Metagenome Family F036848

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036848
Family Type	Metagenome
Number of Sequences	169
Average Sequence Length	47 residues
Representative Sequence	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTTDEGYYGTIANDILDG
Number of Associated Samples	132
Number of Associated Scaffolds	169

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.88 %
% of genes near scaffold ends (potentially truncated)	98.82 %
% of genes from short scaffolds (< 2000 bps)	89.94 %
Associated GOLD sequencing projects	123
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.006 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.752 % of family members)
Environment Ontology (ENVO)	Unclassified (31.361 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.621 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 58.67% β-sheet: 0.00% Coil/Unstructured: 41.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 169 Family Scaffolds
PF01370	Epimerase	72.19
PF01943	Polysacc_synt	1.78
PF14667	Polysacc_synt_C	1.78
PF14023	DUF4239	1.78
PF00196	GerE	1.18
PF03734	YkuD	1.18
PF14364	DUF4408	0.59
PF01073	3Beta_HSD	0.59
PF14534	DUF4440	0.59
PF00005	ABC_tran	0.59
PF01554	MatE	0.59
PF01075	Glyco_transf_9	0.59

COG ID	Name	Functional Category	% Frequency in 169 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.18
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.18
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.01 %
Unclassified	root	N/A	28.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.01 %
Unclassified	root	N/A	28.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.01 %
Unclassified	root	N/A	28.99 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	49.11 %
Unclassified	root	N/A	28.99 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	49.11 %
Unclassified	root	N/A	28.99 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	40.83 %
Unclassified	root	N/A	28.99 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	5.33 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	40.83 %
Unclassified	root	N/A	28.99 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	5.33 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	40.83 %
Unclassified	root	N/A	28.99 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	5.33 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	40.83 %
Unclassified	root	N/A	28.99 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	5.33 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	40.83 %
Unclassified	root	N/A	28.99 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5.33 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_103554095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	873	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1101612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300000890\|JGI11643J12802_10496147	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300000890\|JGI11643J12802_10593374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	747	Open in IMG/M
3300000890\|JGI11643J12802_10600965	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300000953\|JGI11615J12901_13156323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300000955\|JGI1027J12803_100114373	Not Available	1203	Open in IMG/M
3300000955\|JGI1027J12803_100583080	Not Available	988	Open in IMG/M
3300000955\|JGI1027J12803_100671458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300000955\|JGI1027J12803_103685789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	525	Open in IMG/M
3300000955\|JGI1027J12803_107980342	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300000956\|JGI10216J12902_104495153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300001990\|JGI24737J22298_10079302	Not Available	977	Open in IMG/M
3300004479\|Ga0062595_101792136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300005178\|Ga0066688_10120076	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300005186\|Ga0066676_10150365	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300005290\|Ga0065712_10529035	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005293\|Ga0065715_10317727	Not Available	1008	Open in IMG/M
3300005294\|Ga0065705_10168755	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300005332\|Ga0066388_100865144	Not Available	1487	Open in IMG/M
3300005332\|Ga0066388_102010026	Not Available	1036	Open in IMG/M
3300005332\|Ga0066388_102013298	Not Available	1036	Open in IMG/M
3300005332\|Ga0066388_106652824	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300005365\|Ga0070688_100100695	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1904	Open in IMG/M
3300005365\|Ga0070688_100203408	Not Available	1387	Open in IMG/M
3300005439\|Ga0070711_100073748	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2412	Open in IMG/M
3300005440\|Ga0070705_100561535	Not Available	877	Open in IMG/M
3300005440\|Ga0070705_101820687	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300005454\|Ga0066687_10015175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3096	Open in IMG/M
3300005457\|Ga0070662_101488478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300005555\|Ga0066692_10112333	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300005558\|Ga0066698_10061893	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300005558\|Ga0066698_10496957	Not Available	829	Open in IMG/M
3300005558\|Ga0066698_11008290	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005569\|Ga0066705_10530076	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005574\|Ga0066694_10509298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300005598\|Ga0066706_10482452	Not Available	988	Open in IMG/M
3300005764\|Ga0066903_101599494	Not Available	1236	Open in IMG/M
3300005764\|Ga0066903_102239389	Not Available	1054	Open in IMG/M
3300005764\|Ga0066903_102710314	Not Available	961	Open in IMG/M
3300005764\|Ga0066903_102924662	Not Available	926	Open in IMG/M
3300005764\|Ga0066903_104158854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	775	Open in IMG/M
3300005764\|Ga0066903_105497455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300005764\|Ga0066903_106062525	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005764\|Ga0066903_106470430	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300006034\|Ga0066656_11053990	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006175\|Ga0070712_100070247	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300006175\|Ga0070712_100753354	Not Available	833	Open in IMG/M
3300006755\|Ga0079222_10803846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	768	Open in IMG/M
3300006797\|Ga0066659_10103024	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300006804\|Ga0079221_11605801	Not Available	526	Open in IMG/M
3300006904\|Ga0075424_100367494	Not Available	1533	Open in IMG/M
3300009012\|Ga0066710_101649802	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300009038\|Ga0099829_11441043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300009137\|Ga0066709_100290693	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300009137\|Ga0066709_100332279	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2080	Open in IMG/M
3300009137\|Ga0066709_102503744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	696	Open in IMG/M
3300009147\|Ga0114129_11753413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	756	Open in IMG/M
3300009148\|Ga0105243_11823670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300009553\|Ga0105249_10053678	All Organisms → cellular organisms → Bacteria	3684	Open in IMG/M
3300009553\|Ga0105249_10701090	Not Available	1072	Open in IMG/M
3300010304\|Ga0134088_10099925	Not Available	1364	Open in IMG/M
3300010321\|Ga0134067_10146511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
3300010336\|Ga0134071_10388447	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300010336\|Ga0134071_10812818	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300010359\|Ga0126376_10285313	Not Available	1426	Open in IMG/M
3300010359\|Ga0126376_10791636	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300010360\|Ga0126372_11813453	Not Available	653	Open in IMG/M
3300010361\|Ga0126378_10407646	Not Available	1472	Open in IMG/M
3300010366\|Ga0126379_11886825	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300010366\|Ga0126379_13046580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300010366\|Ga0126379_13796138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300010371\|Ga0134125_10772229	Not Available	1058	Open in IMG/M
3300010373\|Ga0134128_12926702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300010376\|Ga0126381_101711940	Not Available	908	Open in IMG/M
3300010397\|Ga0134124_13156543	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300010398\|Ga0126383_11902811	Not Available	683	Open in IMG/M
3300010399\|Ga0134127_10550770	Not Available	1174	Open in IMG/M
3300010403\|Ga0134123_13334396	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300012199\|Ga0137383_10044302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3167	Open in IMG/M
3300012201\|Ga0137365_10088019	All Organisms → cellular organisms → Bacteria	2339	Open in IMG/M
3300012207\|Ga0137381_10768598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	836	Open in IMG/M
3300012208\|Ga0137376_11091233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	683	Open in IMG/M
3300012209\|Ga0137379_10385868	Not Available	1310	Open in IMG/M
3300012210\|Ga0137378_11324804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300012285\|Ga0137370_10458413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300012285\|Ga0137370_11050943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300012349\|Ga0137387_10706045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	730	Open in IMG/M
3300012354\|Ga0137366_10539005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	841	Open in IMG/M
3300012356\|Ga0137371_10030947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4128	Open in IMG/M
3300012356\|Ga0137371_10237501	Not Available	1424	Open in IMG/M
3300012356\|Ga0137371_10339700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1167	Open in IMG/M
3300012359\|Ga0137385_10730673	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300012359\|Ga0137385_11001545	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	689	Open in IMG/M
3300012361\|Ga0137360_10078115	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2473	Open in IMG/M
3300012582\|Ga0137358_10277239	Not Available	1139	Open in IMG/M
3300012884\|Ga0157300_1044125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	681	Open in IMG/M
3300012915\|Ga0157302_10052637	Not Available	1157	Open in IMG/M
3300012922\|Ga0137394_11139298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300012924\|Ga0137413_10028198	All Organisms → cellular organisms → Bacteria	3048	Open in IMG/M
3300012925\|Ga0137419_11808385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300012930\|Ga0137407_10531975	Not Available	1100	Open in IMG/M
3300012955\|Ga0164298_10415820	Not Available	874	Open in IMG/M
3300012961\|Ga0164302_11042658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641	Open in IMG/M
3300012971\|Ga0126369_11909560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300012976\|Ga0134076_10266423	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	734	Open in IMG/M
3300012984\|Ga0164309_11249473	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300012986\|Ga0164304_11887720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	500	Open in IMG/M
3300013296\|Ga0157374_10709447	Not Available	1019	Open in IMG/M
3300014166\|Ga0134079_10417392	Not Available	628	Open in IMG/M
3300014325\|Ga0163163_10862412	Not Available	969	Open in IMG/M
3300014968\|Ga0157379_10576855	Not Available	1048	Open in IMG/M
3300014968\|Ga0157379_12272040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300015356\|Ga0134073_10390112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	522	Open in IMG/M
3300015358\|Ga0134089_10280120	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300015359\|Ga0134085_10099290	Not Available	1207	Open in IMG/M
3300015372\|Ga0132256_100971194	Not Available	965	Open in IMG/M
3300015374\|Ga0132255_101253458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1118	Open in IMG/M
3300015374\|Ga0132255_105724326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300016270\|Ga0182036_11578736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300016341\|Ga0182035_11374062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300017659\|Ga0134083_10337872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300018032\|Ga0187788_10193376	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	785	Open in IMG/M
3300018051\|Ga0184620_10007170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2404	Open in IMG/M
3300018066\|Ga0184617_1134663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	714	Open in IMG/M
3300018431\|Ga0066655_10101275	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1615	Open in IMG/M
3300018433\|Ga0066667_12317000	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300019882\|Ga0193713_1118228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	730	Open in IMG/M
3300020010\|Ga0193749_1014766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1526	Open in IMG/M
3300021413\|Ga0193750_1018940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1664	Open in IMG/M
3300021560\|Ga0126371_10336876	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300022534\|Ga0224452_1024498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1703	Open in IMG/M
3300022534\|Ga0224452_1056127	Not Available	1175	Open in IMG/M
3300024286\|Ga0247687_1031278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	774	Open in IMG/M
3300024330\|Ga0137417_1046032	All Organisms → cellular organisms → Bacteria	2884	Open in IMG/M
3300025549\|Ga0210094_1062066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300025898\|Ga0207692_10168067	Not Available	1269	Open in IMG/M
3300025909\|Ga0207705_11049950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300025910\|Ga0207684_11506163	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300025926\|Ga0207659_11599475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300025928\|Ga0207700_10068145	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2726	Open in IMG/M
3300025933\|Ga0207706_10085558	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2772	Open in IMG/M
3300026023\|Ga0207677_10753779	Not Available	868	Open in IMG/M
3300026118\|Ga0207675_101011960	Not Available	849	Open in IMG/M
3300026314\|Ga0209268_1125459	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300026322\|Ga0209687_1082087	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300026324\|Ga0209470_1380416	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300026327\|Ga0209266_1056777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1893	Open in IMG/M
3300026334\|Ga0209377_1054339	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300026334\|Ga0209377_1134889	Not Available	965	Open in IMG/M
3300026377\|Ga0257171_1051186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300026536\|Ga0209058_1103632	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300026550\|Ga0209474_10077458	All Organisms → cellular organisms → Bacteria	2293	Open in IMG/M
3300026557\|Ga0179587_10481046	Not Available	814	Open in IMG/M
3300027018\|Ga0208475_1020357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300027846\|Ga0209180_10597441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300027903\|Ga0209488_10266513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1283	Open in IMG/M
3300028828\|Ga0307312_10682572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	680	Open in IMG/M
3300028878\|Ga0307278_10544762	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031231\|Ga0170824_118813371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300031446\|Ga0170820_14196655	Not Available	542	Open in IMG/M
3300031474\|Ga0170818_103354971	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300031740\|Ga0307468_101387734	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300031890\|Ga0306925_11573909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300031943\|Ga0310885_10148071	Not Available	1120	Open in IMG/M
3300031946\|Ga0310910_10499758	Not Available	965	Open in IMG/M
3300031996\|Ga0308176_12253358	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300032180\|Ga0307471_100375819	Not Available	1540	Open in IMG/M
3300032180\|Ga0307471_103089981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.57%
Host-Associated	Host-Associated	12.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.62%
Plants	Host-Associated → Plants	12.43%
Aquatic	Environmental → Aquatic	2.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.14%
Sediment	Environmental → Aquatic → Sediment	2.37%
Marine	Environmental → Aquatic → Marine	0.59%
Roots	Host-Associated → Plants → Roots	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.82%
Loam	Environmental → Terrestrial → Soil → Loam	14.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.37%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.78%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.59%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.37%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.18%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.18%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.59%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.18%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.18%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.18%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.18%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.18%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.18%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.18%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.18%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1035540951	3300000559	Soil	MTRCESRWVDVVIIALVVILRAPTLLPSLYTTDEAY
AF_2010_repII_A100DRAFT_11016121	3300000655	Forest Soil	MTRSQSRWVNLIIIALVVILRFPTLLPSMYNVDEGYYGTIANDTLDGG
JGI11643J12802_104961472	3300000890	Soil	MTRRQSRWVNVVIIALVVILRGPTLLPSMCLTDEDYYSTIASDILDGGKVYHTAVDTKPP
JGI11643J12802_105933741	3300000890	Soil	MTRCQSRWVNLVIIALVVILRAPTLLPSTYATDEGYYGTIANDILDGGVV
JGI11643J12802_106009653	3300000890	Soil	MTRCQSRWVNVVIIALVVILRAPTLLPSMCLTDEDYYSTIASDILDGGKVYHTAVDTKPP
JGI11615J12901_131563232	3300000953	Soil	MTRCQSRWINAVIIALVVILRAPTLLPSMYTSDEGYYGTIANDILDGGAVY
JGI1027J12803_1001143731	3300000955	Soil	MTRSQSRWINVVIIALVLILRLPTFLPSLYNSDEGYYGIIA
JGI1027J12803_1005830801	3300000955	Soil	MTRYQTRWVNVIIIALVVVLRSPTLLPSMYVSDEGYYG
JGI1027J12803_1006714581	3300000955	Soil	MTRCQSRWVTVIIIALVVILRSPTLLPSMYVSDEGYYGT
JGI1027J12803_1036857891	3300000955	Soil	MTRCESQWVNVVIIALVVILRAPTLLPSLYTTDEAYYGTIANDILDG
JGI1027J12803_1079803421	3300000955	Soil	MTRSQSRWVNVIIIALVVILRAPTLLPSMYTGDEGYYGAGANEILDGGTVYRTA
JGI10216J12902_1044951532	3300000956	Soil	MTRCQSRWVNVIIITIVIILRFPTLLPSLYNSDEGYYGIIANDTLDGGTLYRTA
JGI24737J22298_100793022	3300001990	Corn Rhizosphere	MTRRQSRWVNVVIIALVVILRGPTLLPSMCLTDEDY
Ga0062595_1017921361	3300004479	Soil	MTRRQSRWVNVVIIALVVILRGPTLLPSMCLTDEDYYSTIASDIL
Ga0066688_101200761	3300005178	Soil	MTRRESRWVNVVIIALVVILRSPTLLPSMYLGDEAYYGTIANDILDGG
Ga0066676_101503652	3300005186	Soil	MTRCQSRWINAVIIALVVILRAPTLLPSMYTSDEGYYGTIANDILDGGAVYHTAV
Ga0065712_105290352	3300005290	Miscanthus Rhizosphere	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTTDEGYYGTIANDILDGGVVYHTAVD
Ga0065715_103177272	3300005293	Miscanthus Rhizosphere	MTRCQSRWINVVIIALVVILRGPTLLPSMSLTDEDYYSTI
Ga0065705_101687553	3300005294	Switchgrass Rhizosphere	MTRCQSRWVNVVIIALVVILRAPTLLPSMCLTDEDYYSTIASDILDG
Ga0066388_1008651443	3300005332	Tropical Forest Soil	MTRGQSRWVTVIIIALVVILRSPTLLPSMYVSDEGYYGTIAN
Ga0066388_1020100262	3300005332	Tropical Forest Soil	MTRCQSRWVNVIIIALVVILRLPTLLPSLYNSDEGWYGIIANDTLDGGTFYRT
Ga0066388_1020132982	3300005332	Tropical Forest Soil	MTRCQSRCVNVIIITIVVILRGPTLLPSMCLTDEDYYSTIASDILD
Ga0066388_1066528241	3300005332	Tropical Forest Soil	MTRRQDRWISVVIIALVVVLRVPTLLPSMYTADEAYYATIANDMLDGGTVYQT
Ga0070688_1001006951	3300005365	Switchgrass Rhizosphere	MTRSQSAWVNVIIIALVVALRLPTLLPSMYVSDEGYYGTIANEILDGGAV
Ga0070688_1002034081	3300005365	Switchgrass Rhizosphere	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTTDEGYYGTI
Ga0070711_1000737483	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTTDEGYYGTIANDILDG
Ga0070705_1005615352	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTQCQSRWVSVVIIAVVVILRAPTLLPSMYTIDEAYYSTIAN
Ga0070705_1018206871	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTTDEGYYGTIANDILDGG
Ga0066687_100151751	3300005454	Soil	MTRRQSLCVNMVIIALVVILRAPTLLPSMYTIDEAYYSTIA
Ga0070662_1014884781	3300005457	Corn Rhizosphere	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTTDEGYYGTIANDI
Ga0066692_101123334	3300005555	Soil	MTRRESRWVNVVIIALVVILRSPTLLPSMYLGDEAYYGTIANDILDGGTVYRT
Ga0066698_100618933	3300005558	Soil	MTRCQSRWINVIIIALVVILRAPTLLPSMYTSDEGYYGTIANDILDGGA
Ga0066698_104969571	3300005558	Soil	MTRSQTRWVNVVIIAVVVILRSPTLLPSMYNADEGYYGTI
Ga0066698_110082901	3300005558	Soil	MTRCQNRWINAVIIALVVILRAPTLLPSMYTTDEGYYGTIANDILDGGAVY
Ga0066705_105300761	3300005569	Soil	MTRGEIRWVNVVIIALVVILRSPTLLPSMYGVDEAYYG
Ga0066694_105092981	3300005574	Soil	MTRSQTRWVNVVIIAVVVILRSPTLLPSMYNADEGYYGTIANEIL
Ga0066706_104824521	3300005598	Soil	MTRRQSRWVNVIIIALVVILRLPTLLPSLYNSDEGYYGIIAND
Ga0066903_1015994941	3300005764	Tropical Forest Soil	MTRCESRWVNVVIIALVVILRLPTLLPSLYNSDEGYYGIIANDTLDG
Ga0066903_1022393892	3300005764	Tropical Forest Soil	MTRYQSRWVKVIIIALVVILRSPTLLPSMYVSDEGYYGTIAND
Ga0066903_1027103142	3300005764	Tropical Forest Soil	MTPSQSRWISVVIIALVVILRGPTLLPSISLTDEDYYSTIASDILDGGK
Ga0066903_1029246621	3300005764	Tropical Forest Soil	MTRSQDRWINVVIIALVVILRAPTLLPSMYTVDEAYYA
Ga0066903_1041588541	3300005764	Tropical Forest Soil	MTRRESRWVNVIIVALVVILRSPTLLPSMYNGDEGYYGIIANDTLDG
Ga0066903_1054974552	3300005764	Tropical Forest Soil	MTRCQSRCVNVIIIVLVIILRSPTLVPSLYNSDEG
Ga0066903_1060625251	3300005764	Tropical Forest Soil	MTRRQSGWVNVIIIALVVILRAPTLLPSISLTDEDYYSTIASDILDGGTVYHTAVDTKP
Ga0066903_1064704302	3300005764	Tropical Forest Soil	MTRGQSRWVTVIIIALVVILRSPTLLPSMYVSDEGYYGTIANDILDGGAVYH
Ga0066656_110539902	3300006034	Soil	MTRSQSRWVNVIIIGLVVILRLPTLWPSLYNGDEGYYGTIANDILDGGVV
Ga0070712_1000702473	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTTDEGYY
Ga0070712_1007533541	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTRSQSRWVNVIIIAIVVILRSPTLLPALYNGDEAYYG
Ga0079222_108038462	3300006755	Agricultural Soil	MTRYQSRWVTVVIIALVVILRSPTLLPSMYVSDEGYYGTIANDILDGG
Ga0066659_101030244	3300006797	Soil	MTRRESRWVNVVIIALVVILRSPTLLPSMYGVDEAYYGTIANDI
Ga0079221_116058011	3300006804	Agricultural Soil	MTRSQSWWINVIIITIVVVLRAPTLLPSISLTDEDYYSTIASDILEGGKVYHTAVDT
Ga0075424_1003674943	3300006904	Populus Rhizosphere	MTRRQDAWINAIIIAIVVILRAPTLLPSMYTVDEAYYATIANDMLDGGV
Ga0066710_1016498022	3300009012	Grasslands Soil	MTRCQSRWINVIIIALVVILRAPTLLPSMYTSDEGYYGTIANDILDGGAVYHTAVD
Ga0099829_114410431	3300009038	Vadose Zone Soil	MTRCQSRWVNVIIIALVVILRLPTLLPSLYNSDEGYYGTIANDI
Ga0066709_1002906931	3300009137	Grasslands Soil	MTRRQSLCVNMVIIALVVILRAPTLLPSMYTIDEAY
Ga0066709_1003322794	3300009137	Grasslands Soil	MTRGESRWVNVVIIALVVILRSPTLLPSMYGVDEAYYGTIANDILDG
Ga0066709_1025037442	3300009137	Grasslands Soil	MTRCQSRWINAVIIALVVILRAPTLLPSMYTSDEGYYGT
Ga0114129_117534131	3300009147	Populus Rhizosphere	MTRSQSRWVNVIIIAIVIILRSPTLLPSLYNGDEGYYGIIANDTL
Ga0105243_118236702	3300009148	Miscanthus Rhizosphere	MTRYQTRWVNVIIIALVVVLRSPTLLPSMYVSDEGY
Ga0105249_100536781	3300009553	Switchgrass Rhizosphere	MTRYQSRWVNVIIIALVVILRAPTLLPSMYTTDEGYYGTIANDILDGGAVYHTAV
Ga0105249_107010901	3300009553	Switchgrass Rhizosphere	MTRRQSRWVNVVIIALVVILRGPTLLPSMCLTDEDYYSTIASDILDGGKVYHTA
Ga0134088_100999252	3300010304	Grasslands Soil	MTGCQSRWVNVIIIALVVILRLPTLLPSLYNSDEGYYGIIANDTLD
Ga0134067_101465112	3300010321	Grasslands Soil	MTRCQTRWVNVIIIAIVVILRSPTLLPSMYTIDEAYYATIANDILDGG
Ga0134071_103884471	3300010336	Grasslands Soil	MTRCESRWVNVVIIALVVILRSPTLMPSMYLVDEAYYGTIAN
Ga0134071_108128182	3300010336	Grasslands Soil	MTRCQNRWINAVIIALVVILRAPTLWPSMYTTDEGYYGTIADDIL
Ga0126376_102853133	3300010359	Tropical Forest Soil	MTRRQSHLVTVIIIALVVILRSPTLLPSMFVSDEGYYGTIANDILDGG
Ga0126376_107916362	3300010359	Tropical Forest Soil	MNRAQSRWVNVIIIAVVVTLRSPTLLPSMYVSDEAYYGTMANDILDGGTVY
Ga0126372_118134532	3300010360	Tropical Forest Soil	MTRRQSRWVNVVIVALVVILRGPTLLPSMSLTDEDFYSTMASDILDGGKVYHTAV
Ga0126378_104076462	3300010361	Tropical Forest Soil	MTRCQSRWVNVIIITIVVILRFPTLLPSLYNADEGYYGIIAD
Ga0126379_118868251	3300010366	Tropical Forest Soil	MTRRESRWITVVIVALVVILRAPTLLPSLCLVGLNDEDWYGTIANDILDGG
Ga0126379_130465802	3300010366	Tropical Forest Soil	MTPSQSRWISVVIIALVVILRGPTLLPSISLTDEDYYSTIASDIL
Ga0126379_137961381	3300010366	Tropical Forest Soil	MTRSQSRWINVIIIALVVILRLPTLLPQLYNGDEGYYGIIANDALDGG
Ga0134125_107722291	3300010371	Terrestrial Soil	MTQSQSRWINLVIIALVVILRGPTLLPSISLTDEDYYS
Ga0134128_129267021	3300010373	Terrestrial Soil	MTRRQSLWVTVIIIAIVVILRSPTLLPSMFVSDEGYYGTIANDILDGGAV
Ga0126381_1017119402	3300010376	Tropical Forest Soil	MTRCQSRWVNVIIIALVVILRLPTLLPSLYNSDEGWYGIIANDT
Ga0134124_131565431	3300010397	Terrestrial Soil	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTSDEGY
Ga0126383_119028112	3300010398	Tropical Forest Soil	MTRRQSRWVNVVIIGLVVILRGPTLLPSMSLTDEDFYSTIASDILDGGKVYHTAVDTKP
Ga0134127_105507701	3300010399	Terrestrial Soil	MTRRQSRWVNVVIIALVVILRGPTLLPSMCLTDED
Ga0134123_133343961	3300010403	Terrestrial Soil	MTRRQSRWVNVVIIALVVILRGPTLLPSMCLTDEDYYSTIAS
Ga0137383_100443021	3300012199	Vadose Zone Soil	MTRCQTRWVNVIIVAIVVILRSPTLLPSMYTIDEAYYATIANDILDGGAVYRTA
Ga0137365_100880191	3300012201	Vadose Zone Soil	MTRCESRWITIVIIALVVILRLPTLLPSLYNSDEGYYGI
Ga0137381_107685982	3300012207	Vadose Zone Soil	MTRRQSRWVNVIIIALVVILRAPTLLPSMSLTDEDYYSTIASDILDGGKVYHTAVDTKP
Ga0137376_110912331	3300012208	Vadose Zone Soil	MTQCQSRWVNVIIIALVVILRGPTLLPSMSLTDEDYYSTIASDILDGGKV
Ga0137379_103858683	3300012209	Vadose Zone Soil	MTRRQSRWVNMIIIALVVILRLPTLLPSLYNSDEGYYGIIANDTLDGG
Ga0137378_113248042	3300012210	Vadose Zone Soil	MTRCQSRWVDVTIIALVVILRLPTLLPSLYNGDEGYYGIIANDTLDGG
Ga0137370_104584132	3300012285	Vadose Zone Soil	MTRCQSRWVNVIIIALVVILRLPTLLPSLYNSDEGYYG
Ga0137370_110509432	3300012285	Vadose Zone Soil	MTRCQSRWVNVIIIALVVILRAPTLLPSLYTTDEGYYGTIANDILDGG
Ga0137387_107060451	3300012349	Vadose Zone Soil	MTRCESRWVNVVIIALVVILRSPTLLPSMYLGDEAYYGTIANDILD
Ga0137366_105390051	3300012354	Vadose Zone Soil	MTRCQSRWINAVIIALVVILRAPTLLPSMYTTDEGYYGTIANDI
Ga0137371_100309474	3300012356	Vadose Zone Soil	MTRCQSRWVNVIIIALVVILRLPTLLPSLYNSDEGYYGIIANDTLDGGTF
Ga0137371_102375011	3300012356	Vadose Zone Soil	MTRCQSRWINAVIIALVVILRAPTLLPSMYTSDEGYYGTIANDILDG
Ga0137371_103397002	3300012356	Vadose Zone Soil	MTRRQSRWVSVIIIALVVILRLPTLLPSLYNSDEGYYGIIANDTLDGGTF
Ga0137385_107306733	3300012359	Vadose Zone Soil	MTRSESRWVNVVIIALVVILRSPTLLPSMYLGDEAY
Ga0137385_110015452	3300012359	Vadose Zone Soil	MTRCQSRWVDVTIIALVVILRLPTLLPSLYNGDEGYYGIIANDT
Ga0137360_100781151	3300012361	Vadose Zone Soil	MTRRESRWITVVIIALVVILRAPTLLPSMYIVDEAYYGTIADDILDGGLVYHT
Ga0137358_102772392	3300012582	Vadose Zone Soil	MTGRESRWNTVVIVALVVILRAPTLLPSVCLVGLTDEGYYGTIADDILDGGLVYHTAVDT
Ga0157300_10441251	3300012884	Soil	MTRCQSRWINAVIIALVVILRAPTLLPSMYTTDEGYYGTIANDILDGGAV*
Ga0157302_100526372	3300012915	Soil	MTRCQSRWINAVIIALVVILRAPTLLPSMYTSDEGYYG
Ga0137394_111392981	3300012922	Vadose Zone Soil	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTTDEGYYGTIANDILDGGAVYHTA
Ga0137413_100281984	3300012924	Vadose Zone Soil	MTRFQSRWVNVIIIGLVIILRLPTLWPSLYNGDEGYY
Ga0137419_118083851	3300012925	Vadose Zone Soil	MTRRQSRWVNVIIITIVVILRFPTLLPSLYNADEGYYGIIANDSLDGG
Ga0137407_105319752	3300012930	Vadose Zone Soil	MTRCQSRWVNVIIIALVIILRLPTLLPSLYNSDEGYYGIIANDTLD
Ga0164298_104158201	3300012955	Soil	MTRRESRWITIVIIALVVILRAPTLLPSICRVGLTDEDWYGTIANDILDG
Ga0164302_110426581	3300012961	Soil	MTRCQSRWVNVIIITIVVILRFPTLLPSLYNADEGYY
Ga0126369_119095602	3300012971	Tropical Forest Soil	MTRCQSRWVTLIIIALVVILRSPTLLPSMYVSDEGYYGTIANDILDGG
Ga0134076_102664232	3300012976	Grasslands Soil	MTRRQSRWVNVIIIALVVILRAPTLLPSMYTSDEGYYG
Ga0164309_112494731	3300012984	Soil	MTQSQSRWVSVVIIAVVVILRAPTLLPSMYTIDEAYYSTIANDILDGGAVYRTA
Ga0164304_118877201	3300012986	Soil	MSRRESRWITIVIIALVVILRAPTLLPSICRVGLTDEDWYGTIANDILDGGSVYHTAVDTKPPGIY
Ga0157374_107094472	3300013296	Miscanthus Rhizosphere	MTRRQSRWVNVVIIALVVILRGPTLLPSMCLTDEDYY
Ga0134079_104173922	3300014166	Grasslands Soil	MTRRESYWITVLIIALVMILRAPTLLPSLCLTDEGYYGT
Ga0163163_108624121	3300014325	Switchgrass Rhizosphere	MTRSQSAWVNVIIIALVVALRLPTILPSMYVSDEGYYGTIANEILDGGAVYHAAVD
Ga0157379_105768552	3300014968	Switchgrass Rhizosphere	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTTDEGYYGTIANDILD
Ga0157379_122720402	3300014968	Switchgrass Rhizosphere	MTRRQSRWVNVVIIALVVILRGPTLLPSMCLTDEDYYSTIASDILDGG
Ga0134073_103901121	3300015356	Grasslands Soil	MTRRQSRWVSVIIIALVVILRLPTLLPSLYNSDEGYYGIIANDTLDGGTFYRTA
Ga0134089_102801202	3300015358	Grasslands Soil	MTRCESRWVNVVIIALVVILRSPTLLPSMYLVDEAYYGAIANDILDGGTVYRTAVDT
Ga0134085_100992901	3300015359	Grasslands Soil	MTRGQDRWVNAVIIALVIILRAPTLFPSLYTIDEGYYGTIANDILDGGAV
Ga0132256_1009711942	3300015372	Arabidopsis Rhizosphere	MTRSQSRWVNVVIIALVVILRAPTLLPSMCLTDEDYYS
Ga0132255_1012534581	3300015374	Arabidopsis Rhizosphere	MTRRQSLWVNLVIIALVVLLRAPTLLPSLYTTDEAYYGTIANDILDGGAVYRTA
Ga0132255_1057243261	3300015374	Arabidopsis Rhizosphere	MTRCQSRWVNVIIIALVVILRAPTLLPSLYTTDEGYYGTIANDILDGGAVYHT
Ga0182036_115787362	3300016270	Soil	MTRSRSLWINAIIIAIVVVLRLPTLLPSLYNGDEGYYGTIAND
Ga0182035_113740621	3300016341	Soil	MTRSQSRWVNVIIIALVVLLRSPTLLPLMSLTDEDYYSTIASDILDGGKVYQTAVDTKPP
Ga0134083_103378722	3300017659	Grasslands Soil	MTRCESRWVNVVIIALVVILRSPTLLPSMYTIDEAYYATLANDIL
Ga0187788_101933761	3300018032	Tropical Peatland	MTRAQSRWITGIIIALVIILRGPTLLPSMYLVDEAYY
Ga0184620_100071703	3300018051	Groundwater Sediment	MTRRQSRWVNLVIIALVVILRSPTLLPSLYTTDEAYYGTIAN
Ga0184617_11346632	3300018066	Groundwater Sediment	MTRCQSRWVNVIIIALVVILRLPTLLPSLYNSDEGYYGIIAN
Ga0066655_101012753	3300018431	Grasslands Soil	MTRSQTRWVNVVIIAVVVILRSPTLLPSMYTGDEGYYGAGANEI
Ga0066667_123170002	3300018433	Grasslands Soil	MTLCQSRWVNVIIITIVVILRFPTLLPSLYNADEGYYGIIANDTLDGGT
Ga0193713_11182281	3300019882	Soil	MTRYQTRWVNVIIIALVVVLRSPTLLPSMYVSDEGYYGTI
Ga0193749_10147663	3300020010	Soil	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTTDEGYYGTIA
Ga0193750_10189401	3300021413	Soil	MTRCQSRWINAVIIALVVILRAPTLLPSMYTSDEGYYGTIANDILDGGAVYHTAVD
Ga0126371_103368762	3300021560	Tropical Forest Soil	MTRRESRWITVVIVALVVILRAPTLLPSLCLVGLNDEDWYGTIANDILDGGSVYHTAVDTKPPGIY
Ga0224452_10244983	3300022534	Groundwater Sediment	MTRCQTRWVNVIIIALVVILRSPTLLPSMYTADEGYYGTIANDILDGGTVYRTA
Ga0224452_10561272	3300022534	Groundwater Sediment	MTRCQSRWVNVIIIALVVILRLPTLLPSLYNSDEGYYGIIANDTLDGGT
Ga0247687_10312782	3300024286	Soil	MTRCQSRWVNVIIITIVIILRFPTLLPSLYNSDEGYYGIIANDTLD
Ga0137417_10460321	3300024330	Vadose Zone Soil	MTRCQSRWINVVIIALVVILRGPTLLPSMSLTDEDYYSTMASDILDGGK
Ga0210094_10620661	3300025549	Natural And Restored Wetlands	MTRAQSRWVNVIIIALVVILRLPTLLPSMYAADVGYY
Ga0207692_101680671	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTRSQSRWVNVIIIAIVVILRSPTLLPALYNGDEAYYGIIANDTLDGGTFYRTA
Ga0207705_110499501	3300025909	Corn Rhizosphere	MTRYQTRWVNVIIIALVVVLRSPTLLPSMYVSDEGYYGTIANEILDGGAVYHAA
Ga0207684_115061632	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRESHWITVVIIALVVILRAPTLLPSLCFVGLTDEDYYSTIASDILDGGAVYHTAVDTKPPGIY
Ga0207659_115994752	3300025926	Miscanthus Rhizosphere	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTTDEGYYGTIAN
Ga0207700_100681454	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTRSQSRWVNVIIIAIVVILRSPTLLPALYNGDEA
Ga0207706_100855583	3300025933	Corn Rhizosphere	MTRYQTRWVKVIIIALVVVLRSPTLLPSMYVSDEGYYGTIANDILDGGAVYHTAVD
Ga0207677_107537792	3300026023	Miscanthus Rhizosphere	MTRSQSAWVTVIIIALVVALRLPTLLPSMYVSDEGYYGTIANEILDGGAVYHAAVDTK
Ga0207675_1010119601	3300026118	Switchgrass Rhizosphere	MTRRQSRWVNVVIIALVVILRGPTLLPSMCLTDEDYYSTIASDILDG
Ga0209268_11254592	3300026314	Soil	MTRCESRWVNVVIIALVVILRSPTLLPSMYLIDEAYYGTIANDILDGGTVYHTAVD
Ga0209687_10820872	3300026322	Soil	MTRRQSLCVNMVIIALVVILRAPTLLPSMYTIDEAYYSTIAIDMLDGGTVYRTAVDTK
Ga0209470_13804162	3300026324	Soil	MTRSQSRWVNVIIIALVVILRSPTLLPSMYTGDESYYGTGANEILDGGT
Ga0209266_10567771	3300026327	Soil	MTRCQSRWVNVIIIALVVILRAPTLLPSLYTTDEGYYGT
Ga0209377_10543391	3300026334	Soil	MTRRESRWVNVVIIALVVILRSPTLLPSMYLGDEAYYGTIANDILDGGT
Ga0209377_11348892	3300026334	Soil	MTRCQSRWVNVIIIALVVILRLPTLLPSLYSSDEGYYGIIANDTL
Ga0257171_10511861	3300026377	Soil	MTRCQSRWVNVIIITLVVILRLPTVLPSLYNSDEGYY
Ga0209058_11036321	3300026536	Soil	MTRCESRWVNVVIIALVVILRSPTLLPSMYLGDEAYYGTIANDILDGGT
Ga0209474_100774583	3300026550	Soil	MTRCQSRWINAVIALVVILRFPTLLPSMYTTDEGYY
Ga0179587_104810461	3300026557	Vadose Zone Soil	MTRCQSRWINVVIIALVVILRGPTLLPSMSLTHEDYYSTMASDILDGGK
Ga0208475_10203572	3300027018	Soil	MTRCQSRWVNVVIIALVVILRAPTLLPSMYTIDEAYYSTIANDMLD
Ga0209180_105974411	3300027846	Vadose Zone Soil	MTRCQSRWVNVIIITLVVILRLPTVLPSLYNSDEGYYGIIAN
Ga0209488_102665132	3300027903	Vadose Zone Soil	MTRCQSRWINVVIIALVVILRGPTLLPSMSLTDEDFYS
Ga0307312_106825721	3300028828	Soil	MTGCQTRWVNVIIIAIVVILRSPTLLPSMYTIDEAYYATIANDI
Ga0307278_105447621	3300028878	Soil	MTRRESRWITVVIVALVVILRAPTLLPSLCLVGLTDEDWYGTIANDILDGGSVYHTAVDTKPP
Ga0170824_1188133711	3300031231	Forest Soil	MTRCQSRWVNVIIITIVVILRFPTLLPSLYNADEGYYGIIANDTLDG
Ga0170820_141966551	3300031446	Forest Soil	MTRRESRWITLVIIALVVILRAPTLLPSLCLVPLTDEDYYGTIAND
Ga0170818_1033549711	3300031474	Forest Soil	MTRRESRWITVVIVALVVILRAPTLLPSLCLVGLNDEDWYGTIANDILDGGSVYHTAV
Ga0307468_1013877341	3300031740	Hardwood Forest Soil	MTRCQSRWINAVIIALVVILRAPTLLPSMYTSDEGYYGTIANDILDGG
Ga0306925_115739092	3300031890	Soil	MTRSQSRWVNVVIICLVVILRAPTLLPSLSLTDEDYYSAIASDILDGGKVYHSAVDTKPP
Ga0310885_101480711	3300031943	Soil	MTRSQSAWVNVIIIALVVALRLPTLLPSMYVSDEGYYGTIANEIL
Ga0310910_104997582	3300031946	Soil	MTRSQSRWVNVIIIALVVLLRSPTLLPLMSLTDEDY
Ga0308176_122533581	3300031996	Soil	MTQCQSRWVTIVILALVILLRAPTLLPSMYLVDEAYYGTIANDLLDGGKVYHTAVDTKP
Ga0307471_1003758193	3300032180	Hardwood Forest Soil	MTRCQSRWVNVIIIALVVILRAPTLLPSMYTSDEGYYGTI
Ga0307471_1030899811	3300032180	Hardwood Forest Soil	MTRSQSRWVNVIIIGLVVVLRLPTLLPSLYNGDEGYY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F036848

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences