Metagenome / Metatranscriptome Family F038346

Basic Information
Family ID	F038346
Family Type	Metagenome / Metatranscriptome
Number of Sequences	166
Average Sequence Length	80 residues
Representative Sequence	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDHYHSISHGWATENPHDWEEAIAPVLRRLFANGRL
Number of Associated Samples	126
Number of Associated Scaffolds	166

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.89 %
% of genes near scaffold ends (potentially truncated)	73.49 %
% of genes from short scaffolds (< 2000 bps)	87.95 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Unclassified (66.867 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (14.458 % of family members)
Environment Ontology (ENVO)	Unclassified (34.337 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.783 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.73% β-sheet: 21.57% Coil/Unstructured: 64.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 166 Family Scaffolds
PF00027	cNMP_binding	7.83
PF00486	Trans_reg_C	5.42
PF04392	ABC_sub_bind	4.82
PF16868	NMT1_3	1.20
PF02550	AcetylCoA_hydro	1.20
PF00903	Glyoxalase	1.20
PF03401	TctC	0.60
PF08241	Methyltransf_11	0.60
PF08238	Sel1	0.60
PF00072	Response_reg	0.60
PF01494	FAD_binding_3	0.60
PF00230	MIP	0.60
PF13360	PQQ_2	0.60
PF13738	Pyr_redox_3	0.60
PF01844	HNH	0.60
PF03734	YkuD	0.60

COG ID	Name	Functional Category	% Frequency in 166 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.82
COG0427	Propionyl CoA:succinate CoA transferase	Energy production and conversion [C]	1.20
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.20
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.60
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.60
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.60
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.60
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.60
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.60
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.60

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.87 %
All Organisms	root	All Organisms	33.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.87 %
cellular organisms	root	All Organisms → cellular organisms	33.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.60 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.66 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.24 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.01 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.23 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Selenomonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales	0.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.02 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Selenomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae	0.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.60 %
Selenomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas	0.60 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	0.60 %
Selenomonas ruminantium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → Selenomonas ruminantium	0.60 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1094955	Not Available	872	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1012099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1391	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1073047	Not Available	520	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1023378	Not Available	1160	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1035344	Not Available	913	Open in IMG/M
3300000734\|JGI12535J11911_1007277	Not Available	1007	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10061852	Not Available	820	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1026625	Not Available	613	Open in IMG/M
3300000955\|JGI1027J12803_104228518	Not Available	711	Open in IMG/M
3300004479\|Ga0062595_100813878	Not Available	772	Open in IMG/M
3300004633\|Ga0066395_10578416	Not Available	656	Open in IMG/M
3300005294\|Ga0065705_10317650	Not Available	1017	Open in IMG/M
3300005295\|Ga0065707_10166124	Not Available	1506	Open in IMG/M
3300005295\|Ga0065707_10504787	All Organisms → cellular organisms → Bacteria → Proteobacteria	754	Open in IMG/M
3300005328\|Ga0070676_11169236	Not Available	584	Open in IMG/M
3300005329\|Ga0070683_100247212	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300005331\|Ga0070670_100109284	All Organisms → cellular organisms → Bacteria → Proteobacteria	2383	Open in IMG/M
3300005332\|Ga0066388_101109624	All Organisms → cellular organisms → Bacteria → Proteobacteria	1340	Open in IMG/M
3300005332\|Ga0066388_101975019	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300005332\|Ga0066388_108144205	Not Available	523	Open in IMG/M
3300005338\|Ga0068868_100486478	Not Available	1079	Open in IMG/M
3300005340\|Ga0070689_101384416	Not Available	635	Open in IMG/M
3300005435\|Ga0070714_100180794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1919	Open in IMG/M
3300005439\|Ga0070711_100183276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1604	Open in IMG/M
3300005440\|Ga0070705_100249988	Not Available	1244	Open in IMG/M
3300005441\|Ga0070700_101113685	Not Available	655	Open in IMG/M
3300005535\|Ga0070684_100406194	Not Available	1256	Open in IMG/M
3300005577\|Ga0068857_102397545	Not Available	518	Open in IMG/M
3300005615\|Ga0070702_100820079	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005617\|Ga0068859_101524428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → Selenomonas ruminantium	738	Open in IMG/M
3300005618\|Ga0068864_100053611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3480	Open in IMG/M
3300005713\|Ga0066905_100513849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	998	Open in IMG/M
3300005713\|Ga0066905_101407383	Not Available	631	Open in IMG/M
3300005713\|Ga0066905_101417314	Not Available	629	Open in IMG/M
3300005713\|Ga0066905_101584747	Not Available	599	Open in IMG/M
3300005764\|Ga0066903_100920719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1585	Open in IMG/M
3300005764\|Ga0066903_101055210	All Organisms → cellular organisms → Bacteria → Proteobacteria	1493	Open in IMG/M
3300005764\|Ga0066903_101772275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1178	Open in IMG/M
3300005764\|Ga0066903_102426152	Not Available	1015	Open in IMG/M
3300005764\|Ga0066903_102549689	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005764\|Ga0066903_105753424	Not Available	651	Open in IMG/M
3300005764\|Ga0066903_106593843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300005844\|Ga0068862_101210079	Not Available	754	Open in IMG/M
3300006041\|Ga0075023_100323627	Not Available	643	Open in IMG/M
3300006048\|Ga0075363_101005308	Not Available	514	Open in IMG/M
3300006049\|Ga0075417_10056033	Not Available	1715	Open in IMG/M
3300006057\|Ga0075026_100389015	Not Available	781	Open in IMG/M
3300006175\|Ga0070712_100110722	All Organisms → cellular organisms → Bacteria	2048	Open in IMG/M
3300006237\|Ga0097621_100738510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	908	Open in IMG/M
3300006854\|Ga0075425_100011434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9490	Open in IMG/M
3300006871\|Ga0075434_100026326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5696	Open in IMG/M
3300009098\|Ga0105245_10117301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2483	Open in IMG/M
3300009100\|Ga0075418_10383203	All Organisms → cellular organisms → Bacteria → Proteobacteria	1502	Open in IMG/M
3300009156\|Ga0111538_10225636	All Organisms → cellular organisms → Bacteria → Proteobacteria	2374	Open in IMG/M
3300009162\|Ga0075423_11896318	Not Available	644	Open in IMG/M
3300009168\|Ga0105104_10602878	Not Available	625	Open in IMG/M
3300009174\|Ga0105241_11548024	Not Available	640	Open in IMG/M
3300009177\|Ga0105248_10366800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1621	Open in IMG/M
3300009177\|Ga0105248_10437609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1473	Open in IMG/M
3300009792\|Ga0126374_10281592	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300009792\|Ga0126374_10397144	Not Available	962	Open in IMG/M
3300010043\|Ga0126380_10034068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2605	Open in IMG/M
3300010046\|Ga0126384_10186633	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300010046\|Ga0126384_10717479	Not Available	887	Open in IMG/M
3300010046\|Ga0126384_11097402	Not Available	729	Open in IMG/M
3300010048\|Ga0126373_11044830	Not Available	883	Open in IMG/M
3300010048\|Ga0126373_12436363	Not Available	583	Open in IMG/M
3300010359\|Ga0126376_12405416	Not Available	574	Open in IMG/M
3300010360\|Ga0126372_10226762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1581	Open in IMG/M
3300010360\|Ga0126372_12189865	Not Available	602	Open in IMG/M
3300010366\|Ga0126379_10035403	All Organisms → cellular organisms → Bacteria → Proteobacteria	3956	Open in IMG/M
3300010366\|Ga0126379_11721512	Not Available	731	Open in IMG/M
3300010376\|Ga0126381_100435463	Not Available	1835	Open in IMG/M
3300010376\|Ga0126381_101604949	Not Available	940	Open in IMG/M
3300010398\|Ga0126383_11119217	Not Available	877	Open in IMG/M
3300010398\|Ga0126383_13040829	Not Available	548	Open in IMG/M
3300010401\|Ga0134121_10419780	Not Available	1213	Open in IMG/M
3300010403\|Ga0134123_10922898	Not Available	881	Open in IMG/M
3300012494\|Ga0157341_1021062	Not Available	643	Open in IMG/M
3300012505\|Ga0157339_1068849	Not Available	507	Open in IMG/M
3300012513\|Ga0157326_1041533	Not Available	647	Open in IMG/M
3300012958\|Ga0164299_10341011	Not Available	939	Open in IMG/M
3300012961\|Ga0164302_10352688	Not Available	984	Open in IMG/M
3300012961\|Ga0164302_10534419	Not Available	835	Open in IMG/M
3300012971\|Ga0126369_11214207	Not Available	844	Open in IMG/M
3300012971\|Ga0126369_11346137	Not Available	804	Open in IMG/M
3300012971\|Ga0126369_12508877	Not Available	601	Open in IMG/M
3300012985\|Ga0164308_10967886	All Organisms → cellular organisms → Bacteria → Proteobacteria	754	Open in IMG/M
3300012985\|Ga0164308_11350746	Not Available	649	Open in IMG/M
3300012986\|Ga0164304_10501685	Not Available	886	Open in IMG/M
3300012987\|Ga0164307_11304957	Not Available	607	Open in IMG/M
3300012988\|Ga0164306_10293658	Not Available	1183	Open in IMG/M
3300013296\|Ga0157374_10009286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8434	Open in IMG/M
3300013296\|Ga0157374_10897327	Not Available	904	Open in IMG/M
3300014745\|Ga0157377_10685671	Not Available	742	Open in IMG/M
3300015372\|Ga0132256_103207125	Not Available	550	Open in IMG/M
3300015373\|Ga0132257_101365910	Not Available	901	Open in IMG/M
3300015374\|Ga0132255_104083578	Not Available	619	Open in IMG/M
3300015374\|Ga0132255_105567836	Not Available	533	Open in IMG/M
3300016294\|Ga0182041_10314206	Not Available	1304	Open in IMG/M
3300016341\|Ga0182035_11381048	Not Available	632	Open in IMG/M
3300016387\|Ga0182040_10329137	Not Available	1178	Open in IMG/M
3300017939\|Ga0187775_10305835	Not Available	629	Open in IMG/M
3300018060\|Ga0187765_10298719	Not Available	965	Open in IMG/M
3300021078\|Ga0210381_10083637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1013	Open in IMG/M
3300021344\|Ga0193719_10322846	Not Available	645	Open in IMG/M
3300021560\|Ga0126371_10434559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1458	Open in IMG/M
3300021560\|Ga0126371_10592961	Not Available	1257	Open in IMG/M
3300021560\|Ga0126371_11519484	Not Available	797	Open in IMG/M
3300021560\|Ga0126371_12633530	Not Available	609	Open in IMG/M
3300022726\|Ga0242654_10393498	Not Available	530	Open in IMG/M
3300022756\|Ga0222622_10044570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2466	Open in IMG/M
3300025900\|Ga0207710_10280084	Not Available	839	Open in IMG/M
3300025916\|Ga0207663_10589498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	872	Open in IMG/M
3300025916\|Ga0207663_10668852	Not Available	820	Open in IMG/M
3300025935\|Ga0207709_10243282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	1310	Open in IMG/M
3300025935\|Ga0207709_10526272	Not Available	926	Open in IMG/M
3300025936\|Ga0207670_10113344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1958	Open in IMG/M
3300025961\|Ga0207712_11993408	Not Available	520	Open in IMG/M
3300026075\|Ga0207708_10892917	Not Available	769	Open in IMG/M
3300026116\|Ga0207674_11676628	Not Available	604	Open in IMG/M
3300027000\|Ga0207803_1033760	Not Available	605	Open in IMG/M
3300027516\|Ga0207761_1037117	Not Available	955	Open in IMG/M
3300027516\|Ga0207761_1050436	Not Available	810	Open in IMG/M
3300027873\|Ga0209814_10149649	Not Available	1001	Open in IMG/M
3300027907\|Ga0207428_11287243	Not Available	507	Open in IMG/M
3300028380\|Ga0268265_11268390	Not Available	736	Open in IMG/M
3300028381\|Ga0268264_10089550	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300028720\|Ga0307317_10123571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	864	Open in IMG/M
3300028793\|Ga0307299_10099376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1087	Open in IMG/M
3300028796\|Ga0307287_10235619	Not Available	694	Open in IMG/M
3300030979\|Ga0068589_10159784	Not Available	524	Open in IMG/M
3300031057\|Ga0170834_109902367	Not Available	663	Open in IMG/M
3300031544\|Ga0318534_10089655	All Organisms → cellular organisms → Bacteria → Proteobacteria	1754	Open in IMG/M
3300031573\|Ga0310915_10567382	Not Available	805	Open in IMG/M
3300031668\|Ga0318542_10097351	All Organisms → cellular organisms → Bacteria → Proteobacteria	1416	Open in IMG/M
3300031719\|Ga0306917_10071045	All Organisms → cellular organisms → Bacteria → Proteobacteria	2414	Open in IMG/M
3300031724\|Ga0318500_10597015	Not Available	559	Open in IMG/M
3300031740\|Ga0307468_101741626	Not Available	588	Open in IMG/M
3300031763\|Ga0318537_10048935	All Organisms → cellular organisms → Bacteria → Proteobacteria	1531	Open in IMG/M
3300031768\|Ga0318509_10617954	Not Available	603	Open in IMG/M
3300031771\|Ga0318546_10017579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4009	Open in IMG/M
3300031797\|Ga0318550_10458692	Not Available	616	Open in IMG/M
3300031820\|Ga0307473_10969225	Not Available	619	Open in IMG/M
3300031833\|Ga0310917_10024191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3527	Open in IMG/M
3300031833\|Ga0310917_11140154	Not Available	520	Open in IMG/M
3300031892\|Ga0310893_10017483	All Organisms → cellular organisms → Bacteria → Proteobacteria	2062	Open in IMG/M
3300031896\|Ga0318551_10403366	Not Available	778	Open in IMG/M
3300031897\|Ga0318520_10195338	All Organisms → cellular organisms → Bacteria → Proteobacteria	1192	Open in IMG/M
3300031908\|Ga0310900_11598227	Not Available	552	Open in IMG/M
3300031910\|Ga0306923_11943221	Not Available	599	Open in IMG/M
3300031942\|Ga0310916_10200894	All Organisms → cellular organisms → Bacteria → Proteobacteria	1668	Open in IMG/M
3300031942\|Ga0310916_10510422	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300031946\|Ga0310910_10565644	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300032001\|Ga0306922_12035077	Not Available	558	Open in IMG/M
3300032066\|Ga0318514_10177824	All Organisms → cellular organisms → Bacteria → Proteobacteria	1111	Open in IMG/M
3300032075\|Ga0310890_11811333	Not Available	508	Open in IMG/M
3300032090\|Ga0318518_10666017	Not Available	530	Open in IMG/M
3300032180\|Ga0307471_101802687	Not Available	763	Open in IMG/M
3300032205\|Ga0307472_100410950	Not Available	1136	Open in IMG/M
3300032205\|Ga0307472_102225913	Not Available	553	Open in IMG/M
3300034643\|Ga0370545_005667	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.51%
Host-Associated	Host-Associated	23.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.49%
Plants	Host-Associated → Plants	23.49%
Aquatic	Environmental → Aquatic	3.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.04%
Sediment	Environmental → Aquatic → Sediment	1.81%
Freshwater	Environmental → Aquatic → Freshwater	1.20%
Roots	Host-Associated → Plants → Roots	1.20%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.41%
Loam	Environmental → Terrestrial → Soil → Loam	19.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.81%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.20%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.60%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.81%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.60%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.60%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.22%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.01%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.01%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.20%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.20%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.20%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.20%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.60%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000734	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300030979	Forest soil microbial communities from France, for metatranscriptomics studies - Site 11 - Champenoux / Amance forest (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_10949551	2228664022	Soil	VYKQYEEGQWRIERADGAKITFTIALHGEHAWEMLLEDSRRYHSIKHGWATEDPREWENAIAPVLRQFFVNDRLRGVARPTPATNNPNR
AF_2010_repII_A01DRAFT_10120992	3300000580	Forest Soil	MNKVWEKEAWRIEHEEDATITFTIALHGKRAWEMLLEDRDRCHSISHGWATDSLXDWEDAIAPALRRLFVRANLLT*
AF_2010_repII_A01DRAFT_10730471	3300000580	Forest Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRDRSHSISHGWAADSLRDWEDTIAPALRRLFVSGRLDFMTKVPV
AF_2010_repII_A100DRAFT_10233781	3300000655	Forest Soil	MNKQWESERSRIEHADDAKITFTIALHGKHAWEMVLEDSDRYHSISHGWATDNSHDWEEVIAPVLRRLFVNGRLGFVTKVYDQPDGSSANVAM
AF_2010_repII_A100DRAFT_10353443	3300000655	Forest Soil	MNKVWEKEAWRIEHEEDATITFTIALHGKRAWEMLLEDRDRCHSISHGWATDSLCDWEDAIAPALRRLFVRANLLT*
JGI12535J11911_10072771	3300000734	Tropical Forest Soil	MNKIWEKEAWRIEHEEDATITFSIALHGKRAWEMLLEDRDRYHSIGHGWATDSPRDWEEAIAPALRRLFVSGRLDFATKVPVYDFPN
AF_2010_repII_A001DRAFT_100618521	3300000793	Forest Soil	MNKIWEKEASRIEYEEDATITFSISLHGKRAWEMLLEDRDRYHSLGHGWATDDPNDWEDVIAPVL
AF_2010_repII_A10DRAFT_10266252	3300000816	Forest Soil	MNKQWESERSRIEHADDAKITFTIALHGKHAWEMVLEDSDRYHSISHGWATDNSHDWEEVIAPVLRRLFVNGRLGFVTKVYDQ
JGI1027J12803_1042285181	3300000955	Soil	VYKQYEEGQWRIERADGAKITFTIALHGEHAWEMLLEDSRRYHSIKHGWATEDPREWENAIAPVLRQFFVKDRLREVARPTPATNNPNR*
Ga0062595_1008138783	3300004479	Soil	MAPKSNREEERKMNKQWESDRSRIEHADDARITFTIALHGEHAWEMVLEDSDRYHSISHGWATENPHDWEEAIAPLLRRLFVNGRLEFA
Ga0066395_105784162	3300004633	Tropical Forest Soil	MNKVWEKEAWRIEHEEDATITFTIALHGKRAWEMLLEDRDRYHSISHGWATDSLRDWEDAIASALRRLFVSGRLDFVTK
Ga0065705_101879551	3300005294	Switchgrass Rhizosphere	MNKQWEPERSRIEHAEDAKITFTIALHGKHAWEMLLEDTNNFHSISHGWATDNPHDWEAI
Ga0065705_103176501	3300005294	Switchgrass Rhizosphere	MNKQWESERSRIEHADDAKITFTIALHGKHAWEMVLEDNHRYHSISHGWADDNPQDWEEAIAPLLRRLFVNGRVELA
Ga0065707_101661244	3300005295	Switchgrass Rhizosphere	MNKQWEPERSRVEHTNDARITLTIALHGDHAWEMFLEDSNSYHTISHGWATDNPHDWEALIAPAFRRLFLDGRLRFATKV
Ga0065707_105047872	3300005295	Switchgrass Rhizosphere	MNKQWEPERSRIEHAEDAKITFTIALHGKHAWEMLLEDTNNFHGISHGWATENPHDWEAIIAPALRRLFVDGR
Ga0070676_111692362	3300005328	Miscanthus Rhizosphere	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDHYHSISHGWATDNPQDWEDIIAPALCRLFPDDRLRLATKASIDAPGGSCA
Ga0070683_1002472121	3300005329	Corn Rhizosphere	MNKQWEAERSRIEHADDARITFTIALHGEHAWEMVLEDSTSYHSISHGWANENPHDWEEAIAPMLRRLFVKGRLGFATTVPVYDSPNA
Ga0070670_1001092845	3300005331	Switchgrass Rhizosphere	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSNSYHSISHGWATDNPQDWEAIIAPALCRLFLDGRLRLATKAPIDAPGGSCAGVA
Ga0066388_1011096242	3300005332	Tropical Forest Soil	MNKQWEAERSRIEHADNAKITFTIALHGEHAWEMLLEDGRRSHSISHGWATENPHGWEEVIVPVLRRLFVTH*
Ga0066388_1019750192	3300005332	Tropical Forest Soil	MDKQWEPERSRIECAEDARITFTITLNGEHAWEMLLEDGHRYHSINHGWAAENPHEWEEAIAPVLRRLFVNGNGRLAGRDEGLRA*
Ga0066388_1081442051	3300005332	Tropical Forest Soil	MNKQWESERSRIEHADDAKITFTIALHGEHAWEIVLEDRDRYHSISHGWATENPHVWEDAIAPLL
Ga0068868_1004864783	3300005338	Miscanthus Rhizosphere	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKNCHSISHGCATDNPQDWEDIIAPALCRLFPDDRLRLATKA
Ga0070689_1013844161	3300005340	Switchgrass Rhizosphere	MNKQWEAERSRIEHADDARITFTIALRGEHAWEMVLEDSTSYHSINHGWATENPHEWEQTIAPMLRRLFVIG
Ga0070714_1001807941	3300005435	Agricultural Soil	MNKQWESERSRIEHADDARITFTIALHGEHAWEMVLEDSDRYHSISHGWATENPHDWEEAIAPLLRRLFVNGRLEFATKVPMYDSP
Ga0070711_1001832763	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKNYHSISHGWATDNPQDWEDIIAPALCRLFPDDRLRLATRW*
Ga0070705_1002499883	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSNSYHSISHGWATDNPQDWETIIAPALCRLFLDGRLRLATKA
Ga0070700_1011136852	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKSYHSISHGWATDNPQDWEAIIAPALCRLFPDDRLRLATRW*
Ga0070678_1007885782	3300005456	Miscanthus Rhizosphere	MNKQWEAERSRIEHADDARITFTIALRGEHAWEMVLEDSTSYHSINHGWATENPHEWQQTIAPM
Ga0070684_1004061941	3300005535	Corn Rhizosphere	MNKQWEPERSRVEHANDARITLTIALHGDHAWEMLLEDSNSYHSISHGWASDNPQDWEAVIAPALRR
Ga0068857_1023975451	3300005577	Corn Rhizosphere	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKSYHSISHGWATDNPQDWEAIIAPALCRLFP
Ga0070702_1008200792	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDHYHSISHGWATENPHDWEEAIAPVLRRLFANGRLGLATKVPMYDAPNGSSANTNV
Ga0068859_1015244281	3300005617	Switchgrass Rhizosphere	MNKQWEAERSRIEHADDARITFTIALRGEHAWEMVLEDSTSYHSISHGWANENPHDWEEAIAPMLRRLFVKGRLGFATTVPVYDSPNACSATANVA
Ga0068864_1000536116	3300005618	Switchgrass Rhizosphere	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKNYHSISHGWATDNPQDWETIIAPALCRLFLDGRLRLATKAPI
Ga0066905_1005138493	3300005713	Tropical Forest Soil	MNKQWESERSRIEHAVDARITFTIALHGKHAWEMLLDDGDRQHSISHGWATDNPQDWEKAIAPVLRRLFVNGAETNLSADREYSHREAA*
Ga0066905_1014073832	3300005713	Tropical Forest Soil	MNKQWESERSRIELADDAKITFTIALHGKHAWEMLVEDSHRYHSINHGWATDSPHDWEDIIAPVLRPLFVKGRSGFAT
Ga0066905_1014173142	3300005713	Tropical Forest Soil	MNKQWESERSRIEHADDAKITFTIALHGKHAWEMLVEDSHRYHSINHGWATDSPHDWEDIIAPVLRPLFVKGRSGFAT
Ga0066905_1015847471	3300005713	Tropical Forest Soil	MNKIWEKESWRIEHEEDATITFTIALHGKRAWEMLVEDRDRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRLDF
Ga0066903_1009207193	3300005764	Tropical Forest Soil	MHKQYEDEPQRIEHADDATITCTIALHGPHAWEILLEDSRRYHSISPGWATDDPHDWEDAMRTRPDPVLARLPGETFGID*
Ga0066903_1010552103	3300005764	Tropical Forest Soil	VGKQWEPERSRIEHAEDARVIFTIALHGEHAWEMLLEDGQRSHNISHGWATENPHGWEEIIAPALRRLFVNH*
Ga0066903_1017722753	3300005764	Tropical Forest Soil	MDKQWEPERSRIEHAEDAKVTFTIAIHGEHAWEMLLEDGHRYHCISNGWAIENPQGWEEVIAPVLRRLFVDGRLELASAETNLNVDGEYSHREAA*
Ga0066903_1024261522	3300005764	Tropical Forest Soil	MDKQWEPERSRIEHAEDARVTFTIALHGEHAWEMLLEDGRRYNSISHGWAAENPRDWEEVIAPALRRLFVIH*
Ga0066903_1025496891	3300005764	Tropical Forest Soil	MDKQWEPERSRIEHAEDARVTFTIALHGEHAWEMLLEDGQRSHSISHGWATENPQGWEEVIAPVLHRLFVKQ*
Ga0066903_1057534241	3300005764	Tropical Forest Soil	MDKQWEPERSRIECVEDARITFTITLNGEHAWEMLLEDGHRYHSINHGWAAENPHDWEEA
Ga0066903_1065938431	3300005764	Tropical Forest Soil	RIEHEEDATITFTIALHGKRAWEMLLEDRDRCHSISHGWAADSLCDWEDAIAPALRRLFVRANLLT*
Ga0066903_1069013741	3300005764	Tropical Forest Soil	MNKQWQKEPWRIERADDATITFTIALHGKRAWEMLLEDRDRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRLDFMTKVPVYESPNGSSADQNLQRLVAAE*
Ga0068862_1012100792	3300005844	Switchgrass Rhizosphere	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKSYHSISHGWATDNPQDWEAIIAPALCRLFLDGRL
Ga0075023_1003236273	3300006041	Watersheds	MNKQWEPERSRVEHANDARITLIIALHGDHAWEMLLEDSNSYHSISHGWASDNPQACEDAIALLRRLFVNDRLGLAAKVPACDPPDCNSAN
Ga0075363_1010053082	3300006048	Populus Endosphere	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSNSYHSISHGWATDNPQDWETIIAPALCRLFLDGRLRLATKAPI
Ga0075417_100560332	3300006049	Populus Rhizosphere	MTKQWESEGWRIEHEDDARITFTIALHGKHAWEMLLEDSHRYHSISHGWATDNPRDWEDAIVPVLRRLFVNGRLGVRDKGSQV*
Ga0075026_1003890153	3300006057	Watersheds	MNKQWELERSRIEHADDARITFTIALHGEHAWEMLLENRDHYHSISHGWATENPHDWEEAIAPVLR
Ga0070712_1001107223	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDHYHSISHGWATENPHDWEEAIAPVLRRLFANGRL
Ga0097621_1007385101	3300006237	Miscanthus Rhizosphere	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDHYHSISHGWATENPHDWEEAIA
Ga0075425_1000114342	3300006854	Populus Rhizosphere	MNKQCESERSRIEHAEDARITFTIALHGKHAWEVMLEDSHRHQSISHGWATDNPHDWEDAIAPLLRRLFVSGRLGFATKVSIYD*
Ga0075434_10002632610	3300006871	Populus Rhizosphere	MNKQCESERSRIEHAEDARITFTIALHGKHAWEVMLEDSHRHQSISHGWATDNPHDWEDAIAPLLRRLFVSGRLGFATKVPIYD*
Ga0105245_101173011	3300009098	Miscanthus Rhizosphere	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDHYHSISHGWATENPHDWEEAIAPVLR
Ga0075418_103832032	3300009100	Populus Rhizosphere	MNKQCESERSRIEHAEDARITFTIALHGKHAWEVMLEDSHRHQSISHGWATDNPHDWEDAIAPCCVSGRLGFATKVPIYD*
Ga0111538_102256362	3300009156	Populus Rhizosphere	MNKQCESERSRIEHAEDARITFTIALHGKHAWEVMLEDSHRHQSISHGWATDNPHNWEDAIAPLLRRLFVSGRLGFATKVPIYD*
Ga0075423_118963182	3300009162	Populus Rhizosphere	MIKQWESELFDGGKITFTIALHGKLAWEMLLDDGDRHHSISHGWATDNPHDWEEAIAPVLRRHFVD*
Ga0105104_106028782	3300009168	Freshwater Sediment	MNKQWESERSRIEHADDAKITFTIALHGKHAWEMVLEDSHRYHSISHGWATDNPQDWEEAIALLRRLFVNGRLGSA
Ga0105241_115480242	3300009174	Corn Rhizosphere	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKSYHSISHGWATDNPQDWEAIIAPALCRLFPDDRLRLATK
Ga0105248_103668001	3300009177	Switchgrass Rhizosphere	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDHYHSISHGWATENPHDWEEAIAPV
Ga0105248_104376093	3300009177	Switchgrass Rhizosphere	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDHYHSISHGWATENPHDWEEAIAPVLRRLFANGRLGLAT
Ga0126374_102815922	3300009792	Tropical Forest Soil	MDKQWEPERLRIECAEDARITFTITLNGEHAWEMLLEDGHRYHSINHGWAAENPHDWEEAIAPVLRRTS*
Ga0126374_103971441	3300009792	Tropical Forest Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRDRSHSISHGWAADSLRDWEDTIAPALRRLFVSGRLDF
Ga0126380_100340685	3300010043	Tropical Forest Soil	MQTENREKKMNKQWESERSRIEHAVDARITFTIALHGKHAWEMLLDDGDRQHSISHGWATDNPQDWEKAIAPVLRRLFVNGAETNLSADREYSHREAA*
Ga0126384_101866331	3300010046	Tropical Forest Soil	MAPKSNREEEKKMNKQWESERSRVEHADDARITFTIALHGKHAWEMLLEDSHRYHSISHGWATDNSHDWEEVIAPVLRRLFVNGRLAFATKVPMYDS
Ga0126384_107174792	3300010046	Tropical Forest Soil	MDKQWEPERSRIECAEDARITFTITLNGEHAWEMLLEDGHRYHSINHGWAAENPHDWEEAIAPVLRRLFVNGNGRLAGRDEGLRA*
Ga0126384_110974023	3300010046	Tropical Forest Soil	MNKQWEPERSRVEHATDARITFTIALHGEHAWEMLLEDNNSYHSIGHGWAIENPHDWETVIAPALRQLFLDGRLSSVTKATSC
Ga0126373_110448302	3300010048	Tropical Forest Soil	MNKIWEKEAWRIEHEEDATITFTIALHGKRAWEMLLEDRDRYHSIGHGWATDSPRDWEEAIAPALRRL
Ga0126373_124363632	3300010048	Tropical Forest Soil	MDKQWEPERSRIEHAEDARVTFTIALHGEHAWEMLLEDGHRYHCISNGWAIENPQGWEEVIAPVLRRLFVNGRLELASAETNLNVDGDYSHREAA*
Ga0126376_124054161	3300010359	Tropical Forest Soil	MAPKSNREEEKKMNKQWESERSRIEHADDAKITFTIALHGERAWEMLLEDSHRYQSTSHGWATDNSHDWEE
Ga0126372_102267622	3300010360	Tropical Forest Soil	MERSRIEQANDARITLTIALHGDHAWEMLLEDSNSYHSISHGWATDNPQDWEGIIAPALRRLFLDGRLRLATKAPIDAPGGSGAGVALYDPPALQPRNTR*
Ga0126372_121898651	3300010360	Tropical Forest Soil	MDKQWEPERSRIEHAEDARVTFTIALHGEHAWEMLLEDGHRYHCVSNGWAIGNPQGWEEVIAPVLRRLF
Ga0126379_100354036	3300010366	Tropical Forest Soil	MNKVWEKEAWRIEHEEDATITFTIALHGKRACEMLLEDRDRYHSISHGWATDSLRDWEDAIAPALRRLFVRANLLT*
Ga0126379_117215122	3300010366	Tropical Forest Soil	MDKQWEPERSRIEHAEDARVTFTITLHGTHAWEMLLQDGHRYHCISHGWAIENPQGWEEVIAPVLHRLFVKQ*
Ga0126381_1004354631	3300010376	Tropical Forest Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRDRYHSISHGWATDRLRDWEDIIAPALRRLFVSGRLD
Ga0126381_1016049491	3300010376	Tropical Forest Soil	HAEDARVTFTIALHGEHAWEMLLEDGRRYNSISHGWAAENPRDWEEVIAPALRRLFVIH*
Ga0126383_111192172	3300010398	Tropical Forest Soil	MDKQWEPERSRIECAEDARITFTITLSGEHAWEMLLEDGHRYHSINHGWAAENPHDWEEAIAPVLRRLFVNGNGRLAGRDEGLRA*
Ga0126383_130408292	3300010398	Tropical Forest Soil	MAPKSNREEEKKMNKQWESERSRVEHADDARITFTIALHGKHAWEMLLEDSHRYHSISHGWATDNSHDWEEVIAPVLRR
Ga0134121_104197803	3300010401	Terrestrial Soil	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKNCHSISHGCATDNPQDWEDIIAPALCRLFPDDRLRLA
Ga0134123_109228982	3300010403	Terrestrial Soil	MNKQWEPERSRVEHANDARITLTIALHGDHAWEMLLEDSNSYHSISHGWASDNPQDWEAVIAPGLRRLFLDGLPLATKAPIDAPDG
Ga0157341_10210621	3300012494	Arabidopsis Rhizosphere	MKMNKQWEAERSRIEHADDARITFTIALRGEHAWEMVLEDSTSYHSISHGWATENPHDWEEAIAPMLRRLFVKGRLGFATTVPVYDSPNACSA
Ga0157339_10688491	3300012505	Arabidopsis Rhizosphere	VDGRTGPKSNCEVDKKMNKQWEAERSRIEHADDARITFTIALRGEHAWEMVLEDSTSYHSISHGWANENPHDWEEAIAPMLRRLFVKG
Ga0157326_10415331	3300012513	Arabidopsis Rhizosphere	MNKQWEPERSRVEHANDSRITFTIALHGDHAWEMLLEDSNSYHSISHGWATDNPQDWEAIVAPALCRLFPDDRL
Ga0164299_103410112	3300012958	Soil	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKNCHSISHGCATDHPQDWEDIIAPALCRLFPDDRLRLATK
Ga0164302_103526881	3300012961	Soil	MNKQWEPERSRVEHANDARITLTIALHGDHAGEMLLEDSNSYHSISHGWASDNPQDWEAVIAPALRRLFLDGLRLTTKTPIDAPDGSAVGVPL
Ga0164302_105344192	3300012961	Soil	MKKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKSYHSISHGWATDNPQDWETIIAPALCRLFLDGRLRLATKAPIDAPGGSG
Ga0126369_112142071	3300012971	Tropical Forest Soil	MNKVWEKEAWRIEHEEDATITFTIALHGKRAWEMLLEDRDRYHSISHGWATDSLRDWEDAIASALRRLFVSGRLDLVTK
Ga0126369_113461371	3300012971	Tropical Forest Soil	MDGQWEPERSRIEHAEDAKITFTIALHGEHAWEMLLEDDQRRHSISHGWATENPHGWEEVIAPVLRRLFVNH*
Ga0126369_125088771	3300012971	Tropical Forest Soil	KEPWRIERADDATITFTIALHGKRAWEMLLEDRDRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRLDFMTKVPVYESPNGSSADQNLQRLVAAE*
Ga0164308_109678861	3300012985	Soil	MNKQWEPERSRVEHTNDARITLTIALHGDHAWEMFLEDSNSYHTISHGWATDNPHDWEALIAPALRRLFLDGL
Ga0164308_113507461	3300012985	Soil	MNKQWEPERSRVEHANDARITFTIALHGGHAWEMLLEDSNSYHSISHRCATDNPQDWETIIAPALCRLFLDGR
Ga0164304_105016852	3300012986	Soil	MAPKSNREEERKMNKQWESDRSRIEHADDARITFTIALHGEHAWEMVLEDSDRYHSISHGWATENPHDWEEAIAPLLRRLFVNGRLGFATKVPMYD
Ga0164307_113049572	3300012987	Soil	MKKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKNCHSISHGCATDNPQDWEDIIAPALCRLFPDDRLRLATKASIDAPGG
Ga0164306_102936581	3300012988	Soil	MKKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSNSYHSISHGWASDNPQDWEAVIAPALRRLFLDGLRLATKAPIDAPDGSAVGVPLYD
Ga0157374_100092865	3300013296	Miscanthus Rhizosphere	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDHYHSISHGWATENPHDWEEDIAPVLRRLFANGRLGLATNVPM*
Ga0157374_108973272	3300013296	Miscanthus Rhizosphere	MNKQWEPERSRVEHANDARITLTIALHGDHAWEMLLEDSNSYHSISHGWASDNPQDWEAVIAPALRRLFLDGLRLATKAPIDAPDGSA
Ga0157377_106856711	3300014745	Miscanthus Rhizosphere	MKMNKQWEAERSRIEHADDARITFTIALHGEHAWEMVLEDSTSYHSISHGWANENPHDWEEAIAPMLRRLFVKGRLGFATTVPVYDSPNACSATANVAM
Ga0132256_1032071251	3300015372	Arabidopsis Rhizosphere	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDRYHSISHGWATENPHDWEEAIAPV
Ga0132257_1013659101	3300015373	Arabidopsis Rhizosphere	MNKIWEKEAWRIEHEEDATITFTIALHGKRAWEMLLEDRDRYHSINHGWATDSLRDWEDVIAPALRRLFVSGRLDFVTKVPV
Ga0132255_1040835781	3300015374	Arabidopsis Rhizosphere	VDGRTGPKSNCEVEKKMNKQWEAERSRIEHADDARITFTIALRGEHAWEMVLEDSTSYHSISHGWATENPHEWEQTIAPMLRRLFVKGRLGLATTVP
Ga0132255_1055678362	3300015374	Arabidopsis Rhizosphere	MKMNKQWEAKRSRIEHADDARITFTIALHGEHAWEMVLEDNTSYHSISHGWATENPHDWEEAIAPMLRRLFVKGRLGFATTVPVYDSPNACSANANVAM
Ga0182041_103142062	3300016294	Soil	RIGHAEDAKITFTIALHGEHAWEMLLEDGQRSHSISHGWATENPHGWEEVIAPVLRRLFVKH
Ga0182035_113810482	3300016341	Soil	MDKQWEPERSRIEHAEDARVTFTIALHGEHAWEMLLEDGQRSHSISHGWATENPQGWEEVIAPVLHRLFVK
Ga0182040_103291371	3300016387	Soil	MNKQWEKEPWRIEHADDAKITFTIALHDERAWEMLLEDRDCYHSICHGWATENPRGWEEAIAPALRRLFVNGRLDFATKVPVYGSQ
Ga0182038_115592901	3300016445	Soil	MNKIWEKEAWRIEHEEDATITFTIALHGKRAWEMLLEDRDRYHSIGHGWATDSPRDWEEAIAP
Ga0187775_103058351	3300017939	Tropical Peatland	MNKQWESERSRIEHADDARITFTIALHGEHAWKMLLEDSHRCHSISHGWATENPHNWEEAIAPVLRRLFVNGRLGFATKVP
Ga0187765_102987191	3300018060	Tropical Peatland	MNKQWESERSRIEHADDAKITLTIALHGEHAWEILVEDSHRYHSIGHGWATENPFDWEKAIAPVLRRLFVNGRLGLAKKVPM
Ga0210381_100836372	3300021078	Groundwater Sediment	MTKQWESERSLIEHADDARITFTIALHGKHAWEMLLEDRDCCNSISHGWASDNPHDWEEAIAPVLRRLFLNGRLGLATKVP
Ga0193719_103228462	3300021344	Soil	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDSHRYHSISHGWATEDPHDWEEAIAPVLRRLFAKRPL
Ga0126371_104345592	3300021560	Tropical Forest Soil	MKKQWEAERSRIEHADNAKITFTIALHGEHAWEMLLEDGRRSHSISHGWATENPHGWEEVIAPVLRRLFVTH
Ga0126371_105929611	3300021560	Tropical Forest Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRNRYHSISHGWATDSLRDWEDTIAPALRRLFVSGR
Ga0126371_115194841	3300021560	Tropical Forest Soil	MNKVWEKEAWRIEHEEDATITFTIALHGKRAWEMLLEDRDRCHSISHGWATDSLCDWEDAIAPALRRLFVRANLLT
Ga0126371_126335301	3300021560	Tropical Forest Soil	MNKIWEKEAWRIEHEENATITFTIALHGKRAWEILLEDRDRYHSISHGWATDRLRDWEDNIAPALRRLFVSGRLDFLRKVPVYESPNGSSADTSVPMCD
Ga0242654_103934981	3300022726	Soil	MNKQWESERSRIEHAGYARITFTIALHGEHAWEMLLEVSHRYHSIDHGWATEDPHDWEKAIA
Ga0222622_100445701	3300022756	Groundwater Sediment	MTKQWESERSLIEHADDARITFTIALHGKHAWEMLLEDRDCCNSISHGWASDNPHDWEEAIAPVLRRLFLNGRLGLATKVPMYDAANGSSANTDVPMYAVAP
Ga0207710_102800841	3300025900	Switchgrass Rhizosphere	MNKQWEPERSRIEHAEDAKITFTIALHGKHAWEMLLEDTNNFHGISHGWATENPHDWEAIIAPALRRLFVDG
Ga0207663_105894982	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MNKQWEAERSRIEHADDARITFTIALHGEHAWEMVLEDSTSYHSISHGWANENPHDWEEAIAPMLRRLFVKGRLGFATTVPVYDSPNACSAN
Ga0207663_106688522	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MNKQWDPERSRVEHANDARITFTIALHGDHAWEMLLEDSKNYHSISHGWATDNPQDWEDIIAPALCRLFPDDRLRLATKASID
Ga0207709_102432821	3300025935	Miscanthus Rhizosphere	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDHYHSISHGWATENPHDWEEAIAPVLRRLFANGRLGLATNVPMYDAP
Ga0207709_105262721	3300025935	Miscanthus Rhizosphere	MNKQWEPERSRVEHANDARITLTIALHGDHAWEMLLEDSNSYHSISHGWASDNPQDWEAVIAPALRRLFLDGLRLATKAPIDAP
Ga0207670_101133441	3300025936	Switchgrass Rhizosphere	MNKQWEAERSRIEHADDARITFTIALRGEHAWEMVLEDSTSYHSINHGWATENPHEWEQTIAPMLRRLFVIGRLG
Ga0207712_119934081	3300025961	Switchgrass Rhizosphere	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDHYHSISHGWATENPHDWEEAIAPVLRRLFANGRLGLATKVPMYDAPNGSSANTNVP
Ga0207708_108929172	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKNCHSISHGCATDNPQDWEDIIAPALCRLFPDDRLRLATRW
Ga0207674_116766282	3300026116	Corn Rhizosphere	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKSYHSISHGWATDNPQDWEAIIAPALCRLFPDDRLRLATKAP
Ga0207803_10337601	3300027000	Tropical Forest Soil	MNKIWEKEAWRIEHEEDATITFSIALHGKRAWEMLLEDRDRYHSIGHGWATDSPRDWEEAIAPALRRLFVSGRLDFATKVPVYDFPNGNSANTSVPMY
Ga0207761_10371173	3300027516	Tropical Forest Soil	MNKIWEKEAWRIEHEEDATITFSIALHGKHAWEILLEDRDRYHSIGHGWATDSPRDWEEAIAPALRR
Ga0207761_10504361	3300027516	Tropical Forest Soil	MNKIWEKEAWRIEHEEDATITFSIALHGKRAWEMLLEDRDRYHSVGHGWATDSPRDWEEAIAPALRRLFVSGRLD
Ga0209814_101496493	3300027873	Populus Rhizosphere	MTKQWESEGWRIEHEDDARITFTIALHGKHAWEMLLEDSHRYHSISHGWATDNPRDWEDAIVPVLRRLFVNGRLGVRDKGSQV
Ga0207428_112872432	3300027907	Populus Rhizosphere	MNKQCESERSRIEHAEDARITFTIALHGKHAWEVMLEDSHRHQSISHGWATDNPHDWEALIAPAFRRLFLDGRLRFATKVPIDAADGT
Ga0268265_112683901	3300028380	Switchgrass Rhizosphere	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKSYHSISHGWATDNPQDWEAIIAPA
Ga0268264_100895506	3300028381	Switchgrass Rhizosphere	MNKQWESERSRIEHADDARITFTIALHGEHAWEMLLEDRDHYHSISHGWATENPHDWEEAIAPVLRR
Ga0307317_101235712	3300028720	Soil	MTKQWESERSLIEHADDARITFTIALHGKHAWEMLLEDRDCCNSISHGWASDNPHDWEEAIAPVLRRLFLNGRLGLATKVPMYDAANGSSAN
Ga0307299_100993761	3300028793	Soil	MTKQWESERSLIEHADDARITFTIALHGEHAWEMLLEDRDHCHSISHGWATENPHDWEEAIAPVLRRLFANGRLGLATKVPMY
Ga0307287_102356192	3300028796	Soil	MNKQWESERSRIEHADDARITFTIALHGEHAWEMVLEDSHRYHSISHGWATENPHVWEEAIAPLLRRLFAKGRLGFATKVPTYDPPTVAPLR
Ga0068589_101597842	3300030979	Soil	MNKQWEPERSRIEHADDARITFTIALQGEHAWEMLLEDSHRYHSISHGWATEDPHDWEKAIAPVLRRLFASGRLA
Ga0170834_1099023672	3300031057	Forest Soil	MNKQWESERSRIEHADDARITFTVALHGEHAWEMLLEDRDRYHSISHGWATENPHDWEEAIAPVLRRLFANGRLALVTK
Ga0318534_100896551	3300031544	Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRNRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRFDFMTKVPVHDSPNGSSADTRDGGQNR
Ga0310915_105673822	3300031573	Soil	MDGQWEPERSRIGHAEDAKITFTIALHGEHAWEMLLEDGQRSHSISHGWATENPQGWEEVIAPVLHRLFVKQ
Ga0318542_100973513	3300031668	Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRNRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRFD
Ga0306917_100710454	3300031719	Soil	MNKIWEKEAWRIEHEEDATITFTIALHGKRAWEMLLEDRDRYHSIGHGWATDSPHDWEEAIAPALRRLFVSGRLDFATKVPVCDPPNDSSANTNVP
Ga0318500_105970151	3300031724	Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRNRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRFDFMTKVPVHDSPNGSSADTRDG
Ga0307468_1017416261	3300031740	Hardwood Forest Soil	MNKQWEAERSRIEHADDAKITFTIALHGEQDWEMVLEDRDRYHSISHGWAIENPQACEDAIALLRRLFVNGRLGFATKVP
Ga0318537_100489351	3300031763	Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRNRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRFDFMTKVPVHDSPNGSSADTRDGGQNRTEQS
Ga0318509_106179542	3300031768	Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRNRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRFDFMTK
Ga0318546_100175794	3300031771	Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRNRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRFDFMTKVPVHDSPNGSSADTRDGG
Ga0318550_104586921	3300031797	Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRNRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRFDFMTKVPVHDSPNGSSAD
Ga0307473_109692251	3300031820	Hardwood Forest Soil	VYKQYEEEQWRIEHADGAKITFTIALHGEHAWEMLLEDSRRYHSIKHGWATEDPREWENAIAPVLRQFFVKDRLREVARLTPATNNPNR
Ga0310917_100241911	3300031833	Soil	MNKIWEKEAWRIEHEEDATITFTIALHGKRAWEMLLEDRDRYHSIGHGWATDSPRDWEEAIAPAL
Ga0310917_111401542	3300031833	Soil	MDKQWEPERSRIEHAEDARVTFTIALHGEHAWEMLLEDGQRSHSISHGWATENPQGWEEVIAPVLHRLFVKQ
Ga0310893_100174834	3300031892	Soil	MNKQWEPERSRVEHANDARITFTIALHGDHAWEMLLEDSKNYHSISHGWATDNPQDWEDIIAPALCRLFPDDRLRLATKASIDAPG
Ga0318551_104033661	3300031896	Soil	MNKQWQKEPRRIEQADDATITFTIALHGKRAWEMLLEDRNRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRFDFMTKVPVH
Ga0318520_101953381	3300031897	Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRNRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRFDFMTKVPVHDSPNGS
Ga0310900_115982272	3300031908	Soil	MNKQWEPERSRIEHAEDAKITFTIALHGKHAWEMLLEDTNNFHGISHGWATDNPHDWEAIIAPALRR
Ga0306923_119432211	3300031910	Soil	MDKQWEPERSRIEHAEDARVTFTIALHSEHAWEMLLEDGQRSHSISHGWATENPQGWEEVIAPVLHRLFVKQ
Ga0310916_102008941	3300031942	Soil	MNKIWEKEAWRIEHEEDATITFTIALHGKRAWEMLLEDRDRYHSIGHGWATDSPRDWEEAIAPALRRLFVRGRLDFATKVPEYDSP
Ga0310916_105104222	3300031942	Soil	MDGQWEPERSRIGHAEDAKITFTIALHGEHAWEMLLEDGQRSHSISHGWATENPHGWEEVIAPVLRRLFVKH
Ga0310910_105656441	3300031946	Soil	QWEPERSRIGHAEDAKITFTIALHGEHAWEMLLEDGQRSHSISHGWATENPHGWEEVIAPVLRRLFVKH
Ga0306922_120350771	3300032001	Soil	MNKQWEKEPWRIEHADDAKITFTIALHDERAWEMLLEDRDRYHSICHGWATENPRGWEEAIAPALRRLFVNGRLDFATKVPVYGSQ
Ga0318514_101778243	3300032066	Soil	MNKQWQKEPWRIEQADDATITFTIALHGKRAWEMLLEDRNRYHSISHGWATDSLRDWEDTIAPALRRLFVSGRFDFMTKVPV
Ga0310890_118113332	3300032075	Soil	MNKQWEPERSRIEHAEDAKITFTIALHGKHAWEMLLEDTNNFHGISHGWATDNPHDWEAIIAP
Ga0318518_106660171	3300032090	Soil	MNKIWEKEAWRIEHEEDATITFTIALHGKRAWEMLLEDRDRYHSIGHGWATDSPRDWEEAIAPALRRLFVSGRLDFATKVPVCDPPND
Ga0307471_1018026871	3300032180	Hardwood Forest Soil	MNKQWEPERSRVEHANDARITLTIALHGDHAWEMLLEDSNSYHSISHGWASDNPQDWEAVIAPALRRLF
Ga0307472_1004109502	3300032205	Hardwood Forest Soil	MNKQWEPERSRVEHTNDARITLTIALHGDHAWEMFLEDSNSYHTISHGWATDNPHDWEALIAPALRRLFLD
Ga0307472_1022259131	3300032205	Hardwood Forest Soil	MNKQWEPERSRVEHANDARITLTIALHGDHAWEMLLEDSNSYHSISHGWASDNPQDWEAVIAPALRRLFLDGLRLATKAPIDA
Ga0370545_005667_1367_1660	3300034643	Soil	MTKQWESERSRIEHADDARITFTIALHGKHAWEMLLEDRDCCNSISHGWASDNPHDWEEAIAPVLRRLFLNGRLGLATKVPMYDAANGSSANTDVPM

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038346

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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