Metagenome / Metatranscriptome Family F038763

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038763
Family Type	Metagenome / Metatranscriptome
Number of Sequences	165
Average Sequence Length	55 residues
Representative Sequence	MCPFCLASMGLIVAGATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSR
Number of Associated Samples	130
Number of Associated Scaffolds	165

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.82 %
% of genes near scaffold ends (potentially truncated)	27.88 %
% of genes from short scaffolds (< 2000 bps)	63.03 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.455 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (15.758 % of family members)
Environment Ontology (ENVO)	Unclassified (30.303 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.485 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.37% β-sheet: 0.00% Coil/Unstructured: 56.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 165 Family Scaffolds
PF05988	DUF899	43.64
PF00106	adh_short	5.45
PF03795	YCII	4.24
PF01638	HxlR	3.64
PF04542	Sigma70_r2	3.03
PF01909	NTP_transf_2	3.03
PF04191	PEMT	2.42
PF13427	DUF4111	2.42
PF03460	NIR_SIR_ferr	1.82
PF00583	Acetyltransf_1	1.21
PF02952	Fucose_iso_C	0.61
PF06841	Phage_T4_gp19	0.61
PF08281	Sigma70_r4_2	0.61
PF12680	SnoaL_2	0.61
PF08327	AHSA1	0.61
PF11799	IMS_C	0.61
PF07702	UTRA	0.61
PF00069	Pkinase	0.61
PF12704	MacB_PCD	0.61
PF02687	FtsX	0.61
PF00698	Acyl_transf_1	0.61

COG ID	Name	Functional Category	% Frequency in 165 Family Scaffolds
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	43.64
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.24
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	3.64
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	3.03
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	3.03
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	3.03
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	3.03
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.42
COG2407	L-fucose isomerase or related protein	Carbohydrate transport and metabolism [G]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.67 %
Unclassified	root	N/A	13.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.06 %
Unclassified	root	N/A	13.33 %
Viruses	superkingdom	All Organisms → Viruses	0.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.45 %
Unclassified	root	N/A	13.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.21 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.03 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.21 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.61 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.03 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.21 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.03 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.21 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.61 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.03 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.21 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.61 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.03 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.21 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.61 %
Antrihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Antrihabitans	0.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.03 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	1.21 %
Antrihabitans stalactiti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Antrihabitans → Antrihabitans stalactiti	0.61 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.03 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	1.21 %
Antrihabitans stalactiti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Antrihabitans → Antrihabitans stalactiti	0.61 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17486401	All Organisms → cellular organisms → Bacteria	3873	Open in IMG/M
2162886012\|MBSR1b_contig_10152996	Not Available	947	Open in IMG/M
3300002907\|JGI25613J43889_10009718	All Organisms → cellular organisms → Bacteria → Proteobacteria	2658	Open in IMG/M
3300004092\|Ga0062389_100104476	All Organisms → cellular organisms → Bacteria	2520	Open in IMG/M
3300004633\|Ga0066395_10017275	All Organisms → cellular organisms → Bacteria	2805	Open in IMG/M
3300004633\|Ga0066395_10648754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	623	Open in IMG/M
3300005167\|Ga0066672_10373807	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300005172\|Ga0066683_10900316	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005174\|Ga0066680_10146208	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300005176\|Ga0066679_11038845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	508	Open in IMG/M
3300005178\|Ga0066688_10047905	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300005180\|Ga0066685_10120804	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300005181\|Ga0066678_10299708	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300005186\|Ga0066676_10368387	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300005293\|Ga0065715_10942065	Not Available	562	Open in IMG/M
3300005295\|Ga0065707_10422695	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300005450\|Ga0066682_10379215	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300005451\|Ga0066681_10263519	Not Available	1048	Open in IMG/M
3300005468\|Ga0070707_100098622	All Organisms → cellular organisms → Bacteria	2830	Open in IMG/M
3300005471\|Ga0070698_100021419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6770	Open in IMG/M
3300005534\|Ga0070735_10193339	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300005536\|Ga0070697_100080395	All Organisms → cellular organisms → Bacteria	2685	Open in IMG/M
3300005544\|Ga0070686_100312191	All Organisms → Viruses → Predicted Viral	1169	Open in IMG/M
3300005546\|Ga0070696_100060077	All Organisms → cellular organisms → Bacteria	2658	Open in IMG/M
3300005554\|Ga0066661_10703808	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	593	Open in IMG/M
3300005557\|Ga0066704_10276387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1139	Open in IMG/M
3300005563\|Ga0068855_101346930	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005591\|Ga0070761_10017455	All Organisms → cellular organisms → Bacteria	3987	Open in IMG/M
3300005602\|Ga0070762_10443399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	843	Open in IMG/M
3300005764\|Ga0066903_100265200	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2671	Open in IMG/M
3300005764\|Ga0066903_101992783	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300006176\|Ga0070765_100109948	All Organisms → cellular organisms → Bacteria	2399	Open in IMG/M
3300006755\|Ga0079222_10071516	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1709	Open in IMG/M
3300006797\|Ga0066659_10034940	All Organisms → cellular organisms → Bacteria	3046	Open in IMG/M
3300006797\|Ga0066659_10829580	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300006804\|Ga0079221_10064025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1694	Open in IMG/M
3300006854\|Ga0075425_100001002	All Organisms → cellular organisms → Bacteria	27104	Open in IMG/M
3300006854\|Ga0075425_100189311	All Organisms → cellular organisms → Bacteria	2364	Open in IMG/M
3300007258\|Ga0099793_10079069	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300009012\|Ga0066710_100158607	All Organisms → cellular organisms → Bacteria	3160	Open in IMG/M
3300009137\|Ga0066709_100241434	All Organisms → cellular organisms → Bacteria	2410	Open in IMG/M
3300009137\|Ga0066709_100245582	All Organisms → cellular organisms → Bacteria	2392	Open in IMG/M
3300009137\|Ga0066709_102082625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300009137\|Ga0066709_102206037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300009137\|Ga0066709_102354034	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300009137\|Ga0066709_103897473	Not Available	542	Open in IMG/M
3300010048\|Ga0126373_10038103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4205	Open in IMG/M
3300010048\|Ga0126373_10073407	All Organisms → cellular organisms → Bacteria	3097	Open in IMG/M
3300010048\|Ga0126373_10189866	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300010323\|Ga0134086_10283564	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300010335\|Ga0134063_10107479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300010336\|Ga0134071_10068939	All Organisms → cellular organisms → Bacteria → Proteobacteria	1637	Open in IMG/M
3300010358\|Ga0126370_10001913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9685	Open in IMG/M
3300010358\|Ga0126370_10064496	All Organisms → cellular organisms → Bacteria	2394	Open in IMG/M
3300010358\|Ga0126370_10328126	Not Available	1227	Open in IMG/M
3300010358\|Ga0126370_10598852	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300010358\|Ga0126370_12430945	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300010359\|Ga0126376_10849594	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300010360\|Ga0126372_12097453	Not Available	613	Open in IMG/M
3300010361\|Ga0126378_10440607	All Organisms → cellular organisms → Bacteria → Acidobacteria	1417	Open in IMG/M
3300010361\|Ga0126378_11365442	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300010361\|Ga0126378_12386986	Not Available	604	Open in IMG/M
3300010361\|Ga0126378_13313330	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300010366\|Ga0126379_13556805	Not Available	522	Open in IMG/M
3300010366\|Ga0126379_13725375	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300010376\|Ga0126381_100006711	All Organisms → cellular organisms → Bacteria	12764	Open in IMG/M
3300010376\|Ga0126381_100488161	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
3300010376\|Ga0126381_100724621	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300010379\|Ga0136449_102689907	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300010379\|Ga0136449_104551816	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300010863\|Ga0124850_1071862	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300012199\|Ga0137383_10035521	All Organisms → cellular organisms → Bacteria	3523	Open in IMG/M
3300012200\|Ga0137382_10379066	Not Available	995	Open in IMG/M
3300012202\|Ga0137363_10052935	All Organisms → cellular organisms → Bacteria	2917	Open in IMG/M
3300012205\|Ga0137362_11742554	Not Available	510	Open in IMG/M
3300012207\|Ga0137381_11380444	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012208\|Ga0137376_11280287	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300012210\|Ga0137378_11137758	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012211\|Ga0137377_11574337	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300012350\|Ga0137372_10268494	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300012359\|Ga0137385_10477247	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300012361\|Ga0137360_11591554	Not Available	558	Open in IMG/M
3300012532\|Ga0137373_11241986	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300012918\|Ga0137396_10061479	All Organisms → cellular organisms → Bacteria	2604	Open in IMG/M
3300012925\|Ga0137419_10998907	Not Available	693	Open in IMG/M
3300012927\|Ga0137416_10119103	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300012948\|Ga0126375_10889745	Not Available	714	Open in IMG/M
3300012972\|Ga0134077_10354523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	626	Open in IMG/M
3300015357\|Ga0134072_10082839	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300016270\|Ga0182036_10441375	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300016371\|Ga0182034_10257977	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300016387\|Ga0182040_10559329	Not Available	921	Open in IMG/M
3300016404\|Ga0182037_10046136	All Organisms → cellular organisms → Bacteria	2881	Open in IMG/M
3300016404\|Ga0182037_11642511	Not Available	572	Open in IMG/M
3300017656\|Ga0134112_10495919	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300017927\|Ga0187824_10008750	All Organisms → cellular organisms → Bacteria	2881	Open in IMG/M
3300017927\|Ga0187824_10013750	All Organisms → cellular organisms → Bacteria	2346	Open in IMG/M
3300017935\|Ga0187848_10431589	Not Available	541	Open in IMG/M
3300017936\|Ga0187821_10279789	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300017973\|Ga0187780_10048790	All Organisms → cellular organisms → Bacteria	2941	Open in IMG/M
3300018058\|Ga0187766_10668409	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300018062\|Ga0187784_10320031	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300018088\|Ga0187771_10541455	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300018090\|Ga0187770_10009641	All Organisms → cellular organisms → Bacteria	6078	Open in IMG/M
3300020170\|Ga0179594_10077370	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300020199\|Ga0179592_10002078	All Organisms → cellular organisms → Bacteria	8297	Open in IMG/M
3300020579\|Ga0210407_10378762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Antrihabitans → Antrihabitans stalactiti	1107	Open in IMG/M
3300020579\|Ga0210407_11023571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	629	Open in IMG/M
3300020580\|Ga0210403_11195795	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300020582\|Ga0210395_10000088	All Organisms → cellular organisms → Bacteria	73499	Open in IMG/M
3300020582\|Ga0210395_10013679	All Organisms → cellular organisms → Bacteria	5998	Open in IMG/M
3300021046\|Ga0215015_11064451	Not Available	623	Open in IMG/M
3300021168\|Ga0210406_10000075	All Organisms → cellular organisms → Bacteria	154083	Open in IMG/M
3300021170\|Ga0210400_10062552	All Organisms → cellular organisms → Bacteria	2903	Open in IMG/M
3300021171\|Ga0210405_10733796	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300021420\|Ga0210394_10015090	All Organisms → cellular organisms → Bacteria	7381	Open in IMG/M
3300021420\|Ga0210394_10505185	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300021476\|Ga0187846_10012177	All Organisms → cellular organisms → Bacteria	4117	Open in IMG/M
3300021560\|Ga0126371_10007260	All Organisms → cellular organisms → Bacteria	9895	Open in IMG/M
3300021560\|Ga0126371_10007309	All Organisms → cellular organisms → Bacteria	9855	Open in IMG/M
3300021560\|Ga0126371_10012432	All Organisms → cellular organisms → Bacteria	7716	Open in IMG/M
3300021560\|Ga0126371_10020501	All Organisms → cellular organisms → Bacteria	6094	Open in IMG/M
3300021560\|Ga0126371_11376029	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300021560\|Ga0126371_11803528	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300024330\|Ga0137417_1457830	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300025899\|Ga0207642_10978103	Not Available	544	Open in IMG/M
3300025922\|Ga0207646_10055542	All Organisms → cellular organisms → Bacteria → Acidobacteria	3540	Open in IMG/M
3300025929\|Ga0207664_10847225	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300026285\|Ga0209438_1145041	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300026317\|Ga0209154_1309764	Not Available	519	Open in IMG/M
3300026318\|Ga0209471_1327321	Not Available	508	Open in IMG/M
3300026320\|Ga0209131_1003833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9949	Open in IMG/M
3300026328\|Ga0209802_1023131	All Organisms → cellular organisms → Bacteria → Proteobacteria	3379	Open in IMG/M
3300026342\|Ga0209057_1061738	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300026538\|Ga0209056_10718449	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300026552\|Ga0209577_10022155	All Organisms → cellular organisms → Bacteria	5610	Open in IMG/M
3300026845\|Ga0207760_101737	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300026959\|Ga0207852_1001007	All Organisms → cellular organisms → Bacteria	3420	Open in IMG/M
3300027765\|Ga0209073_10002419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4118	Open in IMG/M
3300027775\|Ga0209177_10315555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	600	Open in IMG/M
3300027884\|Ga0209275_10336541	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300027889\|Ga0209380_10007509	All Organisms → cellular organisms → Bacteria	6480	Open in IMG/M
3300028906\|Ga0308309_10100860	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300029636\|Ga0222749_10711465	Not Available	550	Open in IMG/M
3300031545\|Ga0318541_10007785	All Organisms → cellular organisms → Bacteria	4667	Open in IMG/M
3300031708\|Ga0310686_103888057	All Organisms → cellular organisms → Bacteria	3857	Open in IMG/M
3300031719\|Ga0306917_10187858	Not Available	1558	Open in IMG/M
3300031744\|Ga0306918_10030929	All Organisms → cellular organisms → Bacteria	3381	Open in IMG/M
3300031744\|Ga0306918_10317098	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300031753\|Ga0307477_10172456	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300031823\|Ga0307478_10004003	All Organisms → cellular organisms → Bacteria	10653	Open in IMG/M
3300031823\|Ga0307478_10089277	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300031879\|Ga0306919_11047905	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031880\|Ga0318544_10106381	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300031894\|Ga0318522_10284724	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031910\|Ga0306923_10079707	All Organisms → cellular organisms → Bacteria	3668	Open in IMG/M
3300031941\|Ga0310912_10406362	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300031942\|Ga0310916_10084035	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300031945\|Ga0310913_11293535	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	506	Open in IMG/M
3300031946\|Ga0310910_11183844	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300031954\|Ga0306926_10354938	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300032035\|Ga0310911_10353603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300032044\|Ga0318558_10589160	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300032180\|Ga0307471_100000074	All Organisms → cellular organisms → Bacteria	44736	Open in IMG/M
3300032180\|Ga0307471_100154453	All Organisms → cellular organisms → Bacteria	2215	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.36%
Host-Associated	Host-Associated	3.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.33%
Plants	Host-Associated → Plants	3.64%
Aquatic	Environmental → Aquatic	3.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.73%
Freshwater	Environmental → Aquatic → Freshwater	3.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.21%
Cave	Environmental → Terrestrial → Cave	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.58%
Loam	Environmental → Terrestrial → Soil → Loam	12.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.21%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.21%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.03%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.21%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.61%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03669450	2088090014	Soil	MCPFCMASIGMIVASATSAGGLTALALKLSRKKKLGQEVTPNSSESSSQVKRLMPGPKA
MBSR1b_0754.00006850	2162886012	Miscanthus Rhizosphere	MGLIVASATSAGGLTALAVKLSRKKNNSKEIPNLKERSKQDVNSSIR
JGI25613J43889_100097182	3300002907	Grasslands Soil	MCPFCLASMGLIVASATSAGGLTVLAVKLSRKKSDKKESPNSNERSNQDVNANSR*
Ga0062389_1001044762	3300004092	Bog Forest Soil	MCPFCLASMGLIVVSATSAGGLTALAVKLGRKKSNAKEIPNPNERSNQNVNPNSR*
Ga0066395_100172752	3300004633	Tropical Forest Soil	MCPFCLAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEISDPNSNERSNENVEENS*
Ga0066395_106487541	3300004633	Tropical Forest Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIERSNEDVRENR*
Ga0066672_103738072	3300005167	Soil	MCPFCMAAIGQIVAGVVSVGGLTAVAVKLSRKKTNAKEIPNPISIERSNENESSNENVNQNSR*
Ga0066683_109003161	3300005172	Soil	MCPVCLASVGMIVAGVTSAGGLTALAVKLSRKKNDVKENPSSNERSNEDVNQNSR*
Ga0066680_101462083	3300005174	Soil	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVSPNSSESSSQVKRLMPGPKA*
Ga0066679_110388451	3300005176	Soil	MCPVCLASVGMIVAGVTSAGGLTALAVKLSRRKNDVREIPNSNERSNKDVNQNSR*
Ga0066688_100479051	3300005178	Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKTNAKEIPNPNSIE
Ga0066685_101208042	3300005180	Soil	MCPFCLASMGLIVAGATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSR*
Ga0066678_102997082	3300005181	Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKTNAKEIPNPNSIERSKENVN*
Ga0066676_103683872	3300005186	Soil	MCPFCLASMGLIVASATSAGGLAALAVKLSRKKDNAKEIIPNSGERSTQNVN
Ga0065715_109420651	3300005293	Miscanthus Rhizosphere	MCPFCLASMGLIVASATSAGGLTALAVKLSRKKNNSKEIPNLKERSKQDVNSSIR*
Ga0065707_104226952	3300005295	Switchgrass Rhizosphere	MCPFCMASIGMIVASATSAGGLTALALKLSRKKKLGQEVTPNSSESSSQVKRLMPGPKA*
Ga0066682_103792152	3300005450	Soil	MCPFCLATMGLIVASATSAGGLTALAVKLSRKRNKMKEIPNSNERSNQDVNPNSR*
Ga0066681_102635192	3300005451	Soil	VAGVTSAGGLTALAVKLSRKKNDVKENPSSNERSNEDVNQNSR*
Ga0070707_1000986224	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVTPNSSESSSQVNRLMPGPKA*
Ga0070698_1000214196	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MCPFCLASMGLIVAGATSAGGLTALAVKLSRKKKDAKEISNSKEGRNENVNLNSR*
Ga0070735_101933392	3300005534	Surface Soil	MCPVCLASMGMIVAGVTSAGGLTALAVKLSRKKDDAREIPNSNERSNEDGSKQKE*
Ga0070697_1000803953	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVSPNSIESSSQVKRLMPGPNA*
Ga0070686_1003121911	3300005544	Switchgrass Rhizosphere	RSRGDAMCPFCLASMGLIVASATSAGGLTALAVKLSRKKNNSKEIPNLKERSKQDVNSSIR*
Ga0070696_1000600774	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MGLIVASATSAGGLTALAVKLSRKKNNSKEIPNLKERSKQDVNSSIR*
Ga0066661_107038082	3300005554	Soil	MCPFCMAAIGQIVAGVVSVGGLTAVAVKLSRKKTNAKEIPNPISIER
Ga0066704_102763871	3300005557	Soil	MCPFCMAAIGQIAAGVVSAGGLTAVAVKLSRKKTNAKEIPNPNSIERSNENVHQNSR*
Ga0068855_1013469301	3300005563	Corn Rhizosphere	FATRSRGDAMCPFCLASMGLIVASATSAGGLTALAVKLSRKKNNSKEIPNLKERSKQDVNSSIR*
Ga0070761_100174556	3300005591	Soil	MCPFCIASMGLIVAGATSAGGLTALAVKLSRKKNNAGEITPNSYERSSQDVNPNSR*
Ga0070762_104433992	3300005602	Soil	MCPFCIAALGQVVAGVVSAGGLTALAVKLSRKKDNSNEIPNPHAIERSNQNESSS*
Ga0066903_1002652003	3300005764	Tropical Forest Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIKRSNEDVRENR*
Ga0066903_1019927832	3300005764	Tropical Forest Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKNNTKETPSSNSNERSKQDVKPNS*
Ga0070765_1001099484	3300006176	Soil	MCPFCLASMGLIVASTTSAGGLTILAVKLSRKKSDQKEIPNSNERSNQDVNPNSR*
Ga0079222_100715162	3300006755	Agricultural Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEIPNPDSIERSNENVSQNVR*
Ga0066659_100349402	3300006797	Soil	MCPFCLASMGLIVASVTSAGGLTALAVKLSRKKSNAKEIPNLNERGNQDANPNSR*
Ga0066659_108295802	3300006797	Soil	MCPFCMAAIGQIVAGVVSVGGLTAVAVKLSRKKSNAKEIPNPISIERSNENESSNENVNQNSR*
Ga0079221_100640252	3300006804	Agricultural Soil	MCPFCMVAIGQIVAGVVSAGGLTAVAVKLSLKKSNAKEIPNPNSIERSNENVSQNCR*
Ga0075425_10000100217	3300006854	Populus Rhizosphere	MCPFCMASIGMIVAGATSDGGLTALAVKLSRKKKLGREVTPNSTERSSQVKRLMPSPKA*
Ga0075425_1001893112	3300006854	Populus Rhizosphere	MCPFCMASIGMIVAGATSARGLTALAVKLSRKKKLGQEVTPNSGESSSQVNRLMPGPKAEVHRCS*
Ga0099793_100790692	3300007258	Vadose Zone Soil	MGLIVAGATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSR*
Ga0066710_1001586072	3300009012	Grasslands Soil	MCPFCMAAIGQIVAGVVSVGGLTAVAVKLSRKKTNAKEIPNPNSIERSKENVN
Ga0066709_1002414342	3300009137	Grasslands Soil	MIVASATSAGGLTALAVKLSRKKSKVKEIPNPYERSNQDVNPNSR*
Ga0066709_1002455823	3300009137	Grasslands Soil	MIVAGVTSAGGLTALAVKLSRKKNDVKENPSSNERSNEDVNQNSR*
Ga0066709_1020826252	3300009137	Grasslands Soil	MGLIVASATSAGGLTVLAVKLSRKKNNAKKFQIRMKGAIQDVNPNRR*
Ga0066709_1022060372	3300009137	Grasslands Soil	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVSPNSSESSLQVKRLMPGSKA*
Ga0066709_1023540341	3300009137	Grasslands Soil	MAAIGQIVAGVVSVGGLTAVAVKLSRKKTNAKEIPNPISIERSNENESSNENVNQNSR*
Ga0066709_1038974732	3300009137	Grasslands Soil	MGLIVASATSAGGLAALAVKLSRKKDNAKEIIPNSGERSTQNVNSNNR*
Ga0126373_100381034	3300010048	Tropical Forest Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKNNAKQILNLNAMERRNQNESSSQDVNPHSR*
Ga0126373_100734073	3300010048	Tropical Forest Soil	MAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIERSNEDVRENR*
Ga0126373_101898662	3300010048	Tropical Forest Soil	MCPFCLAAIGQIVAGVVSAGGQTAVAVKLSRKKNNAKEISDPNSNERSNENVEENS*
Ga0134086_102835642	3300010323	Grasslands Soil	MGLIVAGATSAGGLTALAVKLSRKKNNVKEIPNSDERSSQDVNSNSR*
Ga0134063_101074792	3300010335	Grasslands Soil	MAAIGQIVAGVVSAGGLTAVAVKLSRKKTNAKEIPNPNSIERSKENVN*
Ga0134071_100689392	3300010336	Grasslands Soil	MGLIVASATSAGGLAALAVKLSRKKDNAKEIIPNSGERSTQNVNTNNR*
Ga0126370_1000191312	3300010358	Tropical Forest Soil	MCPFCIAAIGQIVAAGVVSAGGLTAVAVKLSRKKYEAKEIPSAKPIERSNENVEHNS*
Ga0126370_100644964	3300010358	Tropical Forest Soil	FATWEVKTMCPFCLAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEISDPNSNERSNENVEENS*
Ga0126370_103281261	3300010358	Tropical Forest Soil	MAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISI
Ga0126370_105988522	3300010358	Tropical Forest Soil	CMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIKRSNEDVRENR*
Ga0126370_124309452	3300010358	Tropical Forest Soil	CMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIERSNEDVKENS*
Ga0126376_108495942	3300010359	Tropical Forest Soil	MGLIVASATSAGGLTALAMKLSGKKGDAKEIPSSDSSERSN*
Ga0126372_120974532	3300010360	Tropical Forest Soil	MAAIGQIVAGVVSAGGLTAVAVKLSRKKSSAKEILSSDSNERSNED
Ga0126378_104406073	3300010361	Tropical Forest Soil	RSFATWEVKTMCPFCLAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEISDPNSNERSNENVEENS*
Ga0126378_113654421	3300010361	Tropical Forest Soil	FCLAAIGQVVAGVVSAGGLTAVAVKLSRKKDNAKVIPSSNSNERSNENVEENS*
Ga0126378_123869861	3300010361	Tropical Forest Soil	KGDAMCPFCLANIGLIVAGATSAGGLTALAVKLSRKKDNPKEIPNPKSIERSKSE*
Ga0126378_133133301	3300010361	Tropical Forest Soil	KKLRHREVKTMCPFCMAAIGQIVAGVVSAGGMTAVAVNLSRKKNNAKEIPNPESIERSNENVEENNR*
Ga0126379_135568052	3300010366	Tropical Forest Soil	MCPFCLASIGLIVAGATSAGGLTALAVKLSRKKDSPKEIQPKSIERSKQNE
Ga0126379_137253751	3300010366	Tropical Forest Soil	AANKLRHREVKTMCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIERSNEDVKENS*
Ga0126381_1000067118	3300010376	Tropical Forest Soil	MAAIGQIVAGVVSAGGLTAVAVKLSRKKSSAKEILSSDSNERSNEDVEENSR*
Ga0126381_1004881613	3300010376	Tropical Forest Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKSNAKEIPNPNSIERSNRNVLQKSR*
Ga0126381_1007246212	3300010376	Tropical Forest Soil	MCPFCLAAIGQIVAGVVSAGGLTAMAVKLSLKKNNAKEISDPNSNERSNENVEENS*
Ga0136449_1026899071	3300010379	Peatlands Soil	MCPVCLASMGMIVAGVTSAGGLTALAVKLSLKRKDAREIASSNSNERSNEDVNQNSR*
Ga0136449_1045518162	3300010379	Peatlands Soil	MIVASTTSAGGLTALAVKLSRKKNNVKVFPKSNERSSQSVNPNS
Ga0124850_10718621	3300010863	Tropical Forest Soil	RSFATGRQNASPPGGKTMCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIKRSNEDVRENR*
Ga0137383_100355211	3300012199	Vadose Zone Soil	MAAIGQIAVGVVSAGGLTAVAVKLSRKKTNAKEIPNPN
Ga0137382_103790662	3300012200	Vadose Zone Soil	VGMIVAGVTSAGGLTALAVKLSRKKNDASEIPNSSERSNEDVNQNIR*
Ga0137363_100529352	3300012202	Vadose Zone Soil	MGLIVASATSAGGLTVLAVKLSRKKTDKKEIPNSNESSNQDVNPNSR*
Ga0137362_117425541	3300012205	Vadose Zone Soil	MGLIVASATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSR*
Ga0137381_113804442	3300012207	Vadose Zone Soil	MAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAKEIPNPNSIERSNENVSQNVR*
Ga0137376_112802872	3300012208	Vadose Zone Soil	MAAIGQIAAGVVSAGGLTAVAVKLSRKKTNAKEIPNPISIERSNENESSNENVHQNSR*
Ga0137378_111377581	3300012210	Vadose Zone Soil	MGMIVASATSAGGLTVLAVKLSRKKTDNKEIPNSNERSNQNVNQNSR*
Ga0137377_115743371	3300012211	Vadose Zone Soil	MAAIGQIAVGVVSAGGLTAVAVKLSRKKTNAKEIPNPNSIERSNEN
Ga0137372_102684942	3300012350	Vadose Zone Soil	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVTPNSSESSSQVKRLMPGPKA*
Ga0137385_104772472	3300012359	Vadose Zone Soil	MGMIVASATSAGGLTVLAVKLSRKKSDKKEIPNSNERSNQNVNENSR*
Ga0137360_115915541	3300012361	Vadose Zone Soil	MGLIVAGVASTGGLAALAVKVSRKKNDANEIQLNSDEKRNDYEAK*
Ga0137373_112419862	3300012532	Vadose Zone Soil	MGLIVASATSVGGLAALAVKLSRKKDNAKEIIPNSGERSTQNVNTNNR*
Ga0137396_100614793	3300012918	Vadose Zone Soil	MGLIVAGATSAGGLTALAVKLSRKKNNAKEITPNSYERSSQDVNPNSR*
Ga0137419_109989072	3300012925	Vadose Zone Soil	SRFATRWRGDAMCPFCLASMGLIVASATSAGGLTVLAVKLARKKSHKKEIPNSNERSNHDVNPNSR*
Ga0137416_101191031	3300012927	Vadose Zone Soil	MGLIVASATSAGGLTVLAVKLARKKSHKKEIPNSNERSNHDVNPNSR*
Ga0126375_108897451	3300012948	Tropical Forest Soil	MCPFCLAAIGQIVAGVVSAGGLTAVAVKLSLKKNNAKEISDPNSNERSNENVEENS*
Ga0134077_103545232	3300012972	Grasslands Soil	GLIVADATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSR*
Ga0134072_100828391	3300015357	Grasslands Soil	MGLIVAGGTSAGGLTVLAVKLSRKKNNAKEIPSSNSNERSNEN
Ga0182036_104413752	3300016270	Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKNNAKEIPNPNSIERSYQNVVQNSR
Ga0182034_102579773	3300016371	Soil	MALIATGATSAGGLTVLAMKLSRKKNNPGEIVSSNSIERCNEDAQQNSR
Ga0182040_105593291	3300016387	Soil	MCPFCLASMGLIVAGATSAGGLTALAVRLSRKKNNAKEIHSPNSNEGSNENEGGSKDVNQ
Ga0182037_100461362	3300016404	Soil	MCPFCMAAIAQIVAGAVSAGSLTAFTVKLSRKKDNPREIVSSNSIERSNEDAQQNSR
Ga0182037_116425111	3300016404	Soil	CPFCLASMGLIVAGATSAGGLTALAVKLSRKKNNAKEIHSPNSNEGSNENEGGSKDVNQK
Ga0134112_104959191	3300017656	Grasslands Soil	MCPFCLASMGLIVAGATSAGGLTALAVKLSRKKDNAREIPSSSSNERSNEN
Ga0187824_100087504	3300017927	Freshwater Sediment	MCPVCLASMGMIVAGVTSAGGLTALAVKLSRKKDDAREIPNSNERSNEDGSKQKE
Ga0187824_100137502	3300017927	Freshwater Sediment	MCPVCLASVGWIVAGAATSAGGLTALAVKLSRKKTSAREIPNSNKERSIENVYANSR
Ga0187848_104315892	3300017935	Peatland	SGHASPPEPRGDAMCPFCLASMGLIVASATSAGGLAVLAVKLSRKKNGVKEIPNSNSNERSNEDVNQNSR
Ga0187821_102797891	3300017936	Freshwater Sediment	FAGATSAGGLTVLAVKLSRKKNDAKEIPNSNERNIQNVYANSR
Ga0187780_100487901	3300017973	Tropical Peatland	MCPFCLSTIGLVVANAVTTGGLTALVVKVSRKKSDVKEITPKSNERKMPTQR
Ga0187766_106684091	3300018058	Tropical Peatland	MCPFCLATMGMIVASATSAGSLTVLAAKWSRKKDQGKKVPNSNDSKERSNPDVNQNSQ
Ga0187784_103200312	3300018062	Tropical Peatland	MCPFCLASIGLIAVKAASAGGLTALAVKLSRKKKDVREIPNSNKRSNENANQNSR
Ga0187771_105414552	3300018088	Tropical Peatland	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKGNAKEIPNSNEWRNQNESSR
Ga0187770_100096415	3300018090	Tropical Peatland	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKGNAKEIPNSNEWRNQNESSRQDVNQNS
Ga0179594_100773703	3300020170	Vadose Zone Soil	ASMGLIVASVTSAGGLTALAVKLSRKKINAKEIPNLNERSNQDVNPNSR
Ga0179592_100020786	3300020199	Vadose Zone Soil	MCPFCLASMGLIVASATSAGGLTVLAVKLSRKKRDKKESPNSNERSNQDVNADSR
Ga0210407_103787622	3300020579	Soil	MGLIVAGATSAGGLTALAVKLSRKKDNAKEIIPNAGERSSQDDVLAPPS
Ga0210407_110235711	3300020579	Soil	MCPFCLACMGLIVASATSAGGLTALAVKLSRKKNNAKEIIRNSNERSNSNERSGQ
Ga0210403_111957951	3300020580	Soil	MGLIVAGATSAGGLTALAVKLSRKKDNAKEIIPNAGERTSQDDVLAPRS
Ga0210395_100000887	3300020582	Soil	MCPFCLASMGLIVVSATSAGGLTALAVKLGRKKSNAREIPKPKERSNQNVNPNSR
Ga0210395_100136793	3300020582	Soil	MCPFCIASMGLIIAGATSAGGLTALAVKLSRKKNNAREITPNSYERSSQDVNPNSR
Ga0215015_110644511	3300021046	Soil	MCPVCLASVGMIVAGVTSAGGLTALAVKLSRKKNDAGESIPNSNERSGAELNTHR
Ga0210406_1000007587	3300021168	Soil	MCPFCLASMGLIVASATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSQ
Ga0210400_100625525	3300021170	Soil	MCPFCLATMGLIVAGATSAGGLTALAVKLSRKKDNAKEIIPNAGERSSQDDVLAPPS
Ga0210405_107337962	3300021171	Soil	MCPVCLASVGMIVAGVTSAGGLTALAVKLSRKKSDVREIPNSNERSNEDVNQNS
Ga0210394_100150904	3300021420	Soil	MCPVCLASMGLMIAGAATSAGGLTALAVKLSRKKTNAKEIPNSNERSNQNVYANSR
Ga0210394_105051851	3300021420	Soil	MGLILAGATSAGGLTALAVKLSRTKNNARAIPNPNERSTQNVNP
Ga0187846_100121774	3300021476	Biofilm	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKNSAKEIPNPNSNSSQRSNEDVEQKS
Ga0126371_100072608	3300021560	Tropical Forest Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKSNAKQIPNLNANERRNQNESSSQDVNPHSR
Ga0126371_100073093	3300021560	Tropical Forest Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKSNAEEIPNPISIKRSNEDVRENR
Ga0126371_100124322	3300021560	Tropical Forest Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKSSAKEILSSDSNERSNEDVEENSR
Ga0126371_1002050110	3300021560	Tropical Forest Soil	VCPLCVESMGLLVASATSAGGLTARAVKLTRKKNNAKEVSSSNSIERSNENESSNEGVHQNG
Ga0126371_113760291	3300021560	Tropical Forest Soil	KKLRHREVKTMCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEISDPNSNERSNENVEENS
Ga0126371_118035281	3300021560	Tropical Forest Soil	MCPFCIAAIGQIVAAGVVSAGGLTAVAVKLSRKKNDANEIPSVNSIERSNENVEQNS
Ga0137417_14578302	3300024330	Vadose Zone Soil	MGLIVAGATSAGGLTALAVKLSRKKSNAKEIPNPNERSNQDVNPNSR
Ga0207642_109781032	3300025899	Miscanthus Rhizosphere	MCPFCLASMGLIVASATSAGGLTALAVKLSRKKNNSKEIPNLKERSKQDVNSSIR
Ga0207646_100555425	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVTPNSSESSSQVNRLMPGPKA
Ga0207664_108472252	3300025929	Agricultural Soil	MCPFCLACTGLIVASATSAGGLTALAVKLSRKKNNAKEIIRNSNERSKFQ
Ga0209438_11450411	3300026285	Grasslands Soil	MCPFCLASMGLIVASATSAGGLTVLAVKLPRKKRDKKESPNSNERSNQDVN
Ga0209154_13097641	3300026317	Soil	MCPFCMAAIGQIVAGVVSVGGLTAVAVKLSRKKTNAKEIPNPISIERSNENESSNENVNQNSR
Ga0209471_13273212	3300026318	Soil	MCPVCLASVGMIVAGVTSAGGLTALAVKLSRRKNDVREIPNSNERSNKDVNQNSR
Ga0209131_10038334	3300026320	Grasslands Soil	MCPFCLASMGLIVASATSAGGLTVLAVKLSRKKSDKKESPNSNERSNQDVNANSR
Ga0209802_10231313	3300026328	Soil	MCPFCMASIGMIVAGATSAGGLTALAVKLSRKKKLGQEVSPNSSESSSQVKRLMPGPKA
Ga0209057_10617382	3300026342	Soil	MCPVCLASVGMIVAGVTSAGGLTALAVKLSRKKNDVKENPSSNERSNEDVNQNSR
Ga0209056_107184491	3300026538	Soil	MGLIVASATSAGGLAALAVKLSRKKDNAKEIIPNSGERSTQNVNSNNR
Ga0209577_100221558	3300026552	Soil	MCPFCLASMGLIVASATSAGGLTALAVKLSRKKSSAKEIRNPDVRSNEDVNSNSR
Ga0207760_1017371	3300026845	Tropical Forest Soil	PFCMTAMAQIVAGAVSAGCLTALAVKLSRKKNNTREILSSNSIDRSNEDAQQNSR
Ga0207852_10010075	3300026959	Tropical Forest Soil	MCPFCMTAMAQIVAGAVSAGCLTALAVKLSRKKNNTREILSSNSIERSNEDAQQNSR
Ga0209073_100024193	3300027765	Agricultural Soil	MCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEIPNPDSIERSNENVSQNVR
Ga0209177_103155551	3300027775	Agricultural Soil	LAVKKLRHPGGKTMCPFCMAAIGQIVAGVVSAGGLTAVAVKLSRKKNNAKEIPNPDSIERSNENVSQNVR
Ga0209275_103365411	3300027884	Soil	MCPFCIAALGQVVAGVVSAGGLTALAVKLSRKKDNSNEIPNPHAIERSNQNESSS
Ga0209380_100075097	3300027889	Soil	MCPFCLASMGLIVVSATSAGGLTALAVKLGRKKSNAREIPNPKERSNQNVNPNSR
Ga0308309_101008601	3300028906	Soil	MCPFCLASMGLIVASTTSAGGLTILAVKLSRKKSDQKEIPNSNERSNQDVNPNSR
Ga0222749_107114651	3300029636	Soil	MCPFCLATMGLIVAGATSAGGLTALAVKLSRKKDNVKEVIPNAGERSSQDDVLAPPS
Ga0318541_100077855	3300031545	Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKNNAKEIPNPNSIERSNQNVVQKSR
Ga0310686_1038880576	3300031708	Soil	MCPFCLASMGLIVAGATSAGGLTALAVKLSLKRNNVKEVTLNTNDRKSRVASEPLAATED
Ga0306917_101878584	3300031719	Soil	MCPFCLASMGLIVAGATSAGGLTALAVKLSRKKNNAKEIHSPNSNEGSNENEGGSKDVNQ
Ga0306918_100309292	3300031744	Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKNNAKEIPNPNSIERSDQNVVQKSR
Ga0306918_103170981	3300031744	Soil	MCPFCMATFAQIVAGAVSAGSLTALTVKLSRKKNNPGEIVSSNSIERCNEDAQQNS
Ga0307477_101724562	3300031753	Hardwood Forest Soil	MCPVCLASVGIIVAGAVSTGGLAALAVKVSRKKNDAKEIIPTSNERSGKNVNEHD
Ga0307478_100040036	3300031823	Hardwood Forest Soil	MCPFCLASMGLIVASATSAGGLTALAVKLSRKKSSAKEVPSPKERSSQNDNSNSR
Ga0307478_100892772	3300031823	Hardwood Forest Soil	MCPVCLASVGIIVAGAVSTGGLAALAVKVSRKKNDGREIIPTSNERSGKNVNEHD
Ga0306919_110479052	3300031879	Soil	MCPFCMATFAQIVAGAVSAGSLTALTVKLSRKKDNPREMVSSNSIERSNEDAQQNSR
Ga0318544_101063813	3300031880	Soil	STIGLVVASTVSTGGLTALAVKLSRKKNNAKEIPNPNSIERSNQNVVQKSR
Ga0318522_102847241	3300031894	Soil	ISGHAPPPELRGDAMCPFCLASMGLIVAGATSAGGLTALAVKLSRKKNNAKEIPNPNSIERSDQNVVQKSR
Ga0306923_100797073	3300031910	Soil	MCPFCMATFAQIVAGAVSAGSLTALTVKLSRKKDNPREIVSSNSIERSNEDAQQNSR
Ga0310912_104063621	3300031941	Soil	MCPFCMATFAQIVAGAVSAGSLTALTVKLSRKKNNPGEIVSSNSIERCNE
Ga0310916_100840353	3300031942	Soil	MCPFCMAAIAQIVAGAVSAGSLTALTVKLSRKKDNPREIVSSNSIERSNEDAQQNSR
Ga0310913_112935352	3300031945	Soil	PVREVNAMCPFCLASMGLIVAGATSAGGLTALAVKLSRKKNNAKEIHSPNSNEGSNENEGGSKDVNQK
Ga0310910_111838442	3300031946	Soil	TMCPFCMAAIAQIVAGAVSAGSLTALTVKLSRKKDNPREIVSSNSIERSNEDAQQNSR
Ga0306926_103549382	3300031954	Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKNNAKQIPNLNAMERRNQNESSSQDVNPHSR
Ga0310911_103536031	3300032035	Soil	MCPFCLSTIGLVVASTVSTGGLTALAVKLSRKKNNAKEIPNPNSIERSNQNVVQK
Ga0318558_105891602	3300032044	Soil	MCPFCMATFAQIVAGAVSAGSLTALTVKLSRKKNNPGEIVSSNSIERCNEDAQQNSR
Ga0307471_10000007413	3300032180	Hardwood Forest Soil	MCPFCVAAIGQIVAGVVSAGGLTALAVKLSRKKSNAKEIPNPNSNERSNQNVSQNIR
Ga0307471_1001544531	3300032180	Hardwood Forest Soil	MGLIVASATSAGGLTALAVKLSRKKSSAKEVPSPKERSSQND

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038763

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences