Metagenome / Metatranscriptome Family F038221

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038221
Family Type	Metagenome / Metatranscriptome
Number of Sequences	166
Average Sequence Length	39 residues
Representative Sequence	MMSERFDLIVIGGGSAARDAAGKAAREHGARVALVE
Number of Associated Samples	137
Number of Associated Scaffolds	166

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.19 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.37 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.952 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.711 % of family members)
Environment Ontology (ENVO)	Unclassified (30.120 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.831 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.88% β-sheet: 12.50% Coil/Unstructured: 65.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 166 Family Scaffolds
PF04542	Sigma70_r2	24.10
PF08281	Sigma70_r4_2	13.25
PF00174	Oxidored_molyb	7.83
PF00723	Glyco_hydro_15	7.23
PF04199	Cyclase	6.63
PF04107	GCS2	5.42
PF13490	zf-HC2	5.42
PF07992	Pyr_redox_2	2.41
PF00970	FAD_binding_6	2.41
PF06202	GDE_C	1.81
PF03640	Lipoprotein_15	1.81
PF01344	Kelch_1	1.20
PF13418	Kelch_4	0.60
PF04228	Zn_peptidase	0.60
PF01019	G_glu_transpept	0.60
PF01636	APH	0.60
PF13464	DUF4115	0.60
PF14742	GDE_N_bis	0.60
PF00160	Pro_isomerase	0.60
PF02896	PEP-utilizers_C	0.60
PF13520	AA_permease_2	0.60
PF13964	Kelch_6	0.60
PF01204	Trehalase	0.60
PF09948	DUF2182	0.60

COG ID	Name	Functional Category	% Frequency in 166 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	24.10
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	24.10
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	24.10
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	24.10
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	7.83
COG3915	Uncharacterized conserved protein	Function unknown [S]	7.83
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	7.23
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	6.63
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	1.81
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	1.81
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.60
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG1626	Neutral trehalase	Carbohydrate transport and metabolism [G]	0.60
COG2321	Predicted metalloprotease	General function prediction only [R]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.95 %
Unclassified	root	N/A	12.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.95 %
Unclassified	root	N/A	12.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.95 %
Unclassified	root	N/A	12.05 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.35 %
Unclassified	root	N/A	12.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.31 %
Unclassified	root	N/A	12.05 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.20 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	0.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.05 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.64 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.01 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.60 %
unclassified Candidatus Dormibacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.05 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.43 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.01 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.01 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.43 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.01 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.20 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.60 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.43 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.01 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.20 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.60 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.43 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.01 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	0.60 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.60 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig138422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
2140918013\|NODE_10053_length_1191_cov_7.155332	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300000041\|ARcpr5oldR_c021779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10111738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	573	Open in IMG/M
3300000956\|JGI10216J12902_120563468	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300004114\|Ga0062593_102626494	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300004114\|Ga0062593_103153692	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300004157\|Ga0062590_101967689	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300004479\|Ga0062595_100978016	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300004479\|Ga0062595_101659389	Not Available	599	Open in IMG/M
3300004480\|Ga0062592_101511746	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300005093\|Ga0062594_100428206	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300005093\|Ga0062594_102257204	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005148\|Ga0066819_1022157	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005158\|Ga0066816_1027450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300005178\|Ga0066688_10590095	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005178\|Ga0066688_10965770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300005179\|Ga0066684_11066433	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005406\|Ga0070703_10223563	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300005446\|Ga0066686_10390135	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300005518\|Ga0070699_101292420	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300005535\|Ga0070684_102148488	Not Available	527	Open in IMG/M
3300005535\|Ga0070684_102191007	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005545\|Ga0070695_101310324	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300005545\|Ga0070695_101805726	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005552\|Ga0066701_10078082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1892	Open in IMG/M
3300005557\|Ga0066704_10443643	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300005569\|Ga0066705_10674310	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005575\|Ga0066702_10352153	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300005614\|Ga0068856_100348342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1500	Open in IMG/M
3300005618\|Ga0068864_101819112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300005719\|Ga0068861_100454345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1149	Open in IMG/M
3300005842\|Ga0068858_102052939	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300006046\|Ga0066652_101542018	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300006058\|Ga0075432_10541135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300006581\|Ga0074048_13493390	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300006791\|Ga0066653_10081397	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300006806\|Ga0079220_11301364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	609	Open in IMG/M
3300006854\|Ga0075425_101473579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	769	Open in IMG/M
3300009090\|Ga0099827_11245214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	647	Open in IMG/M
3300009098\|Ga0105245_10601346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1126	Open in IMG/M
3300009100\|Ga0075418_10042029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4935	Open in IMG/M
3300009100\|Ga0075418_11167295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300009137\|Ga0066709_102776870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300009148\|Ga0105243_10313813	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300009545\|Ga0105237_12775075	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300009840\|Ga0126313_10294832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1267	Open in IMG/M
3300010038\|Ga0126315_10756775	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300010041\|Ga0126312_10832453	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300010044\|Ga0126310_10978835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300010147\|Ga0126319_1614169	Not Available	1200	Open in IMG/M
3300010166\|Ga0126306_11009630	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300010304\|Ga0134088_10615427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	541	Open in IMG/M
3300010335\|Ga0134063_10363871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300010336\|Ga0134071_10724285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300010359\|Ga0126376_12064276	Not Available	613	Open in IMG/M
3300010360\|Ga0126372_12790871	All Organisms → cellular organisms → Bacteria → Terrabacteria group	540	Open in IMG/M
3300010364\|Ga0134066_10094025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300010364\|Ga0134066_10138339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300010375\|Ga0105239_12263595	Not Available	632	Open in IMG/M
3300010403\|Ga0134123_13366543	All Organisms → cellular organisms → Bacteria → Terrabacteria group	516	Open in IMG/M
3300011003\|Ga0138514_100158502	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300011400\|Ga0137312_1073150	Not Available	591	Open in IMG/M
3300012207\|Ga0137381_10897398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	766	Open in IMG/M
3300012207\|Ga0137381_11715089	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012208\|Ga0137376_10121836	All Organisms → cellular organisms → Bacteria	2226	Open in IMG/M
3300012209\|Ga0137379_11819237	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300012211\|Ga0137377_11290582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	660	Open in IMG/M
3300012349\|Ga0137387_10620875	Not Available	783	Open in IMG/M
3300012350\|Ga0137372_10070317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3016	Open in IMG/M
3300012353\|Ga0137367_10245347	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300012356\|Ga0137371_10157924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1778	Open in IMG/M
3300012356\|Ga0137371_11168886	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300012356\|Ga0137371_11197320	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012358\|Ga0137368_10175201	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300012360\|Ga0137375_10316354	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300012532\|Ga0137373_10282647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1326	Open in IMG/M
3300012532\|Ga0137373_10426344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1026	Open in IMG/M
3300012885\|Ga0157287_1088039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	557	Open in IMG/M
3300012914\|Ga0157297_10002354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3724	Open in IMG/M
3300012915\|Ga0157302_10574420	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300012958\|Ga0164299_10440517	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300012958\|Ga0164299_10863711	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300012971\|Ga0126369_13033680	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300012972\|Ga0134077_10248334	Not Available	736	Open in IMG/M
3300012986\|Ga0164304_10509980	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300012987\|Ga0164307_10809898	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300014166\|Ga0134079_10364140	Not Available	662	Open in IMG/M
3300014325\|Ga0163163_12940405	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300014488\|Ga0182001_10540736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300015077\|Ga0173483_10203734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	913	Open in IMG/M
3300015372\|Ga0132256_100736426	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1102	Open in IMG/M
3300015373\|Ga0132257_101432072	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300015373\|Ga0132257_103279848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300016387\|Ga0182040_11856398	Not Available	516	Open in IMG/M
3300018027\|Ga0184605_10174346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300018077\|Ga0184633_10477453	Not Available	610	Open in IMG/M
3300018431\|Ga0066655_10164139	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300018433\|Ga0066667_11191948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	662	Open in IMG/M
3300018482\|Ga0066669_10255335	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300018482\|Ga0066669_10526550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1027	Open in IMG/M
3300018482\|Ga0066669_11764020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300019362\|Ga0173479_10260454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300019362\|Ga0173479_10340794	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300019878\|Ga0193715_1074710	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300019885\|Ga0193747_1081813	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300020002\|Ga0193730_1097302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300020003\|Ga0193739_1117336	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300021073\|Ga0210378_10351591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300021080\|Ga0210382_10021220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2348	Open in IMG/M
3300021080\|Ga0210382_10285534	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300021080\|Ga0210382_10385725	All Organisms → cellular organisms → Bacteria → Terrabacteria group	620	Open in IMG/M
3300021080\|Ga0210382_10409241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300021344\|Ga0193719_10095177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1294	Open in IMG/M
3300021445\|Ga0182009_10709006	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300024310\|Ga0247681_1071222	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300025917\|Ga0207660_10018937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4598	Open in IMG/M
3300025927\|Ga0207687_10753659	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300026524\|Ga0209690_1107617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1127	Open in IMG/M
3300026532\|Ga0209160_1047312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2524	Open in IMG/M
3300026542\|Ga0209805_1219221	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300026550\|Ga0209474_10392389	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300026816\|Ga0207509_100146	All Organisms → cellular organisms → Bacteria	2129	Open in IMG/M
3300026816\|Ga0207509_105197	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300027379\|Ga0209842_1082711	Not Available	555	Open in IMG/M
3300027882\|Ga0209590_10421550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300028707\|Ga0307291_1053587	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300028711\|Ga0307293_10162566	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300028716\|Ga0307311_10143867	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300028717\|Ga0307298_10197943	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300028719\|Ga0307301_10162675	Not Available	720	Open in IMG/M
3300028720\|Ga0307317_10069663	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300028722\|Ga0307319_10006162	All Organisms → cellular organisms → Bacteria	3644	Open in IMG/M
3300028744\|Ga0307318_10139796	Not Available	829	Open in IMG/M
3300028755\|Ga0307316_10045712	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300028782\|Ga0307306_10136633	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300028784\|Ga0307282_10653140	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300028787\|Ga0307323_10251183	Not Available	637	Open in IMG/M
3300028799\|Ga0307284_10000726	All Organisms → cellular organisms → Bacteria	7741	Open in IMG/M
3300028799\|Ga0307284_10083611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300028799\|Ga0307284_10440716	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300028807\|Ga0307305_10292264	Not Available	742	Open in IMG/M
3300028810\|Ga0307294_10223450	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300028824\|Ga0307310_10553251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300028824\|Ga0307310_10663887	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300028828\|Ga0307312_10235674	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300028828\|Ga0307312_10430084	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300028828\|Ga0307312_10754004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300028828\|Ga0307312_11018890	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300028875\|Ga0307289_10175798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	881	Open in IMG/M
3300028878\|Ga0307278_10223638	Not Available	837	Open in IMG/M
3300028878\|Ga0307278_10495667	All Organisms → cellular organisms → Bacteria → Terrabacteria group	534	Open in IMG/M
3300028880\|Ga0307300_10090545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	913	Open in IMG/M
3300028881\|Ga0307277_10018428	All Organisms → cellular organisms → Bacteria	2719	Open in IMG/M
3300028881\|Ga0307277_10535227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300028885\|Ga0307304_10514126	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300031092\|Ga0308204_10136857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300031680\|Ga0318574_10692024	All Organisms → cellular organisms → Bacteria → Terrabacteria group	598	Open in IMG/M
3300031792\|Ga0318529_10376448	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300031854\|Ga0310904_10333060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	973	Open in IMG/M
3300031911\|Ga0307412_11748841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300032066\|Ga0318514_10762524	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300032067\|Ga0318524_10079398	Not Available	1605	Open in IMG/M
3300032074\|Ga0308173_10907865	Not Available	815	Open in IMG/M
3300032954\|Ga0335083_10553831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	954	Open in IMG/M
3300033551\|Ga0247830_10895902	Not Available	707	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.55%
Host-Associated	Host-Associated	11.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.53%
Plants	Host-Associated → Plants	11.45%
Aquatic	Environmental → Aquatic	5.42%
Unclassified	Environmental → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.22%
Freshwater	Environmental → Aquatic → Freshwater	3.61%
Sediment	Environmental → Aquatic → Sediment	1.81%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.60%
Unclassified	Environmental → Unclassified → Unclassified	0.60%
Roots	Host-Associated → Plants → Roots	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.02%
Loam	Environmental → Terrestrial → Soil → Loam	4.22%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.81%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.60%
Sand	Environmental → Terrestrial → Soil → Sand	0.60%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.60%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.22%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.81%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.60%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.60%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.60%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.60%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.01%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.20%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.60%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.60%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.60%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.60%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005158	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026816	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-B (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_01880880	2124908016		MTREHYDLIAIGAGSAARDGARKAHSEHGARVALVEHTRWGGS
Iowa-Corn-GraphCirc_02302680	2140918013	Soil	MSNSYDLIVLGSGSAAREGAARAAREHGASVAITE
ARcpr5oldR_0217792	3300000041	Arabidopsis Rhizosphere	MATQTYDLIVLGAGSAARDGAGKAAREHGARVAMVERT
AF_2010_repII_A001DRAFT_101117382	3300000793	Forest Soil	MGKQRYDLIVIGAGSAARYGANKAANEHGAKVALIEHERWGG
JGI10216J12902_1205634682	3300000956	Soil	MTPEQFDLIVLGAGSAARDGAKKAAAEHGARVALVERTRWG
Ga0062593_1026264942	3300004114	Soil	MADKFDLIVIGAGSAARDAAAKASREHGARVALIERTRWGG
Ga0062593_1031536921	3300004114	Soil	MRLVGERFDLVVLGGGSAARDAANMAMRDYDAGVALVERERWGGSCPN
Ga0062590_1019676891	3300004157	Soil	MADKFDLIVIGAGSAARDAAARASREYGARVALIERTRWGGS
Ga0062595_1009780161	3300004479	Soil	VLASETMPLVAERFDLVVLGGGSAARDGANMAMRDYDARVALVERVRWGGS
Ga0062595_1016593891	3300004479	Soil	MPTEIYDLVVLGAGSAARDAASRAAREHGARVALVESTRWG
Ga0062592_1015117461	3300004480	Soil	VEHYDLIVLGSGSAARNGAGKAAREHGARVALIEHRLWGGSC
Ga0062594_1004282063	3300005093	Soil	MERYDLIAIGAGSAARDAARKAATDFGAKVALVEQTRWGGS
Ga0062594_1022572042	3300005093	Soil	VSAEQFDLIVIGAGSAARDAAGKAKREHGASVAMIERERWGGSCP
Ga0066819_10221573	3300005148	Soil	VNRYDLIVLGSGSAARDAAAKAVQQCDASVALVESTRWGGSCPNV
Ga0066816_10274501	3300005158	Soil	VNRYDLIVLGSGSAARDAAAKAVQQFDASVALVESTRWGGSCPNVA
Ga0066688_105900952	3300005178	Soil	MSADHYDLIVLGSGSAARDGAGKAAREFGARVALVEHQLWGGSCPHVA
Ga0066688_109657701	3300005178	Soil	MKSEHYDLIVIGAGSAARDGAKKAAKEYGAKVALIERERWG
Ga0066684_110664331	3300005179	Soil	MSGERFDLIVLGAGSAARDGAAKAKREFGANVAMIERELWGGSCPNI
Ga0070703_102235632	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VLASETMPIVAERFDLVVLGGGSAARDGANMAMRDYDARVALVERVRWGGS
Ga0066686_103901353	3300005446	Soil	MSTDQYDLLVLGSGSAARAGANKAAQEYGARVALVEHRLWG
Ga0070699_1012924201	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSEHFDLVVIGGGSAARDAAGKAAREHEARVALVEKERWG
Ga0070684_1021484881	3300005535	Corn Rhizosphere	MGERFDLVVLGGGSAARDAANMAMRDYDARVALVERERWG
Ga0070684_1021910072	3300005535	Corn Rhizosphere	MTADHYDLIVLGAGSAARYGAGKAAREFGAHVALVEHRLW
Ga0070695_1013103241	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTADHYDLIVLGAGSAARDGAGKAAREFGAHVALVEHRLWG
Ga0070695_1018057262	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VEHYDLIVLGSGSAARDGAGKAAREHGARVALIEHRLWGG
Ga0066701_100780825	3300005552	Soil	MAEQFDLIVLGAGSAARDAAARASRDHGARVALVE
Ga0066704_104436432	3300005557	Soil	MNAERYDLIVLGSGSAARAGAGKAAQEHGARVALIEHWLWGG
Ga0066705_106743101	3300005569	Soil	MQFDLIVLGAGSAAREAATRAREYGANVALVERGLW
Ga0066702_103521532	3300005575	Soil	MKERFDLIVLGAGSAARDAAGKAKREHDANVAIVERERWGGSC
Ga0068856_1003483421	3300005614	Corn Rhizosphere	MRVVGERFDLIVIGGGSAARDAANMAMRDYDARVA
Ga0068864_1018191121	3300005618	Switchgrass Rhizosphere	VTHYDLIVLGSGSAARDAAAKAVQQCDASVALVESTRWGGSCPN
Ga0068861_1004543453	3300005719	Switchgrass Rhizosphere	VLASETMPLVAERFDLVVLGGGSAARDGANMAMRDYDAR
Ga0068858_1020529392	3300005842	Switchgrass Rhizosphere	MAEQFDLIVLGAGSAARAGAERAAREHGARVALVESTRW
Ga0066652_1015420182	3300006046	Soil	MSADRYDLLVLGSGSAARDGAGRASREFDARVALVEHGLW
Ga0075432_105411352	3300006058	Populus Rhizosphere	MERYDLIAIGAGSAARDAARKAAADFGAKVALVEQTRWGGSCP
Ga0074048_134933901	3300006581	Soil	MSERFDLIVIGGGSAARDAAGQAARMHGARVALIERER
Ga0066653_100813974	3300006791	Soil	MRSEQFDLIVLGAGSAARDGAGKAKREYGATVAMIER
Ga0079220_113013642	3300006806	Agricultural Soil	MTERFDLIVIGGGSAARDGANMALKQHGARVALIERE
Ga0075425_1014735791	3300006854	Populus Rhizosphere	VRTYDLIVLGSGSAARDGAAKAVQLCGASVALIESTRWGG
Ga0099827_112452142	3300009090	Vadose Zone Soil	VTTQQFDLIVIGAGSAARDGAKKAAAEHGANVALV
Ga0105245_106013461	3300009098	Miscanthus Rhizosphere	MPTETYDLIVLGAGSAARDGAAKAQREHGARVALVERTRWGGSCPN
Ga0075418_100420291	3300009100	Populus Rhizosphere	MGTQRYDLIVIGAGSAARHGAKLAKEHGAKVALVEHE
Ga0075418_111672951	3300009100	Populus Rhizosphere	MAERFDLIVIGGGSAARDGANMALKQHGAHVALIERGRW
Ga0066709_1027768702	3300009137	Grasslands Soil	MTAEQFDLIVLGAGSGARDGAGKAKREYGANVAIVERERGGGS
Ga0105243_103138131	3300009148	Miscanthus Rhizosphere	MRLVSERFDLVVLGGGSAARDEANMAMRDYDAHVA
Ga0105237_127750752	3300009545	Corn Rhizosphere	MKSEHYDLVVIGSGSAARDAGKKAVKDYGARVALIERERWG
Ga0126313_102948321	3300009840	Serpentine Soil	VTHYDLIVLGSGSAARDAAAKAVQHCDATVALVESTRWGGSCPNVA
Ga0126315_107567752	3300010038	Serpentine Soil	MAERFDLIVLGGGSAARDAANTAARKHGARVALVERERWG
Ga0126312_108324531	3300010041	Serpentine Soil	MSESFDLIVIGAGSAARDGAMKAQRDYGARVAMVERTRWGGSCPN
Ga0126310_109788352	3300010044	Serpentine Soil	VSDEFDLIVSGAGSGARDGAARAFRDCGARVAMIERERWGGGCP
Ga0126319_16141691	3300010147	Soil	VEHYDLIVLGSGSAARDGAGRAVREHGARVALIEHWLW
Ga0126306_110096301	3300010166	Serpentine Soil	MKNECDLIVIGAGSAAREGAARASQKYGASVAMIERTRWG
Ga0134088_106154271	3300010304	Grasslands Soil	MNAERYDLIVLGSGSAARDGAGKAAREHGARVALIEHWLW
Ga0134063_103638711	3300010335	Grasslands Soil	MSPQRYDLIVIGAGSAARDGANKAAKEHGAKVALIE
Ga0134071_107242852	3300010336	Grasslands Soil	MTRETYDLIVIGAGSAARDGGRKAMAEHGARVALVEHRLWG
Ga0126376_120642762	3300010359	Tropical Forest Soil	VQRYDLIVLGSGSAARDAAAKAFQLCDASVALVEK
Ga0126372_127908711	3300010360	Tropical Forest Soil	VPERFDLIVIGGGSAARDAAGMASRDYDASVALVEKERW
Ga0134066_100940251	3300010364	Grasslands Soil	MSTETYDLIVLGAGSAARDGAGKAAREHGARVAMVERTR
Ga0134066_101383392	3300010364	Grasslands Soil	MSPQRYDLIVIGAGSAARDGANKAAKEHGAKVALIERERWG
Ga0105239_122635951	3300010375	Corn Rhizosphere	MNAERYDLIVLGSGSAARDGAGKAAREHGARVALIEHRL
Ga0134123_133665432	3300010403	Terrestrial Soil	MNDHFDLIVIGAGSAARDGAAKASREHGARVALIERTRW
Ga0138514_1001585021	3300011003	Soil	MSADRYDLIVLGSGSAARDGAGKASREFGARVAMVEHRLWGGSC
Ga0137312_10731502	3300011400	Soil	MPADPYDLIVLGAGSAARAGAQKAAQEHGAKVALIES
Ga0137381_108973982	3300012207	Vadose Zone Soil	MSEQFDLIVIGGGSAARDAAGKATREHGARVALVEK
Ga0137381_117150891	3300012207	Vadose Zone Soil	VTTQHFDLIVIGAGSAARDGAKKAATDHGANVALVERT
Ga0137376_101218364	3300012208	Vadose Zone Soil	MSTEHYDLIVIGAGSAARDGANKAAKEHGAKVALIER
Ga0137379_118192371	3300012209	Vadose Zone Soil	MSAEQFDLIVLGAGSGARDGAGKAKREYGANVALVERER
Ga0137377_112905821	3300012211	Vadose Zone Soil	MNAEGYDLMVLGSGSAARDGASKAAREHGARIALIEHWLWGGS
Ga0137387_106208751	3300012349	Vadose Zone Soil	MNAEGYDLMVLGSGSAARDGAGKAAREHGARIALIEHWL
Ga0137372_100703175	3300012350	Vadose Zone Soil	MSSERYDLIILGAGSAARDAAAKASREFGVSVALVERERGEGSCPNVA
Ga0137367_102453474	3300012353	Vadose Zone Soil	MTDHFDLIVIGAGSAARDAAGKAAREFGASVALIER
Ga0137371_101579245	3300012356	Vadose Zone Soil	MTRTYDLIVIGAGSAGREAARKATVEYGARVALIES
Ga0137371_111688861	3300012356	Vadose Zone Soil	MNAEHFDLIVIGAGSAARDGAKKAATEYDANVALIERTRWG
Ga0137371_111973201	3300012356	Vadose Zone Soil	MEHYDLIVLGAGSAARDGAKKAATQYDAKVALVESTR
Ga0137368_101752012	3300012358	Vadose Zone Soil	MNAEHFDLIVIGAGSAARDGAKKAATEYGASVALI
Ga0137375_103163541	3300012360	Vadose Zone Soil	MNAEHFDLIVIGAGSAARDGAKKAATEYGASVALIERTRWG
Ga0137373_102826471	3300012532	Vadose Zone Soil	VSESFDLIVLGSGSAARDGAARAYDLGARVAMIERERWGGS
Ga0137373_104263441	3300012532	Vadose Zone Soil	MNAEHFDLIVIGAGSAARDGAKKAATEYGASVALIERTRWGG
Ga0157287_10880391	3300012885	Soil	MRVVNDRFDLVVLGGGSAARDAAIMAMRDYDARVALVE
Ga0157297_100023547	3300012914	Soil	MPERFDLLVLGSGSAARDAAHAAARDHGARVALIE
Ga0157302_105744201	3300012915	Soil	MKSEHYDLVVLGSGSAARDAGKKAMKDYGARVALIERERW
Ga0164299_104405171	3300012958	Soil	MRLVGERFDLVVLGGGSAARDAANMAMRDYDARVALVERERWG
Ga0164299_108637111	3300012958	Soil	MRLVGEQFDLVVLGGGSAARDAANMAMRDYDARVAL
Ga0126369_130336802	3300012971	Tropical Forest Soil	MAAVAERFDLIVIGGGSAARDAAGMASRDYDASVALVEKVRWGG
Ga0134077_102483342	3300012972	Grasslands Soil	MANDHFDLIVLGAGSAAREAAARATVDHGKSVALVERLRWGGDCP
Ga0164304_105099801	3300012986	Soil	VSAEQFDLIVIGAGSAARDAAGKAKREYGASVAMIERERW
Ga0164307_108098982	3300012987	Soil	MNNGHYDLIAIGSGSAARDGANKAAKEYGAKVALIER
Ga0134079_103641403	3300014166	Grasslands Soil	MTNDAYDLIVIGAGSAGREAARKATVEHGARVALIEGRF
Ga0163163_129404051	3300014325	Switchgrass Rhizosphere	MTENFDLIVIGAGSGARDGAARASRDHGARVALIER
Ga0182001_105407362	3300014488	Soil	MTREHYDLIVIGAGSAARDGARKAHTEHGARVALVEHT
Ga0173483_102037341	3300015077	Soil	MRVVNDRFDLVVLGGGSAARDAAMMAMRDYDARVALVERERW
Ga0132256_1007364261	3300015372	Arabidopsis Rhizosphere	MSTQTFDLVVIGAGSAAREAAARARSDHGARVALVERERWGGS
Ga0132257_1014320723	3300015373	Arabidopsis Rhizosphere	VPEHFDLIVIGGGSAARDAAGMAASDYGARVALVEK
Ga0132257_1032798481	3300015373	Arabidopsis Rhizosphere	VNYDLIVLGSGSAARDAAAMAFQRCDASVALVESTRWGGS
Ga0182040_118563981	3300016387	Soil	MPEQFDLIVLGAGSAARAAAERASREHGARVALVESTRWG
Ga0184605_101743461	3300018027	Groundwater Sediment	MSEKFDLIVLGSGSAARDGANRASEHGARVAMVER
Ga0184633_104774531	3300018077	Groundwater Sediment	VNRYDLIVLGSGSAARDAAAKAVQQCDASVALVESTRWGGSCPN
Ga0066655_101641392	3300018431	Grasslands Soil	MNTEQFDLIVLGAGSAARDGAGKAKREYGANVAMVERERWGG
Ga0066667_111919481	3300018433	Grasslands Soil	MNSESYDLVVLGSGSAARDGAGKASREHGANVALVENTRWGGSCP
Ga0066669_102553351	3300018482	Grasslands Soil	MTTEQFDLIVLGAGSAARDGAGKAKREHGASIAMIERERWGGSCPN
Ga0066669_105265501	3300018482	Grasslands Soil	MTNETYELIVLGAGSAAQDAAGKASREHGARLPAVDGTRWGG
Ga0066669_117640201	3300018482	Grasslands Soil	MVTETYDLIVLGAGSAARDGPGNAGREHGARVAMVGSTAWGGSGP
Ga0173479_102604542	3300019362	Soil	VKSYDLIVLGSGSAARDGAAKAVQLCGASVALVESTRWGGSC
Ga0173479_103407942	3300019362	Soil	MTSEHYDLIVIGSGSAARDAGTKAVKDYGARVAVI
Ga0193715_10747102	3300019878	Soil	MSNQHFDLITIGGGSAARDGARKAKDEFGARVALIESTRWGGDCPNVA
Ga0193747_10818132	3300019885	Soil	MKTEHYDLIVIGAGSAARDGAQKAAREHGAKVALI
Ga0193730_10973023	3300020002	Soil	MTADRYDLIVLGAGSAARDGAGKAAREFGAHVALVE
Ga0193739_11173361	3300020003	Soil	MNTDTFDLVVLGAGSAARDGARKAAREYDANVALV
Ga0210378_103515912	3300021073	Groundwater Sediment	MNVEHYDLIVLGSGSAARDGAGKAVREHGARVALIEHWLWG
Ga0210382_100212205	3300021080	Groundwater Sediment	MNVEHYDLIVLGSGSAARDGAGRAAREHGARVALIEHWLWGG
Ga0210382_102855342	3300021080	Groundwater Sediment	MTADHYDLIVLGSGSAARDGAGKAAREFGARVALV
Ga0210382_103857251	3300021080	Groundwater Sediment	MSNDQFDLITIGGGSAARDGARKAKDEFGARVALIE
Ga0210382_104092412	3300021080	Groundwater Sediment	MNAERYDLIVLGSGSAARAGAGKATQEHGARVTLIEHWLW
Ga0193719_100951772	3300021344	Soil	MMSERFDLIVIGGGSAARDAAGKAAREHGARVALVE
Ga0182009_107090062	3300021445	Soil	MERYDLIVIGAGSAARDAAAKAAREHGAEVAMVERARW
Ga0247681_10712222	3300024310	Soil	VPERFDLIVIGGGSAARDAAGMAAREYGARVALVEKER
Ga0207660_1001893710	3300025917	Corn Rhizosphere	MTADHYDLIVLGAGSAARDGAGKAAREFGAHVALVEHRLWGGS
Ga0207687_107536591	3300025927	Miscanthus Rhizosphere	MKSEHYDLIAIGAGSAARDGANKAAKDYGAKVALIEAEHW
Ga0209690_11076173	3300026524	Soil	MAEQFDLIVLGAGSAARDAAARASRDHGARVALVERT
Ga0209160_10473124	3300026532	Soil	MSTEQFDLIVLGAGSAARDGAGKAKREYGANVAMIERER
Ga0209805_12192211	3300026542	Soil	MTTEQFDLIVLGAGSAARDGAGKAKREYGANVAMIERERWGG
Ga0209474_103923892	3300026550	Soil	MATQFDLIVIGGGSAARDGAKKAADEYGARVAMIERTR
Ga0207509_1001461	3300026816	Soil	MTADHYDLIVLGAGSAARDGAGKAAREFGAHVALVEHRLW
Ga0207509_1051972	3300026816	Soil	MRLVGERFDLVVLGGGSAARDAANMAMRDYDARVALVERERWGGSCPNV
Ga0209842_10827111	3300027379	Groundwater Sand	MPADPYDLIVLGAGSAARAGAQTASQEHGAKVALI
Ga0209590_104215503	3300027882	Vadose Zone Soil	MNERYDLIVIGSGSAGREAARKASTDYGARVALVEST
Ga0307291_10535871	3300028707	Soil	MAENFDLIVIGAGSGARDGAARASRDHGARVALIER
Ga0307293_101625662	3300028711	Soil	MKSEHYDLIAIGAGSAARDGANKAAKDYGAKVALIEA
Ga0307311_101438671	3300028716	Soil	MSDRFDLIVIGGGSAARDGANMAAHEHGARVALIEKERWG
Ga0307298_101979431	3300028717	Soil	MTADHYDLIVLGAGSAARDGAGKAAREFGARVALVEHRLWGG
Ga0307301_101626751	3300028719	Soil	MPADRYDLIVLGAGSAARAGAQKASQEHGTKVALVESTRWGGSCPN
Ga0307317_100696634	3300028720	Soil	MRLVNDRFDLVVLGGGSAARDAANMAMRDYDARVAL
Ga0307319_100061621	3300028722	Soil	MTQQFDLIVLGSGSGARDGANKAAKEYGARVALVESTR
Ga0307318_101397962	3300028744	Soil	MSNDHFDLIVIGGGSAARDGARKAKDEFGARVALI
Ga0307316_100457124	3300028755	Soil	MKSEHYDLIAIGAGSAARDGANKAAKDYGAKVALIE
Ga0307306_101366331	3300028782	Soil	VDRFDLVVLGGGSAARDAANMAMRDYDARVALVERE
Ga0307282_106531401	3300028784	Soil	MPESFDLIVIGAGSAARDGAMTAHRQHGARVAMVERER
Ga0307323_102511832	3300028787	Soil	VNRYDLIVLGSGSAARDAAAKAVQQCDASVALVESTR
Ga0307284_1000072615	3300028799	Soil	MNAERYDLIVLGSGSAARAGAGKATQEHGARVTLIEHW
Ga0307284_100836112	3300028799	Soil	MSERFDLIVIGGGSAARDAAGKAAREHGARGALVEK
Ga0307284_104407162	3300028799	Soil	MTADHYDLIVLGAGSAARDGAGKAAREFGARVALVEHRLWG
Ga0307305_102922641	3300028807	Soil	MTDNFDLIVIGSGSAARDAAGNATREHGARVALIE
Ga0307294_102234501	3300028810	Soil	MSDRFDLIVIGGGSAARDGANMAAHEHGARVALIEKERWGGS
Ga0307310_105532512	3300028824	Soil	MSEQFDLIVLGGGSAARDAAGRAAREHDARVALVERERWGG
Ga0307310_106638872	3300028824	Soil	MKSEHYDLIAIGAGSAARDGANKAAKDYGAKVALIESER
Ga0307312_102356741	3300028828	Soil	MNAEAYDLIVLGSGSAARDGAGKAAREHGARVALIEHWLWGG
Ga0307312_104300841	3300028828	Soil	VSEQFDLIVLGGGSAARDAAGRAMREHGARVALVER
Ga0307312_107540042	3300028828	Soil	MERYDLIVLGAGSAARDGAAKAMKKYGAKVALVESARWGGS
Ga0307312_110188901	3300028828	Soil	MATETYDLIVLGAGSAARDAASKASREHGAHVAIVER
Ga0307289_101757981	3300028875	Soil	MSEQFDLIVLGGGSAARDAANVAARKHGANVALVEKER
Ga0307278_102236381	3300028878	Soil	VNRYDLIVLGSGSAARDAAAKAVQQCDASVALVEG
Ga0307278_104956671	3300028878	Soil	MNADHYDLIVLGSGSGARDGAGKAAREFGARVALVEH
Ga0307300_100905453	3300028880	Soil	MQSKGYDLIVIGAGSAARDGANRAAREHGAKVALIE
Ga0307277_100184281	3300028881	Soil	VSERFDLIVLGGGSAARDAAGKAAREHGARVALVERERWGGS
Ga0307277_105352271	3300028881	Soil	MTREHYDLIVIGAGSAARDGARKAHTEHGARVALVEHKLWG
Ga0307304_105141261	3300028885	Soil	MAEQFDLIIIGAGSAARDAAGRATRDYGMRVALIERTRWG
Ga0308204_101368571	3300031092	Soil	MERYDLIVLGAGSAARDGAKMAAALYDAKAALVESTRW
Ga0318574_106920242	3300031680	Soil	MPEQFDLIVLGAGSAARAAAERASREHGARVALVE
Ga0318529_103764481	3300031792	Soil	MAAASFDLIVLGAGSAAREAAAHAVRDHGARVALVERERWG
Ga0310904_103330601	3300031854	Soil	MERYDLIAIGAGSAARDAARKASTDFGAKVALVERTR
Ga0307412_117488411	3300031911	Rhizosphere	MKAETFDLVVLGGGSAARDGARKAAEEHGANVALV
Ga0318514_107625242	3300032066	Soil	MADTFDLIVIGAGSAARNAAEKASREHSARVALIE
Ga0318524_100793984	3300032067	Soil	MPEQFDLIVLGAGSAARAAAERASREHGARVALVESTRW
Ga0308173_109078653	3300032074	Soil	MATDTYDLIVLGAGSAARDGAGKAAREPGARGAIVERTR
Ga0335083_105538311	3300032954	Soil	MSERFDLIVLGGGSAARDAAGRAMRKHGARVALVEKERWGG
Ga0247830_108959022	3300033551	Soil	MSHHFDLIVLGSGSGARDGANKAHSEHGASVAIVESTRWGGSC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038221

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences