Metagenome / Metatranscriptome Family F037852

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F037852
Family Type	Metagenome / Metatranscriptome
Number of Sequences	167
Average Sequence Length	49 residues
Representative Sequence	VRNLFDRRVYTFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSTDF
Number of Associated Samples	114
Number of Associated Scaffolds	167

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	87.43 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.898 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (31.138 % of family members)
Environment Ontology (ENVO)	Unclassified (70.659 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.048 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 167 Family Scaffolds
PF01012	ETF	73.65
PF00069	Pkinase	6.59
PF14371	DUF4412	4.79
PF00593	TonB_dep_Rec	3.59
PF13450	NAD_binding_8	1.80
PF03454	MoeA_C	1.20
PF12804	NTP_transf_3	0.60
PF05187	ETF_QO	0.60
PF12688	TPR_5	0.60
PF13432	TPR_16	0.60
PF13520	AA_permease_2	0.60
PF13181	TPR_8	0.60
PF01914	MarC	0.60

COG ID	Name	Functional Category	% Frequency in 167 Family Scaffolds
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	73.65
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	73.65
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	26.35
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	1.20
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.60
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.60
COG2440	Ferredoxin-like protein FixX	Energy production and conversion [C]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.90 %
Unclassified	root	N/A	49.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.90 %
Unclassified	root	N/A	49.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.90 %
Unclassified	root	N/A	49.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.10 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	28.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.10 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	23.35 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.60 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.10 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	8.98 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	5.39 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.60 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.10 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	8.98 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	5.39 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.60 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.10 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	8.98 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5.39 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.60 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.10 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	8.98 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.80 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.60 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.60 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.10 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	8.98 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.80 %
Gemmatimonas phototrophica	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas phototrophica	0.60 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.60 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002561\|JGI25384J37096_10151225	Not Available	741	Open in IMG/M
3300002561\|JGI25384J37096_10234772	Not Available	536	Open in IMG/M
3300002562\|JGI25382J37095_10155383	Not Available	739	Open in IMG/M
3300002908\|JGI25382J43887_10180867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1036	Open in IMG/M
3300002908\|JGI25382J43887_10240548	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300002908\|JGI25382J43887_10346492	Not Available	631	Open in IMG/M
3300002908\|JGI25382J43887_10351242	All Organisms → cellular organisms → Bacteria → FCB group	626	Open in IMG/M
3300002909\|JGI25388J43891_1038605	Not Available	749	Open in IMG/M
3300002911\|JGI25390J43892_10072946	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	787	Open in IMG/M
3300002911\|JGI25390J43892_10092927	Not Available	676	Open in IMG/M
3300002911\|JGI25390J43892_10106642	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300002916\|JGI25389J43894_1060418	All Organisms → cellular organisms → Bacteria → FCB group	643	Open in IMG/M
3300002916\|JGI25389J43894_1107275	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300005166\|Ga0066674_10007726	All Organisms → cellular organisms → Bacteria	4331	Open in IMG/M
3300005166\|Ga0066674_10492169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300005167\|Ga0066672_10157344	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1428	Open in IMG/M
3300005167\|Ga0066672_10230338	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300005167\|Ga0066672_10443993	Not Available	847	Open in IMG/M
3300005172\|Ga0066683_10206255	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300005174\|Ga0066680_10189008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1299	Open in IMG/M
3300005174\|Ga0066680_10768706	Not Available	583	Open in IMG/M
3300005176\|Ga0066679_10433678	Not Available	860	Open in IMG/M
3300005177\|Ga0066690_10020552	All Organisms → cellular organisms → Bacteria	3669	Open in IMG/M
3300005178\|Ga0066688_10027476	All Organisms → cellular organisms → Bacteria	3104	Open in IMG/M
3300005178\|Ga0066688_10373584	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005178\|Ga0066688_10575494	Not Available	724	Open in IMG/M
3300005178\|Ga0066688_10589309	Not Available	714	Open in IMG/M
3300005179\|Ga0066684_11007861	Not Available	537	Open in IMG/M
3300005186\|Ga0066676_10368437	Not Available	964	Open in IMG/M
3300005406\|Ga0070703_10039499	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1463	Open in IMG/M
3300005440\|Ga0070705_101109613	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005529\|Ga0070741_10853724	Not Available	791	Open in IMG/M
3300005540\|Ga0066697_10076262	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1931	Open in IMG/M
3300005540\|Ga0066697_10642091	Not Available	585	Open in IMG/M
3300005545\|Ga0070695_100729576	Not Available	789	Open in IMG/M
3300005555\|Ga0066692_10014402	All Organisms → cellular organisms → Bacteria	3854	Open in IMG/M
3300005555\|Ga0066692_10655206	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	654	Open in IMG/M
3300005559\|Ga0066700_10588755	Not Available	776	Open in IMG/M
3300005568\|Ga0066703_10001519	All Organisms → cellular organisms → Bacteria	8874	Open in IMG/M
3300005569\|Ga0066705_10101669	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1710	Open in IMG/M
3300005576\|Ga0066708_10616725	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300006031\|Ga0066651_10320178	Not Available	832	Open in IMG/M
3300006034\|Ga0066656_10002689	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8084	Open in IMG/M
3300006034\|Ga0066656_10658723	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300006175\|Ga0070712_100847526	Not Available	786	Open in IMG/M
3300006791\|Ga0066653_10071746	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1502	Open in IMG/M
3300006791\|Ga0066653_10221487	Not Available	962	Open in IMG/M
3300006794\|Ga0066658_10064773	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1617	Open in IMG/M
3300006794\|Ga0066658_10685881	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300006794\|Ga0066658_10806805	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	530	Open in IMG/M
3300006796\|Ga0066665_10417718	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300006796\|Ga0066665_11533616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
3300006797\|Ga0066659_11213677	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300006800\|Ga0066660_11621690	All Organisms → cellular organisms → Bacteria → FCB group	513	Open in IMG/M
3300006852\|Ga0075433_10631405	Not Available	939	Open in IMG/M
3300006854\|Ga0075425_101872115	Not Available	673	Open in IMG/M
3300006903\|Ga0075426_10329946	Not Available	1119	Open in IMG/M
3300006903\|Ga0075426_10963128	Not Available	644	Open in IMG/M
3300007258\|Ga0099793_10264716	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	832	Open in IMG/M
3300009012\|Ga0066710_102028482	Not Available	851	Open in IMG/M
3300009012\|Ga0066710_104123475	Not Available	543	Open in IMG/M
3300009012\|Ga0066710_104620256	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	514	Open in IMG/M
3300009088\|Ga0099830_10298783	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300009089\|Ga0099828_11728894	Not Available	550	Open in IMG/M
3300009090\|Ga0099827_10216422	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1599	Open in IMG/M
3300009090\|Ga0099827_11095090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	692	Open in IMG/M
3300009137\|Ga0066709_100252193	All Organisms → cellular organisms → Bacteria	2363	Open in IMG/M
3300009137\|Ga0066709_102810385	Not Available	645	Open in IMG/M
3300009137\|Ga0066709_103882044	Not Available	543	Open in IMG/M
3300010301\|Ga0134070_10032784	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1722	Open in IMG/M
3300010301\|Ga0134070_10049267	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1419	Open in IMG/M
3300010301\|Ga0134070_10316247	All Organisms → cellular organisms → Bacteria → FCB group	598	Open in IMG/M
3300010303\|Ga0134082_10250217	Not Available	734	Open in IMG/M
3300010303\|Ga0134082_10263851	Not Available	716	Open in IMG/M
3300010304\|Ga0134088_10057086	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1799	Open in IMG/M
3300010304\|Ga0134088_10248263	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	856	Open in IMG/M
3300010304\|Ga0134088_10370279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	697	Open in IMG/M
3300010304\|Ga0134088_10444214	Not Available	635	Open in IMG/M
3300010304\|Ga0134088_10665092	Not Available	521	Open in IMG/M
3300010304\|Ga0134088_10723830	Not Available	500	Open in IMG/M
3300010320\|Ga0134109_10139582	Not Available	867	Open in IMG/M
3300010321\|Ga0134067_10025964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1793	Open in IMG/M
3300010322\|Ga0134084_10064183	Not Available	1109	Open in IMG/M
3300010323\|Ga0134086_10498171	Not Available	504	Open in IMG/M
3300010329\|Ga0134111_10068844	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300010329\|Ga0134111_10413139	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300010333\|Ga0134080_10210302	Not Available	846	Open in IMG/M
3300010335\|Ga0134063_10748846	Not Available	509	Open in IMG/M
3300010399\|Ga0134127_11234561	Not Available	815	Open in IMG/M
3300010403\|Ga0134123_12726074	Not Available	562	Open in IMG/M
3300012189\|Ga0137388_10326250	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1411	Open in IMG/M
3300012198\|Ga0137364_10554570	Not Available	865	Open in IMG/M
3300012198\|Ga0137364_10800469	Not Available	712	Open in IMG/M
3300012198\|Ga0137364_11147831	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012200\|Ga0137382_10977431	Not Available	608	Open in IMG/M
3300012202\|Ga0137363_10056361	All Organisms → cellular organisms → Bacteria	2838	Open in IMG/M
3300012203\|Ga0137399_10033876	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3553	Open in IMG/M
3300012204\|Ga0137374_10005046	All Organisms → cellular organisms → Bacteria	15676	Open in IMG/M
3300012207\|Ga0137381_10853157	Not Available	788	Open in IMG/M
3300012207\|Ga0137381_11131655	Not Available	673	Open in IMG/M
3300012207\|Ga0137381_11627691	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012285\|Ga0137370_10079290	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1817	Open in IMG/M
3300012351\|Ga0137386_10911543	Not Available	629	Open in IMG/M
3300012356\|Ga0137371_10850586	Not Available	694	Open in IMG/M
3300012357\|Ga0137384_10050261	All Organisms → cellular organisms → Bacteria	3449	Open in IMG/M
3300012358\|Ga0137368_10811828	Not Available	578	Open in IMG/M
3300012358\|Ga0137368_10873576	Not Available	550	Open in IMG/M
3300012363\|Ga0137390_11740000	Not Available	557	Open in IMG/M
3300012390\|Ga0134054_1288942	Not Available	632	Open in IMG/M
3300012582\|Ga0137358_11009011	All Organisms → cellular organisms → Bacteria → FCB group	538	Open in IMG/M
3300012923\|Ga0137359_10010241	All Organisms → cellular organisms → Bacteria	7798	Open in IMG/M
3300012927\|Ga0137416_10453317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1097	Open in IMG/M
3300012972\|Ga0134077_10242700	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300012976\|Ga0134076_10095951	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1171	Open in IMG/M
3300012976\|Ga0134076_10132894	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1008	Open in IMG/M
3300015356\|Ga0134073_10116843	Not Available	808	Open in IMG/M
3300015357\|Ga0134072_10000460	All Organisms → cellular organisms → Bacteria	6602	Open in IMG/M
3300015357\|Ga0134072_10266531	All Organisms → cellular organisms → Bacteria → FCB group	624	Open in IMG/M
3300015358\|Ga0134089_10064767	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas phototrophica	1355	Open in IMG/M
3300015359\|Ga0134085_10178393	Not Available	909	Open in IMG/M
3300017654\|Ga0134069_1299840	Not Available	569	Open in IMG/M
3300017656\|Ga0134112_10134221	Not Available	945	Open in IMG/M
3300017656\|Ga0134112_10201404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	778	Open in IMG/M
3300017659\|Ga0134083_10001312	All Organisms → cellular organisms → Bacteria	7137	Open in IMG/M
3300017659\|Ga0134083_10352070	Not Available	634	Open in IMG/M
3300017966\|Ga0187776_11626211	Not Available	500	Open in IMG/M
3300018431\|Ga0066655_10424462	Not Available	877	Open in IMG/M
3300018433\|Ga0066667_10068770	Not Available	2229	Open in IMG/M
3300018433\|Ga0066667_11866291	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300019255\|Ga0184643_1216075	Not Available	1020	Open in IMG/M
3300025885\|Ga0207653_10078437	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300025939\|Ga0207665_11610518	All Organisms → cellular organisms → Bacteria → FCB group	515	Open in IMG/M
3300026295\|Ga0209234_1134869	Not Available	892	Open in IMG/M
3300026295\|Ga0209234_1135308	Not Available	890	Open in IMG/M
3300026295\|Ga0209234_1140647	Not Available	866	Open in IMG/M
3300026295\|Ga0209234_1210148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	653	Open in IMG/M
3300026296\|Ga0209235_1185976	Not Available	758	Open in IMG/M
3300026297\|Ga0209237_1083046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1460	Open in IMG/M
3300026297\|Ga0209237_1127146	Not Available	1055	Open in IMG/M
3300026298\|Ga0209236_1164349	Not Available	914	Open in IMG/M
3300026298\|Ga0209236_1276281	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300026301\|Ga0209238_1000546	All Organisms → cellular organisms → Bacteria	13616	Open in IMG/M
3300026301\|Ga0209238_1253339	Not Available	524	Open in IMG/M
3300026317\|Ga0209154_1169223	Not Available	888	Open in IMG/M
3300026325\|Ga0209152_10099624	Not Available	1093	Open in IMG/M
3300026327\|Ga0209266_1208764	Not Available	696	Open in IMG/M
3300026329\|Ga0209375_1044628	All Organisms → cellular organisms → Bacteria	2259	Open in IMG/M
3300026330\|Ga0209473_1285249	Not Available	554	Open in IMG/M
3300026333\|Ga0209158_1078421	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300026343\|Ga0209159_1032954	All Organisms → cellular organisms → Bacteria	2742	Open in IMG/M
3300026524\|Ga0209690_1043186	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2065	Open in IMG/M
3300026524\|Ga0209690_1264675	Not Available	541	Open in IMG/M
3300026532\|Ga0209160_1245715	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	611	Open in IMG/M
3300026536\|Ga0209058_1303732	Not Available	549	Open in IMG/M
3300026537\|Ga0209157_1141603	Not Available	1091	Open in IMG/M
3300026538\|Ga0209056_10310341	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1077	Open in IMG/M
3300026542\|Ga0209805_1186619	Not Available	910	Open in IMG/M
3300026548\|Ga0209161_10018552	All Organisms → cellular organisms → Bacteria	5052	Open in IMG/M
3300027388\|Ga0208995_1046969	Not Available	760	Open in IMG/M
3300027748\|Ga0209689_1009652	Not Available	6475	Open in IMG/M
3300027787\|Ga0209074_10414343	All Organisms → cellular organisms → Bacteria → FCB group	567	Open in IMG/M
3300028792\|Ga0307504_10146622	Not Available	797	Open in IMG/M
3300028828\|Ga0307312_10786578	Not Available	630	Open in IMG/M
3300028878\|Ga0307278_10209505	Not Available	868	Open in IMG/M
3300031720\|Ga0307469_11820871	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	588	Open in IMG/M
3300031962\|Ga0307479_10359973	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300032180\|Ga0307471_103439083	Not Available	560	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.60%
Host-Associated	Host-Associated	2.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.01%
Plants	Host-Associated → Plants	2.40%
Aquatic	Environmental → Aquatic	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.40%
Freshwater	Environmental → Aquatic → Freshwater	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.22%
Loam	Environmental → Terrestrial → Soil → Loam	4.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.40%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.60%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	50.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	31.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	19.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	19.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.20%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.60%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25384J37096_101512251	3300002561	Grasslands Soil	VRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPXPPRHVQISLSTDF*
JGI25384J37096_102347722	3300002561	Grasslands Soil	RRYASFGTFAANPLAPGSPVQRFLTPGLPRHVQVSVSAEF*
JGI25382J37095_101553832	3300002562	Grasslands Soil	NLFDRRVYTFGTFAENPTAPGSPVQRWLTPXPPRHVQISLSTDF*
JGI25382J43887_101808672	3300002908	Grasslands Soil	AAATVTWRSLELRCMVRNVFDRRYENFGTYAENPTRPGNPVERWLTPGLPRHLTVSLSSDF*
JGI25382J43887_102405482	3300002908	Grasslands Soil	LELRCMVRNVFDRRYENFGTYAENPTRPGNPVERWLTPGLPRHLQVSLSSDF*
JGI25382J43887_103464922	3300002908	Grasslands Soil	NLFDRRVYTFGTFAENPTAPGSPVQRWLTPGPPRHMQVSLSADF*
JGI25382J43887_103512422	3300002908	Grasslands Soil	DLSLTLTWRDLELRGAVGNLFDRRYVSFGTXAENPTAPGTPVQRWLTPGPPRHVQVSLSTDF*
JGI25388J43891_10386051	3300002909	Grasslands Soil	AVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQISLSADF*
JGI25390J43892_100729462	3300002911	Grasslands Soil	VADAAATVTWRSLELRCMVRNVLDRRYENFGTYAENSTRPGNPVERWLTPGLPRHVQVSLSTDF*
JGI25390J43892_100929272	3300002911	Grasslands Soil	ELELRCTVGNLFARRYYSFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSTDF*
JGI25390J43892_101066422	3300002911	Grasslands Soil	EYAVGDLSLTLAWRELELRCSVGNVFARRYYNFGTFAENPTAPGTPVQRWLTPGPPRHLQMSLSTDF*
JGI25389J43894_10604181	3300002916	Grasslands Soil	DEENATSRLSAYAVGDLSLTLAWRELELRCTVGNVFARRYYNFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSTDF*
JGI25389J43894_11072751	3300002916	Grasslands Soil	LRCMVRNLLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHLTVSLSTDF*
Ga0066674_100077265	3300005166	Soil	RCMVRNLLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHLTVSLSTDF*
Ga0066674_104921691	3300005166	Soil	RCMVRNLLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHVTVSLSSDF*
Ga0066672_101573441	3300005167	Soil	DRRYENFGTYAENPTRPGNPVERWLTPGLPRNLQVSLSTDF*
Ga0066672_102303381	3300005167	Soil	LFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQISLSADF*
Ga0066672_104439932	3300005167	Soil	LFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQISLSTDF*
Ga0066683_102062551	3300005172	Soil	RFEVRCSVRNVLDRRYPSFGTFAENPLAPGTPVQRFLTPGFPRQLQVSVSAEF*
Ga0066680_101890081	3300005174	Soil	TVTWRSLELRCMVRNVLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHVQVSLSTDF*
Ga0066680_107687062	3300005174	Soil	AVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQVSLSADF*
Ga0066679_104336781	3300005176	Soil	RRYVTFGTFAENPTVPGNPVERFVTPGMLRHLLVSVSADF*
Ga0066690_100205525	3300005177	Soil	ATRRLADYGVADAAATVTWRSLELRCMVRNVLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHLTVSLSTDF*
Ga0066688_100274764	3300005178	Soil	LDRRYVSFGTYAPNPTLPGARIQRWVTPGLPRHLQLSVSTDF*
Ga0066688_103735841	3300005178	Soil	WRDFELRGAVRNLFDRRVFTFGTFAENPTAPGTPVQRWLTPGLPRHVQVSLSADF*
Ga0066688_105754941	3300005178	Soil	RELELRAVVRNVCDRRYVRCGTFAQNPTESGAPVQRWVTPGLPRHLQVSLSADF*
Ga0066688_105893092	3300005178	Soil	FDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQVSLSADF*
Ga0066684_110078612	3300005179	Soil	DLELRAAVRNLFDRSVFTFGTFAENPTVPGNPVERWLTPGLPRHIQLSLSTDF*
Ga0066676_103684372	3300005186	Soil	WRDFELRGAVRNLLDRRDFSFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSADF*
Ga0070703_100394991	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	RRVYTFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSTDF*
Ga0070705_1011096132	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LNWRDFELRGVVRNLFDRRVYTFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSTDF*
Ga0070741_108537241	3300005529	Surface Soil	TLMATWTGYEVRCAVRNLLGRRYANFGTYAENPTVPGDPVQRWLTPGLPRTFEVSFSREF
Ga0066697_100762623	3300005540	Soil	VEWKRFELRCMVRNLFDRRYASFGTFAENPLAAGTPVQRFLTPGLPRHLQLSVSTEF*
Ga0066697_106420911	3300005540	Soil	ELRAAVRNLFDRSVFTFGTFAENPTVPGNPVERWLTPGLPRHIQLSLSTDF*
Ga0070695_1007295762	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VRNLFDRRVYTFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSTDF*
Ga0066692_100144021	3300005555	Soil	ATVTWRSLELRCMVRNVFDRRYENFGTYAENPTRPGNPVERWLTPGLPRNLQVSLSTDF*
Ga0066692_106552061	3300005555	Soil	WRSLELRCMVRNVFDRRYENFGTYAENPTRPGNPVERWLTPGLPRHLQVSLSSDF*
Ga0066700_105887551	3300005559	Soil	LFDRRYVSFGTFAENPTVTGTPIQRWLTPGPPRHVQVSLSTDF*
Ga0066703_1000151911	3300005568	Soil	FGTYAPNPTLPGAPIQRWVTPGLPRHLQLSVSTDF*
Ga0066705_101016693	3300005569	Soil	TFGTFAENPTVPGNPVERFVTPGMLRHLLVSVSAEF*
Ga0066708_106167252	3300005576	Soil	TRRLPDYAAADASLTLEWQRFEVRCSVRNVLDRRYPSFGTFAENPLAPGTPVQRFLTPGFPRQLQVSVSAEF*
Ga0066651_103201781	3300006031	Soil	DHRYVSFGTYAENPTLPGNPVERWVTPGLPRHVQVSVSTDF*
Ga0066656_100026891	3300006034	Soil	DRRYVSFGTYAPNPTLPGAPIQRWVTPGLPRHLQLSVSTDF*
Ga0066656_106587231	3300006034	Soil	GAVRNLFDRRVYTFGTFAENPTVPGSPVQRWLTPGPPRHVQISLSTDF*
Ga0070712_1008475262	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VTFGTFAENPTVTGAPVQRFLTPGQPRHLLVSISADF*
Ga0066653_100717463	3300006791	Soil	RNLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQISLSADF*
Ga0066653_102214871	3300006791	Soil	YTFGTFAENPTAPGSPVQRWLTPAPPRHVQISLSTDF*
Ga0066658_100647733	3300006794	Soil	GAVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQVSLSADF*
Ga0066658_106858811	3300006794	Soil	LRGAVRNLFDRRYVSFGTFAENPTVTGTPIQRWLTPGPPRHVQVSLSTDF*
Ga0066658_108068052	3300006794	Soil	VFDRRYENFGTYAENPTRPGNPVERWLTPGLPRNLQVSLSTDF*
Ga0066665_104177181	3300006796	Soil	NLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQISLSADF*
Ga0066665_115336161	3300006796	Soil	AVADASLTLGWRELELRAMVRNVLDHRYFNFGTFAENPTDPGTPVQRWLTPGVPRSVQLSLSTDF*
Ga0066659_112136772	3300006797	Soil	DFELRGAVRNLFDRRVFTFGTFAENPTAPGTPVQRWLTPGLPRHVQVSLSADF*
Ga0066660_116216902	3300006800	Soil	FGTFAENPTAPGTPVQRWLTPGPPRHLQMSLSTDF*
Ga0075433_106314052	3300006852	Populus Rhizosphere	DRRVYTFGTFAENPTVPGSPVQRWLTPAPPRHVQVSLSTDF*
Ga0075425_1018721151	3300006854	Populus Rhizosphere	IADLSLTLAWRELELRCTVGNVFGRRYDSFGTFAEDPTAPGTPVERWLTPGPPRHVQVSLTTEF*
Ga0075426_103299463	3300006903	Populus Rhizosphere	NVFGRRYDSFGTFAEDPTASGTPVERWLTPGPPRHVQVSLTTDF*
Ga0075426_109631282	3300006903	Populus Rhizosphere	QNLFDRRVYTFGTFAENPTAPGSPVQRWLTPGPPRHVQISLSTDF*
Ga0099793_102647161	3300007258	Vadose Zone Soil	RSVFTFGTFAENATVPGSPVQRWLTPGLPRHVQVSVSTDF*
Ga0066710_1020284821	3300009012	Grasslands Soil	AMVRNVLDHRYFNFGTFAENPTEPGTPVQRWLTPGVPRSVQVSLSTDF
Ga0066710_1041234752	3300009012	Grasslands Soil	GAVRNLFDRRYVSFGTFAENPTVTGTPIQRWLTPGPPRHVQVSLSTDF
Ga0066710_1046202562	3300009012	Grasslands Soil	SLELRCMVRNVLDWRYENFGTYAENPTRPGNPVERWLTPGLPRNLQVSLSSDF
Ga0099830_102987831	3300009088	Vadose Zone Soil	DLSLTLAWHAWELRWALGNVLDRRYVSFGTFAQDPSVAGRPVQRWLAPGPPRHLQVSLSSDF*
Ga0099828_117288942	3300009089	Vadose Zone Soil	AVRNLFDRRVYTFGTFAENPTAPGTPVQRWLTPGPPRHVQISLSTDF*
Ga0099827_102164223	3300009090	Vadose Zone Soil	LDRRYVSFGTYAPNPTLPGAPIQRWVTPGLPRHLQLSVSTDF*
Ga0099827_110950902	3300009090	Vadose Zone Soil	AMVRNVLDHRYFNFGTFAENPTEPGTPVQRWLTPGVPRSVQVSLSTEF*
Ga0066709_1002521934	3300009137	Grasslands Soil	YVTFGTFAENPTVPGNPVQRFVTPGMPRHLLVSVSAEF*
Ga0066709_1028103851	3300009137	Grasslands Soil	DRRVYTFGTFAENPTAPGSPVQRWLTPGPPRHMQVSLSADF*
Ga0066709_1038820442	3300009137	Grasslands Soil	GAVRNLFDRRYVSFGTFAENPTVTGTPIQRWLTPGPPRHVQVSLSTDF*
Ga0134070_100327841	3300010301	Grasslands Soil	TLTWRDFELRGAVRNLLDRRDFSFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSADF*
Ga0134070_100492671	3300010301	Grasslands Soil	MVRNLLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHLTVSLSTDF*
Ga0134070_103162471	3300010301	Grasslands Soil	GAVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQISLSTDF*
Ga0134082_102502171	3300010303	Grasslands Soil	RRYVSFGTYAPNPTLPGAPIQRWVTPGLPRHLQLSVSTDF*
Ga0134082_102638512	3300010303	Grasslands Soil	TWHDFELRAAVRNLFDRSVFTFGTFAENPTVPGNPVERWLTPGLPRHIQLSLSTDF*
Ga0134088_100570863	3300010304	Grasslands Soil	VRNVFDRRYASFGAFAENPLAPGAPVQRFLTPGLPRHVQVSVSTEF*
Ga0134088_102482632	3300010304	Grasslands Soil	LRCMVRNLLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHVTVSLSSDF*
Ga0134088_103702791	3300010304	Grasslands Soil	LRCMVRNLLDRRYENFGTYAENPTRPGNPVERWLTPGLPRNLQVSLSTDF*
Ga0134088_104442142	3300010304	Grasslands Soil	AVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHLQVSLSADF*
Ga0134088_106650922	3300010304	Grasslands Soil	VRNVLDHRYFNFGTFAENPTEPGTPVQRWLTPGVPRSVQLSLSTDF*
Ga0134088_107238302	3300010304	Grasslands Soil	FDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQVSLSTDF*
Ga0134109_101395822	3300010320	Grasslands Soil	YTFGTFAENPTAPGSPVQRWLTPGPPRHVQISLSTDF*
Ga0134067_100259641	3300010321	Grasslands Soil	DRRYPSFGTFAENPLAPGTPVQGFLTPGFPRQLQVSVSAEF*
Ga0134084_100641831	3300010322	Grasslands Soil	VADLSLTLAWRELELRCTVGNLFARRYFSFGAFAENPTAPGTPVERWLTPGPPRRLQVSVSTDF*
Ga0134086_104981712	3300010323	Grasslands Soil	GTFAENPLAPGTPVQRFLTPGLPRQLQVSLSTQF*
Ga0134111_100688443	3300010329	Grasslands Soil	LTLTWRDLELRGAVGNLFDRRYVSFGTFAENPTVTGTPIQRWLTPGPPRHVQVSLSTDF*
Ga0134111_104131391	3300010329	Grasslands Soil	MVRNLLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHVTVSLSSDF*
Ga0134080_102103022	3300010333	Grasslands Soil	GTFAQNPTESGTPVQRWVTPGLQRHLQVSLSADF*
Ga0134063_107488462	3300010335	Grasslands Soil	RNLFDRRYVSFGTFAENPTVTGTPIQRWLTPGPPRHVQVSLSTGF*
Ga0134127_112345611	3300010399	Terrestrial Soil	WRDFELRGAVRNLFDRRAYTFGTFAANPTAPGSPVQRWLTPGLPRHVQVSVSSDF*
Ga0134123_127260741	3300010403	Terrestrial Soil	GAVRNLFDRSVFTFGTFAENATVPGSPVQRWLTPGLPRHMQVSVSSDF*
Ga0137388_103262503	3300012189	Vadose Zone Soil	GTYAENPTRPGNPVERWLTPGLPRHLTVSLSSDF*
Ga0137364_105545702	3300012198	Vadose Zone Soil	GNLFDRRYYSFGTFAENPTAPGTPVQRWLTPGPPRHVQLSLSTDF*
Ga0137364_108004691	3300012198	Vadose Zone Soil	DRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQVSLSTDF*
Ga0137364_111478312	3300012198	Vadose Zone Soil	RDFELRGAVRNLFDRRVYTFGTFAENPTVPGSAVQRWLTPGPPRHVQISLSTDF*
Ga0137382_109774311	3300012200	Vadose Zone Soil	RRLSDYAVADLSLTLTWRDLELRGAVRNMFDRRVFNFGTFAENPTAPGTPVQRWLTPALPRHVQVSLSTDF*
Ga0137363_100563614	3300012202	Vadose Zone Soil	FGTFAENATVPGSPVQRWLTPGLPRHVQVSVSSDF*
Ga0137399_100338761	3300012203	Vadose Zone Soil	GTYAQNPTRPGNPVERWLTPGLPRHLVVSLSTDF*
Ga0137374_100050461	3300012204	Vadose Zone Soil	NLFDRRVVTFGTFAENPTAPGSPVQRWLTPGPPRHVQVSLSTDF*
Ga0137381_108531572	3300012207	Vadose Zone Soil	MVRNVTGRRTTTFGTWAENPADPGSPVQRFLTPGQPRNFEVSVSADF*
Ga0137381_111316551	3300012207	Vadose Zone Soil	GAVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPGPPRHMQVSLSADF*
Ga0137381_116276911	3300012207	Vadose Zone Soil	DRRVYTFGTFAENPTAPGSPVQRWLTPGPPRHVQISLSTDF*
Ga0137370_100792901	3300012285	Vadose Zone Soil	RDFELRGAVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQVSLSTDF*
Ga0137386_109115432	3300012351	Vadose Zone Soil	GAVRNLFDRRAYTFGTFTENPTAPGSPVQRWLMPGPPRHVQVSLSTDF*
Ga0137371_108505861	3300012356	Vadose Zone Soil	NVLDHRYFNFGTFAENPTEPGTPVQRWLTPGVPRSVQVSLSTDF*
Ga0137384_100502614	3300012357	Vadose Zone Soil	AVRNLFDRRVFNFGTFAENPTAPGTPVQRWLTPGLPRHVQVSVNADF*
Ga0137368_108118281	3300012358	Vadose Zone Soil	ELRAMVRNALGTRYFSFGTFAENPTVPGTPVQRWLTPGVPRSVQVSLSTDF*
Ga0137368_108735761	3300012358	Vadose Zone Soil	ELRAMVRNALGTRYFSFGTFAENPTVPGTPVQRWLTPGVPRHLQLSLSADF*
Ga0137390_117400001	3300012363	Vadose Zone Soil	LTWGDFELRGAVRNLFDRRVYTFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSTDF*
Ga0134054_12889422	3300012390	Grasslands Soil	NLFDRRAYTFGTFAENPTAPGSPVQRWLTPGPPRHVQVSLSADF*
Ga0137358_110090111	3300012582	Vadose Zone Soil	DRRVFTFGTFAENRTAPGSPVQRWLTPGLPRHVQVSVSRDF*
Ga0137359_100102417	3300012923	Vadose Zone Soil	SVTLTWRDFELRGAVRNLFDRSVFTFGTFAENATVPGSPVQRWLTPGLPRHVQVSVSTDF
Ga0137416_104533172	3300012927	Vadose Zone Soil	FDRSVFTFGTFAENATVPGSPVQRWLTPGLPRHVRVSVSTDF*
Ga0134077_102427001	3300012972	Grasslands Soil	RRVYTFGTFAENPTVPGSPVQRWLTPGPPRHVQISLSTDF*
Ga0134076_100959511	3300012976	Grasslands Soil	ADYGVADAAATVTWRSLELRCMVRNLLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHVTVSLSSDF*
Ga0134076_101328942	3300012976	Grasslands Soil	TWRSLELRCMVRNLLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHLTVSLSTDF*
Ga0134073_101168432	3300015356	Grasslands Soil	FGTFAENPTVAGSPVQRWLTPGPPRHVQISLSTDF*
Ga0134072_100004601	3300015357	Grasslands Soil	LTLAWRELELRCTAGNLFDLRYYSFGTFAENPTAPGTPVQRWLTPGPPRHVQLSLSTDF*
Ga0134072_102665312	3300015357	Grasslands Soil	VADLSLTLAWRELELRCTVGNLFARRYFSFGAFAENPTAPGTPVERWLTPGPPRHLQVSVSTDF*
Ga0134089_100647671	3300015358	Grasslands Soil	AVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPGPPRHVQVSLSADF*
Ga0134085_101783931	3300015359	Grasslands Soil	VRNLFDRRVFNFGTFAENPTTPGTPVQRWLTPGPPRHVQVSLSTDF*
Ga0134069_12998402	3300017654	Grasslands Soil	WRDFELRGAVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPGPPRHVQVSLSADF
Ga0134112_101342212	3300017656	Grasslands Soil	DRRVYTFGTFAENATAPGSPVQRWLTPGPPRHVQISLSTDF
Ga0134112_102014041	3300017656	Grasslands Soil	ELRCMVRNLLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHVTVSLSSDF
Ga0134083_100013121	3300017659	Grasslands Soil	LDHRYFNFGTFAENPTEPGTPVQRWLTPGVPRSVQLSLSTDF
Ga0134083_103520701	3300017659	Grasslands Soil	ELRGAVRNLFDRRVYTFGTFAENATAPGTPVQRWLTPGPPRHVQISLSTDF
Ga0187776_116262112	3300017966	Tropical Peatland	LIVRLGGLQIRTAVRNLLDHRYANFGTYAENPTVPGSPVQRWLTPGLPRTVEVSFTREF
Ga0066655_104244621	3300018431	Grasslands Soil	RNLFDRRVYTFGTFAENPTAPGSPVQRWLTPGPPRHVQVSLSADF
Ga0066667_100687704	3300018433	Grasslands Soil	GRYDVRVAIPNVFDRRYVTFGTFAENPTVPGNPVERFVTPGMLRHLLVSVSAEF
Ga0066667_118662911	3300018433	Grasslands Soil	NLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQISLSTDF
Ga0184643_12160751	3300019255	Groundwater Sediment	FNRRVFSFGTFAENPTVAGTPVQRWLTPAPPRHLQVSVSTEF
Ga0207653_100784371	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	RDFELRGAVRNLFDRRVYTFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSTDF
Ga0207665_116105182	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	YVTFGTFAENPTVSGNPVQRFVTPGMPRHLLVSVSAEF
Ga0209234_11348691	3300026295	Grasslands Soil	VRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQVSLSTDF
Ga0209234_11353081	3300026295	Grasslands Soil	VRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPGPPRHVQISLSTDF
Ga0209234_11406472	3300026295	Grasslands Soil	AVADLSLTLAWRELELRCTVGNLFARRYYSFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSTDF
Ga0209234_12101482	3300026295	Grasslands Soil	NATRRLADYGVADAAATVTWRSLELRCMVRNVLDRRYENFGTYAENSTRPGNPVERWLTPGLPRHVQVSLSTDF
Ga0209235_11859762	3300026296	Grasslands Soil	LDRRYVSFGTYAPNPTLPGAPIQRWVTPGLPRHLQLSVSTDF
Ga0209237_10830463	3300026297	Grasslands Soil	RAMVRNVLDHRYFNFGTFAENPTEPGTPVQRWLTPGVPRSVQLSLSTDF
Ga0209237_11271462	3300026297	Grasslands Soil	LTWRDFELRGAVRNLFDGQVFTFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSADF
Ga0209236_11643492	3300026298	Grasslands Soil	VVADLSVTLTWRDFELRGAVRNLFDRSVFTFGTFAENATVPGSPVQRWLTPGLPRHVQVSVSSDF
Ga0209236_12762812	3300026298	Grasslands Soil	VTWRSLELRCMVRNVLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHLTVSLSTDF
Ga0209238_10005461	3300026301	Grasslands Soil	RRYVSFGTYAPNPTLPGARIQRWVTPGLPRHLQLSVSTDF
Ga0209238_12533391	3300026301	Grasslands Soil	ASFGAFAENPLAPGAPVQRFLTPGLPRHLQVSVSAEF
Ga0209154_11692231	3300026317	Soil	RGAVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQISLSTDF
Ga0209152_100996241	3300026325	Soil	LRGAVRNLFDRRYVSFGTFAENPTVTGTPIQRWLTPGPPRHVQVSLSTDF
Ga0209266_12087642	3300026327	Soil	RGAVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQVSLSADF
Ga0209375_10446284	3300026329	Soil	TWRDFELRGAVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPGPPRHVQISLSTDF
Ga0209473_12852491	3300026330	Soil	TWHDLELRAAVRNLFDRSVFTFGTFAENPTVPGNPVERWLTPGLPRHIQLSLSTDF
Ga0209158_10784211	3300026333	Soil	RRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQVSLSADF
Ga0209159_10329544	3300026343	Soil	RGAVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPAPPRHVQVSLSTDF
Ga0209690_10431863	3300026524	Soil	TLGWRELELRAMVQNVLDHRYFNFGTFAENPTEPGTPVQRWLTPGVPRSVQLSLSTDF
Ga0209690_12646751	3300026524	Soil	LRGAVRNLFDRRVYTFGTFAENPTAPGSPVQRWLTPGPPRHMQVSLSADF
Ga0209160_12457151	3300026532	Soil	RNVFDRRYENFGTYAENPTRPGNPVERWLTPGLPRNLQVSLSTDF
Ga0209058_13037321	3300026536	Soil	RGAVRNLFDRRYVSFGTFAENPTVTGTPIQRWLTPGPPRHVQVSLSTDF
Ga0209157_11416033	3300026537	Soil	WHDLELRAAVRNLFDRSVFTFGTFAENPTVPGNPVERWLTPGLPRHIQLSLSTDF
Ga0209056_103103411	3300026538	Soil	VTWRSLELRCMVRNVFDRRYENFGTYAENPTRPGNPVERWLTPGLPRHLQVSLSSDF
Ga0209805_11866191	3300026542	Soil	FGTFAANPTVAGDPVQRFLTPGVPRHVLLSLSTDF
Ga0209161_100185527	3300026548	Soil	GAVRNLLDRRDFSFGTFAENPTAPGTPVQRWLTPGPPRHVQVSLSADF
Ga0208995_10469691	3300027388	Forest Soil	VRNLFDRRVFTFGTFAENRTAPGSPVQRWLTPGLPRHVQVSVSRDF
Ga0209689_10096521	3300027748	Soil	TVTWRSLELRCMVRNVLDRRYENFGTYAENPTRPGNPVERWLTPGLPRHVQVSLSTDF
Ga0209074_104143431	3300027787	Agricultural Soil	ADLSLTAGWRELELRCAVGNLFDRRYVNFGTFAENPTAPGAPVQRWLTPGLPRHVQVSLSRDF
Ga0307504_101466222	3300028792	Soil	VRNLFDRRVFTFGTFAENATVPGSPVQRWLTPGLPRHVQVSVSSDF
Ga0307312_107865782	3300028828	Soil	VFSFGTFAENPTVAGTPVQRWLTPAPPRHLQVSVSTEF
Ga0307278_102095051	3300028878	Soil	AFNFGTFAENPTVAGTPVQRWLTPGLPRHVQVSLSADF
Ga0307469_118208711	3300031720	Hardwood Forest Soil	FGTWAENPMDPGSPVQRFLTPGQPRNVEVSVSAEF
Ga0307479_103599731	3300031962	Hardwood Forest Soil	EANVTRRLADYAVADGSVTLGWREFEVRAMLRNAFDGRYFSFGTFAANATVPGAPVQRWLTPGLPRSVQLSLSTDF
Ga0307471_1034390832	3300032180	Hardwood Forest Soil	GNLFDRSVFTFGTFAENATVPGSPVQRWLTPGLPRHVQVSVSSDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037852

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences