NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F038132

Metagenome Family F038132

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F038132
Family Type Metagenome
Number of Sequences 166
Average Sequence Length 50 residues
Representative Sequence IPKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK
Number of Associated Samples 147
Number of Associated Scaffolds 166

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.01 %
% of genes near scaffold ends (potentially truncated) 95.78 %
% of genes from short scaffolds (< 2000 bps) 87.35 %
Associated GOLD sequencing projects 141
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.181 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(9.036 % of family members)
Environment Ontology (ENVO) Unclassified
(34.940 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(36.145 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.00%    β-sheet: 0.00%    Coil/Unstructured: 72.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 166 Family Scaffolds
PF04392ABC_sub_bind 12.05
PF13343SBP_bac_6 6.63
PF13531SBP_bac_11 4.82
PF09084NMT1 4.22
PF13416SBP_bac_8 4.22
PF01934HepT-like 2.41
PF00355Rieske 1.81
PF07883Cupin_2 1.20
PF01909NTP_transf_2 1.20
PF02604PhdYeFM_antitox 0.60
PF0563523S_rRNA_IVP 0.60
PF00296Bac_luciferase 0.60
PF13379NMT1_2 0.60
PF02371Transposase_20 0.60
PF08780NTase_sub_bind 0.60
PF13751DDE_Tnp_1_6 0.60

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 166 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 12.05
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 4.22
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 4.22
COG2361HEPN domain protein, predicted toxin of MNT-HEPN systemDefense mechanisms [V] 2.41
COG2445Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 familyGeneral function prediction only [R] 2.41
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.60
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.60
COG3547TransposaseMobilome: prophages, transposons [X] 0.60
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.60


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.18 %
UnclassifiedrootN/A4.82 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2044078000|ZMB_F548DK201AZ75QAll Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium520Open in IMG/M
3300000793|AF_2010_repII_A001DRAFT_10089745All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria652Open in IMG/M
3300000955|JGI1027J12803_103903234All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300003987|Ga0055471_10287365All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium526Open in IMG/M
3300004013|Ga0055465_10152333All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria733Open in IMG/M
3300004050|Ga0055491_10106124All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300004052|Ga0055490_10057313All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300004114|Ga0062593_100312675All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1347Open in IMG/M
3300004463|Ga0063356_100538926All Organisms → cellular organisms → Bacteria1557Open in IMG/M
3300004463|Ga0063356_105333385All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria552Open in IMG/M
3300004463|Ga0063356_106278983All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium509Open in IMG/M
3300004780|Ga0062378_10065448All Organisms → cellular organisms → Bacteria → Proteobacteria832Open in IMG/M
3300005171|Ga0066677_10708685All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium562Open in IMG/M
3300005180|Ga0066685_10766712All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria656Open in IMG/M
3300005294|Ga0065705_10185780All Organisms → cellular organisms → Bacteria1539Open in IMG/M
3300005294|Ga0065705_10283485All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1095Open in IMG/M
3300005294|Ga0065705_11125392Not Available506Open in IMG/M
3300005331|Ga0070670_100080952All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2791Open in IMG/M
3300005332|Ga0066388_100385753All Organisms → cellular organisms → Bacteria → Proteobacteria2047Open in IMG/M
3300005332|Ga0066388_102710909All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300005339|Ga0070660_101270604All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria624Open in IMG/M
3300005353|Ga0070669_100010561All Organisms → cellular organisms → Bacteria → Proteobacteria6556Open in IMG/M
3300005471|Ga0070698_102004626All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria532Open in IMG/M
3300005518|Ga0070699_101827582All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria556Open in IMG/M
3300005530|Ga0070679_100823298All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria871Open in IMG/M
3300005536|Ga0070697_100565410All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria998Open in IMG/M
3300005536|Ga0070697_101844999All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium541Open in IMG/M
3300005545|Ga0070695_100347346All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1110Open in IMG/M
3300005713|Ga0066905_100213861All Organisms → cellular organisms → Bacteria1452Open in IMG/M
3300005719|Ga0068861_101806819All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria606Open in IMG/M
3300005764|Ga0066903_108179794All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria535Open in IMG/M
3300005836|Ga0074470_10342164All Organisms → cellular organisms → Bacteria16732Open in IMG/M
3300005843|Ga0068860_100795869All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria959Open in IMG/M
3300005879|Ga0075295_1033479All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium650Open in IMG/M
3300005889|Ga0075290_1000325All Organisms → cellular organisms → Bacteria5423Open in IMG/M
3300006034|Ga0066656_10672830All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium666Open in IMG/M
3300006844|Ga0075428_102741650All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300006845|Ga0075421_102408506All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300006852|Ga0075433_11408108All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria603Open in IMG/M
3300006931|Ga0097620_100659984All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1138Open in IMG/M
3300009012|Ga0066710_102705986All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria707Open in IMG/M
3300009012|Ga0066710_102985509All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria659Open in IMG/M
3300009094|Ga0111539_11612911All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria752Open in IMG/M
3300009100|Ga0075418_12520315All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria561Open in IMG/M
3300009137|Ga0066709_103343490All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium583Open in IMG/M
3300009157|Ga0105092_10544229Not Available668Open in IMG/M
3300009162|Ga0075423_10038541All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium4877Open in IMG/M
3300009162|Ga0075423_10215328All Organisms → cellular organisms → Bacteria2014Open in IMG/M
3300009168|Ga0105104_10655140All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300009444|Ga0114945_10270436All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria996Open in IMG/M
3300009609|Ga0105347_1270404All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria704Open in IMG/M
3300009678|Ga0105252_10244532All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300010047|Ga0126382_10376361All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1098Open in IMG/M
3300010047|Ga0126382_11090857All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria707Open in IMG/M
3300010047|Ga0126382_12373272All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria514Open in IMG/M
3300010166|Ga0126306_11410521All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria576Open in IMG/M
3300010358|Ga0126370_10490578All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1035Open in IMG/M
3300010358|Ga0126370_12396792All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium524Open in IMG/M
3300010373|Ga0134128_11402266All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria769Open in IMG/M
3300010375|Ga0105239_13274162All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria527Open in IMG/M
3300010397|Ga0134124_10525933All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1148Open in IMG/M
3300010398|Ga0126383_13405573All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300010399|Ga0134127_10247032All Organisms → cellular organisms → Bacteria1688Open in IMG/M
3300010401|Ga0134121_10786217All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria912Open in IMG/M
3300010868|Ga0124844_1200603All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria730Open in IMG/M
3300011420|Ga0137314_1066773All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium873Open in IMG/M
3300011428|Ga0137456_1071409Not Available860Open in IMG/M
3300011435|Ga0137426_1027626All Organisms → cellular organisms → Bacteria1411Open in IMG/M
3300011437|Ga0137429_1078431All Organisms → cellular organisms → Bacteria987Open in IMG/M
3300012134|Ga0137330_1030753All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300012179|Ga0137334_1037570All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300012198|Ga0137364_11311619All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium539Open in IMG/M
3300012200|Ga0137382_10641066All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria760Open in IMG/M
3300012200|Ga0137382_10972334All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria610Open in IMG/M
3300012203|Ga0137399_10768591All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria811Open in IMG/M
3300012204|Ga0137374_10980285All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300012206|Ga0137380_10679794All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria895Open in IMG/M
3300012207|Ga0137381_11662576Not Available529Open in IMG/M
3300012211|Ga0137377_11725660All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium547Open in IMG/M
3300012285|Ga0137370_10102056All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1616Open in IMG/M
3300012362|Ga0137361_10372803All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1310Open in IMG/M
3300012501|Ga0157351_1021096All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria692Open in IMG/M
3300012501|Ga0157351_1027704Not Available642Open in IMG/M
3300012922|Ga0137394_10574243All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria955Open in IMG/M
3300012923|Ga0137359_10046729All Organisms → cellular organisms → Bacteria3760Open in IMG/M
3300012929|Ga0137404_10303843All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1385Open in IMG/M
3300012929|Ga0137404_10347387All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1297Open in IMG/M
3300012930|Ga0137407_10478827All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1161Open in IMG/M
3300012948|Ga0126375_11976256All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria514Open in IMG/M
3300012986|Ga0164304_10794679All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria729Open in IMG/M
3300012988|Ga0164306_10283080All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1202Open in IMG/M
3300013100|Ga0157373_10339649All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1070Open in IMG/M
3300014268|Ga0075309_1001146All Organisms → cellular organisms → Bacteria4781Open in IMG/M
3300014270|Ga0075325_1024167All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1164Open in IMG/M
3300014271|Ga0075326_1097648All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria825Open in IMG/M
3300014295|Ga0075305_1049818All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium770Open in IMG/M
3300014308|Ga0075354_1149479All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300014311|Ga0075322_1005223All Organisms → cellular organisms → Bacteria2339Open in IMG/M
3300014870|Ga0180080_1061523All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300014883|Ga0180086_1143453All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium621Open in IMG/M
3300014969|Ga0157376_10021155All Organisms → cellular organisms → Bacteria5049Open in IMG/M
3300015259|Ga0180085_1047564All Organisms → cellular organisms → Bacteria1223Open in IMG/M
3300015372|Ga0132256_100161185All Organisms → cellular organisms → Bacteria2261Open in IMG/M
3300015374|Ga0132255_105333740All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria544Open in IMG/M
3300017659|Ga0134083_10196883Not Available830Open in IMG/M
3300018051|Ga0184620_10307717All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300018056|Ga0184623_10485403All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium529Open in IMG/M
3300018068|Ga0184636_1351314All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium515Open in IMG/M
3300018079|Ga0184627_10448910All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300018422|Ga0190265_10143654All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2322Open in IMG/M
3300018422|Ga0190265_10281762All Organisms → cellular organisms → Bacteria1724Open in IMG/M
3300018433|Ga0066667_11215871All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria656Open in IMG/M
3300018466|Ga0190268_10810359All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300018920|Ga0190273_10336737All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1029Open in IMG/M
3300019356|Ga0173481_10685598All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria551Open in IMG/M
3300020006|Ga0193735_1134989All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria657Open in IMG/M
3300020197|Ga0194128_10373337All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria687Open in IMG/M
3300021051|Ga0206224_1002977All Organisms → cellular organisms → Bacteria1706Open in IMG/M
3300021063|Ga0206227_1115602All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300024056|Ga0124853_1193617All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2152Open in IMG/M
3300025791|Ga0210115_1090973All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium622Open in IMG/M
3300025906|Ga0207699_10864252All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria666Open in IMG/M
3300025911|Ga0207654_10199638All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1316Open in IMG/M
3300025921|Ga0207652_10094747All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2629Open in IMG/M
3300025922|Ga0207646_10183123All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1892Open in IMG/M
3300025981|Ga0207640_10748826All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria842Open in IMG/M
3300026003|Ga0208284_1016298All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300026011|Ga0208532_1011644All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium600Open in IMG/M
3300026020|Ga0208531_1003946All Organisms → cellular organisms → Bacteria1285Open in IMG/M
3300026044|Ga0208287_1001448All Organisms → cellular organisms → Bacteria → Proteobacteria2595Open in IMG/M
3300026058|Ga0208421_1004289All Organisms → cellular organisms → Bacteria1161Open in IMG/M
3300026058|Ga0208421_1030322All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium507Open in IMG/M
3300026089|Ga0207648_12086750All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria528Open in IMG/M
3300026314|Ga0209268_1102630All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria777Open in IMG/M
3300026326|Ga0209801_1005081All Organisms → cellular organisms → Bacteria → Proteobacteria7302Open in IMG/M
3300026524|Ga0209690_1030579All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2591Open in IMG/M
3300026536|Ga0209058_1253518All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium617Open in IMG/M
3300026538|Ga0209056_10591401All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium560Open in IMG/M
3300026547|Ga0209156_10355128All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria631Open in IMG/M
3300027395|Ga0209996_1013767All Organisms → cellular organisms → Bacteria1095Open in IMG/M
3300027511|Ga0209843_1070798Not Available602Open in IMG/M
3300027650|Ga0256866_1065429All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300027650|Ga0256866_1089305All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300027722|Ga0209819_10236447All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300027831|Ga0209797_10096155All Organisms → cellular organisms → Bacteria1294Open in IMG/M
3300027843|Ga0209798_10025347All Organisms → cellular organisms → Bacteria3152Open in IMG/M
3300027843|Ga0209798_10237921Not Available888Open in IMG/M
3300027886|Ga0209486_11249204All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria512Open in IMG/M
3300028145|Ga0247663_1103468All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria522Open in IMG/M
3300028380|Ga0268265_10912988All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria863Open in IMG/M
3300028814|Ga0307302_10138819All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1174Open in IMG/M
(restricted) 3300031150|Ga0255311_1077047All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300031229|Ga0299913_10049399All Organisms → cellular organisms → Bacteria4015Open in IMG/M
3300031740|Ga0307468_100324986All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1132Open in IMG/M
3300031854|Ga0310904_10931290All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria615Open in IMG/M
3300032126|Ga0307415_101017209All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria771Open in IMG/M
3300032180|Ga0307471_100124958All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2408Open in IMG/M
3300032421|Ga0310812_10241281All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria793Open in IMG/M
3300033412|Ga0310810_10630639All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1019Open in IMG/M
3300033412|Ga0310810_11179159All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria624Open in IMG/M
3300033433|Ga0326726_11220951All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium731Open in IMG/M
3300033487|Ga0316630_12143028All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300034115|Ga0364945_0071286All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300034149|Ga0364929_0050041All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300034151|Ga0364935_0042955All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1301Open in IMG/M
3300034178|Ga0364934_0178253All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium805Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.43%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil6.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.42%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands5.42%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.22%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.22%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.22%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands3.01%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil3.01%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.01%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment2.41%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.41%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.41%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.41%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.41%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.41%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.41%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.81%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil1.20%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.20%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.20%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment1.20%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.20%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.20%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.60%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.60%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.60%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.60%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.60%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.60%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.60%
Switchgrass, Maize And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Switchgrass, Maize And Miscanthus Rhizosphere0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.60%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.60%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.60%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.60%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.60%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.60%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.60%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.60%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.60%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2044078000Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, ILEnvironmentalOpen in IMG/M
3300000793Forest soil microbial communities from Amazon forest - 2010 replicate II A001EnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300004013Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2EnvironmentalOpen in IMG/M
3300004050Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2EnvironmentalOpen in IMG/M
3300004052Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004780Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1FreshEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005879Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301EnvironmentalOpen in IMG/M
3300005889Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300009678Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010868Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)EnvironmentalOpen in IMG/M
3300011420Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2EnvironmentalOpen in IMG/M
3300011428Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2EnvironmentalOpen in IMG/M
3300011435Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2EnvironmentalOpen in IMG/M
3300011437Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2EnvironmentalOpen in IMG/M
3300012134Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT142_2EnvironmentalOpen in IMG/M
3300012179Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012501Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300014268Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1EnvironmentalOpen in IMG/M
3300014270Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1EnvironmentalOpen in IMG/M
3300014271Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2EnvironmentalOpen in IMG/M
3300014295Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D1EnvironmentalOpen in IMG/M
3300014308Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1EnvironmentalOpen in IMG/M
3300014311Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1EnvironmentalOpen in IMG/M
3300014870Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10DEnvironmentalOpen in IMG/M
3300014883Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10DEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015259Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10DEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020197Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65mEnvironmentalOpen in IMG/M
3300021051Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos A1EnvironmentalOpen in IMG/M
3300021063Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos D4EnvironmentalOpen in IMG/M
3300024056Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300025791Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026003Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201 (SPAdes)EnvironmentalOpen in IMG/M
3300026011Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301 (SPAdes)EnvironmentalOpen in IMG/M
3300026020Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403 (SPAdes)EnvironmentalOpen in IMG/M
3300026044Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026058Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027395Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027511Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027650Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeqEnvironmentalOpen in IMG/M
3300027722Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027831Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027843Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300028145Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ZMB_18903102044078000Switchgrass, Maize And Miscanthus RhizosphereMRIDIPKDKVPRGNRRPEVDDGRTPFVDRAEWMDQEPITKFIKEVLEQRKR
AF_2010_repII_A001DRAFT_1008974513300000793Forest SoilGNRRPEGDDNRFPFVDRAEWMDMEPIRKFVKDTLEQRKK*
JGI1027J12803_10390323423300000955SoilPRGNRRPEVDDGRTPFVDRAEWMDQEPITKFIKEVLEQRKR*
Ga0055471_1028736513300003987Natural And Restored WetlandsGQIAYQRIFTEGNDGPDSMRVDIPKDKVPRGNRRPQGDPNRYLFVDRAEWMDQAPIRKFVKEVLAARKK*
Ga0055465_1015233313300004013Natural And Restored WetlandsNDGPDSLRIDIPKDKVPPGNRRPQKDPNRYPFVDRAEWMDMSSIRKFLKETMAERKR*
Ga0055491_1010612423300004050Natural And Restored WetlandsIPKDKVPRGNRRPPGDPNRYLFVDRAEWMDQGPIRKFIKDALSQRK*
Ga0055490_1005731313300004052Natural And Restored WetlandsIDIPKDKVPPGNRRPQKDPNRYPFVDRAEWMDMSSIRKFLKETMEQRKR*
Ga0062593_10031267523300004114SoilKDKVPRGNRRPEVDDGRAPFVDRAEWMDQEPITKFIKEVLEQRKK*
Ga0063356_10053892633300004463Arabidopsis Thaliana RhizosphereRLFTQGNDGPDSMRIDIPKDKVPRGNRRPEVDDGRAPFVDRAEWMDQEPITKFIKEVLAERRK*
Ga0063356_10533338523300004463Arabidopsis Thaliana RhizosphereRLFTQGNDGPDSMRIDIPKDKVPRGNRRPEVDDGRAPFVDRAEWMDQEPITKFIKEVLEQRKK*
Ga0063356_10627898313300004463Arabidopsis Thaliana RhizosphereTQGNDGPDSMRIDIPKDKVPRGNRRPATDDGRTPFVDRAEWMDQEPITKFIKEVLEQRRK
Ga0062378_1006544813300004780Wetland SedimentPRGNRRPEVDDGRTPFVDRAEWMDQEPITKFVKEALEQRKK*
Ga0066677_1070868513300005171SoilQRIFTQGNDGPDSLRIDIPKEKVPRGNRRPQVDPNRYPFVDRAEWMDQEPIRKFVKEVMEQRKR*
Ga0066685_1076671223300005180SoilKVPRGNRRPQADPNRYPFVDRAEWMDQEPIRKFVKEVMEQRRK*
Ga0065705_1018578033300005294Switchgrass RhizosphereGNDGPDSMRIDIPKDKVPRGNRRPATDDGRTPFVDRAEWMDQEPITKFIKEVLEQRKR*
Ga0065705_1028348513300005294Switchgrass RhizosphereDIPKDKVPRGNRRPEVDDGRTPFVDRAEWMDQEPITKFIKEVLEERKK*
Ga0065705_1112539213300005294Switchgrass RhizospherePKDKVPRGNRRPEVDDGRTPFVDRAEWMDQEPITKFIKEVLEERKK*
Ga0070670_10008095233300005331Switchgrass RhizosphereQGNDGPDSLRIDIAKDKVPRGNRRPDGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0066388_10038575313300005332Tropical Forest SoilRIDIPKDKVPSGNRRPEGDENRYPFVDRAEWMDMEPIRKFIKETLEQRKK*
Ga0066388_10271090923300005332Tropical Forest SoilGNRRPEGDDNRYPFVDRAEWMDMESIRKFVKETLEQRKK*
Ga0070660_10127060413300005339Corn RhizospherePRGNRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0070669_10001056113300005353Switchgrass RhizosphereGNRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0070698_10200462613300005471Corn, Switchgrass And Miscanthus RhizosphereKVPRGNRRPEGADENRYPFVDRAEWMDQAQISKFVKEVLEQRRK*
Ga0070699_10182758223300005518Corn, Switchgrass And Miscanthus RhizosphereKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRRK*
Ga0070679_10082329823300005530Corn RhizosphereKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKK*
Ga0070697_10056541013300005536Corn, Switchgrass And Miscanthus RhizosphereKVPRGNRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0070697_10184499913300005536Corn, Switchgrass And Miscanthus RhizosphereYQRIFTTGEEGPDSLRIDIPKDKVPRGNKRPEGADENRYPFVDRAEWMDQAPISKFVREVLEQRKR*
Ga0070695_10034734623300005545Corn, Switchgrass And Miscanthus RhizosphereRIDIPKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0066905_10021386133300005713Tropical Forest SoilPSGNRRPEGGDNRYPFVDRAEWMDMESIRKFVKETLEQRKK*
Ga0068861_10180681923300005719Switchgrass RhizosphereEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0066903_10817979413300005764Tropical Forest SoilGPDSLRIDIPKDKVPSGNRRPEGDDNRYPFVDRAEWMDMEPIRKFVKETLEQRKK*
Ga0074470_1034216413300005836Sediment (Intertidal)GNRRPEGDENRYPFVDRAEWMDQAPISKFVREVLEQRRK*
Ga0068860_10079586913300005843Switchgrass RhizospherePDGDENRYPFVDRAEWMDQAPIAKFVKEVLEQRKK*
Ga0075295_103347913300005879Rice Paddy SoilMAYQRIFTEGNDGPDSMRVDIAKDKVPRGNRRPQGDPNRYLFVDRAEWMDQAPIRKFVKEALAERKK*
Ga0075290_100032553300005889Rice Paddy SoilRGNRRPQGDPNRYLFVDRAEWMDQAPIRKFVKEALAERKK*
Ga0066656_1067283013300006034SoilDSLRIDIPKDKVPSGNRRPEGDENRYPFVDRAEWMDQAPISKFVREVLEQRRK*
Ga0075428_10274165023300006844Populus RhizosphereEVDDGRTPFVDRAEWMDQEPITKFIKEVLEQRKK*
Ga0075421_10240850613300006845Populus RhizosphereLRIDIPKDKIPRGNRRPEGNESKYPVVDRAEWMDMTSIRAFTKEVLEQRKK*
Ga0075433_1140810813300006852Populus RhizospherePRGNRRPEGDENRYPFVDRAEWMDQAPITKFVKDVLEQRKR*
Ga0097620_10065998423300006931Switchgrass RhizosphereDSLRIDIPKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0066710_10270598623300009012Grasslands SoilEGQIAYQRIFTQGNDGPDSLRIDIPKEKVPRGNRRPQADLNRYPFVDRAEWMDQEPIRKFVKEVMEQRRK
Ga0066710_10298550913300009012Grasslands SoilEKVPRGNRRPQADPNRYPFVDRAEWMDQEPIRKFVKEVMEQRRK
Ga0111539_1161291113300009094Populus RhizosphereDKVPRGNRRPEGADENRYPFVDRAEWMDQAPISKFVKEVLEQRRK*
Ga0075418_1252031513300009100Populus RhizospherePKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKK*
Ga0066709_10334349023300009137Grasslands SoilEGQIAYQRIFTQGNDGPDSLRIDIPKEKVPRGNRRPQADLNRYPFVDRAEWMDQEPIRKFVKEVMEQRRK*
Ga0105092_1054422923300009157Freshwater SedimentNRRPEGDPNRYTFVDRAEWMDMSSIRSFLKDVMEQRKR*
Ga0075423_1003854143300009162Populus RhizosphereLFTQGNDGPDSLRIDIAKDKVPRGNRRPDGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0075423_1021532843300009162Populus RhizosphereRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKK*
Ga0105104_1065514013300009168Freshwater SedimentNRRPDDDENKYPAVDRPEWMDMSSIRKFVKEVLEQRRK*
Ga0114945_1027043623300009444Thermal SpringsPDSLRIDIPKDKVPRGNRRPVADPNRYPFVDRAEWMDQAPIRKFVKEMLEQRRK*
Ga0105347_127040423300009609SoilMRIDIPKDKVPRGNRRPEVDDGRAPFVDRAEWMDQEPITKFIKEVLEQRKK*
Ga0105252_1024453213300009678SoilRPDGADENRYPFVDRAEWMDQAPISKFVKEVLEQRRR*
Ga0126382_1037636113300010047Tropical Forest SoilNRRPEGDDNRYPFVDRAEWMDMEPIRKFVKETLEQRKK*
Ga0126382_1109085713300010047Tropical Forest SoilEGDDNRYPFVDRAEWMDMEPIRKFVKETLEQRKK*
Ga0126382_1237327213300010047Tropical Forest SoilDIPKDKVPSGNRRPEGDDNRYPFVDRAEWMDMESIRKFVKETLEQRKK*
Ga0126306_1141052123300010166Serpentine SoilLLTREGQAIYQRLFTLGEEGPDSLRTDVPKDKVPRGNRRPEGDETRYPFVDRAEWMDMEPIRKFVKENMKR*
Ga0126370_1049057813300010358Tropical Forest SoilIDIPKDKAPSGNRRPEGNDNRYPFVDRAEWMDMESIRKFVKDTLEQRKK*
Ga0126370_1239679213300010358Tropical Forest SoilSGNRRPEGDDNRYPFVDRAEWMDMESIRKFVKETLEQRKK*
Ga0134128_1140226613300010373Terrestrial SoilIPKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0105239_1327416223300010375Corn RhizosphereAYQRLFTQGNDGPDSLRIDIAKDKVPRGNRRPDGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0134124_1052593313300010397Terrestrial SoilRPEGDENRYPFVDRAEWVDQAPISKFVKEVLELRRK*
Ga0126383_1340557313300010398Tropical Forest SoilRPEGDDNRYPFVDRAEWMDMESIRKFVKETLEQRKK*
Ga0134127_1024703233300010399Terrestrial SoilAYQRLFTQGNDGPDSMRIDIPKDKVPRGNRRPEVDDGRAPFVDRAEWMDQEPITKFIKEVLAERRK*
Ga0134121_1078621723300010401Terrestrial SoilAYQRLFTQGNDGPDSMRIDIPKDKVPRGNRRPEVDDGRAPFVDRAEWMDQEPITKFVKEVLEQRKR*
Ga0124844_120060313300010868Tropical Forest SoilPDSLRIDIPKDKVPRGNRRPQADPNRYPFVDRPEWMDQEPIRKFVKEVLEQRKR*
Ga0137314_106677313300011420SoilGPDSLRIDIPKEKVPRGNRRPQADPNRYPFVDRAEWMDMSSIRSFLKDVMEQRKR*
Ga0137456_107140913300011428SoilPANADETRYPFVDRAEWMDQEPIRKFVKEMLEQRRK*
Ga0137426_102762613300011435SoilPGNRRPDGDENRYPSVDRAEWMDQAPITKFVKEVLEQRRK*
Ga0137429_107843113300011437SoilVPPGNRRPDGDENRYPSVDRAEWMDQAPITKFVKEVLEQRRK*
Ga0137330_103075333300012134SoilRIDIPKDKVPRGNRRPEVDDGRAPFVDRAEWMDQTPIRNFVKEMLEQRRK*
Ga0137334_103757033300012179SoilIAYHRVFTVGEEGPDSLRIDIPEDKVPRGNRRPEGADENRYPFVDRAEWMDQAPISKFVKEVWEQRRK*
Ga0137364_1131161913300012198Vadose Zone SoilDGPDSLRIDIPKDKVPRGNRRPQADPNRYPFVDRAEWMDQEPIRKFVKEVMEQRKR*
Ga0137382_1064106613300012200Vadose Zone SoilPKDKVPQGNRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKR*
Ga0137382_1097233413300012200Vadose Zone SoilKVPRGNRRPEGDESRYPFVDRAEWMDQAPISKFVKEVLEKRKR*
Ga0137399_1076859113300012203Vadose Zone SoilIPKDKVPPGNRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKR*
Ga0137374_1098028513300012204Vadose Zone SoilDGPDSLRIDIPKDKVPQGNRRPDGDESRYPFVDRAEWMDQAPISKFVREVLEQRKR*
Ga0137380_1067979423300012206Vadose Zone SoilLRIDIPKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKK*
Ga0137381_1166257613300012207Vadose Zone SoilRGNRRPQADLNRYPFVDRAEWMNQEPIRKFVKEVMEQRRK*
Ga0137377_1172566023300012211Vadose Zone SoilSLRIDIPKDKVPSGNRRPEGDENRYPFVDRAEWMDQAPISKFVREVLEQRRK*
Ga0137370_1010205613300012285Vadose Zone SoilRIFTQGNDGPDSLRIDIPKEKVPRGNRRTQADPNRYPFVDRAEWMDQEPIRKFVKEVMEQRKR*
Ga0137361_1037280323300012362Vadose Zone SoilPGNRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKR*
Ga0157351_102109613300012501Unplanted SoilDGPDSLRIDIAKDKVPRGNRRPDGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0157351_102770413300012501Unplanted SoilNVPRGNRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKR*
Ga0137394_1057424323300012922Vadose Zone SoilDGPDSMRVDIPKDKVPHGNRRPEGDDSRVMFVDRAEWMDQAPISKFVKEVLEQRKK*
Ga0137359_1004672913300012923Vadose Zone SoilIDIPKDKVPPGNRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKR*
Ga0137404_1030384323300012929Vadose Zone SoilDIPKDNVPRGNRRPEDDESRYPFVDRAEWMDQAPISKFVKEVLEQRKR*
Ga0137404_1034738723300012929Vadose Zone SoilRIDIPKDKVPSGNRRPEGDENRYPFVDRAEWMDQAPISKFVREVLEQRRK*
Ga0137407_1047882723300012930Vadose Zone SoilDKVPQGNRRPDGDESRYPFVDRAEWMDQAPISKFVREVLEQRRK*
Ga0126375_1197625613300012948Tropical Forest SoilTQGNDGPDSLRIDIPKDKVPSGNRRPEGDDNRFPFVDRAEWMDMEPIRKFVKDTLEQRKK
Ga0164304_1079467933300012986SoilRIDIPKDKVPRGNRRPENDDGRAPFVDRAEWMDQEPITKFIKEVLEQRKK*
Ga0164306_1028308023300012988SoilRPDGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0157373_1033964923300013100Corn RhizosphereIDIPKDKVPRGNRRPQAEANRYPFVDRPEWMDQEPVRKFVKEVMEERKR*
Ga0075309_100114653300014268Natural And Restored WetlandsPQGDPNRYLFVDRAEWMDQAPIRKFVKEALSQRKK*
Ga0075325_102416723300014270Natural And Restored WetlandsEGQIAYQRIFTEGNDGPDSLRIDIPKDKVPPGNRRPQKDPNRYPFVDRAEWMDMSSIRKFLKETMAERKR*
Ga0075326_109764823300014271Natural And Restored WetlandsPPGNRRPQKDPNRYPFVDRAEWMDMSSIRKFLKETMAERKR*
Ga0075305_104981823300014295Natural And Restored WetlandsMRIDIPKDKVPRSNRRPEVDDGRIPFVDRAEWMDAAPIRKFLREVLSKSKG*
Ga0075354_114947913300014308Natural And Restored WetlandsPPGNRRPDGDENRYPSVDRAEWMDQAPISKFVKEVLERRRK*
Ga0075322_100522333300014311Natural And Restored WetlandsQGDPNRYLFVDRAEWMDQAPIRKFVKEVLAARKK*
Ga0180080_106152313300014870SoilLIDILKDKVPRGNRRPEVDDGRTPFVDRAEWMDQEPITKFIKEVLEQRER*
Ga0180086_114345323300014883SoilRIDIPKDKVPRGNRRPDGDESRYPFVDRAEWMDQEPIRKFVREVLEQRKR*
Ga0157376_1002115553300014969Miscanthus RhizosphereRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0180085_104756423300015259SoilDSLRIDIPKDKVPKGNRRPEADPNRYPFVDRPEWMDQEPIRKFVKEVMEQRRK*
Ga0132256_10016118513300015372Arabidopsis RhizosphereIPKDNVPRGNRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKR*
Ga0132255_10533374013300015374Arabidopsis RhizosphereRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK*
Ga0134083_1019688313300017659Grasslands SoilIAYQKIFTQGNDGPDSLRIDIPKEKVPRGNRRPQADLNRYPFVDRAEWMNQEPIRKFVKEVMEQRRK
Ga0184620_1030771723300018051Groundwater SedimentRPENDDGRTPFVDRAEWMDQEPITKFIKEVLEQRKK
Ga0184623_1048540323300018056Groundwater SedimentFTQGNDGPDSLRIDIPKDKVPRGNRRPDGDESRYPFVDRAEWMDQAPISKFVREVLEQRK
Ga0184636_135131413300018068Groundwater SedimentDGPDSLRIDIPKDKVPRGNRRPEADPNRYPFVDRPEWMDQEPIRKFVKEVMEQRRK
Ga0184627_1044891013300018079Groundwater SedimentYQRLFTQGNDGPDSLRIDIPKDKVPRGNRRPDGDESRYPFVDRAEWMDQAPISKFVREVLERRKR
Ga0190265_1014365413300018422SoilGPDSLRIDIPKDKIPRGNRRPEGNEGKYPVVDRAEWMDQAPISKFVKEVLEQRKK
Ga0190265_1028176213300018422SoilREGQTHYQRIFTTGEEGPDSLRIDIPKDKVPRGNRRPVNADEARYPFVDRAEWMDQEPIRKFVKEILEQRRK
Ga0066667_1121587113300018433Grasslands SoilKVPRGNRRPQADPNRYPFVDRAEWMDQEPIRKFVKEVMEQRRK
Ga0190268_1081035923300018466SoilSREGQMHYQRIFTTGEEGPDSLRIDIPKDKVPRGNRRPVNADEARYPFVDRAEWMDQEPIRKFVKEILEQRRK
Ga0190273_1033673723300018920SoilVPLGNRRPAIDDGRTPFVDRAEWMDQEPITKFIKEVLEQRAK
Ga0173481_1068559813300019356SoilDKVPLGNRRPAIDDGRTPFVDRAEWMDQEPITKFIKEVLEQRTK
Ga0193735_113498923300020006SoilRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKR
Ga0194128_1037333723300020197Freshwater LakeSMRIDIPKDKVPRGNRRPEVDDFRTPFVDRAEWMDQEPISKFVKEVLEKRKG
Ga0206224_100297753300021051Deep Subsurface SedimentSLRIDIPKDKVPRGNRRPEGADENRYLFVDRAEWMDQAPIRNFVKEMLEQRRK
Ga0206227_111560223300021063Deep Subsurface SedimentIAYQRIFTTGEEGPDSLRADIPKDKVPRGNRRPEGADENRYPFVDRAEWMDQTLISKFVREVLEQRRR
Ga0124853_119361733300024056Freshwater WetlandsMAYQRLFTQGNDGPDSMRIDIPKDKVPRGNRRPATDDGRTPFVDRAEWMDQEPITKFIKEVFGATKEVI
Ga0210115_109097313300025791Natural And Restored WetlandsAGQIAYQRIFTEGNDGPDSMRVDIPKDKVPRGNRRPQGDPNRYLFVDRAEWMDQAPIRKFVKEVLAARKK
Ga0207699_1086425223300025906Corn, Switchgrass And Miscanthus RhizosphereKDKVPRGNRRPDNDDGRTPFVDRAEWMDQEPITKFIKEVLEQRKR
Ga0207654_1019963813300025911Corn RhizosphereDSLRIDIPKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK
Ga0207652_1009474713300025921Corn RhizosphereIDIPKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKK
Ga0207646_1018312313300025922Corn, Switchgrass And Miscanthus RhizosphereTQGNDGPDSMRIDIPKDKVPRGNRRPDNDDGRTPFVDRAEWMDQEPITKFIKEVLEQRKR
Ga0207640_1074882623300025981Corn RhizosphereIPKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK
Ga0208284_101629813300026003Rice Paddy SoilKVPRGNRRPQGDPNRYLFVDRAEWMDQAPIRKFVKEALAERKK
Ga0208532_101164423300026011Rice Paddy SoilGQMAYQRIFTEGNDGPDSMRVDIAKDKVPRGNRRPQGDPNRYLFVDRAEWMDQAPIRKFVKEALAERKK
Ga0208531_100394613300026020Rice Paddy SoilDSMRVDIPKDKVPRGNRRPQGDPNRYLFVDRAEWMDQAPIRKFVKEALAERKK
Ga0208287_100144813300026044Natural And Restored WetlandsRPQGDPNRYLFVDRAEWMDQAPIRKFVKEALSQRKK
Ga0208421_100428913300026058Natural And Restored WetlandsEGQMAYQRIFTEGNDGPDSMRVDIPKDKVPRGNRRPQGDPNRYLFVDRAEWMDQAPIRKFVKEALAERKK
Ga0208421_103032213300026058Natural And Restored WetlandsTEGNDGPDSMRVDIPKDKVPRGNRRPQGDPNRYLFVDRAEWMDQAPIRKFVKEVLAARKK
Ga0207648_1208675023300026089Miscanthus RhizosphereRGNRRPENDDGRAPFVDRAEWMDQEPITKFIKEVLEQRKK
Ga0209268_110263023300026314SoilIAYQRIFTQGNDGPDSLRIDIPKEKVPRGNRRPQADPNRYPFVDRAEWMDQEPIRKFVKEVMEQRRR
Ga0209801_100508113300026326SoilPRGNRRPQADLNRYPFVERAEWMDQEPIRKFVKEVMEQRRK
Ga0209690_103057933300026524SoilYQRIFTQGNDGPDSLRIDIPKEKVPRGNRRPQADLNRYPFVDRAEWMDQEPIRKFVKEVMEQRRK
Ga0209058_125351813300026536SoilKEKVPRGNHRPQADPNRYPFVDRAEWMDQEPIRKFVKEVMEQRRR
Ga0209056_1059140123300026538SoilIDIPKEKVPRGNRRPQADPNRYPFVDRAEWMDQEPIRKFVKEVMEQRRR
Ga0209156_1035512823300026547SoilKVPRGNRRRQADPNRYPFVDRAEWMDQEPIRKFVKEVMEQRRR
Ga0209996_101376713300027395Arabidopsis Thaliana RhizosphereQRIFTEGNDGPDSMRVDIPKDKVPRGNRRPQGDPNRYLFVDRAEWMDQAPIRKFVKEALAQRK
Ga0209843_107079823300027511Groundwater SandDIPKDKVPRGNRRPEADPNRYPFVDRAEWMDMESIRKFLKETLEQRKR
Ga0256866_106542923300027650SoilGPDSLRSDIPKDGVPPGNRRPQKDPDRYPSVDRAEWMDMQVIRKFVKESLRR
Ga0256866_108930523300027650SoilSLRIDIPKDKVPRGNRRPQTDPNRYPFVDRAEWMDQAPIRKFIKEAMEQRRK
Ga0209819_1023644713300027722Freshwater SedimentPDGDQNKYPAVDRPEWMDMSSIRKFVKEVLEQRRK
Ga0209797_1009615523300027831Wetland SedimentMRIAIPKDKVPRGNRRPEVDDGRTPFVDRAEWMDQEPITKFVKEALEQRKR
Ga0209798_1002534743300027843Wetland SedimentPKEKVPRGNRRPEPDDGRTPFVDRAEWMDQEPITKFVKEVLEQRKR
Ga0209798_1023792113300027843Wetland SedimentSRRGRMRIAIPKDKVPRGNRRPEVDDGRTPFVDRAEWMDQEPITKFVKEALEQRKR
Ga0209486_1124920423300027886Agricultural SoilPDGADENRYPFVDRAEWMDQAPISKFVKEVLEQRRK
Ga0247663_110346823300028145SoilIDIPKDKVPRGNRRPEVDDGRAPFVDRAEWMDQEPITKFVKEVLEQRKR
Ga0268265_1091298823300028380Switchgrass RhizosphereRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK
Ga0307302_1013881923300028814SoilPRGNRRPEGDENRYPFVDRAEWMDQAPISKFVREVLEQRKR
(restricted) Ga0255311_107704713300031150Sandy SoilMRIDIPKDKVPRGNRRPATDDGRTPFVDRAEWMDQEPISKFIKDVLAQRSR
Ga0299913_1004939913300031229SoilPKDKVPKGNRRSQSDPNRYPSVDRAEWMDQTPIRKFVKEALSQRKK
Ga0307468_10032498623300031740Hardwood Forest SoilNRRPEGDENRYPFVDRAEWMDQAPISKFVKEVLEQRKR
Ga0310904_1093129013300031854SoilNRRPDGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK
Ga0307415_10101720923300032126RhizosphereNRRPAIDDGRTPFVDRAEWMDQEPITKFIKEVLEQRAK
Ga0307471_10012495833300032180Hardwood Forest SoilPDNDDGRTPFVDRAEWMDQEPITKFIKEVLEQRKR
Ga0310812_1024128113300032421SoilSLRIDIPKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK
Ga0310810_1063063923300033412SoilRIDIPKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK
Ga0310810_1117915923300033412SoilKDKVPRGNRRPEGDENRYPFVDRAEWMDQAPITKFVKEVLEQRKK
Ga0326726_1122095133300033433Peat SoilRLFTQGNDGPDSMRIDIPKDKVPRGNRRPEVDDGRTPFVDRAEWMDQEPITKFIKEVLEQRKK
Ga0316630_1214302813300033487SoilKDKIPRGNRRPEGNENKYPVVDRAEWMDMTSIRAFTKDVLEQRKK
Ga0364945_0071286_786_9893300034115SedimentMAYQRLFTQGNDGPDSMRIDIPKDKVPRGNRRPEVDDGRTPFVDRAEWMDQEPITKFIKEVLEQRKK
Ga0364929_0050041_1078_12333300034149SedimentMRIDIPKDKVPRGNRRPEVDDGRTPFVDRAEWMDQEPITKFIKEVLEQRKK
Ga0364935_0042955_1172_13003300034151SedimentVPRGNRRPESDDGRTPFVDRAEWMDQAPISKFVREVLEQRRK
Ga0364934_0178253_3_1313300034178SedimentVPRGNRRPEADPNRYPFVDRPEWMDQEPIRKFVKEVMEQRRK


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