Metagenome / Metatranscriptome Family F037362

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F037362
Family Type	Metagenome / Metatranscriptome
Number of Sequences	168
Average Sequence Length	48 residues
Representative Sequence	MTDNNGYVLAPLPVAPVNETDMVLLPEGLKALKQVAKEVGLDLRGA
Number of Associated Samples	133
Number of Associated Scaffolds	168

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.63 %
% of genes near scaffold ends (potentially truncated)	91.07 %
% of genes from short scaffolds (< 2000 bps)	95.83 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.262 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (13.095 % of family members)
Environment Ontology (ENVO)	Unclassified (25.595 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.03% β-sheet: 0.00% Coil/Unstructured: 72.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 168 Family Scaffolds
PF13340	DUF4096	59.52
PF13586	DDE_Tnp_1_2	2.98
PF13359	DDE_Tnp_4	1.79
PF01609	DDE_Tnp_1	1.19
PF01526	DDE_Tnp_Tn3	1.19
PF13613	HTH_Tnp_4	0.60
PF13546	DDE_5	0.60
PF13701	DDE_Tnp_1_4	0.60
PF00296	Bac_luciferase	0.60
PF01979	Amidohydro_1	0.60
PF01348	Intron_maturas2	0.60
PF02452	PemK_toxin	0.60
PF13533	Biotin_lipoyl_2	0.60
PF01844	HNH	0.60
PF13358	DDE_3	0.60
PF01610	DDE_Tnp_ISL3	0.60
PF13683	rve_3	0.60
PF02518	HATPase_c	0.60

COG ID	Name	Functional Category	% Frequency in 168 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.19
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.19
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.19
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	1.19
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.19
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.19
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.19
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.60
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.60
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.26 %
Unclassified	root	N/A	7.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.26 %
Unclassified	root	N/A	7.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.26 %
Unclassified	root	N/A	7.74 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.88 %
Unclassified	root	N/A	7.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.76 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.19 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.60 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8.33 %
Unclassified	root	N/A	7.74 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	3.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.79 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.19 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.60 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.60 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.60 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7.74 %
Unclassified	root	N/A	7.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.79 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.19 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.60 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.60 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.60 %

Name	Rank	Taxonomy	Distribution
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	7.74 %
Unclassified	root	N/A	7.74 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	2.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.79 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.19 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.60 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.60 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	7.74 %
Unclassified	root	N/A	7.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.79 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.19 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1.19 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.19 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.60 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.79 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.19 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1.19 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.19 %
Desulfosarcina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina	0.60 %
Paraburkholderia tuberum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tuberum	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.79 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.19 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1.19 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.19 %
Desulfosarcina ovata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina ovata	0.60 %
Paraburkholderia tuberum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tuberum	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918004\|FACENC_F56XM5W01AWNAO	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300000955\|JGI1027J12803_101379790	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300000955\|JGI1027J12803_105242006	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300000956\|JGI10216J12902_116630107	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300003373\|JGI25407J50210_10109737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	681	Open in IMG/M
3300004633\|Ga0066395_10750425	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005177\|Ga0066690_10635138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	712	Open in IMG/M
3300005178\|Ga0066688_10075009	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300005178\|Ga0066688_10599628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	708	Open in IMG/M
3300005187\|Ga0066675_10679387	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300005295\|Ga0065707_10160027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1572	Open in IMG/M
3300005332\|Ga0066388_101676100	All Organisms → cellular organisms → Bacteria → Proteobacteria	1123	Open in IMG/M
3300005332\|Ga0066388_104269680	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300005338\|Ga0068868_102322452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	512	Open in IMG/M
3300005341\|Ga0070691_11104748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	500	Open in IMG/M
3300005440\|Ga0070705_101305628	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005459\|Ga0068867_101641053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	602	Open in IMG/M
3300005471\|Ga0070698_100594728	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300005471\|Ga0070698_101764364	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300005536\|Ga0070697_100873945	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300005546\|Ga0070696_101852397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tuberum	522	Open in IMG/M
3300005557\|Ga0066704_10467723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	833	Open in IMG/M
3300005557\|Ga0066704_11001395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	516	Open in IMG/M
3300005617\|Ga0068859_101696901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	698	Open in IMG/M
3300005713\|Ga0066905_101903496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	550	Open in IMG/M
3300005719\|Ga0068861_102677697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	503	Open in IMG/M
3300005764\|Ga0066903_101534629	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300005764\|Ga0066903_106966896	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005764\|Ga0066903_108661573	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005844\|Ga0068862_101459151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	689	Open in IMG/M
3300005983\|Ga0081540_1265856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	595	Open in IMG/M
3300006173\|Ga0070716_101855365	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006194\|Ga0075427_10116211	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300006796\|Ga0066665_10981955	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300006797\|Ga0066659_10134961	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300006844\|Ga0075428_101849751	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300006847\|Ga0075431_100574317	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300006852\|Ga0075433_10355821	All Organisms → cellular organisms → Bacteria → Proteobacteria	1294	Open in IMG/M
3300006853\|Ga0075420_101754938	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300006853\|Ga0075420_101894708	Not Available	510	Open in IMG/M
3300006871\|Ga0075434_101643373	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006880\|Ga0075429_100056500	All Organisms → cellular organisms → Bacteria	3416	Open in IMG/M
3300006880\|Ga0075429_101081755	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300006880\|Ga0075429_101957304	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300006904\|Ga0075424_101426064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina ovata	735	Open in IMG/M
3300009012\|Ga0066710_104861010	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300009036\|Ga0105244_10298689	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300009038\|Ga0099829_11039514	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300009088\|Ga0099830_11118262	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300009090\|Ga0099827_10481632	Not Available	1065	Open in IMG/M
3300009090\|Ga0099827_11920634	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300009100\|Ga0075418_10695716	Not Available	1096	Open in IMG/M
3300009100\|Ga0075418_10821946	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300009100\|Ga0075418_11677589	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300009157\|Ga0105092_10154995	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300009162\|Ga0075423_10350616	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1548	Open in IMG/M
3300009168\|Ga0105104_10009404	All Organisms → cellular organisms → Bacteria	6278	Open in IMG/M
3300009168\|Ga0105104_10802271	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300009792\|Ga0126374_10986103	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300009806\|Ga0105081_1090134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	508	Open in IMG/M
3300009820\|Ga0105085_1032691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	921	Open in IMG/M
3300010041\|Ga0126312_10926511	Not Available	636	Open in IMG/M
3300010042\|Ga0126314_10666427	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300010043\|Ga0126380_11535174	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300010043\|Ga0126380_11649562	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300010046\|Ga0126384_11238920	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300010047\|Ga0126382_10434933	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300010047\|Ga0126382_11350422	Not Available	647	Open in IMG/M
3300010047\|Ga0126382_12391479	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300010048\|Ga0126373_12940305	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300010166\|Ga0126306_11750537	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300010358\|Ga0126370_11171438	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300010358\|Ga0126370_11655888	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300010359\|Ga0126376_10545732	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300010360\|Ga0126372_13185662	Not Available	510	Open in IMG/M
3300010361\|Ga0126378_12026213	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300010361\|Ga0126378_13159316	Not Available	524	Open in IMG/M
3300010362\|Ga0126377_10959479	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300010366\|Ga0126379_10585892	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1199	Open in IMG/M
3300010366\|Ga0126379_10877210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	999	Open in IMG/M
3300011270\|Ga0137391_10211435	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300012199\|Ga0137383_10583866	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300012200\|Ga0137382_10327310	All Organisms → cellular organisms → Bacteria → Proteobacteria	1072	Open in IMG/M
3300012202\|Ga0137363_10774158	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300012206\|Ga0137380_10827918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	798	Open in IMG/M
3300012206\|Ga0137380_11632561	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	529	Open in IMG/M
3300012209\|Ga0137379_11573185	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300012212\|Ga0150985_102248615	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300012212\|Ga0150985_110871819	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300012469\|Ga0150984_111398942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	997	Open in IMG/M
3300012469\|Ga0150984_123572162	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300012473\|Ga0157340_1021472	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012507\|Ga0157342_1017013	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300012582\|Ga0137358_10396220	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300012582\|Ga0137358_10896337	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300012923\|Ga0137359_10182465	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1874	Open in IMG/M
3300012929\|Ga0137404_11021302	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300012930\|Ga0137407_11271776	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300012948\|Ga0126375_10834145	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300012948\|Ga0126375_11386377	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012948\|Ga0126375_11789563	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012948\|Ga0126375_11824499	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300012971\|Ga0126369_12839961	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012989\|Ga0164305_10802003	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300013306\|Ga0163162_10156686	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300014326\|Ga0157380_13120146	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300014487\|Ga0182000_10282778	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300015264\|Ga0137403_10004760	All Organisms → cellular organisms → Bacteria	15911	Open in IMG/M
3300015264\|Ga0137403_10828736	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300015264\|Ga0137403_11451499	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300015371\|Ga0132258_13847447	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300015372\|Ga0132256_103424011	Not Available	533	Open in IMG/M
3300015373\|Ga0132257_100755703	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300015373\|Ga0132257_104469245	Not Available	509	Open in IMG/M
3300015374\|Ga0132255_103790336	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300016387\|Ga0182040_11185632	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300016387\|Ga0182040_11279132	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300018056\|Ga0184623_10170479	All Organisms → cellular organisms → Bacteria → Proteobacteria	1004	Open in IMG/M
3300018465\|Ga0190269_11572452	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300018466\|Ga0190268_11925703	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300018482\|Ga0066669_11784556	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300018482\|Ga0066669_12239477	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300021073\|Ga0210378_10259194	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300021081\|Ga0210379_10239968	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300025910\|Ga0207684_10266023	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300025922\|Ga0207646_11456956	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300025927\|Ga0207687_10273967	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300025933\|Ga0207706_11373564	Not Available	581	Open in IMG/M
3300026023\|Ga0207677_10955833	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300026075\|Ga0207708_11122971	Not Available	686	Open in IMG/M
3300026089\|Ga0207648_11135223	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300026118\|Ga0207675_101649943	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300026118\|Ga0207675_101975362	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300026328\|Ga0209802_1208302	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300026340\|Ga0257162_1029424	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300026497\|Ga0257164_1053392	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300026532\|Ga0209160_1148884	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300027646\|Ga0209466_1027959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1160	Open in IMG/M
3300027718\|Ga0209795_10146178	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300027874\|Ga0209465_10322781	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300027880\|Ga0209481_10661648	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300027907\|Ga0207428_10880503	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300027909\|Ga0209382_11458529	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300028589\|Ga0247818_10747403	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300031122\|Ga0170822_13591835	Not Available	565	Open in IMG/M
3300031740\|Ga0307468_102092200	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300031858\|Ga0310892_11319774	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300031911\|Ga0307412_11928516	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031912\|Ga0306921_12109495	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300031945\|Ga0310913_10815223	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300031947\|Ga0310909_10101351	All Organisms → cellular organisms → Bacteria	2314	Open in IMG/M
3300031947\|Ga0310909_10940121	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300031947\|Ga0310909_11586681	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300032000\|Ga0310903_10203673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	928	Open in IMG/M
3300032005\|Ga0307411_11424960	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300032035\|Ga0310911_10797631	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300032180\|Ga0307471_100969183	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300032205\|Ga0307472_102729364	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300032261\|Ga0306920_101943019	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300032782\|Ga0335082_11337602	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300033004\|Ga0335084_11608068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	640	Open in IMG/M
3300033550\|Ga0247829_11554394	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300033551\|Ga0247830_11602415	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300034147\|Ga0364925_0260210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	646	Open in IMG/M
3300034660\|Ga0314781_088104	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300034663\|Ga0314784_149954	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300034667\|Ga0314792_179252	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.43%
Host-Associated	Host-Associated	28.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.86%
Plants	Host-Associated → Plants	28.57%
Aquatic	Environmental → Aquatic	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.07%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.31%
Freshwater	Environmental → Aquatic → Freshwater	2.98%
Sediment	Environmental → Aquatic → Sediment	0.60%
Floodplain	Environmental → Terrestrial → Floodplain	0.60%
Roots	Host-Associated → Plants → Roots	0.60%
Phylloplane	Host-Associated → Plants → Phylloplane	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.69%
Loam	Environmental → Terrestrial → Soil → Loam	11.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.19%
Sand	Environmental → Terrestrial → Soil → Sand	1.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.60%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.19%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.60%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.19%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.19%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.19%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.19%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.19%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.19%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.60%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.60%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.60%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918004	Soil microbial communities from sample at FACE Site 2 North Carolina CO2-	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012473	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCA_1884790	2035918004	Soil	MTDNNGYVLAPLLVAPVNETDMVLLPKGLQALKQVAKEVGLDLRGAY
JGI1027J12803_1013797902	3300000955	Soil	VLAPVPVAPVNETDMVLFPEGLKALKQVAKEVGVDLKGSY*
JGI1027J12803_1052420061	3300000955	Soil	EKGEKVIAMTDNNGYV*APVPVAPVNETEMVLFPDGLKALKRVAKEVGLDLRGA
JGI10216J12902_1166301071	3300000956	Soil	VLAPLPVAPVNEADMVLLPQGLQALKKVAKEIGVDLRGAYLNL
JGI25407J50210_101097372	3300003373	Tabebuia Heterophylla Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLNALKQVAKEVGLDLRG
Ga0066395_107504252	3300004633	Tropical Forest Soil	MTDNHGYVLAPLPVAPVNETDMVLLPKGLHALKQVAKEVGLDLR
Ga0066690_106351382	3300005177	Soil	MTDNNGYVLAPLPVAPVNETDIALFPEGLKALKKVAKEVGLDLRGAYVNLDGGFDSR
Ga0066688_100750094	3300005178	Soil	MTDNHGYVLAPLPVAPVNETDIVLLPKGLKALKQVAKEVDLDLRGAYVNLDG
Ga0066688_105996282	3300005178	Soil	MTDNNGYVLAPLPVAPVNETDMVLLPEGLHALKQVAKEVGLDLRGAYVNLDGGFD
Ga0066675_106793871	3300005187	Soil	MTDNNGYVLAPLPVAPVNETDMVLLPKGLNALKQVAKEVGLDLR
Ga0065707_101600274	3300005295	Switchgrass Rhizosphere	MTDNNGYVLAPVPVAPVNETDMVLFPDGLKALKRVAKEVGLDLTGA*
Ga0066388_1016761004	3300005332	Tropical Forest Soil	VLAPVPVAPVNETDMVLLPQGLKALKQVAKEVGLDLKGAYLNLDGGFDS
Ga0066388_1042696803	3300005332	Tropical Forest Soil	MTDNHGYVLAPLPVAPVNETDMVLLPKGLTALKQVAKEVGLD
Ga0068868_1023224521	3300005338	Miscanthus Rhizosphere	VLAPVPVAPVNETDMVLLPESLQALKKVAKDVGLDLRGAYLNLDGGFDSAH
Ga0070691_111047481	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKALTALKQVAKEVGLDLRG
Ga0070705_1013056281	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTDNHGYVLAPLPVAPINETDMVLFPEGLKALKKVAKEVG
Ga0068867_1016410532	3300005459	Miscanthus Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLTALKQVAKEVGLDLRGAYGNL
Ga0070698_1005947281	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLAPVPVAPVNATDMVLLPDGLKALKRVAKEVGLDLKGAYLHL
Ga0070698_1017643641	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTDNNGYVLALLPVAPVNETDMVLLPQGLQALKKLAKKVGLDLRGASLNLDGGFDS
Ga0070697_1008739451	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLHALKQVAKEVGLDLRG
Ga0070696_1018523971	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTENQGYVLAPVPVAPVNETDMVLFPEGLKALKQVAKEVGLDLRGAYLNLDGGFDS
Ga0066704_104677231	3300005557	Soil	IIAITDNNGDVLSPCPVAPVNETDMVLLPDGLKALKDVAKKTGFVLEGAYLN*
Ga0066704_110013952	3300005557	Soil	MTDNNGYVLAPLPVAPVNETDIVLFPEGLKALKKVAKEVGLDLRGAYVNLD
Ga0068859_1016969011	3300005617	Switchgrass Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLTALKQVAKEVGLDLRGAYVNLDG
Ga0066905_1019034961	3300005713	Tropical Forest Soil	MTDNHGYVLAPLPVAPVNETDMVLLPESLKALKKVAKEVGLDLR
Ga0068861_1026776971	3300005719	Switchgrass Rhizosphere	MTENQGYVLAPVPVAPVNETDMVLFPEGLKALKKVAKEVGLDLKGAYLNLDG
Ga0066903_1015346293	3300005764	Tropical Forest Soil	MTDNHGSVLAPVPVAPVHETDMVLFPDGLKALKRVAKEVGLDLRGA
Ga0066903_1069668962	3300005764	Tropical Forest Soil	MTENQGYVLAPVPVAPVNETDMVLFPEGLKALKKVTKEVG
Ga0066903_1086615731	3300005764	Tropical Forest Soil	MTDNNGYVLAPLPVAPVNETDMVLLPKGLHALKQVAKEVGLDLR
Ga0068862_1014591512	3300005844	Switchgrass Rhizosphere	MTDNNGYVLAPLPVAPVNETDMVLFPEGLKALKQVAKEVGLDLRGAYVN
Ga0081540_12658561	3300005983	Tabebuia Heterophylla Rhizosphere	MTDNNGYVLAPLPVAPVNETDMVLLPKGLNALKQVAKEVGLDLRGAYVNLDGGFDSQAN
Ga0070716_1018553652	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSITDNNGYVLSPMPVAPVNEADMVLLPDGLRSLKLVAKMV
Ga0075427_101162112	3300006194	Populus Rhizosphere	VLAPVPVAPVNETDMVLLPEGLQALKRVAQEVGVDLRGAYLNLD
Ga0066665_109819551	3300006796	Soil	MTDNNGYVLAPLPVAPVNETDMVLLPKGLQALKQVAKEVGLDL
Ga0066659_101349611	3300006797	Soil	MSDNNGYVLAPLPVAPVNETDMVLLPEGLKALKKVAKEVGLDLRGA*
Ga0075428_1018497512	3300006844	Populus Rhizosphere	MENHGYVLAPLPVAPVNETDMVLLPESLQALKRVAKQV
Ga0075431_1005743171	3300006847	Populus Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLQALKQVAKEVGL
Ga0075433_103558213	3300006852	Populus Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLFPEGLKALKKVAKEVGLDLRGAYVNLDGGFDSRAN
Ga0075420_1017549381	3300006853	Populus Rhizosphere	MTDNHGSILAPLPVASVNETDMVLLPKGLHALQQGAKEVGLDLRGVDVHLDGGFDA
Ga0075420_1018947081	3300006853	Populus Rhizosphere	DNDGSVLAPVPVAPGNETDMVLLPKGLQALKKVAKEVG*
Ga0075434_1016433732	3300006871	Populus Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLNALKQV
Ga0075429_1000565001	3300006880	Populus Rhizosphere	MTDNNGYVLAPLPVAPVNETDMVLLPKGLQALKQVAKEVG
Ga0075429_1010817552	3300006880	Populus Rhizosphere	MTDNHGYVLAPLPVAPVNETDIVLFPEGLKALKKVAKEVGLDLRGAYVNLDGGFDS
Ga0075429_1019573041	3300006880	Populus Rhizosphere	MTDNHGSVLAPVPVAPVNETEMVLFPDGLKALKRVAKEVGLDLRGA
Ga0075424_1014260641	3300006904	Populus Rhizosphere	LDTLFPDVNLAPVPVAPVNETDMVLLPESLHALKQVAKEVH*
Ga0066710_1048610102	3300009012	Grasslands Soil	MTDNNGYGLAPLPVAPVNETDMVLLPKGLQALKQVAKEVGLDLRDAYV
Ga0105244_102986891	3300009036	Miscanthus Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLTALKQVAKEVGLDLRGAYVN
Ga0099829_110395141	3300009038	Vadose Zone Soil	MTDNNGYVLAPLPVAPVNETDMVLLPEGLHALKQVATEVGVDLRGA*
Ga0099830_111182621	3300009088	Vadose Zone Soil	VLAPLSVAPVDETDRVLLPQGLKALKQVAKQVGLDLR
Ga0099827_104816322	3300009090	Vadose Zone Soil	MFPDSLLAPVPVAPVNETDMVLLPESLKALKKVAKEVGLDLRGAYL
Ga0099827_119206341	3300009090	Vadose Zone Soil	MTDNHGSVLAPLPVAPVNATDMVLVPKGLKALKQVAKEVGLDLRGAYVNLDGG
Ga0075418_106957161	3300009100	Populus Rhizosphere	MAPLPVAPVNETDMVLLPKGLHALKQVAKEVGLGLRGAY
Ga0075418_108219461	3300009100	Populus Rhizosphere	MTDNNGYVLSPLPVAPVNETDMVLLPDGLKALKRVAKMVGLDLRGAY
Ga0075418_116775892	3300009100	Populus Rhizosphere	MTDNNGYVLAPLPVAPVNETDMVLLPKSLNALKQVAQEVGLDLRGAYVNL
Ga0105092_101549953	3300009157	Freshwater Sediment	MTDNHGYVLAPLPVAPVNETDMALLPKGLQALKKLAKKVGLDLRGAYLNLD
Ga0075423_103506161	3300009162	Populus Rhizosphere	VITSTDNDGSVLAPVPVAPGNETDMVLLPKGLQALKKVAKEVG*
Ga0105104_1000940412	3300009168	Freshwater Sediment	MTDNHGYVLAPLPVAPVNETDMALLPKGLQALKKLAKKVGLD
Ga0105104_108022711	3300009168	Freshwater Sediment	MTDNNGYVLSPLPVAPVNETDMILLPEGLKALKRVAKTVGLTLTGAYLNLDAGF
Ga0126374_109861032	3300009792	Tropical Forest Soil	MTDNNGFVLAPLPVAPVNKTDMVLLPEGLKALKKVAKEV
Ga0105081_10901341	3300009806	Groundwater Sand	MTDNNGYVLAPLPVAPVNETDMVLLPKGLNALKQVAKEVGLDLRGAYVNL
Ga0105085_10326911	3300009820	Groundwater Sand	PVPVAPVNETDIVLLPESLKALKQVATEVGLDLKGACLNLDGGFDSTYNRKLVD*
Ga0126312_109265111	3300010041	Serpentine Soil	KGEKVIAITDNHGYVLSPLPVAPVNETDMVLLPEGLKALKRVAKTVGLTLEQFYALAA*
Ga0126314_106664271	3300010042	Serpentine Soil	MTENQGYVLAPVPVAPVNETDMVLFPEGLNALKQVAKEVGLDLRGAYVNLDGGFD
Ga0126380_115351741	3300010043	Tropical Forest Soil	VLAPVPVAPVNETDMVLFPEGLKALKDVAKEVGLDLRGAYCHLDGGFDSTYNRKCI
Ga0126380_116495622	3300010043	Tropical Forest Soil	MTDNHGYVLAPLPVAPINETDMVLLPKGLQALKQVAKEV
Ga0126384_112389203	3300010046	Tropical Forest Soil	MTDNNGSVLAPVPVAPVNETDMVLFPDGLKALKRVAKEVGLDLRGAYVNLDGGFDSR
Ga0126382_104349333	3300010047	Tropical Forest Soil	MTDNQGSIISPCPVASVNETDMILLPEGLKALKRVAKTVGLELGGAYLNL
Ga0126382_113504222	3300010047	Tropical Forest Soil	MTDNNGDVWSPLPVAPVHETAMLLLPDSLNALKQAAKMTGLVLTGAYRNLDSGFDSMHNRQYIFMPA*
Ga0126382_123914791	3300010047	Tropical Forest Soil	MTDNHGHVLSPLPVAPVNETDMVLLPKGLQALKQVAKQVGLDLRGAYLNLDAG
Ga0126373_129403052	3300010048	Tropical Forest Soil	MTDNNGYVLAPLPVAPVNETDMVLFPDGLKALKRVAKEVGLDLRGAYVNLDGGFDSR
Ga0126306_117505372	3300010166	Serpentine Soil	MTDNHGYVLAPLPVAPVNETDMALLPKGLQALKKVAQQGELDLRGAYLNLDGGF
Ga0126370_111714381	3300010358	Tropical Forest Soil	MTENQGYVLAPVPVAPGNETDMVLFPEGLQALKKVAKEVGLDLKGAYLNLDGGFDSA
Ga0126370_116558883	3300010358	Tropical Forest Soil	MTDNNGFVLAPLPVAPVNKTDMVLLPEGLKALKKVAKEVGLDLR
Ga0126376_105457321	3300010359	Tropical Forest Soil	MTDNNGYVLAPLPVAPVNETDMGLLPEGLHALKQVAK
Ga0126372_131856621	3300010360	Tropical Forest Soil	MTATHGSVCAPVPVAPVHETARGLFPEGRHALQRVAQEVGLDLRGA
Ga0126378_120262133	3300010361	Tropical Forest Soil	MTDNNGYVLAPLPVAPVNETDMVLLPKGLHALKQVAKEVGLDL
Ga0126378_131593162	3300010361	Tropical Forest Soil	MTDNHGDVLAPLPVAPVNETDMVLFPESLKALQKVA
Ga0126377_109594793	3300010362	Tropical Forest Soil	MTDNHGDVLSPLPVAPVNETDMVLLPEGRQAFKKVAQQVSLDRRDAYVNLD
Ga0126379_105858921	3300010366	Tropical Forest Soil	IAIIDNHGYVLAPVPVVPVNETDMVLLTEGLKGLKEVAKEVGLDVRDV*
Ga0126379_108772101	3300010366	Tropical Forest Soil	MLAPLPVAPVNETDMVLLPKELTALKQVAKEVGLDLRGA
Ga0137391_102114353	3300011270	Vadose Zone Soil	MTDNNGYVLAPLPVAPVNTADMVLFPEGLKALKKVAK
Ga0137388_117675881	3300012189	Vadose Zone Soil	MAITDNNGYVLSPMPVAPVNEADMVLLPDGLKSLKLVAKMVGVILVGAYLNLDCGFDSKQNRKI
Ga0137383_105838662	3300012199	Vadose Zone Soil	MIAITDKHGYVLSPCPVAPVNETDMILLPEGLKALKRVAQLVGLDLG
Ga0137382_103273103	3300012200	Vadose Zone Soil	MTDNNGYVLAPLPMAPVNETDMILLPQGLKALKQVAEQVGLDLRGAYLNLDGGFDST
Ga0137363_107741583	3300012202	Vadose Zone Soil	MTDNHGYVLAPLPVAPVNETDMVLLPEGLHALKQVATEVGVDLRGA*
Ga0137380_108279181	3300012206	Vadose Zone Soil	MGNAQVNEADTVLLPKGLKALKRVAKLTGFELQGA
Ga0137380_116325612	3300012206	Vadose Zone Soil	MTDNPGDVLSPLPVAPVNQTDMVLFPEGLQTLKRVAKQTGLVLTGA*
Ga0137379_115731852	3300012209	Vadose Zone Soil	MTDNNGYVLAPLPVAPVNETDMVLLPKGLNALKQVAKEVGLDLRG
Ga0150985_1022486152	3300012212	Avena Fatua Rhizosphere	MTDNHGDVLSPCPGAPVHETEMILLPEGLKALKKVAKQVG*
Ga0150985_1108718192	3300012212	Avena Fatua Rhizosphere	MTDNNGYVLAPLPVAPVNETDMVLLPKGLHALKQVAKEVGLDLRGAYVNLDGGFDSNR*
Ga0150984_1113989422	3300012469	Avena Fatua Rhizosphere	MTDNHGDVLSPCPVAPVHETDMILLPEGLKALKKVAKQVG*
Ga0150984_1235721621	3300012469	Avena Fatua Rhizosphere	MTDNHGYIISPCSVAPVNETDMILLPEGLKALKRVAKTVGLDLGGAYLNLDAGFD
Ga0157340_10214722	3300012473	Arabidopsis Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLQALKQVAKEVGLDLRGAYVNLDG
Ga0157342_10170133	3300012507	Arabidopsis Rhizosphere	VAPVNETDMVLLPESLHALKQVAKEVGLDLRGAYL
Ga0137358_103962201	3300012582	Vadose Zone Soil	MTDNNGYVLSPLPVAPVHETDMILLPEGLNALKRVAKTVGLTRTGAYLNLDAGFDA
Ga0137358_108963371	3300012582	Vadose Zone Soil	MTDNHGYVLAPLPVAPVNETDMVLLPEGLHALKQVATEVG
Ga0137359_101824651	3300012923	Vadose Zone Soil	MTDNHGYVLAPLPVAPVNETDMVLLPEGLHALKQVATEVGVDLRGAEVN
Ga0137404_110213022	3300012929	Vadose Zone Soil	MTDNHGDRLSAFPVAPVNATDMVRLPEGRNALKKVATMVGLDLGGAYLNLDAGFDST
Ga0137407_112717761	3300012930	Vadose Zone Soil	MTDNHGDVLSPLPVAPVHETDMVLLPEGRKALKKVATQVGLDLRDAYVNLDA
Ga0126375_108341452	3300012948	Tropical Forest Soil	MTDNNGYVLSPLPVAPVHETAMVLLPNGLKALKRVAKIVGVD
Ga0126375_113863772	3300012948	Tropical Forest Soil	MTENQGYVLAPVPVAPVNETDMLLFPEGLKALKKVAKEVGVDLQ
Ga0126375_117895631	3300012948	Tropical Forest Soil	VLAPVPVAPVNETDMVLFPEGLKALKDVAKEVGLDLRGAYCHLDGGFD
Ga0126375_118244991	3300012948	Tropical Forest Soil	MTDNNGYVLAPLPVAPVNETDMVLLPKGLNVLKQVAKEVGLDLRGA
Ga0126369_128399611	3300012971	Tropical Forest Soil	MTDNNGYVLAPLPVAPVNETDMVLLPEGLKALKKVAKEVGLD
Ga0164305_108020031	3300012989	Soil	MTDNHGDMLSAFPVAPVNATEMVLLPEGLKAVKQVAKMV
Ga0163162_101566866	3300013306	Switchgrass Rhizosphere	MTENQGYVLAPVPVAPVNETDILLFPEGLKALKKVTKEVGVDLQGAYLTNPAMTDSVG*
Ga0157380_131201462	3300014326	Switchgrass Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLTALKQV
Ga0182000_102827781	3300014487	Soil	MTDNNGYVLAPVPVAPVNETDMVLFPDGLQALKRVATEVGLDLRGADVNLDGG
Ga0137403_100047601	3300015264	Vadose Zone Soil	MTDNHGDVLSPLPVAPVNETDMVLLPEGLQALKKVATQVGLDLRDAYVNLDAGFD
Ga0137403_108287362	3300015264	Vadose Zone Soil	MTDNHGDRLSAFPVAPVNATDMVRLPEGRNALKKVATMVGLDLGRAYLN
Ga0137403_114514991	3300015264	Vadose Zone Soil	MTDNNGYVLAPLPVAPVNETDMVLLPKGLNALKQVAKEVGLDLRGAYVNLDG
Ga0132258_138474471	3300015371	Arabidopsis Rhizosphere	MTDNNGYVLAPLPVAPVNETDMVLLPEGLKALKEVAKEV
Ga0132256_1034240111	3300015372	Arabidopsis Rhizosphere	QKGDKVIAIIDNHGYVLAPVPVAPVNETNMVLLPESLQALKKVAKEVGLDLRGAY*
Ga0132257_1007557034	3300015373	Arabidopsis Rhizosphere	DHHGYVLAPVPVAPVNETDMVLFPEGLKALKKVAKEVSVDLRGA*
Ga0132257_1044692451	3300015373	Arabidopsis Rhizosphere	MIAQPYPRKKGDKVIAITDNHGYACPPVPVAPVNETDMVLLPESLHALKQVAKEVGLDLRGA*
Ga0132255_1037903361	3300015374	Arabidopsis Rhizosphere	MTDNNGYVLAPVPVAPVNETDMVLLPQGLKALKQVAKQVG
Ga0182040_111856322	3300016387	Soil	MTDNNGYVLAPLPVAPINETDMVLLPEGLKALKKVAKEVGLD
Ga0182040_112791321	3300016387	Soil	MTDNNGYVLAPLPVAPVNETDMVLLPKGLHALKQVAKEVGL
Ga0184623_101704791	3300018056	Groundwater Sediment	VLAPVPVAPVNEADMVLLPKGLKALKQVAKEVGLDLRG
Ga0190269_115724521	3300018465	Soil	VSILSIDNHGYVLAPVAVAPVNETDMVLFPEGLKALKEVAKE
Ga0190268_119257031	3300018466	Soil	MTDNNGYVLSPLPVAPVNETDMVLLPDGLNALKKVAKQVSLDLRDAYVNL
Ga0066669_117845561	3300018482	Grasslands Soil	MAITDNNGYVLSPMPVAPVNEADMVLLPDGLNILKLVAKMVGLI
Ga0066669_122394771	3300018482	Grasslands Soil	VLSPLPVAPVNKSDMVLLADGLKALKMVAKMIGLVLVGAYLNLDSGFVSK
Ga0210378_102591941	3300021073	Groundwater Sediment	KVIAIIDNHGYVLAPVPVAPVNETDMILLPKGLKALQQVAKKVGLDLRGA
Ga0210379_102399683	3300021081	Groundwater Sediment	MTAKNGDVLAPGPVAPVHETAMVLLPDGLKALKDVAQKTGFVLEGAYLNLDGG
Ga0207684_102660231	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAMTDNHGYGLAPLPVAPVHQTDMVLFPEGLKALKQVAKKVGLHLKGAYVNLDGGFDSKHNRKLI
Ga0207646_114569562	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAIIDNHGYVLAPVPVAPVNETDMVLLPQGLQALKQVAKEVGL
Ga0207687_102739671	3300025927	Miscanthus Rhizosphere	MSNGYVLAPLPVAPVNETDMVLLPKGLQALKQVAKEV
Ga0207706_113735642	3300025933	Corn Rhizosphere	AIAITDNNGDGLAPLHVAPVNETALVLLPQGLKAWKQVAKKGA
Ga0207677_109558331	3300026023	Miscanthus Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLTALKQVAK
Ga0207708_111229711	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSFWTIREKVIAMTDNHGYVLAPLPVAPVNETDLVLLPKGLHALKQVATEVGLGLRGA
Ga0207648_111352231	3300026089	Miscanthus Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLTALKQVAKEVGLDLRGAYGNLDGGF
Ga0207675_1016499431	3300026118	Switchgrass Rhizosphere	MTDNNGYVLAPLPVAPVNETDMVLLPKGLHALKQVAKEVGLDLRGAYVN
Ga0207675_1019753622	3300026118	Switchgrass Rhizosphere	MTDNNGYVLAPLPVAPVNETDMVLLPKGLNALKQVATEVGLDLRGAY
Ga0209802_12083021	3300026328	Soil	MTDNNGYVLAPLPVAPVNETDMVLLPKGLQALKQVAKEVGLDLRGAY
Ga0257162_10294241	3300026340	Soil	MDNHGSVLAPVPVAPVNETDMVLLPESLQALKKVAKEVGLDLRGAYLNLDGGFDSAHN
Ga0257164_10533921	3300026497	Soil	MTDHHGSVLAPLPVAPVNETDMVLLPEGLPALKQVATEVGVDLRGAEVNLDGGFDARAN
Ga0209160_11488841	3300026532	Soil	MTDNNGYVLAPLPVAPVNETDMVLLPEGLHALKQVAKEVGLDLRG
Ga0209466_10279591	3300027646	Tropical Forest Soil	ANPGYILAPVPVAPVNETDLVLFPQGLHALKQVAKQVGLDLRGASEPR
Ga0209795_101461782	3300027718	Agave	MTDNNGYVLAPLPVAPVNETDMVLLPKGLKALKQVAKEVGLDLRGA
Ga0209465_103227813	3300027874	Tropical Forest Soil	MTDNNGYVLAPLPVAPVNETDMVLLPKGLTALKQVAKEV
Ga0209481_106616482	3300027880	Populus Rhizosphere	VLAPVPVAPVNATDMVLFPEGLKALQDVATEVGLDLRGAYLHR
Ga0207428_108805031	3300027907	Populus Rhizosphere	MTDNNGYVLAPVPVAPVNETDMVLFPDGLKALKRVAKEVGLD
Ga0209382_114585291	3300027909	Populus Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLQALKQVAKEVGLDLRGAS
Ga0247818_107474032	3300028589	Soil	MTDNHGYVLAPLPVAPVNETDMLLLPEGLKALKQVAKEVGLDLRGAYVNLDGGFDSR
Ga0170822_135918351	3300031122	Forest Soil	MVDNNGFVLAPLPVAPVNETDTVLLPEGLNTLKRVARLTALKIGGSYLNLDGGFDS
Ga0307468_1020922002	3300031740	Hardwood Forest Soil	MTDNNGYVLAPLPVAPVNETDMVLFPEGLKALKKVAKEVGLDLRGAYVNLDGGFD
Ga0310892_113197741	3300031858	Soil	MTDNHGYVLAPVPVAPVNETDMVLLPESLQALKKVAKEVGLDLRGAHLNLDGG
Ga0307412_119285161	3300031911	Rhizosphere	MTDNHGYVLAPLPVAPVNETDMVLLPKGLHALKQVAKEVGLDL
Ga0306921_121094951	3300031912	Soil	MTDNHGYVLAPLPVAPVNETDMILLPKGLHALKQVAKEVGLDLRGAYVNLDGGFDSR
Ga0310913_108152232	3300031945	Soil	MTDNNGYVLAPLPVAPVNETDMVLLPEGLKALKQVAKEVGLDLRGA
Ga0310909_101013513	3300031947	Soil	VPFYEKFRLAPVPVAPVNETDMVLLPEGLKALKQVAKEAGVDLRG
Ga0310909_109401211	3300031947	Soil	MTDNNGYVLAPLPVAPVNETDMVLLPEGLKALKKVAKEVGLDLRGAYVNL
Ga0310909_115866812	3300031947	Soil	MTDNHGDVLAPLPVAPVNETDMVLFPESLKALQKVAQEVGLDLRGAS
Ga0310903_102036731	3300032000	Soil	MTDNHGYVLAPLPVAPVNETDMVLLPKGLTALKQVAKEVGLDLRG
Ga0307411_114249602	3300032005	Rhizosphere	MTDNNGYVLAPLPVAPVNETDMVLLPKGLHALKQVAKEVGLDLRDAYVNLDGGFDSS
Ga0310911_107976311	3300032035	Soil	MTDNNGYVLAPLPVAPVNETDMVLLPEGLKALKKVAKEV
Ga0307471_1009691831	3300032180	Hardwood Forest Soil	MTENQGYVLAPVPVAPVNETDMVLFPEGLQALKKVAKE
Ga0307472_1027293641	3300032205	Hardwood Forest Soil	MTDNHGYVLAPLPVAPVNETDMVLLPKGLQALKQVAKEVGLDLRGAYVNLDGGFD
Ga0306920_1019430191	3300032261	Soil	MTDNNGYVLAPLPVAPVNETDMVLLPEGLKALKQVAKEVGLDLRG
Ga0335082_113376021	3300032782	Soil	MAITDHHGSVLALVPVAPVHETDMVLFPEGLKALKEVATEAGLDRRGAYRNLDGGCDSIH
Ga0335084_116080682	3300033004	Soil	LLYCGYVLAPLPVAPVNETDMVLFPEGLKALKKVAKEVGLDLRG
Ga0247829_115543941	3300033550	Soil	MTDNHGYVLAPLPVAPVNETDMVLLPKGLQALKQVAKEVGLDLR
Ga0247830_116024151	3300033551	Soil	MTDNHGYVVAPLPVAPVNETDMVLLPKGLNALKQVAKEVGLDLRGAYVNLDGGFDSRA
Ga0364925_0260210_483_644	3300034147	Sediment	MWAPLPVAPVNETDMVLLPKGLQTLKHVAKNVGVDLRGAYLNLDGGFDSTHNRK
Ga0314781_088104_3_158	3300034660	Soil	MTDNNGYVLAPLPVAPVNETDMVLLPKGLQALKQGAKEVGLDLRGADVNLDG
Ga0314784_149954_3_170	3300034663	Soil	MTDNNGYVLAPLPVAPVNETDMVLLPKGLNALKQVAKEVGLDLRGAYVNLDGGFDS
Ga0314792_179252_417_581	3300034667	Soil	MTDNNGYVLAPVPVAPVNETDMVLFPDGLKALKRVAKEVGLDLTGAYVNLDGGFD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037362

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences