Metagenome / Metatranscriptome Family F036913

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036913
Family Type	Metagenome / Metatranscriptome
Number of Sequences	169
Average Sequence Length	47 residues
Representative Sequence	VKWKVVLAVGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA
Number of Associated Samples	128
Number of Associated Scaffolds	169

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.60 %
% of genes near scaffold ends (potentially truncated)	44.97 %
% of genes from short scaffolds (< 2000 bps)	83.43 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.781 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.669 % of family members)
Environment Ontology (ENVO)	Unclassified (30.178 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.746 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 54.67% β-sheet: 0.00% Coil/Unstructured: 45.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 169 Family Scaffolds
PF02080	TrkA_C	38.46
PF00487	FA_desaturase	8.88
PF00196	GerE	8.28
PF11611	DUF4352	7.10
PF00999	Na_H_Exchanger	2.96
PF04237	YjbR	2.37
PF13683	rve_3	1.78
PF07731	Cu-oxidase_2	0.59
PF13191	AAA_16	0.59
PF01594	AI-2E_transport	0.59
PF01343	Peptidase_S49	0.59
PF01028	Topoisom_I	0.59
PF06965	Na_H_antiport_1	0.59
PF00400	WD40	0.59
PF07366	SnoaL	0.59
PF07732	Cu-oxidase_3	0.59
PF00005	ABC_tran	0.59
PF16859	TetR_C_11	0.59

COG ID	Name	Functional Category	% Frequency in 169 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	8.88
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	8.88
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	3.55
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	2.96
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	2.96
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	2.96
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	2.96
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	2.37
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.18
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	1.18
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.59
COG3569	DNA topoisomerase IB	Replication, recombination and repair [L]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.78 %
Unclassified	root	N/A	27.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.78 %
Unclassified	root	N/A	27.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.78 %
Unclassified	root	N/A	27.22 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	63.91 %
Unclassified	root	N/A	27.22 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.91 %
Unclassified	root	N/A	27.22 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.77 %
Unclassified	root	N/A	27.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.22 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	6.51 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3.55 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.78 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.22 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	6.51 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	2.96 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.78 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.22 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	6.51 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	1.78 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	0.59 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → environmental samples	0.59 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.22 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	6.51 %
unclassified Microbacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium	1.78 %
uncultured Propionibacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → environmental samples → uncultured Propionibacteriaceae bacterium	0.59 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	0.59 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.22 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	6.51 %
Microbacterium sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp.	1.78 %
Microlunatus phosphovorus NM-1	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus → Microlunatus phosphovorus NM-1	0.59 %
uncultured Propionibacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → environmental samples → uncultured Propionibacteriaceae bacterium	0.59 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_10790833	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300000443\|F12B_11160209	Not Available	855	Open in IMG/M
3300000550\|F24TB_11641612	Not Available	513	Open in IMG/M
3300000858\|JGI10213J12805_10026819	Not Available	504	Open in IMG/M
3300000956\|JGI10216J12902_106392108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1026	Open in IMG/M
3300001431\|F14TB_100323158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1045	Open in IMG/M
3300001686\|C688J18823_10755140	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300002568\|C688J35102_120978570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4495	Open in IMG/M
3300003324\|soilH2_10384009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4199	Open in IMG/M
3300003373\|JGI25407J50210_10042242	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300003911\|JGI25405J52794_10018682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1385	Open in IMG/M
3300004463\|Ga0063356_101768203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	927	Open in IMG/M
3300004479\|Ga0062595_100019909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2509	Open in IMG/M
3300004479\|Ga0062595_100372891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1007	Open in IMG/M
3300004480\|Ga0062592_102582264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300004643\|Ga0062591_101703944	Not Available	639	Open in IMG/M
3300004798\|Ga0058859_10033493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300005093\|Ga0062594_101754257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300005158\|Ga0066816_1008250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300005168\|Ga0066809_10141329	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300005327\|Ga0070658_10459107	Not Available	1098	Open in IMG/M
3300005331\|Ga0070670_101225580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp.	686	Open in IMG/M
3300005339\|Ga0070660_100905577	Not Available	744	Open in IMG/M
3300005347\|Ga0070668_100751563	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005353\|Ga0070669_101884945	Not Available	522	Open in IMG/M
3300005356\|Ga0070674_100513640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1000	Open in IMG/M
3300005455\|Ga0070663_101409614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	617	Open in IMG/M
3300005457\|Ga0070662_100529228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986	Open in IMG/M
3300005457\|Ga0070662_100940432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	738	Open in IMG/M
3300005459\|Ga0068867_101268747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300005543\|Ga0070672_101702863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300005545\|Ga0070695_101570098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300005546\|Ga0070696_101989879	Not Available	504	Open in IMG/M
3300005844\|Ga0068862_100944832	Not Available	850	Open in IMG/M
3300005937\|Ga0081455_10002880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20248	Open in IMG/M
3300005937\|Ga0081455_10936138	Not Available	538	Open in IMG/M
3300005937\|Ga0081455_11017980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	512	Open in IMG/M
3300005981\|Ga0081538_10248059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	681	Open in IMG/M
3300006049\|Ga0075417_10559794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300006058\|Ga0075432_10001051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8792	Open in IMG/M
3300006058\|Ga0075432_10084221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1156	Open in IMG/M
3300006169\|Ga0082029_1054563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5276	Open in IMG/M
3300006196\|Ga0075422_10096413	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300006572\|Ga0074051_11238134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300006844\|Ga0075428_100032203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5791	Open in IMG/M
3300006844\|Ga0075428_100062870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4063	Open in IMG/M
3300006844\|Ga0075428_100675627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1101	Open in IMG/M
3300006844\|Ga0075428_101920333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300006845\|Ga0075421_101639931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	698	Open in IMG/M
3300006846\|Ga0075430_100968164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	701	Open in IMG/M
3300006853\|Ga0075420_100200798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1741	Open in IMG/M
3300006876\|Ga0079217_10221628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	985	Open in IMG/M
3300006876\|Ga0079217_10762398	Not Available	664	Open in IMG/M
3300006881\|Ga0068865_101484909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	607	Open in IMG/M
3300006894\|Ga0079215_10222640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	975	Open in IMG/M
3300006918\|Ga0079216_10580969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	765	Open in IMG/M
3300007004\|Ga0079218_10623008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	991	Open in IMG/M
3300009098\|Ga0105245_10252252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1715	Open in IMG/M
3300009098\|Ga0105245_11492766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300009098\|Ga0105245_11642939	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300009100\|Ga0075418_12719923	Not Available	540	Open in IMG/M
3300009553\|Ga0105249_11386488	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300009553\|Ga0105249_11626515	Not Available	718	Open in IMG/M
3300009553\|Ga0105249_11819473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300009789\|Ga0126307_11220689	Not Available	609	Open in IMG/M
3300009840\|Ga0126313_11014919	Not Available	680	Open in IMG/M
3300010037\|Ga0126304_10823893	Not Available	630	Open in IMG/M
3300010038\|Ga0126315_10163983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1322	Open in IMG/M
3300010040\|Ga0126308_10011661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4475	Open in IMG/M
3300010041\|Ga0126312_10088267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2109	Open in IMG/M
3300010041\|Ga0126312_10925151	Not Available	636	Open in IMG/M
3300010042\|Ga0126314_10429643	Not Available	954	Open in IMG/M
3300010042\|Ga0126314_10773376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300010045\|Ga0126311_10029788	All Organisms → cellular organisms → Bacteria	3347	Open in IMG/M
3300010045\|Ga0126311_10033067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3198	Open in IMG/M
3300010375\|Ga0105239_11408858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300011000\|Ga0138513_100013456	Not Available	1056	Open in IMG/M
3300012212\|Ga0150985_111256369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300012469\|Ga0150984_105075129	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012897\|Ga0157285_10351059	Not Available	517	Open in IMG/M
3300012911\|Ga0157301_10005096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2393	Open in IMG/M
3300012938\|Ga0162651_100012965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1053	Open in IMG/M
3300012938\|Ga0162651_100057134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300013308\|Ga0157375_10614855	Not Available	1245	Open in IMG/M
3300015371\|Ga0132258_10102907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6735	Open in IMG/M
3300015371\|Ga0132258_10465782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3153	Open in IMG/M
3300015371\|Ga0132258_10576525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2823	Open in IMG/M
3300015371\|Ga0132258_12217228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	1379	Open in IMG/M
3300015372\|Ga0132256_102299872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300015373\|Ga0132257_102459612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300015374\|Ga0132255_102431449	Not Available	800	Open in IMG/M
3300015374\|Ga0132255_105429475	Not Available	539	Open in IMG/M
3300017792\|Ga0163161_10057184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	2834	Open in IMG/M
3300017792\|Ga0163161_10300700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1263	Open in IMG/M
3300017792\|Ga0163161_11509640	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300017965\|Ga0190266_10143655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1061	Open in IMG/M
3300017965\|Ga0190266_10946225	Not Available	571	Open in IMG/M
3300018027\|Ga0184605_10424416	Not Available	590	Open in IMG/M
3300018031\|Ga0184634_10249818	Not Available	813	Open in IMG/M
3300018061\|Ga0184619_10282733	Not Available	761	Open in IMG/M
3300018066\|Ga0184617_1023419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1398	Open in IMG/M
3300018073\|Ga0184624_10032025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2037	Open in IMG/M
3300018076\|Ga0184609_10489367	Not Available	561	Open in IMG/M
3300018082\|Ga0184639_10088113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1634	Open in IMG/M
3300018082\|Ga0184639_10515082	Not Available	601	Open in IMG/M
3300018429\|Ga0190272_11151297	Not Available	757	Open in IMG/M
3300018432\|Ga0190275_10592955	Not Available	1155	Open in IMG/M
3300018466\|Ga0190268_10054219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1613	Open in IMG/M
3300018466\|Ga0190268_10190082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1106	Open in IMG/M
3300018466\|Ga0190268_11345337	Not Available	606	Open in IMG/M
3300018469\|Ga0190270_10093099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2280	Open in IMG/M
3300018476\|Ga0190274_11947800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300018481\|Ga0190271_10748682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1101	Open in IMG/M
3300018481\|Ga0190271_11238535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300018481\|Ga0190271_12132810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300018481\|Ga0190271_13355707	Not Available	537	Open in IMG/M
3300019279\|Ga0184642_1554644	Not Available	636	Open in IMG/M
3300019767\|Ga0190267_10773843	Not Available	633	Open in IMG/M
3300019767\|Ga0190267_10932149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp.	599	Open in IMG/M
3300019767\|Ga0190267_11332837	Not Available	539	Open in IMG/M
3300019869\|Ga0193705_1004612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus → Microlunatus phosphovorus NM-1	3019	Open in IMG/M
3300019873\|Ga0193700_1006706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1802	Open in IMG/M
3300019873\|Ga0193700_1043881	Not Available	717	Open in IMG/M
3300021078\|Ga0210381_10219115	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300021510\|Ga0222621_1050796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300022694\|Ga0222623_10207852	Not Available	759	Open in IMG/M
3300022694\|Ga0222623_10222000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300022756\|Ga0222622_10212028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1292	Open in IMG/M
3300022756\|Ga0222622_10216785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	1279	Open in IMG/M
3300022756\|Ga0222622_10376839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	994	Open in IMG/M
3300023058\|Ga0193714_1063526	Not Available	519	Open in IMG/M
3300025935\|Ga0207709_10400916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1049	Open in IMG/M
3300025935\|Ga0207709_10514832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	936	Open in IMG/M
3300025937\|Ga0207669_10140926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1674	Open in IMG/M
3300025961\|Ga0207712_11087019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300025961\|Ga0207712_11772472	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300027560\|Ga0207981_1048547	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300027873\|Ga0209814_10176259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300027907\|Ga0207428_10004597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13081	Open in IMG/M
3300028597\|Ga0247820_11010085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp.	594	Open in IMG/M
3300028608\|Ga0247819_10332438	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300028707\|Ga0307291_1004097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3112	Open in IMG/M
3300028707\|Ga0307291_1049474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1009	Open in IMG/M
3300028716\|Ga0307311_10229775	Not Available	548	Open in IMG/M
3300028718\|Ga0307307_10002077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5031	Open in IMG/M
3300028719\|Ga0307301_10005883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3422	Open in IMG/M
3300028722\|Ga0307319_10023796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → environmental samples → uncultured Propionibacteriaceae bacterium	1879	Open in IMG/M
3300028778\|Ga0307288_10036595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1647	Open in IMG/M
3300028875\|Ga0307289_10096395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1205	Open in IMG/M
3300028876\|Ga0307286_10369626	Not Available	535	Open in IMG/M
3300030496\|Ga0268240_10089675	Not Available	709	Open in IMG/M
3300030903\|Ga0308206_1073994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	722	Open in IMG/M
3300030905\|Ga0308200_1130093	Not Available	564	Open in IMG/M
3300030989\|Ga0308196_1073782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300031082\|Ga0308192_1070088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300031091\|Ga0308201_10170625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300031092\|Ga0308204_10251149	Not Available	573	Open in IMG/M
3300031092\|Ga0308204_10254265	Not Available	571	Open in IMG/M
3300031114\|Ga0308187_10078756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300031184\|Ga0307499_10027379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1273	Open in IMG/M
3300031454\|Ga0272427_1015277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6117	Open in IMG/M
3300031731\|Ga0307405_10001131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10944	Open in IMG/M
3300031731\|Ga0307405_10143582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1668	Open in IMG/M
3300031740\|Ga0307468_101411632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300031852\|Ga0307410_10000531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15580	Open in IMG/M
3300031901\|Ga0307406_10306887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1222	Open in IMG/M
3300032004\|Ga0307414_10016431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4498	Open in IMG/M
3300032126\|Ga0307415_101054835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	758	Open in IMG/M
3300034673\|Ga0314798_104014	Not Available	604	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.36%
Host-Associated	Host-Associated	39.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.89%
Plants	Host-Associated → Plants	39.05%
Aquatic	Environmental → Aquatic	9.47%
Human	Host-Associated → Human	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.24%
Sediment	Environmental → Aquatic → Sediment	8.28%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.78%
Freshwater	Environmental → Aquatic → Freshwater	1.18%
Roots	Host-Associated → Plants → Roots	1.18%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.59%
Digestive System	Host-Associated → Human → Digestive System	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.28%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.73%
Loam	Environmental → Terrestrial → Soil → Loam	4.14%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.18%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.18%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.59%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.78%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.18%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.59%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.59%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.28%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.51%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.78%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.78%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.18%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.18%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.59%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.59%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.59%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.59%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.59%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.59%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005158	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031454	Rock endolithic microbial communities from Victoria Land, Antarctica - Siegfried Peak sud	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_107908332	3300000363	Soil	VKWKVVLAVGAVTGGALWFVRRRSRRAAADAELWAEATDPIARFGDT*
F12B_111602092	3300000443	Soil	VKWKEVLAVGAVAGGAVWFARRKSRRAAAEAELWAEATDPIARFGES*
F24TB_116416121	3300000550	Soil	VKWKVVLAVGAVAGGAVWFARRKSRRAAAEAELWAEATDPI
JGI10213J12805_100268191	3300000858	Soil	VKWKVVLAIGAVAGSAVWFARRKSRRAVEEAELWAEATDPIARFGES*
JGI10216J12902_1063921083	3300000956	Soil	VKWKVVLAVGAVAGSALWFVRRRSRRVAADAELWAEATDPITRFGDA*
F14TB_1003231582	3300001431	Soil	MVDRVKWKVVLAVGAVAGGAILFARHKSRRAAADAELWAEATDPIARFGDS*
C688J18823_107551401	3300001686	Soil	KVVLAAGAIAGGAFWFVRRKSRRAAEDAELWSEATDPIARFGES*
C688J35102_1209785703	3300002568	Soil	VKWKVVLAAGAIAGGAFWFVRRKSRRAAEDAELWSEATDPIARFGES*
soilH2_103840094	3300003324	Sugarcane Root And Bulk Soil	VKWKVVLAAGAIAGGAFWFVRRKSRRAAEDAELWSEATDPIVRFGES*
JGI25407J50210_100422422	3300003373	Tabebuia Heterophylla Rhizosphere	MALAVGAIAGGALWLVRRRSRRAAEDAELWAEATDPIARFGES*
JGI25405J52794_100186822	3300003911	Tabebuia Heterophylla Rhizosphere	VKWKVVLAVGAVAGGAVWFARRKSRRAAAEAELWAEATDPIARFGES*
Ga0063356_1017682031	3300004463	Arabidopsis Thaliana Rhizosphere	VKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDP
Ga0062595_1000199093	3300004479	Soil	LASAAINTAAKVDRVKWKVVVAVGAVAGGAFWYVRRKSRRTAADAELWAEATDPVTRFGES*
Ga0062595_1003728912	3300004479	Soil	MVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA*
Ga0062592_1025822641	3300004480	Soil	VKWKVVLAAGAIAGGALWFVRRRSRRAEADAELWAEATDPIARFGDS*
Ga0062591_1017039441	3300004643	Soil	MAAMVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA*
Ga0058859_100334932	3300004798	Host-Associated	VKWKLWLAVGALAGGAYWVARRRNRVNADAELWAEATDPVARFGDA*
Ga0062594_1017542571	3300005093	Soil	MVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAAADAELWAEATDPITRFGDA*
Ga0066816_10082502	3300005158	Soil	VKWKVVLAVGAVAGGAFWYVRRKSRRAEADAELWAEATDPISRFGDA*
Ga0066809_101413291	3300005168	Soil	VGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA*
Ga0070658_104591072	3300005327	Corn Rhizosphere	VNWKLWIAVGALAGGAFWAARRRNNRVNADAELWADATDPVARFGDA*
Ga0070670_1012255802	3300005331	Switchgrass Rhizosphere	VNWKLWIAVGALAGGAFWAARRRNNRVNADAERWAAATDPVARFGDV*
Ga0070660_1009055771	3300005339	Corn Rhizosphere	MVERVKWKVALAVGAVAGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA*
Ga0070668_1007515632	3300005347	Switchgrass Rhizosphere	VKWKVVLAVGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA*
Ga0070669_1018849451	3300005353	Switchgrass Rhizosphere	VKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPITRFGNV*
Ga0070674_1005136402	3300005356	Miscanthus Rhizosphere	VKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPIIRFGNA*
Ga0070663_1014096142	3300005455	Corn Rhizosphere	VPPDGYGGPVKWKLWLAVGALAGGAYWVARRRNRVNADAELWADATDPVARFGEV*
Ga0070662_1005292283	3300005457	Corn Rhizosphere	GGCSVVRESDRSANSLAGGRVKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPIIRFGNA*
Ga0070662_1009404321	3300005457	Corn Rhizosphere	VVLAVGAVAGGTLWYVRRKSRRAAADAELWAEATDPITRFGDA*
Ga0068867_1012687471	3300005459	Miscanthus Rhizosphere	VKWTLWLAVGALAGGAYWVARRRNRVNADAELWADATDPVARFGDS*
Ga0070672_1017028632	3300005543	Miscanthus Rhizosphere	VKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATD
Ga0070695_1015700981	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPITRFGN
Ga0070696_1019898792	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MVDRVKWKVVLAVGAVAGGTLWYVRRKSPRAASDAELWAEATDPITRFGDA*
Ga0068862_1009448321	3300005844	Switchgrass Rhizosphere	GALAGGAFWAARRRNNRVNADAERWADAADPVARFGDA*
Ga0081455_1000288014	3300005937	Tabebuia Heterophylla Rhizosphere	VKWKVVLAVGAVAGGAVWFARRKSRRAAAEAELWAEATDPIVRFGES*
Ga0081455_109361381	3300005937	Tabebuia Heterophylla Rhizosphere	VKWKVVLAIGAIAGSAVWFARRKSRRASEEAELWAEATDPIARFGES*
Ga0081455_110179802	3300005937	Tabebuia Heterophylla Rhizosphere	MVDRVKWKVVLAVGAVAGGAILFARRKSRRAAADAELWAEATDPIARFGES*
Ga0081538_102480592	3300005981	Tabebuia Heterophylla Rhizosphere	VKWKVVLAVGAVAGGALWFVRRRSRRAEEDAELWAEATDPITRFGES*
Ga0075417_105597942	3300006049	Populus Rhizosphere	AGGAVWYVRRKSRRAEADAELWAEATDPITRFGNA*
Ga0075432_100010511	3300006058	Populus Rhizosphere	VKWKVVLAAGAIAGGAFWFVRRKSRRAAEDAELWS
Ga0075432_100842212	3300006058	Populus Rhizosphere	VKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPITRFGNA*
Ga0082029_10545634	3300006169	Termite Nest	MVDRVKWKVVLAVGAVAGGAILFARRKSRRAAADAELWAEATDPIARFGDS*
Ga0075422_100964133	3300006196	Populus Rhizosphere	AGAIAGGAFWFVRRKSRRAAEDAELWSEATDPIVRFGES*
Ga0074051_112381342	3300006572	Soil	MVLAVGAVAGGAVWFVRRKSRRAVAEAELWAEATDPIARFGET*
Ga0075428_1000322037	3300006844	Populus Rhizosphere	VKWKVVLAAGAIAGGAFWFVRRKSRRAAEDAELWSEATDPIERFGES*
Ga0075428_1000628704	3300006844	Populus Rhizosphere	MVLAVGAVAGGAVWFARRKSRRAAAEAELWAEATDPIVRFGES*
Ga0075428_1006756273	3300006844	Populus Rhizosphere	MVDRVKWKVAIAVGAVAGGALWFARRKSRRAAADAELWAEATDPIARFGET*
Ga0075428_1019203332	3300006844	Populus Rhizosphere	AAMVDRVKWKVVLAVGAVAGGAILFARRKSRRAAADAELWAEATDPIARFGDS*
Ga0075421_1016399312	3300006845	Populus Rhizosphere	AMVDRVKWKVVLAVGAVAGGAILFARRKSRRAAADAELWAEATDPIARFGDS*
Ga0075430_1009681641	3300006846	Populus Rhizosphere	VGAVAGGAVWFARRKSRRAAAEAELWAEATDPIVRFGES*
Ga0075420_1002007983	3300006853	Populus Rhizosphere	GCSVVRESDRSASSLAGGRVKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPITRFGNA*
Ga0079217_102216282	3300006876	Agricultural Soil	VDRVKWKVVLAVGAAAGGAFWFVRRKSRRSEADAELWAEATDPIARFGDG*
Ga0079217_107623982	3300006876	Agricultural Soil	VKWKVVLAVGAAAGGAYWYVWRKARRAESDAELWAEATDPIGRFGDPDLSESS*
Ga0068865_1014849092	3300006881	Miscanthus Rhizosphere	VKWKLWLAVGALAGGAYWVARRRNRVNADAELWADATDPVARFGEV*
Ga0079215_102226402	3300006894	Agricultural Soil	VKWKVVLAVGAAAGGAYWYVWRKARRAESDAELWAEATDPIARFGDPDLSESS*
Ga0079216_105809692	3300006918	Agricultural Soil	VKWKVVLAIGAVAGGAVWFARRKSRRAADEAELWAEATDPIARFGES*
Ga0079218_106230083	3300007004	Agricultural Soil	VKWKVVLAVGAAAGGAYWYVWRKARQAESDAELWAEATDPIARFGDPDL*
Ga0105245_102522522	3300009098	Miscanthus Rhizosphere	MVERVKWKVVLAVGAVAGGTLWYVRRKSRRAAADAELWAEATDPITRFGDA*
Ga0105245_114927661	3300009098	Miscanthus Rhizosphere	RVKWKVVLAVGAVAGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA*
Ga0105245_116429393	3300009098	Miscanthus Rhizosphere	LPRYGGRVKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPITRFGNV*
Ga0075418_127199231	3300009100	Populus Rhizosphere	MVDVVKWKVVLAVGALAGGALWFVRRKSRQAAEDAELWSEATDPVTRFGES*
Ga0105249_113864881	3300009553	Switchgrass Rhizosphere	DRPTNSVAKVGRVKWKVVLAVGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA*
Ga0105249_116265151	3300009553	Switchgrass Rhizosphere	VKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPI
Ga0105249_118194732	3300009553	Switchgrass Rhizosphere	VDRVKWKVVLAVGAVAGGTLWYVRRKSRRAAADAELWAEATDPITRFGDA*
Ga0126307_112206891	3300009789	Serpentine Soil	VKWKVVLAVGAAAGGAYWYVWRKARRAESDAELWAEATDPIARFGDPDL
Ga0126313_110149191	3300009840	Serpentine Soil	MVDVVKWKVALAVGALAGGAMWFVRRKSRRAAEDAELWSEATDPVTRFGES*
Ga0126304_108238932	3300010037	Serpentine Soil	MVDRVKWKVVVAVGAVAGGALWFARRKSRRAAADAELWAEATDPIARFGES*
Ga0126315_101639831	3300010038	Serpentine Soil	VKWKVVLAVGAAAGGAMWFARRKSRRAAADAELWAEATDPIARFGDS*
Ga0126308_100116613	3300010040	Serpentine Soil	MALAVGAIAGGALWFVRRRSRRAEEDAELWAEATDPITRFGDT*
Ga0126312_100882671	3300010041	Serpentine Soil	MVDRVKWKVVVAVGAVAGGAVWFARRKSRRAAADAELWAEATDPIARFGDS*
Ga0126312_109251511	3300010041	Serpentine Soil	MVDRVKWKVVVAVGAVAGGALWFARRKSRRAAADAELWAEATDPIARFGDS*
Ga0126314_104296432	3300010042	Serpentine Soil	MVDRVKWKVVLAVGAAAGGAMWFARRKSRRAAADAELWAEATDPIARFGDS*
Ga0126314_107733762	3300010042	Serpentine Soil	RYGGRVKWKVVLAVGAIAGGALWFVRRRSRRAEQDAELWAEATDPIARFGES*
Ga0126311_100297883	3300010045	Serpentine Soil	MVDVVKWKVALAVGALAGGALWFVRRKSRRAAEDAELWSEATDPVTRFGES*
Ga0126311_100330674	3300010045	Serpentine Soil	VKWKVVLAVGAAAGGAYWYVWRKARRAESDAELWAEATDPIARFGDPDT*
Ga0105239_114088581	3300010375	Corn Rhizosphere	AMVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAAADAELWAEATDPITRFGDA*
Ga0138513_1000134561	3300011000	Soil	LASDAINTAAKVDRVKWKVVLAVGAVAGGTFWYVRRKSRRAAADAELWAEATDPITRFGNA*
Ga0150985_1112563691	3300012212	Avena Fatua Rhizosphere	VNWKLWVAVGALAGGAFWAARRRNNRVNADAERWAAATDPVARFGDV*
Ga0150984_1050751293	3300012469	Avena Fatua Rhizosphere	GGAFWFVRRKSRRAAEDAELWSEATDPIARFGES*
Ga0157285_103510592	3300012897	Soil	AKVDRVKWKVVLAVGAVAGGAFWYVRRKSRRTASEAELWAEATDPVTRFGES*
Ga0157301_100050963	3300012911	Soil	KVVLAVGAVAGGAFWYVRRKSRRTASEAELWAEATDPVTRFGDS*
Ga0162651_1000129651	3300012938	Soil	GGRVKWKVVVAVGAIAGGALWFVRRRSRRAEADAELWAEATDPIARFGDS*
Ga0162651_1000571342	3300012938	Soil	VLAAGAVAGGALWFVRRRSRRAADEAELWAEATDPIARFGES*
Ga0157375_106148552	3300013308	Miscanthus Rhizosphere	VKWKLWLAVGALAGGVYWVARRRNRVNADAELWADATDPVARFGDS*
Ga0132258_101029071	3300015371	Arabidopsis Rhizosphere	VKWKVVLAIGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA*
Ga0132258_104657822	3300015371	Arabidopsis Rhizosphere	VKWKEVLAIGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA*
Ga0132258_105765252	3300015371	Arabidopsis Rhizosphere	LASAAINTAAKVDRVKWKVVFAVGAVAGGAFWYVRRKSRRTAAEAELWAEATDPVTRFGES*
Ga0132258_122172281	3300015371	Arabidopsis Rhizosphere	MVDRVRWKVVLAVGAVAGGALWYVRRKSRRTAADAEL
Ga0132256_1022998721	3300015372	Arabidopsis Rhizosphere	IGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA*
Ga0132257_1024596121	3300015373	Arabidopsis Rhizosphere	RVKWKVVLAIGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA*
Ga0132255_1024314493	3300015374	Arabidopsis Rhizosphere	ALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPITRFGNA*
Ga0132255_1054294751	3300015374	Arabidopsis Rhizosphere	KVVLAIGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA*
Ga0163161_100571843	3300017792	Switchgrass Rhizosphere	VKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAE
Ga0163161_103007002	3300017792	Switchgrass Rhizosphere	KWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPITRFGNA
Ga0163161_115096402	3300017792	Switchgrass Rhizosphere	WKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPIIRFGNA
Ga0190266_101436553	3300017965	Soil	MVDVVKWKVALAVGALAGGALWFVRRKSRQAAEDAELWSEATDPVTRFGDT
Ga0190266_109462251	3300017965	Soil	MVLAVGAVAGGALWFVRRKARRAAAEAELWEEATDPIARFGET
Ga0184605_104244161	3300018027	Groundwater Sediment	VKWKVVLAVGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA
Ga0184634_102498181	3300018031	Groundwater Sediment	MVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAAADAELWA
Ga0184619_102827331	3300018061	Groundwater Sediment	VKWKVMLAVGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA
Ga0184617_10234193	3300018066	Groundwater Sediment	VKWKVVLAVGAVAGGAFWFVRRKSRRAADEAELWAEATDPIARFGES
Ga0184624_100320252	3300018073	Groundwater Sediment	MVERVKWKVVVAVGAVAGGALWFVRRKSRQAAADAELWAEATDPIARFGES
Ga0184609_104893672	3300018076	Groundwater Sediment	MAAMVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAAADAELWAEATDPITRFGDA
Ga0184639_100881132	3300018082	Groundwater Sediment	VKWKVVLAVGAVAGGALWFVRRKSRRAADEAELWAEATDPIARFGES
Ga0184639_105150822	3300018082	Groundwater Sediment	VDRVKWKVVVAVGAVAGGALWFVRRKSRQAAADAELWAEATDPIARFGES
Ga0190272_111512972	3300018429	Soil	VKWKLWIAIGALTSGAFWIARRKNKINADAELWAEATDPVARFGDA
Ga0190275_105929552	3300018432	Soil	VKWKLWVAVGALAGGAIWVARRKNKVNADAELWAEATDPVARFGDA
Ga0190268_100542192	3300018466	Soil	MVDLVKWKMAVAVGALAGGALWFVRRKSRRAAEDAELWSEATDPVTRFGES
Ga0190268_101900822	3300018466	Soil	MVDRVKWKVAIAVGAVAGGALWFARRKSRRAAADAELWAEATDPIARFGDA
Ga0190268_113453372	3300018466	Soil	MVLAVGAVAGGAVWFARRKSRRAAAEAELWAEATDPIARFGES
Ga0190270_100930992	3300018469	Soil	VKWKVVVAVGAVAGGALWFVRRKSRQAAADAELWAEATDPIARFGES
Ga0190274_119478002	3300018476	Soil	VKWKVWLAVGALAGGAYWVARRRNRVNADAELWAEATDPVARFGDA
Ga0190271_107486822	3300018481	Soil	AVGAVAGGALWFARRKSRRAAADAELWAEATDPIARFGDA
Ga0190271_112385353	3300018481	Soil	VDRVKWKVAVAVGAIAGGALWFVRRKSRQAAADAELWAEATDPIARFGES
Ga0190271_121328102	3300018481	Soil	VKWKLWLAVGALAGGAYWVARRRNRVNADAELWAEATDPVARFGEA
Ga0190271_133557072	3300018481	Soil	VKWKLWVAVGALAGGAFWVARRKNKVNADAELWAEATDPVARFGDA
Ga0184642_15546442	3300019279	Groundwater Sediment	VAVGAIAGGALWFVRRRSRRAEADAELWAEATDPIARFGDS
Ga0190267_107738432	3300019767	Soil	MVLAVGAVAGGALWFVRRKSRRAAAEAELWAEATDPIARFGET
Ga0190267_109321492	3300019767	Soil	VKWKLWVAVGALAGGAVWVARRRNRVNDGAELWASATDPVTRFGDADDS
Ga0190267_113328372	3300019767	Soil	AGGALWFVRRRSRRVADEAELWAEATDPIARFGES
Ga0193705_10046122	3300019869	Soil	MVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAAADAELWAEATDPITRFGDA
Ga0193700_10067062	3300019873	Soil	VKWKVVLAVGAVAGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA
Ga0193700_10438811	3300019873	Soil	MVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAASDAELWAKA
Ga0210381_102191151	3300021078	Groundwater Sediment	SVAKVGRVKWKVVLAVGAVAGGAFWYVRRKSRRAETDAELWAEATDPITRFGDA
Ga0222621_10507961	3300021510	Groundwater Sediment	WKVVLAVGAVAGGALWFVRRKSRRAADEAELWAEATDPIARFGES
Ga0222623_102078521	3300022694	Groundwater Sediment	VKWKVVLAVGAVAGGAFWYVRRKSRRAETDAELWAEATDPITRFGDA
Ga0222623_102220001	3300022694	Groundwater Sediment	AGGALWFVRRKSRRAADEAELWAEATDPIARFGES
Ga0222622_102120281	3300022756	Groundwater Sediment	VVLAVGAVAGGAFWYVRRKSRRAETDAELWAEATDPITRFGDS
Ga0222622_102167853	3300022756	Groundwater Sediment	MVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA
Ga0222622_103768391	3300022756	Groundwater Sediment	NHRTAMVDRVKWKVAVAVGAVAGGALWFARRKSRRAAADAELWAEATDPIARFGDS
Ga0193714_10635261	3300023058	Soil	MAAMVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA
Ga0207709_104009163	3300025935	Miscanthus Rhizosphere	VKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPIIRFGNA
Ga0207709_105148321	3300025935	Miscanthus Rhizosphere	AVAGGAVWYVRRKSRRAEADAELWAEATDPIIRFGNA
Ga0207669_101409262	3300025937	Miscanthus Rhizosphere	VKWKLWLAVGALAGGAYWVARRRNRVNADAELWAEATDPVARFGDA
Ga0207712_110870191	3300025961	Switchgrass Rhizosphere	LAVGAVAGGTLWYVRRKSRRAAADAELWAEATDPITRFGDA
Ga0207712_117724722	3300025961	Switchgrass Rhizosphere	TNSVAKVGRVKWKVVLAVGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA
Ga0207981_10485471	3300027560	Soil	TVAKVGRVKWKVVLAVGAVAGGAFWYVRRKSRRAEADAELWAEATDPITRFGDA
Ga0209814_101762591	3300027873	Populus Rhizosphere	AGGAVWYVRRKSRRAEADAELWAEATDPITRFGNA
Ga0207428_100045973	3300027907	Populus Rhizosphere	VKWKVVLAAGAIAGGAFWFVRRKSRRAAEDAELWSEATDPIVRFGES
Ga0247820_110100852	3300028597	Soil	VPADGYGGPVKWKLWLAVGALAGGAFWVARRRNNRVNADAELWAEATDPVARFGDA
Ga0247819_103324383	3300028608	Soil	GRVKWKVALAIGAVAGGAVWYVRRKSRRAEADAELWAEATDPITRFGNA
Ga0307291_10040971	3300028707	Soil	CRYGGRVKWKVVVAVGAIAGGALWFVRRRSRRAEADAELWAEATDPIARFGDS
Ga0307291_10494741	3300028707	Soil	WKVVLAVGAVAGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA
Ga0307311_102297751	3300028716	Soil	VLAVGAVAGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA
Ga0307307_100020771	3300028718	Soil	VVVAVGAIAGGALWFVRRRSRRAEADAELWAEATDPIARFGDS
Ga0307301_100058834	3300028719	Soil	AAPASPATPSIQAAMVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAAADAELWAEATDPITRFGDA
Ga0307319_100237962	3300028722	Soil	MALAVGAIAGGALWFVRRRSRRAEEDAELWAEATDPITRFGDT
Ga0307288_100365953	3300028778	Soil	PTKSVAKVGRVKWKVVLAVGAVAGGAFWYVRRKSRRAETDAELWAEATDPITRFGDA
Ga0307289_100963951	3300028875	Soil	VDRVKWKVVLAVGAVAGGTLWYVRRKSRRAAADAELWAEATDPITRFGDA
Ga0307286_103696262	3300028876	Soil	MAAMVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAASDAELWA
Ga0268240_100896752	3300030496	Soil	MVDVVKWKVVLAVGALAGGALWFVRRKSRQAAEDAELWSEATDPVTRFGES
Ga0308206_10739941	3300030903	Soil	RVKWKVVVAVGAIAGGALWFVRRRSRRAEADAELWAEATDPIARFGDS
Ga0308200_11300931	3300030905	Soil	LAVGAVAGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA
Ga0308196_10737821	3300030989	Soil	AGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA
Ga0308192_10700881	3300031082	Soil	AVAGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA
Ga0308201_101706252	3300031091	Soil	RLGAVAGGALWFVRRKSRRAADEAELWAEATDPIARFGES
Ga0308204_102511492	3300031092	Soil	RYCGRVKWKVVVAAGAIAGGALWFVRRRSRRAEADAELWAEATDPIARFGDS
Ga0308204_102542652	3300031092	Soil	MALAVGAIAGGALWFVRRRSRRAEEDAELWAEATDSITRFGDT
Ga0308187_100787562	3300031114	Soil	RVKWKMALAVGAIAGGALWFVRRRSRRAEEDAELWAEATDPITRFGDT
Ga0307499_100273791	3300031184	Soil	TPSIQAAMVDRVKWKVVLAVGAVAGGTLWYVRRKSRRAASDAELWAEATDPITRFGDA
Ga0272427_10152776	3300031454	Rock	MNWKVLLAVGAVAGGVVLAARHRSRRDDAEGAQWAEATDPVARFGDA
Ga0307405_100011314	3300031731	Rhizosphere	VKWKMALAVGAIAGGALWFVRRRSRRAEEDAELWAEATDPITRFGDT
Ga0307405_101435822	3300031731	Rhizosphere	VKWKVVLAVGAAAGGAYWYVWRKARRAESDAELWAEATDPIARFGDPDT
Ga0307468_1014116321	3300031740	Hardwood Forest Soil	DRVKWKVVLAVGAVAGGTLWYVRRKSRRAAADAELWAEATDPITRFGDA
Ga0307410_100005315	3300031852	Rhizosphere	VKWKVVLAVGAIAGGALWFVRRRSRRAEQDAELWAEATDPIARFGES
Ga0307406_103068872	3300031901	Rhizosphere	MVDVVKWKVALAVGALAGGAMWFVRRKSRRAAEDAELWSEATDPVTRFGES
Ga0307414_100164318	3300032004	Rhizosphere	WKVVLAVGAIAGGALWFVRRRSRRAEQDAELWAEATDPIARFGES
Ga0307415_1010548351	3300032126	Rhizosphere	YGGRVKWKVVLAVGAIAGGALWFVRRRSRRAEQDAELWAEATDPIARFGES
Ga0314798_104014_95_262	3300034673	Soil	VPADGYGGPVKWKLWLAVGALAGGAYWVARRRNRVNADAELWAEATDPVARFGEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036913

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences