Metagenome / Metatranscriptome Family F037600

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F037600
Family Type	Metagenome / Metatranscriptome
Number of Sequences	167
Average Sequence Length	45 residues
Representative Sequence	GSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Number of Associated Samples	111
Number of Associated Scaffolds	167

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.85 %
% of genes near scaffold ends (potentially truncated)	95.21 %
% of genes from short scaffolds (< 2000 bps)	86.23 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (65.868 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.323 % of family members)
Environment Ontology (ENVO)	Unclassified (55.689 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.287 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.63% β-sheet: 0.00% Coil/Unstructured: 94.37%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 167 Family Scaffolds
PF01436	NHL	22.16
PF00156	Pribosyltran	6.59
PF13424	TPR_12	5.39
PF03459	TOBE	4.79
PF07690	MFS_1	4.79
PF01475	FUR	2.99
PF13560	HTH_31	2.99
PF00583	Acetyltransf_1	1.80
PF03069	FmdA_AmdA	1.80
PF07394	DUF1501	1.80
PF08811	DUF1800	1.20
PF13701	DDE_Tnp_1_4	1.20
PF00144	Beta-lactamase	1.20
PF03976	PPK2	0.60
PF02635	DrsE	0.60
PF08445	FR47	0.60
PF08281	Sigma70_r4_2	0.60
PF13489	Methyltransf_23	0.60
PF13610	DDE_Tnp_IS240	0.60
PF00118	Cpn60_TCP1	0.60
PF08483	Obsolete Pfam Family	0.60
PF00011	HSP20	0.60
PF08450	SGL	0.60
PF01381	HTH_3	0.60
PF04909	Amidohydro_2	0.60
PF13751	DDE_Tnp_1_6	0.60
PF12836	HHH_3	0.60
PF12007	DUF3501	0.60
PF12840	HTH_20	0.60
PF13374	TPR_10	0.60
PF13340	DUF4096	0.60
PF00202	Aminotran_3	0.60
PF13193	AMP-binding_C	0.60
PF06850	PHB_depo_C	0.60

COG ID	Name	Functional Category	% Frequency in 167 Family Scaffolds
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	2.99
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	1.80
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.20
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.20
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.20
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	1.20
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.60
COG3243	Poly-beta-hydroxybutyrate synthase	Lipid transport and metabolism [I]	0.60
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.60
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.60
COG4553	Poly-beta-hydroxyalkanoate depolymerase	Lipid transport and metabolism [I]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.87 %
Unclassified	root	N/A	34.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.87 %
Unclassified	root	N/A	34.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.87 %
Unclassified	root	N/A	34.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.34 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	11.98 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.13 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.95 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	11.98 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.13 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	11.98 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.13 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	11.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.38 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.39 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1.20 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.60 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.13 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	11.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.38 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.59 %
unclassified Methylocystaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae	1.20 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.60 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.13 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	11.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.38 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.59 %
Methylocystaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	1.20 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.60 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig98678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	585	Open in IMG/M
3300004102\|Ga0058888_1011821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	795	Open in IMG/M
3300004120\|Ga0058901_1018720	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300004121\|Ga0058882_1827011	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1187	Open in IMG/M
3300005363\|Ga0008090_10102492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	907	Open in IMG/M
3300005554\|Ga0066661_10050768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2373	Open in IMG/M
3300005557\|Ga0066704_11032618	Not Available	507	Open in IMG/M
3300005560\|Ga0066670_11029992	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005598\|Ga0066706_10169013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1660	Open in IMG/M
3300005764\|Ga0066903_102674456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	968	Open in IMG/M
3300005872\|Ga0058710_1003149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	653	Open in IMG/M
3300006904\|Ga0075424_101798144	Not Available	648	Open in IMG/M
3300007265\|Ga0099794_10549580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	610	Open in IMG/M
3300009792\|Ga0126374_11528214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300010048\|Ga0126373_10583346	Not Available	1169	Open in IMG/M
3300010159\|Ga0099796_10062416	Not Available	1324	Open in IMG/M
3300010359\|Ga0126376_10438986	Not Available	1189	Open in IMG/M
3300010360\|Ga0126372_11324472	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300010360\|Ga0126372_11838010	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010376\|Ga0126381_101521433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	967	Open in IMG/M
3300010376\|Ga0126381_102044330	Not Available	825	Open in IMG/M
3300010376\|Ga0126381_102755956	Not Available	702	Open in IMG/M
3300010376\|Ga0126381_102908950	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300010376\|Ga0126381_104311044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	551	Open in IMG/M
3300010376\|Ga0126381_104889493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	515	Open in IMG/M
3300010376\|Ga0126381_105029384	Not Available	507	Open in IMG/M
3300010379\|Ga0136449_101233670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1173	Open in IMG/M
3300010398\|Ga0126383_10003488	All Organisms → cellular organisms → Bacteria → Proteobacteria	10408	Open in IMG/M
3300010398\|Ga0126383_10434175	Not Available	1358	Open in IMG/M
3300010398\|Ga0126383_11604439	Not Available	740	Open in IMG/M
3300010398\|Ga0126383_12490526	Not Available	602	Open in IMG/M
3300011269\|Ga0137392_11553209	Not Available	520	Open in IMG/M
3300012096\|Ga0137389_10414149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1151	Open in IMG/M
3300012189\|Ga0137388_10290133	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300012200\|Ga0137382_10610533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	779	Open in IMG/M
3300012211\|Ga0137377_10248433	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300012212\|Ga0150985_101495503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300012351\|Ga0137386_10175026	Not Available	1538	Open in IMG/M
3300012582\|Ga0137358_10767935	Not Available	642	Open in IMG/M
3300012685\|Ga0137397_10200317	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1485	Open in IMG/M
3300012944\|Ga0137410_10378803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	1136	Open in IMG/M
3300016270\|Ga0182036_10090832	All Organisms → cellular organisms → Bacteria → Proteobacteria	2049	Open in IMG/M
3300016270\|Ga0182036_10717143	Not Available	810	Open in IMG/M
3300016270\|Ga0182036_10937070	Not Available	711	Open in IMG/M
3300016319\|Ga0182033_10191792	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300016319\|Ga0182033_10503988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1040	Open in IMG/M
3300016319\|Ga0182033_11758382	Not Available	562	Open in IMG/M
3300016341\|Ga0182035_10099243	All Organisms → cellular organisms → Bacteria	2129	Open in IMG/M
3300016341\|Ga0182035_10236892	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300016357\|Ga0182032_10163925	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300016357\|Ga0182032_10296326	All Organisms → cellular organisms → Bacteria → Proteobacteria	1275	Open in IMG/M
3300016357\|Ga0182032_10555096	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300016357\|Ga0182032_11363781	Not Available	613	Open in IMG/M
3300016371\|Ga0182034_11362747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300016371\|Ga0182034_11392510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300016387\|Ga0182040_10285999	Not Available	1255	Open in IMG/M
3300016404\|Ga0182037_10045242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2904	Open in IMG/M
3300016404\|Ga0182037_10889090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300016404\|Ga0182037_11835340	Not Available	542	Open in IMG/M
3300016404\|Ga0182037_12090742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300016422\|Ga0182039_10220070	Not Available	1527	Open in IMG/M
3300016445\|Ga0182038_10079792	All Organisms → cellular organisms → Bacteria → Proteobacteria	2306	Open in IMG/M
3300016445\|Ga0182038_10627769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	930	Open in IMG/M
3300017932\|Ga0187814_10156405	Not Available	850	Open in IMG/M
3300017933\|Ga0187801_10105650	Not Available	1071	Open in IMG/M
3300017959\|Ga0187779_10446904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300017970\|Ga0187783_10568386	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300017975\|Ga0187782_10616226	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	834	Open in IMG/M
3300020579\|Ga0210407_10335909	Not Available	1181	Open in IMG/M
3300020580\|Ga0210403_10306357	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1301	Open in IMG/M
3300021170\|Ga0210400_11008454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300021406\|Ga0210386_11271741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
3300021420\|Ga0210394_11013496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300021476\|Ga0187846_10012287	All Organisms → cellular organisms → Bacteria	4098	Open in IMG/M
3300021560\|Ga0126371_11726628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	749	Open in IMG/M
3300022511\|Ga0242651_1000162	Not Available	3080	Open in IMG/M
3300022527\|Ga0242664_1105074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	584	Open in IMG/M
3300022527\|Ga0242664_1130736	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	540	Open in IMG/M
3300022528\|Ga0242669_1082974	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300022529\|Ga0242668_1092970	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	602	Open in IMG/M
3300022531\|Ga0242660_1132857	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	638	Open in IMG/M
3300022713\|Ga0242677_1022012	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	796	Open in IMG/M
3300022716\|Ga0242673_1026726	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	861	Open in IMG/M
3300022720\|Ga0242672_1010905	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1099	Open in IMG/M
3300022724\|Ga0242665_10281285	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300026316\|Ga0209155_1250222	Not Available	548	Open in IMG/M
3300026551\|Ga0209648_10688288	Not Available	558	Open in IMG/M
3300027846\|Ga0209180_10308707	Not Available	906	Open in IMG/M
3300027846\|Ga0209180_10362941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300030885\|Ga0265743_100273	Not Available	2000	Open in IMG/M
3300030969\|Ga0075394_11937264	Not Available	605	Open in IMG/M
3300031231\|Ga0170824_112536987	Not Available	1576	Open in IMG/M
3300031231\|Ga0170824_121799430	Not Available	801	Open in IMG/M
3300031474\|Ga0170818_109005648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	618	Open in IMG/M
3300031561\|Ga0318528_10566541	Not Available	610	Open in IMG/M
3300031564\|Ga0318573_10406830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	731	Open in IMG/M
3300031572\|Ga0318515_10321012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	830	Open in IMG/M
3300031573\|Ga0310915_10564288	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300031573\|Ga0310915_10613972	Not Available	770	Open in IMG/M
3300031573\|Ga0310915_11294696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300031679\|Ga0318561_10046393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2159	Open in IMG/M
3300031682\|Ga0318560_10053992	All Organisms → cellular organisms → Bacteria → Proteobacteria	1988	Open in IMG/M
3300031719\|Ga0306917_10189787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1550	Open in IMG/M
3300031719\|Ga0306917_10239360	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300031719\|Ga0306917_10819653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300031723\|Ga0318493_10315397	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300031736\|Ga0318501_10292479	Not Available	868	Open in IMG/M
3300031744\|Ga0306918_10243616	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300031744\|Ga0306918_10445115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1012	Open in IMG/M
3300031744\|Ga0306918_10862688	Not Available	706	Open in IMG/M
3300031744\|Ga0306918_11573602	Not Available	501	Open in IMG/M
3300031747\|Ga0318502_10977443	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300031763\|Ga0318537_10235948	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300031792\|Ga0318529_10615251	Not Available	504	Open in IMG/M
3300031793\|Ga0318548_10096148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1414	Open in IMG/M
3300031833\|Ga0310917_10057890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2398	Open in IMG/M
3300031833\|Ga0310917_10177930	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300031835\|Ga0318517_10436089	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031879\|Ga0306919_10170665	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300031879\|Ga0306919_10173627	Not Available	1587	Open in IMG/M
3300031879\|Ga0306919_10234626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1376	Open in IMG/M
3300031879\|Ga0306919_10814202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300031890\|Ga0306925_10141692	All Organisms → cellular organisms → Bacteria	2584	Open in IMG/M
3300031890\|Ga0306925_10237843	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300031896\|Ga0318551_10078142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1728	Open in IMG/M
3300031897\|Ga0318520_10096753	Not Available	1650	Open in IMG/M
3300031897\|Ga0318520_10681233	Not Available	642	Open in IMG/M
3300031910\|Ga0306923_10000745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26626	Open in IMG/M
3300031910\|Ga0306923_12362114	Not Available	528	Open in IMG/M
3300031912\|Ga0306921_10001317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23883	Open in IMG/M
3300031912\|Ga0306921_11413379	Not Available	764	Open in IMG/M
3300031941\|Ga0310912_10107808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2061	Open in IMG/M
3300031942\|Ga0310916_10234821	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300031942\|Ga0310916_10619237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	919	Open in IMG/M
3300031945\|Ga0310913_10476260	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300031945\|Ga0310913_11303995	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300031947\|Ga0310909_10001486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	13856	Open in IMG/M
3300031947\|Ga0310909_10999353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300031947\|Ga0310909_11299127	Not Available	585	Open in IMG/M
3300031954\|Ga0306926_10176445	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300031981\|Ga0318531_10328306	Not Available	691	Open in IMG/M
3300032001\|Ga0306922_10544393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1234	Open in IMG/M
3300032010\|Ga0318569_10183145	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300032035\|Ga0310911_10035207	All Organisms → cellular organisms → Bacteria → Proteobacteria	2527	Open in IMG/M
3300032035\|Ga0310911_10198441	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300032041\|Ga0318549_10119012	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300032041\|Ga0318549_10186357	Not Available	930	Open in IMG/M
3300032042\|Ga0318545_10113942	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300032052\|Ga0318506_10396444	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300032055\|Ga0318575_10069194	Not Available	1661	Open in IMG/M
3300032055\|Ga0318575_10333094	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300032059\|Ga0318533_10123500	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300032059\|Ga0318533_10436643	Not Available	958	Open in IMG/M
3300032067\|Ga0318524_10601510	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300032090\|Ga0318518_10082368	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300032090\|Ga0318518_10667929	Not Available	529	Open in IMG/M
3300032091\|Ga0318577_10056132	Not Available	1778	Open in IMG/M
3300032091\|Ga0318577_10444594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300032261\|Ga0306920_100546709	All Organisms → cellular organisms → Bacteria	1716	Open in IMG/M
3300032261\|Ga0306920_100967479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1241	Open in IMG/M
3300033289\|Ga0310914_11012263	Not Available	731	Open in IMG/M
3300033290\|Ga0318519_10882562	Not Available	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.20%
Host-Associated	Host-Associated	1.20%
Engineered	Engineered	0.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.01%
Aquatic	Environmental → Aquatic	1.20%
Plants	Host-Associated → Plants	1.20%
Modeled	Engineered → Modeled	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.41%
Freshwater	Environmental → Aquatic → Freshwater	1.20%
Cave	Environmental → Terrestrial → Cave	0.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.60%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.02%
Loam	Environmental → Terrestrial → Soil → Loam	3.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.20%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.60%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	67.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.20%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.60%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.60%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.60%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.60%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Bulk Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.60%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.60%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.60%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.60%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.60%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300004102	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005872	Bulk soil microbial communities from Harvard Forest, USA - 3Bulk_unsorted metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030885	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0677.00005970	2166559005	Simulated	MSGSPIITEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDTL
Ga0058888_10118212	3300004102	Forest Soil	PIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL*
Ga0058901_10187203	3300004120	Forest Soil	GSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL*
Ga0058882_18270111	3300004121	Forest Soil	AAEVIRDVMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL*
Ga0008090_101024921	3300005363	Tropical Rainforest Soil	EGIRSEMSGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDPR*
Ga0066661_100507681	3300005554	Soil	VIRDGMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDTL*
Ga0066704_110326181	3300005557	Soil	IVTEIGTAIGVVCTAAAPWEGSPNPRLSHNLPGWLLGDTL*
Ga0066670_110299922	3300005560	Soil	GMSGSPIVAEAGTAIGVVCTTTSPREGGPNARLSDNLPGWLLRDPL*
Ga0066706_101690134	3300005598	Soil	AAERVHGGMSGSPIVAEAGTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL*
Ga0066903_1026744563	3300005764	Tropical Forest Soil	SEMSGSPIVTEIGTPIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDPS*
Ga0066903_1049124121	3300005764	Tropical Forest Soil	MTHAAERVHGRMSGSPIVAEAGAAIGVVAQLTSPGEGGPNARLSDNLP
Ga0058710_10031491	3300005872	Bulk Soil	THADERVLGGMSGSPIVATSGRAIGVVCTITSPRDGGPNARLSHNLPGWLLRDTL*
Ga0075424_1017981442	3300006904	Populus Rhizosphere	GSPIVAEAGTAIGVVCATTSPRESGPNARLSHNLPGWLLRDTL*
Ga0099794_105495802	3300007265	Vadose Zone Soil	MSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLSDTL*
Ga0126374_115282142	3300009792	Tropical Forest Soil	IREGMSGSPIVTEIGTAIGVVCTAAAPWEGGPNARLSHNLPGWLLHNTL*
Ga0126373_105833462	3300010048	Tropical Forest Soil	IREGMSGSPIVTEIGTAIGVVCTAAAPGEGGPNARLSHTLPGWLLHHTP*
Ga0099796_100624163	3300010159	Vadose Zone Soil	EAGTAIGVVCAPTSPREGGPKARLSHNLPGWLLRDTL*
Ga0126376_104389862	3300010359	Tropical Forest Soil	SPIVTEIGTAIGVVCTAAAPWEGGPNARLSHNLPGWLLHDTL*
Ga0126372_113244722	3300010360	Tropical Forest Soil	VTEIGTAIGVVCTATAPGAGGPNPRLTQNLPGWLLRMPFMEARG*
Ga0126372_118380101	3300010360	Tropical Forest Soil	PIVGEAGTTIGVVCTTTSPREGDPNARLSDNLPGWLLRDTL*
Ga0126381_1015214331	3300010376	Tropical Forest Soil	DGMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLSDTL*
Ga0126381_1020443301	3300010376	Tropical Forest Soil	GSPIVSESGTAIGVVCTVTAPREGGPNARLSDNLPGWLLRKASQKG*
Ga0126381_1027559562	3300010376	Tropical Forest Soil	MLGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRMPFMEARA*
Ga0126381_1029089501	3300010376	Tropical Forest Soil	MSGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDPL*
Ga0126381_1043110441	3300010376	Tropical Forest Soil	SGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTRNLPGWLLHDPL*
Ga0126381_1048894932	3300010376	Tropical Forest Soil	IVTEIGTAIGVVCTAAAPWEGGPNPRLTHHLPGWLLRDPL*
Ga0126381_1050293841	3300010376	Tropical Forest Soil	SGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDLL*
Ga0136449_1012336704	3300010379	Peatlands Soil	VAEAGTAIGVVCATTSPREGGPNARLSDNLPGWLLRDTPLGNQS*
Ga0126383_100034881	3300010398	Tropical Forest Soil	PIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDPL*
Ga0126383_102186474	3300010398	Tropical Forest Soil	VVLLHDPPLRRALWITHAAERVHTGMSGSPIVSETGTAIGVVCSTTSPREGGPNARLSDNLPGWLLRDPF*
Ga0126383_104341752	3300010398	Tropical Forest Soil	PIVTEIGTAIGVVCTAAAPWEGGPNARLSRNLPGWLLHDTL*
Ga0126383_116044391	3300010398	Tropical Forest Soil	MSGSPIVTEIGTAIGVVCTAAAPWAGGSNPRLTHNLPGWLLRDPL*
Ga0126383_124905262	3300010398	Tropical Forest Soil	IVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDLL*
Ga0137392_115532091	3300011269	Vadose Zone Soil	GGMSGSPIVAEAGTAIGVVCTTTSPREGGPNARLSDNLPGWLLRDTL*
Ga0137389_104141491	3300012096	Vadose Zone Soil	GTAIGVVCTTTSPREGGPNARLSDNLPGWLLRDTL*
Ga0137388_102901331	3300012189	Vadose Zone Soil	ERVLGGMSGSPIVAEAGTAIGVVCTTTSPREGGPNARLSDNLPGWLLRDTL*
Ga0137382_106105331	3300012200	Vadose Zone Soil	GSPIVAEAGTAIGVVCAPTSPREGGLNARLSHNLPGWLLRDTL*
Ga0137377_102484333	3300012211	Vadose Zone Soil	VLGGMSGSPIISVAGTAIGVVCTTTSPREGGPNARLSDNLPGWLLRDTL*
Ga0150985_1014955031	3300012212	Avena Fatua Rhizosphere	EVIREGMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLSDTL*
Ga0137386_101750261	3300012351	Vadose Zone Soil	PIVSVAGTAIGVVCTTTSPREGGPNARLSDNLPGWLLRDTL*
Ga0137358_107679351	3300012582	Vadose Zone Soil	SPIISVAGTAIGVVCTTTSPREGGPNARLSDNLPGWLLRDPF*
Ga0137397_102003171	3300012685	Vadose Zone Soil	IRDGMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDTL*
Ga0137410_103788033	3300012944	Vadose Zone Soil	MVGSPIVAEAGTAIGVVCATTSPREGGLNARLSHNLPGWLLRDTL*
Ga0182036_100908321	3300016270	Soil	IGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0182036_107171431	3300016270	Soil	IVAEAGTAIGVVCTITTPRDGGPNPRLSDSLPGWLLQDAL
Ga0182036_109370701	3300016270	Soil	TEIGTPIGVVCTAAAPWEGGPNPCLTLNLPGWLLRDQS
Ga0182033_101917921	3300016319	Soil	MSGSPIVAEAGTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL
Ga0182033_105039882	3300016319	Soil	VIRDVMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0182033_117583821	3300016319	Soil	ERLHGGMSGSPIVAEAGTAIGVVCTTTSPREGGPNARLSDNLPGWLLRDTH
Ga0182035_100992431	3300016341	Soil	HAAEGIRSEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0182035_102368921	3300016341	Soil	IVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDAL
Ga0182032_101639251	3300016357	Soil	PIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0182032_102963261	3300016357	Soil	GTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0182032_105550961	3300016357	Soil	IITEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLVRDSL
Ga0182032_113637812	3300016357	Soil	VAEAGTAIGVVCTTTSPREGGPNARLSDNLPGWLLRDTL
Ga0182034_100372081	3300016371	Soil	LWITHAAEGIRSEMSGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDP
Ga0182034_113627471	3300016371	Soil	THAAEGIRSEMSGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTQNLPGWLLRMPFMEARA
Ga0182034_113925102	3300016371	Soil	GTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLSDTL
Ga0182040_102859991	3300016387	Soil	EMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0182037_100452424	3300016404	Soil	SPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDP
Ga0182037_108890901	3300016404	Soil	SPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLSDTL
Ga0182037_118353402	3300016404	Soil	IVTEIGTPIGVVCTAAAPWEGGPNPCLTLNLPGWLLRDQS
Ga0182037_120907422	3300016404	Soil	GTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTI
Ga0182039_102200701	3300016422	Soil	GIRSEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0182038_100797925	3300016445	Soil	TEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLVRDSL
Ga0182038_106277692	3300016445	Soil	AAEVIRDVMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0187814_101564052	3300017932	Freshwater Sediment	AEAGTAIVVVCTTTSPREGGPNARLSDNLPGWLLRDTL
Ga0187801_101056502	3300017933	Freshwater Sediment	GSPIVTEIGTAIGAVCTAAAPWEGGPNPRLTHNLPGWLLLDAL
Ga0187779_104469041	3300017959	Tropical Peatland	PIVAEAGTAIGVVCTVTSPREGGPNARLSDHLPGWLLRDTP
Ga0187783_105683862	3300017970	Tropical Peatland	GTAIGVVCTAAAPWEGGPNPRLTDNLPGWLLRDAV
Ga0187782_106162261	3300017975	Tropical Peatland	IGTAIGVVCAAAAPGEVGPNPRLTDSLPGWLLRDAP
Ga0210407_103359092	3300020579	Soil	TEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLSDTL
Ga0210403_103063571	3300020580	Soil	GSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0210400_110084541	3300021170	Soil	DVMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0210386_112717411	3300021406	Soil	VTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0210394_110134961	3300021420	Soil	IVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0187846_100122874	3300021476	Biofilm	IRDVMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0126371_117266282	3300021560	Tropical Forest Soil	IRSEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLMRDTV
Ga0242651_10001624	3300022511	Soil	GSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDTL
Ga0242664_11050741	3300022527	Soil	TEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0242664_11307361	3300022527	Soil	EIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLSDTL
Ga0242669_10829741	3300022528	Soil	SPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0242668_10929701	3300022529	Soil	PIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0242660_11328572	3300022531	Soil	MSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLSDTL
Ga0242677_10220121	3300022713	Soil	EIGTAIGVVCTAAAPWEGGPNARLSHNLPGWLLGDAL
Ga0242673_10267261	3300022716	Soil	PIVTEIGTAIGVVCTAAAPWEGSPNPRLSHNLPGWLLGDAL
Ga0242672_10109051	3300022720	Soil	ITHAAEVIRDVMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0242665_102812851	3300022724	Soil	IGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0209155_12502221	3300026316	Soil	SPIVAEAGTAIGVVCTTTSPREGGPNARLSDNLPGWLLRDPL
Ga0209648_106882881	3300026551	Grasslands Soil	AEVIRDGMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDTL
Ga0209180_103087072	3300027846	Vadose Zone Soil	ISVAGTAIGVVCTTTSPREGGPNARLSDNLPGWLLRDTL
Ga0209180_103629411	3300027846	Vadose Zone Soil	SPIVAEAGTAIGVVCTTTSPRDGGPNARLSDNLPGWLLRDTL
Ga0265743_1002733	3300030885	Soil	HAAEVIRDVMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0075394_119372642	3300030969	Soil	LGGMSGSPIVAEAGTAIGVVCATTSPREGGPNARLSHNLPGWLLRDTL
Ga0170824_1125369874	3300031231	Forest Soil	SGSPIVAASGTAIGVVCTTTSPREGGPNARLSDNLLGCLLRDTL
Ga0170824_1217994301	3300031231	Forest Soil	RVLGGMSGSPIVAEAGTAIGVVCTITSPREGGPNARLSDNLPGWLLRDTL
Ga0170818_1090056481	3300031474	Forest Soil	RDVMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLSDTL
Ga0318528_105665411	3300031561	Soil	RDVMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0318573_104068301	3300031564	Soil	AEVIRSEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDAL
Ga0318515_103210121	3300031572	Soil	SGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDAL
Ga0310915_105642882	3300031573	Soil	GSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRTPFMEATA
Ga0310915_106139721	3300031573	Soil	THAAEGIRNEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTV
Ga0310915_112946962	3300031573	Soil	THAAEGIRNEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0318561_100463933	3300031679	Soil	SEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTYNLPGWLLHDTL
Ga0318560_100539921	3300031682	Soil	AAEGIRNEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0306917_101897871	3300031719	Soil	MSGSPMITEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLVRDSL
Ga0306917_102393603	3300031719	Soil	SGSAIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRTPFMEATA
Ga0306917_108196533	3300031719	Soil	AEGIRNEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0318493_103153972	3300031723	Soil	RSEMSGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRTPFMEATA
Ga0318501_102924792	3300031736	Soil	LWITHAAEGIVNEMSGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDLL
Ga0306918_102436162	3300031744	Soil	RSEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTDNLPGWLLRDTL
Ga0306918_104451151	3300031744	Soil	WITHAAEVIRDVMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0306918_108626882	3300031744	Soil	AAEGIRSEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHKLPGWLLRDPL
Ga0306918_115736021	3300031744	Soil	IVTEIGTAIGVVCTAAAPWEGGPNPRLTYNLPGWLLHDTL
Ga0318502_109774432	3300031747	Soil	LWITHAAEVIRSEMAGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHHLPGWLLRDAL
Ga0318537_102359482	3300031763	Soil	IGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRTPFMEATA
Ga0318529_106152511	3300031792	Soil	GSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0318548_100961481	3300031793	Soil	RSEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDAL
Ga0310917_100578901	3300031833	Soil	TEIGTAIGVVCTAAAPWEGGPNPRLTYNLPGWLLHDTL
Ga0310917_101779301	3300031833	Soil	IVAEAGTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL
Ga0318517_104360891	3300031835	Soil	AEGIRSEMSGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRTPFMEATA
Ga0306919_101706651	3300031879	Soil	SGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRTPFMEATA
Ga0306919_101736271	3300031879	Soil	EAGTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL
Ga0306919_102346261	3300031879	Soil	RNEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0306919_108142021	3300031879	Soil	GSPIVTEIGTAIGVVCTAAAPWEGGPNARLSHNLPGWLLHHTL
Ga0306925_101416925	3300031890	Soil	RSEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0306925_102378431	3300031890	Soil	SPIVAEAGTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL
Ga0318551_100781421	3300031896	Soil	GSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDP
Ga0318520_100967535	3300031897	Soil	SVPIVTEIGTEIGVVCTAAAPWEGGPNPRLTHKLPGWLLRDPL
Ga0318520_106812332	3300031897	Soil	MSGSPILTEIGTEIGVVCTAAAPWEGGPNPRLTHNL
Ga0306923_1000074525	3300031910	Soil	GMSGSPIVAEAGTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL
Ga0306923_123621141	3300031910	Soil	HAAEGIVNEMSGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDLL
Ga0306921_1000131721	3300031912	Soil	GSPIVAEAGTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL
Ga0306921_114133792	3300031912	Soil	GSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDPLI
Ga0310912_101078083	3300031941	Soil	HAAEGIRSEMSGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTQNLPGWLLRDP
Ga0310916_102348211	3300031942	Soil	AIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRTPFMEATA
Ga0310916_106192371	3300031942	Soil	TEIGTAIGVVCTAAAPWEGGPNARLSHNLPGWLLHDTL
Ga0310913_104762602	3300031945	Soil	PIVAEAGTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL
Ga0310913_113039952	3300031945	Soil	GIRSEMSGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRTPFMEATA
Ga0310909_100014861	3300031947	Soil	VAEAGTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL
Ga0310909_109993533	3300031947	Soil	IRNEMSGSPIVSEIGTTIGVVCTAAALWEGGTNPRLTHNLTGWLLRDTL
Ga0310909_112991271	3300031947	Soil	EGIRSEMSGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLHDPLI
Ga0306926_101764451	3300031954	Soil	VMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLSHNLPGWLLGDAL
Ga0318531_103283062	3300031981	Soil	HAAEGIRNEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTV
Ga0306922_105443931	3300032001	Soil	GSPIITEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLVRDSL
Ga0318569_101831452	3300032010	Soil	HGGMSGSPIVAKAGTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL
Ga0310911_100352076	3300032035	Soil	IGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDAL
Ga0310911_101984412	3300032035	Soil	EIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0318549_101190121	3300032041	Soil	MSGSPIVAKAGTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL
Ga0318549_101863571	3300032041	Soil	GSPIVSESGTAIGVVCTVTAPREGGPNARLSDNLPGWLLREVNQKG
Ga0318545_101139421	3300032042	Soil	AEGIRSEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTYNLPGWLLHDTL
Ga0318506_103964442	3300032052	Soil	ITHAAEGIRSEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTYNLPGWLLHDTL
Ga0318575_100691942	3300032055	Soil	ITHAAERVHGGMSGSPIVAEAWTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL
Ga0318575_103330942	3300032055	Soil	IRSEMSGSPIVTEIGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDP
Ga0318533_101235001	3300032059	Soil	HPAEGICSEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0318533_104366431	3300032059	Soil	GSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTV
Ga0318504_104724652	3300032063	Soil	PLWITHAAEGIRNEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0318524_106015102	3300032067	Soil	GGMSGSPIVGEAGTTIGVVCTTTSPREGDPNARLSDNLPGWLLRDTL
Ga0318518_100823681	3300032090	Soil	GTAIGVVCTTTSPREGGPNARLSHNLPGWLLRDTL
Ga0318518_106679291	3300032090	Soil	VTEIGTAIGVVCTAAAPWEGGPNPRLTDNLPGWLLRDTL
Ga0318577_100561325	3300032091	Soil	PIVTEIGTAIGVVCTAAAPWEGGPNPRLTHKLPGWLLRDPL
Ga0318577_104445942	3300032091	Soil	VTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTL
Ga0306920_1005467091	3300032261	Soil	SGSPIVTESGTAIGVVCTAAAPWEGGPNPHLTHNLPGWLLRDPL
Ga0306920_1009674791	3300032261	Soil	GRDGDRVVCTTTSPREGGPNARLSDNLPGWLLRDTH
Ga0306920_1013881361	3300032261	Soil	THAAERVLGGMSGSPIVAEAGTAIGVVCTTTSPREGGPNARLSDNLPGWLLRDTL
Ga0310914_110122631	3300033289	Soil	IGTAIGVVCTAAAPWAGGPNPRLTHNLPGWLLRDP
Ga0318519_108825622	3300033290	Soil	RNEMSGSPIVTEIGTAIGVVCTAAAPWEGGPNPRLTHNLPGWLLRDTV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037600

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences