTTFQLVLFVRAQFEVPRFYLYKIAKLIAR*
JGI25922J50271_1000640553300003413Freshwater LakeMDIVTFITIWVLLSFPIVRHVNKRMEEKNDDVRFETNFQLLLFLRAQFEVPRFYFINLINLLITKRK*
JGI25922J50271_1007881313300003413Freshwater LakeMDGLTILLVWILLSFPIVRHVNRKMEETDDELRYKTSFQLVLFIRAQFEVPKWYLIQLTKLLX*
JGI25922J50271_1009294823300003413Freshwater LakeTIWILLSFPIVRHVNKRMEEHDDELRFKTSFQLVLFVRAQFEVPRFYLNKIAKLLIR*
JGI25922J50271_1012041013300003413Freshwater LakeMDGLTILAIWVLLSFPIVRHVNKRMEEVDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKXITG*
JGI25921J50272_1000924073300003430Freshwater LakeMDGLTILLVWILSSFPIVRHVNRRMEETNDELRFRTSFQLVLFIRAQFEVPKWYLIQLTKLLK*
JGI25921J50272_1010927813300003430Freshwater LakeMDGLTILTIWILLSFPIVRHVNKRMEEHDDELRFKTSFQLVLFVRAQFEVPRFYLNKIAKLLIR*
JGI25919J51413_102089313300003488Freshwater LakeMDTLTFISIWILLSFPIVRHVNTKMEEADDNQRFKLAFQFALFIRAQFEVPKWYLIQLTK
JGI25930J51415_106588023300003499Freshwater LakeVLLSYPIVRMVNRRMEETDDDLRFRTSFQLILFIRAQFEVPKWYLLRLIKLLK*
Ga0063232_1027589413300004054Freshwater LakeDTLTFISIWILLSFPIVRHVNTKMEEADDNQRFKLAFQFALFIRAQFEVPKWYLIQLTKLLSK*
Ga0065166_1012494313300004112Freshwater LakeMDGLTILLVWILSSFPIVRHVNRRMEETNDELRFRTSFQLVLFIRAQFEVPKWYL
Ga0065166_1023959123300004112Freshwater LakeMDGLTILTIWVLLSFPIVRHVNKRMEEVDDELRFRTSFQLVLFVRAQFEVPKFYLNKIAKLLIG*
Ga0065166_1031545923300004112Freshwater LakeMDGLTFILIWVLLSYPIVRMVNRRMEETDDDLRFRTSFQLILFIRAQFEVPKWYLLRLIKLLK*
Ga0066179_1011864633300004126Freshwater LakeLLSFPIVRHVNKRMEETDDELRYKTTFQLVLFVRAQFEVPRFYLYKIAKLIAR*
Ga0007787_1009160653300004240Freshwater LakeIDMDGLTFILIWVLLSYPIVRHVNRRMEETDDDLRFRTSFQLVLFIRAQFEVPKWYLIQLTKLLSK*
Ga0007787_1010157553300004240Freshwater LakeIDMDGLTFILIWVLLSYPIVRMVNRRMEETDDDLRFRTSFQLILFIRAQFEVPKWYLLRLIKLLK*
Ga0007787_1067723423300004240Freshwater LakeMDGLTIITIWILLSFPIVRHVNKRMEELNDELRFNTTFQLVLFFRAQFEVPKFYFYKIAKLISR*
Ga0070374_1040458913300005517Freshwater LakeIWVLLSFPIVRHVNKRMEETDDELRYKTTFQLVLFVRAQFEVPRFYLYKIAKLIAR*
Ga0070374_1061862423300005517Freshwater LakeMDGLTILLVWILLSFPIVRHVNRKMEETDDELRYKTSFQLVLFIRAQFEVPKWYLIQLTKLLR*
Ga0068876_1011224523300005527Freshwater LakeMDGLTILLVWVLLSFPIVRHVNRRMEETDDVLRFKTSFQLVLFIRAQFEVPKWYLIQLTKLLSK*
Ga0068872_1060775923300005528Freshwater LakeGLTILLIWILLSFPIVRHVNRRMEETEDDLRFRTSFQLILFIRAQFEVPKWYLLRLIKLLK*
Ga0078894_1012836463300005662Freshwater LakeTILAIWVLLSFPIVRHVNKRMEELNDELRFRTTFQLILFVRAQFEVPRFYLYKIAKLLIR
Ga0078894_1029666123300005662Freshwater LakeMDGLTILAIWVLLSFPIVRHVNKRMEEVDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG*
Ga0078894_1039903023300005662Freshwater LakeMDIISFILIWILSSFPIVRMVNRRMEELNDELRFKTTFQIILFIRAQFEVPKWYFNQLAKLFIK*
Ga0078894_1048313333300005662Freshwater LakeMDGLTITLLWILSSFPIVRHVNRRMEETNDELRHRTSFQLVLFIRAQLEVPRWYLNKLAKLIVK*
Ga0078894_1052176423300005662Freshwater LakeMNTLTFVAIWILLSFPIAKHVITKMEEANDNQRFKIGFQLALFIRAQFEVPRWYLIQLTKLLSK*
Ga0078894_1054439943300005662Freshwater LakeLLSFPIVRHVNKRMEENDDELRFRTSFQLVLFVRAQLEVPRFYFDKITKLLFR*
Ga0078894_1072012223300005662Freshwater LakeMDGLTILAIWVLLSFPIVRHVNKRMEEMDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG*
Ga0079957_101808593300005805LakeMDLLTILLVWVLLSYPIVRHVNTKMEEANDTQRFRVAFQLVLFIRAQFEVPKWYFIQLTKLLSK*
Ga0079957_103199853300005805LakeMDGLTILTIWVLLSFPIVRHVNKRMEENDDSLRFRTSFQLVLFVRAQFEVPRFYFDKITKLLFR*
Ga0079957_113388523300005805LakeMDALTFLGVWILSSFPIVKHVNKKMEESNDDLRFKTSFQLVLFIRAQFEVPKWYLIQLTKLIR*
Ga0070744_1000905473300006484EstuarineMDGLTILAIWVLLSFPIVRHVNKRMEETDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG*
Ga0070744_1002318623300006484EstuarineMDTLTFISIWILLSFPIVRHVNTKMEEADDNQRFKMAFQLALFIRAQFEVPKWYLIQLTKLLSK*
Ga0102874_116127113300007546EstuarineMDIVTFITIWVLLSFPIVRHVNKRMEEKNDDVRFETNFQLLLFLRAQFEVPKFYFINLMNLLITKRK*
Ga0102875_119024623300007547EstuarineMDGLTILAIWVLLSFPIVRHVNKRMDETDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG*
Ga0102918_109184523300007593EstuarineMDTLTFISIWILLSFPIVRHVNTKMEEADDNQRFKLAFQFALFIRAQFEVPKWYLIQLTKLLS
Ga0102923_122243713300007606EstuarineIWILLSFPIVRHVNTKMEEADDNQRFKLAFQFALFIRAQFEVPKWYLIQLTKLLSK*
Ga0102897_121702123300007617EstuarineMDELTILAIWVLLSFPIVRHVNKRMEETDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG*
Ga0102896_117644313300007618EstuarineMDGLTILAIWVLLSFPIVRHVNKRMEETDDELRYRTSFQLVLFVRAQFEVTRFYLYKIAKLITG*
Ga0102870_110325933300007625EstuarineMDGLTILAIWVLLSFPIVRHVNKRMEETDDELRYRTSFQLVLFVRAQFEVPKFYLYKIAKLITG*
Ga0114340_1002062163300008107Freshwater, PlanktonMDGLSILLLWVLSSFPIVRHVNKRMEELDDELRFRTSFQVILFIRAQFEVPKYYLMQLTKLLSK*
Ga0114340_102482533300008107Freshwater, PlanktonMDGLTILLVWILLSFPIVRHVNRKMEETDDVLRFKTSFQLVLFIRAQFEVPKWYLIQLTKLLSK*
Ga0114340_104116233300008107Freshwater, PlanktonMDGLTILLVWILSSFPIVRHVNRRMEETNDDLRFKTSFQLVLFIRAQFEVPKWYLIQLTKLLSK*
Ga0114340_106004253300008107Freshwater, PlanktonMDGLTILSIWVLLSFPIVRHVNKRMEELDDELRFRTSFQLILFVRAQFEVPRFYLNKIAKLLIR*
Ga0114340_108238923300008107Freshwater, PlanktonMDALSILTIWILLSFPIVRHVNKRMEEMQDELRFRTSFQLILFIRAQFEVPRFYLNKIAKLLIR*
Ga0114340_116322113300008107Freshwater, PlanktonMDGLTILTIWVLLSFPIVRHVNKRMEENDDELRFRTSFQLVLFVRAQFEVPRFYFDKITKLLFR*
Ga0114340_119556523300008107Freshwater, PlanktonMDGLTILAIWVLLSFPIVRHVNKRMEETEDDLRYSTSFQLVLFVRAQFEVPRFYLYKIAKLITG*
Ga0114341_1002027393300008108Freshwater, PlanktonMDGITIILVWILLSYPIVRMVNRRMEELNDDTRFRTWFQVFLFIRAQFEVPRYYFSKLINLIK*
Ga0114341_10031186103300008108Freshwater, PlanktonMSMDGLTILAIWILLSFPIVRHVNTKMEEANDNQRFKLAFQFALFIRAQFEVPKWYLIQLTKFLSK*
Ga0114341_1003375173300008108Freshwater, PlanktonMDGLTILLVWILSSFPIVRHVNRRMEETDDELRYKTSFQLVLFIRAQFEVPKWYLIQLTKLLR*
Ga0114341_1003743113300008108Freshwater, PlanktonMDGLTFILIWVLLSYPIVRHVNRRMEETDDDLRFRTSFQLVLFIRAQFEVPKWYLIQLTKLLSK*
Ga0114341_1015666633300008108Freshwater, PlanktonMDGLTILSIWVLLSFPIVRHVNKRMEELDDELRFRTSFQLVLFVRAQFEVPRFYLNKIAKLLIR*
Ga0114341_1018674443300008108Freshwater, PlanktonMDGFSIALIWLLLSFPIVRHVNKRMEELDDELRFKTSFQLVLFIRAQFEVPKYYLIQLTKLLSK*
Ga0114341_1030269223300008108Freshwater, PlanktonMDGLTLIMVWVLLSFPIVRHVNRRMEETDDVLRFKTSFQLVLFIRAQFEVPKWYLIQLTKLLSK*
Ga0114344_110215623300008111Freshwater, PlanktonMDGLTILTIWVLLSFPIVRHVNKRMEELDDELRFRTSFQLVLFIRAQFEVPKFYLNKIAKLITG*
Ga0114346_107528423300008113Freshwater, PlanktonMSMDGLTILAIWILLSFPIVRHVNTKMEEANDNQRFKLAFQFALFIRAQFEVPKWYLIQLTKFLSKRKKRN*
Ga0114346_113305023300008113Freshwater, PlanktonMDGLTILTIWVLLSFPIVRHVNKRMEETEDDLRFRTSFQLVLFVRAQFEVPRFYLNKIAKLLIR*
Ga0114346_130327023300008113Freshwater, PlanktonMDGLTILSIWVLLSFPIVRHVNKRMEELDDELRFRTSFQLVLFIRAQFEVPRFYLNKIAKLLIR*
Ga0114347_123063113300008114Freshwater, PlanktonMDGLTILSIWVLLSFPIVRHVNKRMEETEDDLRYSTSFQLVLFVRAQFEVPRFY
Ga0114350_111293743300008116Freshwater, PlanktonISMDGLTILLFWILLSFPIVRHVNKKMEQLDDELRFKTSFQLVLFIRAQFEVPKWYFIQLTKLLSK*
Ga0114354_116179623300008119Freshwater, PlanktonMDGLTILTIWVLLSFPIVRHVNKRMEEVDDELRYRTSFQLVLFVRAQFEVPRFYLNKIAKLLIR*
Ga0114336_108376913300008261Freshwater, PlanktonVLLSFPIVRHVNKRMEETEDDLRYSTSFQLVLFVRAQFEVPRFYLYKIAKLITG*
Ga0114336_127969423300008261Freshwater, PlanktonMDGLTILTIWVLLSFPIVRHVNKRMEEVDDELRFRTSFQLVLFVRAQFEVPKFYLNKIAK
Ga0114337_102844173300008262Freshwater, PlanktonMDGLTILLVWILSSFPIVRHVNRRMEETDDELRYKTSFQLVLFIRAQFEVPKWYLIQLTKLLK*
Ga0114337_119772733300008262Freshwater, PlanktonMDGLTFLLIWILLSFPIVRHVNRRMEETEDTLRFRTDFQLILFIRAQFEVPKWYLVRLIKLLK*
Ga0104242_107614023300008962FreshwaterMDGLTFILVWILLSFPIVRMVNRRMEENDDKVRFVTAFQIFLFVRAQFEVPRYYLVQLIKLLK*
Ga0102811_124118223300009024EstuarineMDGLTILAIWVLLSFPIVRHVNKRMEEKNDDVRFETNFQLLLFLRAQFEVPKFYFI
Ga0102829_107902213300009026EstuarineIFIGMDTLTFISIWILLSFPIVRHVNTKMEEADDNQRFKMAFQLALFIRAQFEVPKWYLIQLTKLLSK*
Ga0114980_1026520133300009152Freshwater LakeGMDTLTFISIWILLSFPIVRHVNTKMEEADDNQRFKLAFQFALFIRAQFEVPKWYLIQLTKLLSK*
Ga0102883_120199923300010312EstuarineMDGFTILAIWVLLSFPIVRHVNKRMEETEDDLRYSTSFQLVLFIRAQFEVPKFYLYKIAKLISR*
Ga0129333_1007783533300010354Freshwater To Marine Saline GradientMDGLTLLLIWFLLSYPIVRHVNKRMEETDDDLRFRTSFQLVLFIRAQFEVPKYYFMKLTKLFVK*
Ga0129336_1035847313300010370Freshwater To Marine Saline GradientIFIGMGGVTIGLVWILLSYPIVRMVNRRMEELNDDTRFRTWFQVFLFIRAQFEVPRYYFSKLINLIK*
Ga0153801_105415733300012017FreshwaterFIGMDGLTILTIWVLLSFPIVRHVNKRMEETDDELRYKTTFQLVLFVRAQFEVPRFYLYKIAKLIAR*
Ga0164293_1019058423300013004FreshwaterMDGLTILTIWVLLSFPIVRHVNKRMEENDDELRFRTSFQLVLFVRAQLEVPRFYFDKITKLLFR*
Ga0164293_1084739723300013004FreshwaterMDGLTILAIWVLLSFPIVRHVNKRMEETEDELRYSTSFQLVLFVRAQFEVPRFYLYKIAKLITG*
Ga0164293_1085634723300013004FreshwaterMDTLTFISIWILLSFPIVRHVNTKMEEANDMHRFKIAFQFVLFIRAQFEVPKWYLI
Ga0164292_1092328013300013005FreshwaterMDGLTILLFWILLSFPIVRHVNKKMEQLDDELRFKTSFQLVLFIRAQFEVPKWYFIQLTK
(restricted) Ga0172367_1011550643300013126FreshwaterMDGLTFIGIWVLSSFPIVKHVNKKMEESNDELRFKTSFQLVLLIRAQFEVPKWYLIQLTKLIR*
(restricted) Ga0172373_10029099123300013131FreshwaterMDGLNIFLLWILLSFPIVRHVNKRMEETDDELRFRTSFQLILFIRAQLEVPRWYFTKLTKLLSK*
(restricted) Ga0172372_1008610463300013132FreshwaterMDGLSIFLLWILLSFPIVRHVNKRMEETDDELRFRTSFQIILFIRAQLEVPRWYFSKLTKLLK*
Ga0181356_101227273300017761Freshwater LakeLTFISIWILLSFPIVRHVNTKMEEADDNQRFKLAFQFALFIRAQFEVPKWYLIQLTKLLS
Ga0181343_122986223300017766Freshwater LakeESISQRVSKGIQQIFIGMDGLTILAIWVLLSFPIVRHVNKRMEEVDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG
Ga0181343_123164823300017766Freshwater LakeSQRVSKGIQQIFIGMDGLTILTIWILLSFPIVRHVNKRMEEHDDELRFKTSFQLVLFVRAQFEVPRFYLNKIAKLLIR
Ga0181349_113553513300017778Freshwater LakeMNELTILAIWILLSFPIVRHVNKRMEETDDELRYSTSFQLVLFVRAQFEVPR
Ga0181346_110206113300017780Freshwater LakeAIWVLLSFPIVRHVNKRMEETDDELRYSTSFQLVLFVRAQFEVPRFYLYKIAKLMSR
Ga0211732_141923123300020141FreshwaterMDGLTILTIWILLSFPIVRHVNKRMEEHDDDLRFRTSFQLVLFVRAQFEVPRFYLNKIAKLLIR
Ga0211732_158927923300020141FreshwaterMDTLTFIAIWVLLSFPIARHVITKMEEANDTQRFKIGFQLALFIRAQFEVPKWYLIQLTKLLSK
Ga0211736_1022610223300020151FreshwaterMDGLTILSIWVLLSFPIVRHVNKRMEEVDDELRFRTSFQLVLFVRAQFEVPRFYLNKIAKLLIG
Ga0211736_1063102643300020151FreshwaterMDGLTILLVWILLSFPIVRHVNRKMEETDDGLRFKTSFQLVLFIRAQFEVPKWYLIQLTKLLSK
Ga0211726_1036970093300020161FreshwaterMDGLTILLFWILLSFPIVRHVNKKMEQLDDELRFKTSFQLVLFIRAQFEVPKWYFIQLTKLLSK
Ga0208090_104892623300020513FreshwaterMDTLTFIAIWILLSFPIVRHVNTKMEEANDMHRFKIAFQFVLFIRAQFEVPKWYLIQLTKLLSK
Ga0208234_100216343300020515FreshwaterMDGLTILTIWVLLSFPIVRHVNKRMEETDDELRFKTSFQLVLFVRAQFEVPRFYLNKIAKLLIR
Ga0208232_101792823300020527FreshwaterMDGLTILTIWVLLSFPIVRHVNKRMEENDDELRFRTSFQLVLFVRAQLEVPRFYFDKITKLLFR
Ga0208596_103804033300020534FreshwaterLLSFPIVRHVNKRMEESDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG
Ga0208595_101739923300020538FreshwaterMDGLTILAIWVLLSFPIVRHVNKRMEESDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG
Ga0208082_107706513300020563FreshwaterMDGLTILTIWVLLSFPIVRHVNKRMEENDDELRFRTSFQLVLFVRAQLEVPRFYF
Ga0214163_107529423300021141FreshwaterMDGLTILAIWVLLSFPIVRHVNKRMEEVDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG
Ga0222714_1002991533300021961Estuarine WaterMDGLTILAIWILLSFPIVRHVNTKMEEANDNQRFKLAFQFALFIRAQFEVPKWYLIQLTKFLSK
Ga0222714_1005250563300021961Estuarine WaterMDGLTFLLIWILLSFPIVRHVNRRMEETEDTLRFRTDFQLILFIRAQFEVPKWYLVRLIKLLK
Ga0222714_1012635523300021961Estuarine WaterMDGLTILAIWVLLSFPIVRHVNKRMEETDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG
Ga0222714_1016526023300021961Estuarine WaterMDLLTILLVWVLLSYPIVRHVNTKMEEANDTQRFRVAFQLVLFIRAQFEVPKWYFIQLTKLLSK
Ga0222714_1040531213300021961Estuarine WaterMDGLTFVLIWVLSSYPIVRHVNRRMEELNDELRFRTSFQLVLFIRAQFEVPKWYLIKLTKLLSK
Ga0222713_1084383923300021962Estuarine WaterMDLLTILLIWVLLSYPIVRHVNTKMEEANDTQRFRVAFQLVLFIRAQFEVPKWYFIQLTKLLSK
Ga0222712_1006227973300021963Estuarine WaterMDGLTILLVWILLSFPIVRHVNRKMEETDDELRYKTSFQLVLFIRAQFEVPKWYLIQLTKLLR
Ga0222712_1006271153300021963Estuarine WaterMDGLTILLVWILLSFPIVRHVNRKMEETDDVLRFKTSFQLVLFIRAQFEVPKWYLIQLTKLLSK
Ga0181351_107042943300022407Freshwater LakeMNELTILAIWILLSFPIVRHVNKRMEETDDELRYSTSFQLVLFVRAQFEVPRFYLYKIAKLMSR
Ga0255147_100025133300024289FreshwaterMDGLTFGLIWVLLSFPIVRHVNRKMEETDDELRFRTSFQLVLFIRAQFEVPKWYLIQLTKLLSK
Ga0255147_100044983300024289FreshwaterMDGLTFILVWILLSFPIVRMVNRRMEENDDKVRFVTAFQIFLFVRAQFEVPRYYLVQLIKLLK
Ga0244777_1061889423300024343EstuarineMDTLTFISIWILLSFPIVRHVNTKMEEADDNQRFNLAFQFALFIRAQFEVPKWYLIQLTKLLSK
Ga0244776_1014458523300024348EstuarineMNTLTFVAIWILLSFPIAKHVITKMEEANDNQRFKIGFQLALFIRAQFEVPRWYLIQLTKLLSK
Ga0244776_1055511723300024348EstuarineMDIVTFITIWVLLSFPIVRHVNKRMEEKNDDVRFETNFQLLLFLRAQFEVPKFYFINLMNLLITKRK
Ga0255164_104474123300024495FreshwaterMDGLTIILLWILLSFPIVRMVNRKMEQNNEDTRFKTGFQIYLFIRAQFEVPRYYLF
Ga0255160_106983923300026457FreshwaterTIKQRVPKGVQQIFIGMDGLTFGLIWVLLSFPIVRHVNRKMEETDDELRFRTSFQLVLFIRAQFEVPKWYLIQLTKLLSK
Ga0255166_106816923300026473FreshwaterMDGITIILVWILLSYPIVRMVNRRMEELNDDTRFRTWFQVFLFIRAQFEVPTYYFRK
Ga0208024_109422623300027222EstuarineGIQQIFIGMDGLTILAIWVLLSFPIVRHVNKRMEETDDELRYRTSFQLVLFVRAQFEVPKFYLYKIAKLITG
Ga0255131_104067623300027285FreshwaterMNELTILAIWILLSFPIVRHVNKRMEETEDELRYSTSFQLVLFVRAQFEVPRFYLYKIAKLISR
Ga0255135_104726023300027287FreshwaterMDGLTILAIWVLLSFPIVRHVNKRMEETDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLIAR
Ga0255154_112769113300027467FreshwaterMDGLTFGLIWVLLSFPIVRHVNRKMEETDDELRFRTSFQLVLFIRAQFEVPKWYLI
Ga0209033_119625923300027697Freshwater LakeMDGLTILAIWVLLSFPIVRHVNKRMEEVDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAK
Ga0209443_115019633300027707Freshwater LakeWVLLSFPIVRHVNKRMEETDDELRYKTTFQLVLFVRAQFEVPRFYLYKIAKLIAR
Ga0209355_113865743300027744Freshwater LakeIWVLLSFPIVRHVNKRMEETDDELRYKTTFQLVLFVRAQFEVPRFYLYKIAKLIAR
Ga0209770_1010521013300027769Freshwater LakeMDGLTILTIWILLSFPIVRHVNKRMEEHDDELRFKTSFQLVLFVRAQFEVPRFYLNKIAKLLIR
Ga0209768_1012563843300027772Freshwater LakeDGLTILAIWVLLSFPIVRHVNKRMEETDDELRYKTTFQLVLFVRAQFEVPRFYLYKIAKLIAR
Ga0209358_1003565113300027804Freshwater LakeMDGLTFILIWVLLSYPIVRHVNRRMEETDDDLRFRTSFQLVLFIRAQFEVPKWYLIQLTKLLSK
Ga0209358_1009738413300027804Freshwater LakeMDGLTILTIWILLSFPIVRHVNKRMEEHDDELRFKTSFQLVLFVRAQFEVPRFYLNKIAKLLIG
Ga0209358_1020346013300027804Freshwater LakeQIFIGMDGLTILLVWILSSFPIVRHVNRRMEETNDELRFRTSFQLVLFIRAQFEVPKWYLIQLTKLLK
Ga0209550_1057910223300027892Freshwater LakeGMDIVTFITIWVLLSFPIVRHVNKRMEEKNDDVRFETNFQLLLFLRAQFEVPRFYFINLINLLITKRK
Ga0255174_105344123300028275FreshwaterMDGLTFVLIWVLSSYPIVRHVNRRMEELNDELRFRTSFQLVLFIRAQFEVPKWYL
Ga0315899_1159042023300031784FreshwaterMDGLTILAIWVLLSFPIVRHVNKRMEESDDELRYRTSFQLILFVRAQFEVPRFYLYKIAKLITG
Ga0315909_1006089523300031857FreshwaterMDGFSIALIWLLLSFPIVRHVNKRMEELDDELRFKTSFQLVLFIRAQFEVPKYYLIQLTKLLSK
Ga0315909_1041343513300031857FreshwaterMDGLTILTIWVLLSFPIVRHVNKRMEETEDDLRFRTSFQLVLFVRAQFEVPRFYLNK
Ga0315909_1084165223300031857FreshwaterMDGVTIGLVWILLSYPIVRMVNRRMEELNDDTRFRTWFQVFLFVRAQFEVPVFYFRKLINLIK
Ga0315904_1103292923300031951FreshwaterMDGLTILTIWVLLSFPIVRHVNKRMEEVDDELRFRTSFQLVLFVRAQFEVPKFYLN
Ga0315904_1106298513300031951FreshwaterLTILLFWILLSFPIVRHVNKKMEQLDDELRFKTSFQLVLFIRAQFEVPKWYFIQLTKLLS
Ga0315905_1049454443300032092FreshwaterMDGLTILAIWVLLSFPIVRHVNKRMEELDDELRFRTSFQLVLFVRAQFEVPKFYLNKIAKLLIG
Ga0315902_1108507523300032093FreshwaterITMDLLTILLVWVLLSYPIVRHVNTKMEEANDTQRFRVAFQLVLFIRAQFEVPKWYFIQLTKLLSK
Ga0315903_1044875213300032116FreshwaterMDGLTILLVWILLSFPIVRHVNRKMEETDDVLRFKTSFQLVLFIRAQFEVPKW
Ga0315903_1056418113300032116FreshwaterLTILLVWVLLSYPIVRHVNTKMEEANDTQRFRVAFQLVLFIRAQFEVPKWYFIQLTKLLS
Ga0334996_0089011_106_3003300033994FreshwaterMDGLTILAIWVLLSFPIVRHVNKRMEENDDELRFRTSFQLVLFVRAQLEVPRFYFDKITKLLFR
Ga0334979_0080754_1688_18823300033996FreshwaterMDGLTILAIWVLLSFPIVRHVNKRMEETEDDLRYSTSFQLVLFVRAQFEVPRFYLYKIAKLITG
Ga0334985_0229138_331_5253300034018FreshwaterMDGLTILTIWILLSFPIVRHVNKRMEEHDDDLRFRTSFQLVLFVRAQFEVPRFYFDKITKLLFR
Ga0334985_0501562_512_6973300034018FreshwaterLTFISIWILLSFPIVRHVNTKMEEANDMHRFKIAFQFVLFIRAQFEVPKWYLIQLTKLLS
Ga0335029_0173084_3_1973300034102FreshwaterMDGLTILAIWVLLSFPIVRHVNKRMEESDDELRFRTAFQLILFVRAQFEVPRFYLYKIAKLLIR
Ga0335031_0188797_2_1693300034104FreshwaterLSFPIVRHVNKRMEEKNDDVRFETNFQLLLFLRAQFEVPKFYFINLMNLLITKRK
Ga0335031_0763144_198_3923300034104FreshwaterMDGLTILTIWILLSFPIVRHVNKRMEEHDDELRFKTSFQLVLFVRAQLEVPRFYFDKITKLLFR
Ga0335035_0503490_1_1923300034105FreshwaterDGLTILTIWVLLSFPIVRHVNKRMEEHDDDLRFRTSFQLVLFVRAQFEVPRFYFDKITKLLFR
Ga0335036_0876058_333_5123300034106FreshwaterILAIWVLLSFPIVRHVNKRMEETEDDLRYSTSFQLVLFVRAQFEVPRFYLYKIAKLITG
Ga0335055_0383983_217_4113300034110FreshwaterMDGLTILAIWILLSFPIVRHVNTKMEEANDNQRFKLAFQFALFIRAQFEVPKWYLIQLTKLLSK
Ga0335060_0544970_432_5903300034122FreshwaterLSFPIVRHVNKRMEESDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG
Ga0335017_0401217_562_7413300034167FreshwaterILAIWVLLSFPIVRHVNKRMEESDDELRYRTSFQLVLFVRAQFEVPRFYLYKIAKLITG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.