NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F038299

Metagenome / Metatranscriptome Family F038299

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F038299
Family Type Metagenome / Metatranscriptome
Number of Sequences 166
Average Sequence Length 40 residues
Representative Sequence MASTKVPIELSSTPGIVDNSNATAITIDSSENVGIGT
Number of Associated Samples 141
Number of Associated Scaffolds 166

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 99.38 %
% of genes near scaffold ends (potentially truncated) 95.78 %
% of genes from short scaffolds (< 2000 bps) 84.34 %
Associated GOLD sequencing projects 129
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (41.566 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(22.289 % of family members)
Environment Ontology (ENVO) Unclassified
(71.687 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(86.145 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 10.77%    β-sheet: 9.23%    Coil/Unstructured: 80.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 166 Family Scaffolds
PF13884Peptidase_S74 47.59
PF00386C1q 4.82
PF11962Peptidase_G2 0.60
PF02195ParBc 0.60
PF11651P22_CoatProtein 0.60



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.61 %
UnclassifiedrootN/A41.57 %
unclassified Hyphomonasno rankunclassified Hyphomonas4.82 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10033228All Organisms → Viruses → Predicted Viral2803Open in IMG/M
3300000117|DelMOWin2010_c10156516All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium746Open in IMG/M
3300001961|GOS2240_1047492All Organisms → Viruses → environmental samples → uncultured Mediterranean phage985Open in IMG/M
3300001962|GOS2239_1025564All Organisms → cellular organisms → Bacteria1823Open in IMG/M
3300001962|GOS2239_1044606All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium589Open in IMG/M
3300001963|GOS2229_1008013All Organisms → cellular organisms → Bacteria1478Open in IMG/M
3300002242|KVWGV2_10989122Not Available511Open in IMG/M
3300004461|Ga0066223_1148117Not Available556Open in IMG/M
3300005611|Ga0074647_1011920All Organisms → Viruses → Predicted Viral1589Open in IMG/M
3300005837|Ga0078893_11936831All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.684Open in IMG/M
3300005941|Ga0070743_10233111Not Available600Open in IMG/M
3300006193|Ga0075445_10107400All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED651034Open in IMG/M
3300006352|Ga0075448_10040803Not Available1489Open in IMG/M
3300006419|Ga0075496_1011614Not Available502Open in IMG/M
3300006752|Ga0098048_1129023All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aequorivita → unclassified Aequorivita → Aequorivita sp.758Open in IMG/M
3300006802|Ga0070749_10783564Not Available506Open in IMG/M
3300006810|Ga0070754_10241498All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium828Open in IMG/M
3300006869|Ga0075477_10189165Not Available847Open in IMG/M
3300006919|Ga0070746_10355007Not Available664Open in IMG/M
3300006921|Ga0098060_1051421All Organisms → Viruses1217Open in IMG/M
3300006947|Ga0075444_10191810All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED65831Open in IMG/M
3300007344|Ga0070745_1142886Not Available911Open in IMG/M
3300007344|Ga0070745_1155239Not Available865Open in IMG/M
3300007540|Ga0099847_1112781All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium822Open in IMG/M
3300007542|Ga0099846_1251598Not Available613Open in IMG/M
3300007954|Ga0105739_1140250Not Available570Open in IMG/M
3300007960|Ga0099850_1012715All Organisms → Viruses → Predicted Viral3791Open in IMG/M
3300007963|Ga0110931_1148339All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.704Open in IMG/M
3300008012|Ga0075480_10044401All Organisms → Viruses → Predicted Viral2632Open in IMG/M
3300008012|Ga0075480_10160190Not Available1214Open in IMG/M
3300009440|Ga0115561_1259623All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage647Open in IMG/M
3300009606|Ga0115102_10387025All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-7505Open in IMG/M
3300009608|Ga0115100_10075308Not Available550Open in IMG/M
3300009790|Ga0115012_11265016Not Available623Open in IMG/M
3300010148|Ga0098043_1135038All Organisms → Viruses705Open in IMG/M
3300011258|Ga0151677_1027244Not Available606Open in IMG/M
3300012524|Ga0129331_1075132Not Available535Open in IMG/M
3300012919|Ga0160422_10851801Not Available586Open in IMG/M
3300012920|Ga0160423_10273979All Organisms → Viruses → Predicted Viral1165Open in IMG/M
3300012952|Ga0163180_10148252All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1555Open in IMG/M
3300012969|Ga0129332_1135574All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium718Open in IMG/M
3300017708|Ga0181369_1094972All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium623Open in IMG/M
3300017709|Ga0181387_1044326Not Available882Open in IMG/M
3300017710|Ga0181403_1002512All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium SB24174Open in IMG/M
3300017713|Ga0181391_1151004Not Available514Open in IMG/M
3300017717|Ga0181404_1031607Not Available1358Open in IMG/M
3300017719|Ga0181390_1099921Not Available778Open in IMG/M
3300017720|Ga0181383_1024514unclassified Hyphomonas → Hyphomonas sp.1622Open in IMG/M
3300017724|Ga0181388_1037891Not Available1178Open in IMG/M
3300017727|Ga0181401_1004849All Organisms → Viruses → Predicted Viral4679Open in IMG/M
3300017729|Ga0181396_1123550Not Available533Open in IMG/M
3300017730|Ga0181417_1093752All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium726Open in IMG/M
3300017734|Ga0187222_1150797Not Available517Open in IMG/M
3300017737|Ga0187218_1096978All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium709Open in IMG/M
3300017740|Ga0181418_1014178All Organisms → Viruses → Predicted Viral2133Open in IMG/M
3300017741|Ga0181421_1037900Not Available1295Open in IMG/M
3300017744|Ga0181397_1023872All Organisms → Viruses → Predicted Viral1781Open in IMG/M
3300017744|Ga0181397_1038253Not Available1357Open in IMG/M
3300017745|Ga0181427_1001159Not Available6610Open in IMG/M
3300017751|Ga0187219_1156189Not Available655Open in IMG/M
3300017753|Ga0181407_1077159All Organisms → Viruses → environmental samples → uncultured Mediterranean phage852Open in IMG/M
3300017755|Ga0181411_1003546All Organisms → cellular organisms → Bacteria5475Open in IMG/M
3300017756|Ga0181382_1150950All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.605Open in IMG/M
3300017758|Ga0181409_1088740All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium928Open in IMG/M
3300017763|Ga0181410_1012837All Organisms → Viruses → Predicted Viral2879Open in IMG/M
3300017764|Ga0181385_1175661Not Available647Open in IMG/M
3300017775|Ga0181432_1214482Not Available604Open in IMG/M
3300017782|Ga0181380_1085151unclassified Hyphomonas → Hyphomonas sp.1104Open in IMG/M
3300017782|Ga0181380_1172106All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium732Open in IMG/M
3300017783|Ga0181379_1059590All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aequorivita → unclassified Aequorivita → Aequorivita sp.1446Open in IMG/M
3300017783|Ga0181379_1114153Not Available981Open in IMG/M
3300017786|Ga0181424_10031452All Organisms → Viruses → Predicted Viral2304Open in IMG/M
3300017786|Ga0181424_10037258All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium2108Open in IMG/M
3300017786|Ga0181424_10453160Not Available517Open in IMG/M
3300017950|Ga0181607_10582442All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage590Open in IMG/M
3300017985|Ga0181576_10056644Not Available2665Open in IMG/M
3300018420|Ga0181563_10391494Not Available795Open in IMG/M
3300018424|Ga0181591_10592912unclassified Hyphomonas → Hyphomonas sp.794Open in IMG/M
3300019459|Ga0181562_10338993Not Available738Open in IMG/M
3300019459|Ga0181562_10570158Not Available531Open in IMG/M
3300019751|Ga0194029_1096255Not Available518Open in IMG/M
3300020173|Ga0181602_10236413All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300020174|Ga0181603_10377135All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium525Open in IMG/M
3300020374|Ga0211477_10085038All Organisms → Viruses → Predicted Viral1184Open in IMG/M
3300020393|Ga0211618_10144909All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300020410|Ga0211699_10270211Not Available659Open in IMG/M
3300020430|Ga0211622_10250311Not Available759Open in IMG/M
3300020461|Ga0211535_10163626Not Available969Open in IMG/M
3300021085|Ga0206677_10226547unclassified Hyphomonas → Hyphomonas sp.785Open in IMG/M
3300021185|Ga0206682_10277515Not Available736Open in IMG/M
3300021373|Ga0213865_10082494All Organisms → Viruses → Predicted Viral1737Open in IMG/M
3300021373|Ga0213865_10235431All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium885Open in IMG/M
3300021373|Ga0213865_10250293All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.849Open in IMG/M
3300021378|Ga0213861_10210143All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1054Open in IMG/M
3300021389|Ga0213868_10431522Not Available722Open in IMG/M
3300021425|Ga0213866_10094755All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)1633Open in IMG/M
3300021425|Ga0213866_10359197All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium718Open in IMG/M
3300021792|Ga0226836_10840630Not Available518Open in IMG/M
3300021957|Ga0222717_10117310All Organisms → Viruses → Predicted Viral1650Open in IMG/M
3300021959|Ga0222716_10075545All Organisms → Viruses → Predicted Viral2327Open in IMG/M
3300021959|Ga0222716_10112420Not Available1826Open in IMG/M
3300021964|Ga0222719_10179480All Organisms → Viruses → Predicted Viral1467Open in IMG/M
3300022066|Ga0224902_100679All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1610Open in IMG/M
3300022167|Ga0212020_1081127All Organisms → Viruses544Open in IMG/M
3300022169|Ga0196903_1010101All Organisms → Viruses → Predicted Viral1176Open in IMG/M
3300022178|Ga0196887_1058492unclassified Hyphomonas → Hyphomonas sp.959Open in IMG/M
3300022178|Ga0196887_1096615All Organisms → Viruses666Open in IMG/M
3300022187|Ga0196899_1173811All Organisms → Viruses → environmental samples → uncultured virus585Open in IMG/M
3300022187|Ga0196899_1181950Not Available566Open in IMG/M
3300022200|Ga0196901_1052009All Organisms → Viruses → Predicted Viral1525Open in IMG/M
3300022900|Ga0255771_1100957All Organisms → cellular organisms → Bacteria1337Open in IMG/M
(restricted) 3300023109|Ga0233432_10154640All Organisms → Viruses1200Open in IMG/M
3300023180|Ga0255768_10122697All Organisms → Viruses → Predicted Viral1695Open in IMG/M
3300023180|Ga0255768_10340651Not Available822Open in IMG/M
(restricted) 3300024264|Ga0233444_10112173All Organisms → Viruses → Predicted Viral1398Open in IMG/M
3300025048|Ga0207905_1044486Not Available694Open in IMG/M
3300025083|Ga0208791_1033889unclassified Hyphomonas → Hyphomonas sp.953Open in IMG/M
3300025108|Ga0208793_1049439All Organisms → Viruses → environmental samples → uncultured Mediterranean phage1302Open in IMG/M
3300025132|Ga0209232_1026570All Organisms → Viruses → Predicted Viral2239Open in IMG/M
3300025137|Ga0209336_10089936Not Available883Open in IMG/M
3300025138|Ga0209634_1022719All Organisms → Viruses → Predicted Viral3460Open in IMG/M
3300025138|Ga0209634_1119657All Organisms → Viruses → Predicted Viral1126Open in IMG/M
3300025570|Ga0208660_1047945All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinomonas → Marinomonas polaris → Marinomonas polaris DSM 165791078Open in IMG/M
3300025621|Ga0209504_1008358All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5068Open in IMG/M
3300025646|Ga0208161_1066671All Organisms → Viruses → Predicted Viral1085Open in IMG/M
3300025646|Ga0208161_1073252Not Available1014Open in IMG/M
3300025647|Ga0208160_1028670All Organisms → Viruses → Predicted Viral1701Open in IMG/M
3300025652|Ga0208134_1059116All Organisms → Viruses1180Open in IMG/M
3300025655|Ga0208795_1042280All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1382Open in IMG/M
3300025771|Ga0208427_1211749Not Available611Open in IMG/M
3300025810|Ga0208543_1096104Not Available708Open in IMG/M
3300025815|Ga0208785_1090837unclassified Hyphomonas → Hyphomonas sp.768Open in IMG/M
3300025840|Ga0208917_1182100All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.711Open in IMG/M
3300025853|Ga0208645_1024621All Organisms → Viruses → Predicted Viral3229Open in IMG/M
3300025853|Ga0208645_1135210Not Available961Open in IMG/M
3300025860|Ga0209119_1188663All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage811Open in IMG/M
3300025887|Ga0208544_10391283Not Available520Open in IMG/M
3300025889|Ga0208644_1048590All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium2371Open in IMG/M
3300026187|Ga0209929_1028348All Organisms → Viruses → Predicted Viral1700Open in IMG/M
3300027791|Ga0209830_10181454All Organisms → cellular organisms → Bacteria → Proteobacteria991Open in IMG/M
3300027810|Ga0209302_10338697Not Available689Open in IMG/M
3300027820|Ga0209578_10535620All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes523Open in IMG/M
3300027833|Ga0209092_10053487All Organisms → Viruses → Predicted Viral2491Open in IMG/M
3300027833|Ga0209092_10063250Not Available2259Open in IMG/M
3300028125|Ga0256368_1022716All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1111Open in IMG/M
3300029792|Ga0183826_1022717Not Available1007Open in IMG/M
3300031519|Ga0307488_10319255All Organisms → Viruses992Open in IMG/M
3300031622|Ga0302126_10126809Not Available968Open in IMG/M
3300031659|Ga0307986_10378304Not Available571Open in IMG/M
3300031687|Ga0308008_1077761Not Available778Open in IMG/M
3300031695|Ga0308016_10366724Not Available516Open in IMG/M
3300031706|Ga0307997_10265092All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium616Open in IMG/M
3300031775|Ga0315326_10975020Not Available519Open in IMG/M
3300031851|Ga0315320_10246140All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium1297Open in IMG/M
3300031851|Ga0315320_10415486All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium928Open in IMG/M
3300032047|Ga0315330_10255749Not Available1116Open in IMG/M
3300032088|Ga0315321_10301913All Organisms → Viruses → Predicted Viral1020Open in IMG/M
3300032277|Ga0316202_10062072All Organisms → Viruses1742Open in IMG/M
3300032277|Ga0316202_10130939All Organisms → Viruses → Predicted Viral1163Open in IMG/M
3300034374|Ga0348335_154826unclassified Hyphomonas → Hyphomonas sp.621Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous22.29%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater21.08%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine12.05%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh7.83%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.63%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater4.22%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater4.22%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.41%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.41%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.81%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.20%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat1.20%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.20%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.20%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.60%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.60%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.60%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.60%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment0.60%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.60%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.60%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.60%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.60%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.60%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.60%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.60%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.60%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.60%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.60%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.60%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment0.60%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001961Marine microbial communities from Dirty Rock, Cocos Island, Costa Rica - GS025EnvironmentalOpen in IMG/M
3300001962Marine microbial communities from Cocos Island, Costa Rica - GS023EnvironmentalOpen in IMG/M
3300001963Marine microbial communities from Nags Head, North Carolina, USA - GS013EnvironmentalOpen in IMG/M
3300002242Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey matEnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300005611Saline surface water microbial communities from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006193Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNAEnvironmentalOpen in IMG/M
3300006352Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNAEnvironmentalOpen in IMG/M
3300006419Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007954Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_0.2umEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009606Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009608Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_2Apr14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300011258Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeateEnvironmentalOpen in IMG/M
3300012524Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300012969Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017734Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)EnvironmentalOpen in IMG/M
3300017737Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019751Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MGEnvironmentalOpen in IMG/M
3300020173Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020174Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020374Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)EnvironmentalOpen in IMG/M
3300020393Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)EnvironmentalOpen in IMG/M
3300020410Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)EnvironmentalOpen in IMG/M
3300020430Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)EnvironmentalOpen in IMG/M
3300020461Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556127-ERR599150)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300021792Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Illium_FS922 150_kmerEnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022066Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28 (v2)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022900Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023180Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300025048Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)EnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025570Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025621Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025815Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025860Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)EnvironmentalOpen in IMG/M
3300025887Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026187Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027810Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027820Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300029792Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031622Marine microbial communities from Western Arctic Ocean, Canada - CB4_20mEnvironmentalOpen in IMG/M
3300031659Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82EnvironmentalOpen in IMG/M
3300031687Marine microbial communities from water near the shore, Antarctic Ocean - #125EnvironmentalOpen in IMG/M
3300031695Marine microbial communities from water near the shore, Antarctic Ocean - #233EnvironmentalOpen in IMG/M
3300031706Marine microbial communities from David Island wharf, Antarctic Ocean - #36EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300032047Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915EnvironmentalOpen in IMG/M
3300032088Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1003322853300000101MarineMAITKVTRTLLSTGIDDQSNATAITIDSSENVGIGNTVASSMD
DelMOWin2010_1015651613300000117MarineMALTQVSRGLLSTSIVDNGNATAITIDSSENVGIGRAPRVML
GOS2240_104749213300001961MarineMTTKVPIELSSTPSIVDGGNATAITIDSSENVGIGSSTINAKL
GOS2239_102556443300001962MarineMTTKVPIELSSTPSIVDGGNATAITIDSSENCWNRVID
GOS2239_104460613300001962MarineMTTKIPAELSSTPGIADSSNATAITISADENLGVGTTTITNNTLG
GOS2229_100801343300001963MarineMALTQVPIELSSTPGIVDNSNATAITIDSSENVGIGSSPAYKLDV
KVWGV2_1098912213300002242Marine SedimentMTTKIPVELSSTPGIVDGSNATAITIDSSENVGIG
Ga0066223_114811713300004461MarineMANTKIPVELSSTPSIVDGGNATAITIDSSENVLVGQTLASSNA
Ga0074647_101192013300005611Saline Water And SedimentMALTQVPIELSSTPGIVDNSNATAITIDSSENVGI
Ga0078893_1193683113300005837Marine Surface WaterMANTKIPVELSSTPGIVDNSNATAITIDSSENVGIGTSSIASGGANT
Ga0070743_1023311113300005941EstuarineMALIKVPKEMGSTPGIVDNSNATAITIDSSENVGI
Ga0075445_1010740023300006193MarineMALTKTPIELSSTPGIVDNSNATAITIDSSENVTL
Ga0075448_1004080313300006352MarineMALTKVSRGLLSTGIVDNSNATAITIDSSENVTFAGGVTTTGLAIN
Ga0075496_101161413300006419AqueousMALTKVSRGLLSTGIVDNSTTTAITIDSSENVGIG
Ga0098048_112902333300006752MarineMANTKIPAELSSTPGIVDNSNATTITINSSENVGINDIN
Ga0070749_1078356423300006802AqueousMAATKVPIELSSTPGIVDNSNATAITIDSSENVGIGTTPSAYNS
Ga0070754_1024149813300006810AqueousMALTKIPSELSSTTGIVDNSTATAITIDSNENVGIGTSSP
Ga0075477_1018916523300006869AqueousMALTEIPIELSSTPGIVDNSTSTAIIIDASQNVGIGVSPSTKLHLGGAAPLDS
Ga0070746_1035500733300006919AqueousMANTKIPVELSSTPSIVDNGDATAITIDSSERVMIGTTDAGYPDFGDSL
Ga0098060_105142113300006921MarineMTTKVPVELSSTPGIVDGSNATAITIDSSENVGIGVTPDS
Ga0075444_1019181013300006947MarineMALTKTPIELSSTPGIVDNSNATAITIDSSENVTLT
Ga0070745_114288613300007344AqueousMASTKVPIELSSTPGIVDNSNATAITIDSNENVALTGG
Ga0070745_115523933300007344AqueousMALTQVPIELSSTPGIVDNSNATAITIDSSENVGIGTNSPNSYSGFT
Ga0070745_119688323300007344AqueousMALTEVPIELSSTPGIIDNSTGTAITIDSSNNTNFADNAKAIF
Ga0099847_111278113300007540AqueousMALTKVSRGLLSTSIVDNGNATAITIDSSENVGIGTSSPVSFGAN
Ga0099846_125159823300007542AqueousMASTKVPIELSSTPGIVDNSNATAITIDSSENVGIGTS
Ga0105739_114025023300007954Estuary WaterMALTKVSRGLLSTGLVDNSNATAITLNADESATFAGAISVTG
Ga0099850_101271573300007960AqueousMAITKVTRTLLSTGIDDQSNATAITIDSSEQVGIGCSPAKPLDVQSG
Ga0110931_114833913300007963MarineMTTKVPIELSSTPGIVDGSNATAITIDSSENVGIGVTPDSEPR
Ga0075480_1004440143300008012AqueousMAITKVTRTLLSTGIVDNSNATAITIDSSERVLIGTDSGD
Ga0075480_1016019023300008012AqueousMANTKIPVELSSTPGIVDNSNATAITIDSSENVGIGTS
Ga0115561_125962323300009440Pelagic MarineMALTKVSRGLISTSIVDNGNATAITIDSSENVSFTGAATFSG
Ga0115558_118992913300009449Pelagic MarineMALTEIPKELSSTPSIVDNSTGTAITIDSSNNTNFADNAKAIF
Ga0115102_1038702523300009606MarineMALTKVSRGLLSTSIEDNGTSTAITIDSSENVGIGAASPS
Ga0115100_1007530813300009608MarineMALTEIPIELSSTPSIVDGGNATAITIDSSENVTFAGN
Ga0115012_1126501633300009790MarineMALTKVDKSVSSTPGIVDNSDATAITIDSSENVLIGVTSGSDPLVVS
Ga0098043_113503813300010148MarineMTTKVPVELSSTPGIVDGSNATAITIDSSENVGIG
Ga0151677_102724423300011258MarineMALTKTPIELSSTPGIVDNSNTTAITIDASENVGIGVTNP
Ga0129331_107513233300012524AqueousMALTEIPIELSSTPGIVDNSNATAITIDSSENVGIGT
Ga0160422_1085180133300012919SeawaterMANTKIPVELSSTPGIVDNSDANAITIDSSENVAIGSSTADAK
Ga0160423_1027397913300012920Surface SeawaterMVTKVDKSVSSTPGIVDNSNATAITITSDENVLIGSSTSIA
Ga0163180_1014825213300012952SeawaterMALTTIPSELSSVSGIADSSDATAITIDSSENIKINQKLSIGT
Ga0129332_113557423300012969AqueousMALTKVSRGLLSTGIVDNSTTTAITIDSSENVGIGTSNPPNC
Ga0181369_109497213300017708MarineMALTKVSRGLLSTSIVDNGNATAITIDSSENVGIGTSAVMQD
Ga0181387_104432633300017709SeawaterMAITKVTRNMLNTGIVDNSNATAITIDSSENVGIG
Ga0181403_100251213300017710SeawaterMALTKVSRGLLSTSIVDNGNATAITIDSSENVGIGTSSPSRTFHSL
Ga0181391_115100413300017713SeawaterMALTKVSRGLLSTGIVDNSNATAITLNADESSTFAGP
Ga0181404_103160733300017717SeawaterMAITKVTRQLLSTGINDNSNATAITIDSSEDVTLA
Ga0181390_109992123300017719SeawaterMANTKIPAELSSTPGIIDNSNATAITIDSSENVGIGTGSPS
Ga0181383_102451443300017720SeawaterMTTKTPIELSSTPSVVDNGNATAITIDSSERVGILQSSPTS
Ga0181388_103789113300017724SeawaterMTTKIPVELSSTPGIVDGSNATAITINSSEQVGIGTTSPSYK
Ga0181401_100484983300017727SeawaterMTTKIPVELSSTPGIVDGSNATAITIDSSERVGIG
Ga0181396_112355023300017729SeawaterMAITKVTRNMLNTGIVDNSNATAITIYSSENVGIGTASPSQTLHT
Ga0181417_109375213300017730SeawaterMSVTQVPIELSSTPGIVDNSNATAITIDSSENVGIGTSAT
Ga0187222_115079723300017734SeawaterMTTKVPIELSSTPSIVDGGNATAITIDSSERVGIGTA
Ga0187218_109697823300017737SeawaterMANTKIPAELSSTPGIIDNSNATAITIDSSENVGIG
Ga0181428_103110013300017738SeawaterMTTKTPIELSSTPSVVDNGNATAITIDSSENVTVNNGTLTS
Ga0181428_105096613300017738SeawaterMTTTKVPIELSSTPGIVDGSNATAITIDSSERVGINTSSPNAVLTTDPE
Ga0181418_101417813300017740SeawaterMTTKIPVELSSTPGIVDGSNATAITIDSSERVGVGN
Ga0181421_103790023300017741SeawaterMTTKIPVELSSTPGIVDGSNATAITIDSSEQVGIGTASPAQTL
Ga0181397_102387223300017744SeawaterMALTKVSRGLLSTSIEDNGNATAITIDSSENVGIGTSSPN
Ga0181397_103825313300017744SeawaterMTTKIPVELSSTPGIVDGSNATAITIDSSERVGIGT
Ga0181427_1001159103300017745SeawaterMANTKIPVELSSTPSIVDNGDATAITIDSSERVGILQ
Ga0187219_115618913300017751SeawaterMTTKIPVELSSTPGIVDGSNATAITIDSSENVGIGAVPKTTEAGWTN
Ga0181407_107715913300017753SeawaterMALTTTPIELSSTPSIVDGGNATAITIDSSEFVEFANGASFGV
Ga0181411_100354673300017755SeawaterMALTEIPIELSSTPSIVDGGNATAITIDSSENIGLGVTNPADYYAE
Ga0181382_115095023300017756SeawaterMALTKTPIELSSTPSIVDGGNATAITIDSSEFVEFANGA
Ga0181409_108874033300017758SeawaterMALTDVPVELSSTPSIVDGGNAAAITIDSSENVGIGLSS
Ga0181410_101283713300017763SeawaterMALTTTPIELSSTPSIVDGGNATAITIDSSENVSLANNLAFIAADGVS
Ga0181385_117566113300017764SeawaterMAITKVTRTLLSTGIVDNSNATAITIDSSENVGIGVTP
Ga0181432_121448233300017775SeawaterMALTKIPAYLSSTPSIVDGGNATALTIDSSENITLTGTL
Ga0181380_108515113300017782SeawaterMAITKVTRTLLSTGIVDNSNATAITIDSSENVGIGV
Ga0181380_117210613300017782SeawaterMALTKVSRGLLSTSIVDNGNATAITIDSSENVGIGVTSPNAIIE
Ga0181379_105959033300017783SeawaterMALTDVPVELSSTPSIVDGGNAAAITIDSSENVGIGTI
Ga0181379_111415323300017783SeawaterMALTKIPSELSSTTGIVDNSNATAITIDSSENVVIGHTSALALECLGKK
Ga0181424_1003145253300017786SeawaterMALTEIPSELSSTPSIVDNGNATAITIDSSERVLIG
Ga0181424_1003725813300017786SeawaterMALTQVPIELSSTPGIVDNSNATAITIDSSENVGIGS
Ga0181424_1045316023300017786SeawaterMALTKVPNELSSTPSIVDGGNATAITIDSSENVLIGQT
Ga0181607_1058244223300017950Salt MarshMALTQVPIELSSTPGIVDNSNATAITIDSSENVGIGESNPAEKL
Ga0181607_1067224213300017950Salt MarshMALTEVPIELSSTPGIIDNSTGTAITIDSSNNTNFADNTKAIFG
Ga0181590_1099514723300017967Salt MarshMALTEVPIELSSTPGIVDNSTGTAITIDSSNNTNFADNVK
Ga0181576_1005664423300017985Salt MarshMALTEVPIELSSTPGIVDNSTGTAITIDTSGNVGIGES
Ga0181563_1039149423300018420Salt MarshMALTKVSKGLISTSIVDNGNATAITIDSAGSATFSN
Ga0181591_1059291233300018424Salt MarshMPRTRIPKELSSTTGIVDNSTATAITIDSSQNVGIGTSSS
Ga0181562_1033899313300019459Salt MarshMALTKVSRGLISTSIVDNGNATAITIDSSENVSFTGA
Ga0181562_1057015823300019459Salt MarshMALTKTPIELSSTPSIVDNSDGAAITIDINENVTVSQ
Ga0194029_109625533300019751FreshwaterMASTKVPIELSSTPGIVDNSNATAITIDSSENVGIGTSSPNAY
Ga0181602_1023641313300020173Salt MarshMALTKVSRGLLSTSIVDNGNATAITIDSSENVGIGT
Ga0181603_1037713513300020174Salt MarshMALTQVPIELSSTPGIVDNSNATAITIDSSENVGIGSTPI
Ga0211477_1008503813300020374MarineMAITKVPVELSSTTGIVDNSNATAITIDSSENVLIGTTNTTTV
Ga0211618_1014490913300020393MarineMATTKIPVELSSTPGIVDNSNATAITIDSSENVGIGTT
Ga0211699_1027021113300020410MarineMTTKVPVELSSTPGIADSSNATAVTITSDEDFLVRQTS
Ga0211622_1025031113300020430MarineMTTKIPVELSSTPGIVDGSNATAITIDSSENVGIGTT
Ga0211535_1016362613300020461MarineMANTKVPVELSSTPGIVDNSNATAITIDSSENVGIGTSSPSRQLT
Ga0206677_1022654723300021085SeawaterMAITKVTRTLLSTGIVDNSNATAITIDSSEQVGIGLTNQAN
Ga0206682_1027751533300021185SeawaterMALTKVSRGLLSTGIVDNSNATAITLNADESATFSGTVGV
Ga0213865_1008249433300021373SeawaterMALTQVPIELSSTPGIVDNSNATAITIDSSENVGIGRAPR
Ga0213865_1023543113300021373SeawaterMALTQVSRGLLSTSIVDNGNAMAITIDSSENVGIGT
Ga0213865_1025029313300021373SeawaterMANTKIPVELSSTPGIVDNSNATAITIDSSENVGIGTA
Ga0213861_1021014313300021378SeawaterMALTQVPIELSSTPGIVDNSNATAITIDSSENVGIGTS
Ga0213868_1043152213300021389SeawaterMALTKVSRGLISTSIVDNGNATAITIDSSENVTFAGD
Ga0213866_1009475533300021425SeawaterMANTKIPVELSSTPGIVDNSNATAITIDSSENVGIGT
Ga0213866_1035919723300021425SeawaterMANTKIPVELSSTPGIVDNSNATAITIDSSENVGIG
Ga0226836_1084063023300021792Hydrothermal Vent FluidsMTTKIPVELSSTPGISDSSDATAITITSAEKVGIGT
Ga0222717_1011731023300021957Estuarine WaterMALTKVSRGLLSTSIVDNGNATAITIDSSDNVTFS
Ga0222716_1007554523300021959Estuarine WaterMANTKIPVELSSTPGIVDNSNATAITIDSSENVGIGGS
Ga0222716_1011242013300021959Estuarine WaterMATQKIDRNMLNTGIVDNSNATAITIDSSEKVGIGTGS
Ga0222719_1017948013300021964Estuarine WaterMANTTIPIELSSTPGIVDNSNATAITIDSSENVGI
Ga0224902_10067923300022066SeawaterMTTKIPVELSSTPSIVDNGDATAITIDSDEKVGIGTTSP
Ga0212020_108112713300022167AqueousMASTKVPIELSSTPGIVDNSNATAITIDSSENVGIG
Ga0196903_101010113300022169AqueousMALTKVSRGLLSTSIVDNGNATAITIDSSENVGIG
Ga0196887_105849223300022178AqueousMAITKVTRTLLSTGIDDQSNATAITIDSSENVGINN
Ga0196887_109661523300022178AqueousMTTKIPVELSSTPGIVDGSNATAITIDSSERVGIN
Ga0196899_117381113300022187AqueousMASTKVPIELSSTPGIVDNSNATAITIDSSENVALTGGL
Ga0196899_118195013300022187AqueousMALTKVSRGLLSTSIVDNGNATAITIDANENVGIGTNSPNSTAGFTTLTLNNAT
Ga0196901_105200913300022200AqueousMASTKVPIELSSTPGIVDNSNATAITIDSNENVALTGGLTLA
Ga0255771_110095723300022900Salt MarshMALTKVSRGLISTSIVDNGNATAITIDSSENVSFTGAGTFS
(restricted) Ga0233432_1015464013300023109SeawaterMALTKVSRELLNTSIVDNGNATAITIDSSENVGIG
Ga0255768_1012269713300023180Salt MarshMASTKVPIELSSTPGIVDNSNATAITIDSSENVGIGT
Ga0255768_1034065113300023180Salt MarshMAKTTVPQELSSTPNITDNGTATAITIDSSQNVGIGTSS
(restricted) Ga0233444_1011217313300024264SeawaterMALTKVSRELLNTSIVDNGNATAITIDSSENVGIGT
Ga0207905_104448623300025048MarineMALTEIPIELSSTPSIVDGGNATAITIDSSENVTLAGN
Ga0208791_103388913300025083MarineMAITKVTRTLLSTGIVDNSNATAITIDSSENVGIG
Ga0208793_104943913300025108MarineMTTKVPVELSSTPGIVDGSNATAITIDSSENVGIGIT
Ga0209232_102657013300025132MarineMALTQVPIELSSTPGIVDNSNATAITIDSSENVLVGKTSL
Ga0209336_1008993633300025137MarineMATTKIPQELSSTPGIVDNSNATAVTIDSSENVMVGTTNTNPVG
Ga0209634_102271933300025138MarineMANTKIPKELSSTPSIVDNGNATAITIDTSENVTLASGLDVN
Ga0209634_111965713300025138MarineMATTKIPQELSSTPGIVDNSNATAVTIDSSENVMVG
Ga0208660_104794533300025570AqueousMALTKTPIELSSTQGIVDNSNATAITIDSSENVGIG
Ga0209504_100835843300025621Pelagic MarineMALTKVSRGLISTSIVDNGNATAITIDSSENVSFTG
Ga0208161_106667123300025646AqueousMASTKVPIELSSTPGIVDNSNATAITIDSSENVGIGTSN
Ga0208161_107325213300025646AqueousMASTKVPIELSSTPGIVDNSNATAITIDSSENVGIGTSNP
Ga0208160_102867033300025647AqueousMASTKVPIELSSTPGIVDNSNATAITIDSSENVGIGVTPVSAEGSFLQF
Ga0208134_105911613300025652AqueousMALTKTPIELSSTPSIVDGGNATAITIDSSENVGIG
Ga0208795_104228013300025655AqueousMASTKVPIELSSTPGIVDNSNATAITIDSNENVALTGGLT
Ga0208427_121174913300025771AqueousMALTEIPIELSSTPGIVDNSTSTAIIIDASQNVGIGVSPSTKLHLGGA
Ga0208543_109610423300025810AqueousMALTEIPIELSSTPGIVDNSTSTAIIIDASQNVGIGVSPSTKLHLG
Ga0208785_109083723300025815AqueousMALTKVTRNLLSTGIDDQSTSTAITIDSSGNVGIGN
Ga0208917_118210013300025840AqueousMASTKVPIELSSTPGIVDNSNATAITIDSSENVAL
Ga0208645_102462133300025853AqueousMALTKVSRGLLSTSIVDNGNATAITIDANENVGIG
Ga0208645_113521023300025853AqueousMALTQVSRGLLSTSIVDNGNATAITIDANENVGIGTS
Ga0209119_118866323300025860Pelagic MarineMALTKVSRGLISTSIVDNGNATAITIDSSENVSFTGAATFSGN
Ga0208544_1039128323300025887AqueousMALTKVSRGLLSTGIVDNSTTTAITIDSSENVGIGTS
Ga0208644_104859023300025889AqueousMALTEIPIELSSTPGIVDNSTSTAITIDSSGNVGIGTSSPD
Ga0209929_102834833300026187Pond WaterMAKTTVPIELSSTPSIVDNGNATAITIDSSQNVGIGT
Ga0209830_1018145433300027791MarineMALTEIPIELSSTPSIVDNGNATAITIDSSERVSINTTSATELLNV
Ga0209302_1033869713300027810MarineMALTKVSRGLLSTGIVDNSNATAITLNADESATFAGNVGIGNSNST
Ga0209578_1053562013300027820Marine SedimentMALTKVSRGLLSTSIVDNGNATAITIDANENVGIGG
Ga0209092_1005348713300027833MarineMALTEIPSELSSTPSIVDGGNATAITIDSSENVLVNRTSV
Ga0209092_1006325053300027833MarineMALTKVSRGLLSTGIVDNSNATAITIDSSENIGLGLVPTDFA
Ga0256368_102271623300028125Sea-Ice BrineMALTEIPIELSSTPSIVDGGNATAITISSAELVTVANG
Ga0183826_102271723300029792MarineMATTKIPVELSSTPGIVDNSNATAITIDSSENTTFA
Ga0307488_1031925513300031519Sackhole BrineMALTKIPIELSSTPSIVDGGNATAITIDSSEGVAF
Ga0302126_1012680933300031622MarineMALTKVSRGLLSTGIVDNSNATAITLNADESATFAGNVGI
Ga0307986_1037830423300031659MarineMALTKTPIELSSTPGIVDSSNATAITIDSSENVGIGTSSPRATLDL
Ga0308008_107776133300031687MarineMALTKVVKHLSSTPSIVDEGNATAITINNSEEVTFAD
Ga0308016_1036672413300031695MarineMALTKVVKHLSSTPSIVDEGNATAITINNSEEVTFADDIFVL
Ga0307997_1026509213300031706MarineMALTKTPIELSSTPGIVDNSNATAITIDSSENVGIGTSPAT
Ga0315326_1097502013300031775SeawaterMALIKIPKEMGSTPGIVDNSNATAITIDSSENVGIGRTSIAQPSSGATTL
Ga0315320_1024614023300031851SeawaterMALTEIPIELSSTPGIVDNSNATAITIDSSENVGIGTSTP
Ga0315320_1041548623300031851SeawaterMANTKIPAELSSTPGIIDNSNATAITIDSSENVGIGTSPSTKLH
Ga0315330_1025574913300032047SeawaterMTTKIPAELSSTPSIVDNGDATAITIDSSENIGIGTTSPA
Ga0315321_1030191323300032088SeawaterMALTKTPIELSSTPGIVDNSNATAITIDSSERVLIG
Ga0316202_1006207213300032277Microbial MatMALTKTPIELSSTPSIVDGGNATAITIDDSENVTLAG
Ga0316202_1013093923300032277Microbial MatMAITKVTRTLLSTGIVDNSNATAITIDSSENVGIGLTNQ
Ga0348335_154826_501_6203300034374AqueousMAKTTVPIELSSTPSIVDNGNATAITIDSSENVGINNASP


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