Metagenome Family F038825

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F038825
Family Type	Metagenome
Number of Sequences	165
Average Sequence Length	63 residues
Representative Sequence	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTREPDPATYSYDARNRRWVLKEGVR
Number of Associated Samples	101
Number of Associated Scaffolds	165

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.42 %
% of genes near scaffold ends (potentially truncated)	38.79 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.394 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.455 % of family members)
Environment Ontology (ENVO)	Unclassified (45.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.53% β-sheet: 11.83% Coil/Unstructured: 80.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 165 Family Scaffolds
PF00226	DnaJ	2.42
PF00239	Resolvase	1.21
PF12844	HTH_19	0.61
PF01321	Creatinase_N	0.61
PF12071	DUF3551	0.61
PF13433	Peripla_BP_5	0.61
PF01694	Rhomboid	0.61
PF00872	Transposase_mut	0.61
PF07366	SnoaL	0.61
PF06835	LptC	0.61
PF03779	SPW	0.61

COG ID	Name	Functional Category	% Frequency in 165 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.21
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.21
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	0.61
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.61
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.39 %
All Organisms	root	All Organisms	40.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.39 %
cellular organisms	root	All Organisms → cellular organisms	40.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.55 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.39 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.52 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.39 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	29.70 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.61 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.39 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	18.79 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.61 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.39 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	7.88 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	1.82 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.21 %
Microvirga lenta	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lenta	0.61 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.39 %
Bradyrhizobium sp. SRL28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	3.03 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	1.82 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	1.82 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1.21 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	1.21 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.21 %
Bradyrhizobium sp. 1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 1	0.61 %
Microvirga lenta	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lenta	0.61 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01DQ2WZ	Not Available	514	Open in IMG/M
3300001867\|JGI12627J18819_10009695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3762	Open in IMG/M
3300001867\|JGI12627J18819_10012340	All Organisms → cellular organisms → Bacteria → Proteobacteria	3390	Open in IMG/M
3300005332\|Ga0066388_102043927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1029	Open in IMG/M
3300005332\|Ga0066388_103519700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	799	Open in IMG/M
3300005347\|Ga0070668_100582897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	977	Open in IMG/M
3300005355\|Ga0070671_101817223	Not Available	542	Open in IMG/M
3300005437\|Ga0070710_10397924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	922	Open in IMG/M
3300005437\|Ga0070710_10863409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	651	Open in IMG/M
3300005536\|Ga0070697_101260673	Not Available	659	Open in IMG/M
3300005547\|Ga0070693_100761258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	714	Open in IMG/M
3300005764\|Ga0066903_100211778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2920	Open in IMG/M
3300005764\|Ga0066903_104150143	Not Available	775	Open in IMG/M
3300005764\|Ga0066903_106141479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	628	Open in IMG/M
3300005764\|Ga0066903_108469335	Not Available	524	Open in IMG/M
3300006173\|Ga0070716_100228078	Not Available	1255	Open in IMG/M
3300006173\|Ga0070716_101134968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	625	Open in IMG/M
3300006173\|Ga0070716_101309230	Not Available	586	Open in IMG/M
3300006175\|Ga0070712_100606995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	926	Open in IMG/M
3300006881\|Ga0068865_101011957	Not Available	728	Open in IMG/M
3300009792\|Ga0126374_10809511	Not Available	717	Open in IMG/M
3300010043\|Ga0126380_12215193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 1	508	Open in IMG/M
3300010046\|Ga0126384_11106803	Not Available	726	Open in IMG/M
3300010047\|Ga0126382_11400289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	638	Open in IMG/M
3300010048\|Ga0126373_11040461	Not Available	884	Open in IMG/M
3300010048\|Ga0126373_11588154	Not Available	719	Open in IMG/M
3300010048\|Ga0126373_11829592	Not Available	671	Open in IMG/M
3300010048\|Ga0126373_13092406	Not Available	518	Open in IMG/M
3300010358\|Ga0126370_10182224	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300010359\|Ga0126376_10498459	Not Available	1127	Open in IMG/M
3300010359\|Ga0126376_10882464	Not Available	882	Open in IMG/M
3300010359\|Ga0126376_12481998	Not Available	566	Open in IMG/M
3300010360\|Ga0126372_12892407	Not Available	532	Open in IMG/M
3300010361\|Ga0126378_10888205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	998	Open in IMG/M
3300010361\|Ga0126378_13245376	Not Available	517	Open in IMG/M
3300010366\|Ga0126379_10077804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2858	Open in IMG/M
3300010366\|Ga0126379_10429943	Not Available	1376	Open in IMG/M
3300010366\|Ga0126379_12094834	Not Available	668	Open in IMG/M
3300010376\|Ga0126381_100351039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2039	Open in IMG/M
3300010376\|Ga0126381_101295352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1053	Open in IMG/M
3300010376\|Ga0126381_101535614	Not Available	962	Open in IMG/M
3300010376\|Ga0126381_101844814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	872	Open in IMG/M
3300010376\|Ga0126381_102780298	Not Available	699	Open in IMG/M
3300010376\|Ga0126381_102856431	Not Available	688	Open in IMG/M
3300010376\|Ga0126381_104177315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	560	Open in IMG/M
3300010376\|Ga0126381_104718923	Not Available	525	Open in IMG/M
3300010376\|Ga0126381_104810219	Not Available	519	Open in IMG/M
3300010398\|Ga0126383_10305851	Not Available	1590	Open in IMG/M
3300010398\|Ga0126383_10844825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1000	Open in IMG/M
3300010398\|Ga0126383_11258511	Not Available	830	Open in IMG/M
3300010399\|Ga0134127_10908529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	936	Open in IMG/M
3300012177\|Ga0153943_1107125	Not Available	598	Open in IMG/M
3300012198\|Ga0137364_10385536	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300012356\|Ga0137371_10089631	All Organisms → cellular organisms → Bacteria	2390	Open in IMG/M
3300012958\|Ga0164299_10632266	Not Available	737	Open in IMG/M
3300012971\|Ga0126369_10190990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1966	Open in IMG/M
3300012971\|Ga0126369_11639901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	733	Open in IMG/M
3300012971\|Ga0126369_12963126	Not Available	556	Open in IMG/M
3300012988\|Ga0164306_10843998	Not Available	741	Open in IMG/M
3300012989\|Ga0164305_11911823	Not Available	539	Open in IMG/M
3300016270\|Ga0182036_10501973	Not Available	961	Open in IMG/M
3300016294\|Ga0182041_10965575	Not Available	769	Open in IMG/M
3300016294\|Ga0182041_11113162	Not Available	718	Open in IMG/M
3300016319\|Ga0182033_10540056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1006	Open in IMG/M
3300016341\|Ga0182035_10093096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2187	Open in IMG/M
3300016341\|Ga0182035_10404601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1148	Open in IMG/M
3300016341\|Ga0182035_11234333	Not Available	668	Open in IMG/M
3300016357\|Ga0182032_11066538	Not Available	692	Open in IMG/M
3300016371\|Ga0182034_10125896	All Organisms → cellular organisms → Bacteria	1885	Open in IMG/M
3300016371\|Ga0182034_12065817	Not Available	503	Open in IMG/M
3300016387\|Ga0182040_11869287	Not Available	515	Open in IMG/M
3300016387\|Ga0182040_11905180	Not Available	510	Open in IMG/M
3300016404\|Ga0182037_11854170	Not Available	539	Open in IMG/M
3300016422\|Ga0182039_11760313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	567	Open in IMG/M
3300016422\|Ga0182039_12034177	Not Available	529	Open in IMG/M
3300017792\|Ga0163161_10940114	Not Available	735	Open in IMG/M
3300020579\|Ga0210407_10014935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lenta	5773	Open in IMG/M
3300020580\|Ga0210403_10425418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1083	Open in IMG/M
3300020581\|Ga0210399_11463145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	531	Open in IMG/M
3300021170\|Ga0210400_11386269	Not Available	561	Open in IMG/M
3300021406\|Ga0210386_11333083	Not Available	603	Open in IMG/M
3300021560\|Ga0126371_11540735	Not Available	792	Open in IMG/M
3300025899\|Ga0207642_10419770	Not Available	804	Open in IMG/M
3300025915\|Ga0207693_10128433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1993	Open in IMG/M
3300025916\|Ga0207663_11513841	Not Available	540	Open in IMG/M
3300025939\|Ga0207665_10891745	Not Available	705	Open in IMG/M
3300025961\|Ga0207712_11660196	Not Available	573	Open in IMG/M
3300027034\|Ga0209730_1046694	Not Available	508	Open in IMG/M
3300027070\|Ga0208365_1018380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	892	Open in IMG/M
3300027266\|Ga0209215_1022275	Not Available	824	Open in IMG/M
3300027326\|Ga0209731_1005169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	1608	Open in IMG/M
3300027371\|Ga0209418_1019416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1133	Open in IMG/M
3300031543\|Ga0318516_10308956	Not Available	914	Open in IMG/M
3300031543\|Ga0318516_10660754	Not Available	595	Open in IMG/M
3300031546\|Ga0318538_10194872	Not Available	1081	Open in IMG/M
3300031561\|Ga0318528_10454251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	688	Open in IMG/M
3300031572\|Ga0318515_10424012	Not Available	712	Open in IMG/M
3300031573\|Ga0310915_10816205	Not Available	656	Open in IMG/M
3300031573\|Ga0310915_10931084	Not Available	608	Open in IMG/M
3300031668\|Ga0318542_10457588	Not Available	662	Open in IMG/M
3300031679\|Ga0318561_10689162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	562	Open in IMG/M
3300031680\|Ga0318574_10294969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	942	Open in IMG/M
3300031681\|Ga0318572_10294243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	959	Open in IMG/M
3300031715\|Ga0307476_10605501	Not Available	812	Open in IMG/M
3300031715\|Ga0307476_10716596	Not Available	741	Open in IMG/M
3300031718\|Ga0307474_10000329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	35004	Open in IMG/M
3300031718\|Ga0307474_10005652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9017	Open in IMG/M
3300031718\|Ga0307474_11292940	Not Available	576	Open in IMG/M
3300031736\|Ga0318501_10443413	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031740\|Ga0307468_100340390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1113	Open in IMG/M
3300031744\|Ga0306918_10147093	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1736	Open in IMG/M
3300031744\|Ga0306918_10413406	Not Available	1052	Open in IMG/M
3300031744\|Ga0306918_10750169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	763	Open in IMG/M
3300031744\|Ga0306918_11013990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300031753\|Ga0307477_10683584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	687	Open in IMG/M
3300031770\|Ga0318521_10663522	Not Available	632	Open in IMG/M
3300031771\|Ga0318546_10909907	Not Available	619	Open in IMG/M
3300031782\|Ga0318552_10390124	Not Available	710	Open in IMG/M
3300031805\|Ga0318497_10558659	Not Available	642	Open in IMG/M
3300031823\|Ga0307478_10012125	All Organisms → cellular organisms → Bacteria	5949	Open in IMG/M
3300031833\|Ga0310917_10156535	All Organisms → cellular organisms → Bacteria → Proteobacteria	1507	Open in IMG/M
3300031879\|Ga0306919_10207578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1459	Open in IMG/M
3300031879\|Ga0306919_10509326	Not Available	928	Open in IMG/M
3300031879\|Ga0306919_10702845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	779	Open in IMG/M
3300031880\|Ga0318544_10416677	Not Available	522	Open in IMG/M
3300031890\|Ga0306925_10427723	All Organisms → cellular organisms → Bacteria → Proteobacteria	1417	Open in IMG/M
3300031890\|Ga0306925_10686392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1073	Open in IMG/M
3300031890\|Ga0306925_11087015	Not Available	809	Open in IMG/M
3300031893\|Ga0318536_10668424	Not Available	518	Open in IMG/M
3300031910\|Ga0306923_10813450	Not Available	1031	Open in IMG/M
3300031910\|Ga0306923_11795991	Not Available	630	Open in IMG/M
3300031910\|Ga0306923_12066503	Not Available	576	Open in IMG/M
3300031910\|Ga0306923_12073931	Not Available	575	Open in IMG/M
3300031910\|Ga0306923_12420743	Not Available	520	Open in IMG/M
3300031910\|Ga0306923_12546704	Not Available	503	Open in IMG/M
3300031912\|Ga0306921_10230391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	2171	Open in IMG/M
3300031912\|Ga0306921_11742430	Not Available	672	Open in IMG/M
3300031912\|Ga0306921_12601452	Not Available	523	Open in IMG/M
3300031941\|Ga0310912_10536209	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300031942\|Ga0310916_10126666	All Organisms → cellular organisms → Bacteria → Proteobacteria	2084	Open in IMG/M
3300031942\|Ga0310916_10963585	Not Available	713	Open in IMG/M
3300031942\|Ga0310916_11708848	Not Available	509	Open in IMG/M
3300031947\|Ga0310909_10536554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	980	Open in IMG/M
3300031947\|Ga0310909_11558763	Not Available	525	Open in IMG/M
3300031954\|Ga0306926_11790225	Not Available	698	Open in IMG/M
3300031954\|Ga0306926_12333998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	592	Open in IMG/M
3300031962\|Ga0307479_10500727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	1198	Open in IMG/M
3300031962\|Ga0307479_11480060	Not Available	636	Open in IMG/M
3300032001\|Ga0306922_11713520	Not Available	622	Open in IMG/M
3300032035\|Ga0310911_10578087	Not Available	652	Open in IMG/M
3300032039\|Ga0318559_10281766	Not Available	771	Open in IMG/M
3300032041\|Ga0318549_10302353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	721	Open in IMG/M
3300032055\|Ga0318575_10239383	Not Available	915	Open in IMG/M
3300032068\|Ga0318553_10741473	Not Available	514	Open in IMG/M
3300032076\|Ga0306924_10612473	All Organisms → cellular organisms → Bacteria → Proteobacteria	1231	Open in IMG/M
3300032076\|Ga0306924_10623116	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300032076\|Ga0306924_12332863	Not Available	542	Open in IMG/M
3300032089\|Ga0318525_10639968	Not Available	542	Open in IMG/M
3300032205\|Ga0307472_100596294	Not Available	974	Open in IMG/M
3300032205\|Ga0307472_102782422	Not Available	500	Open in IMG/M
3300032261\|Ga0306920_101317190	Not Available	1038	Open in IMG/M
3300033289\|Ga0310914_10331468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1375	Open in IMG/M
3300033289\|Ga0310914_10867680	Not Available	802	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.76%
Host-Associated	Host-Associated	4.24%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.76%
Plants	Host-Associated → Plants	3.64%
Fungi	Host-Associated → Fungi	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.82%
Mycelium	Host-Associated → Fungi → Mycelium	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.21%
Loam	Environmental → Terrestrial → Soil → Loam	14.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.61%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.61%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_84300	2032320005	Soil	MKIPPTIEPIAHISPYRRIDTSHPGRKRVITLDAWQASGSTREPDPAIYSYDARNRRWVLKEDVR
JGI12627J18819_1000969510	3300001867	Forest Soil	IPPTIEPIAHISPYRRIDPSHPGRKRVITLEEWKASGSTRKPDPAIYSYDARNRCWVLKEDVR*
JGI12627J18819_100123406	3300001867	Forest Soil	MKIPPTIEPIAHISPYRRIDPSRPGRKRVITLDEWKASGSTRKPDPAIYSYDERNRCWVLKQDVR*
Ga0066388_1020439271	3300005332	Tropical Forest Soil	NRSWGSQMKIPPTIEPIAHISPYRRIDPSRPERKRVITLDEWQASGSKREPDPAIYSYDARNRRWVLKEDHRPQGRR*
Ga0066388_1035197003	3300005332	Tropical Forest Soil	RSWRPQMKIPPNIEPIAHVSPYRRIDPEHPSRKRIITLEEWVASRARREPDPALYSYDARNRRWVLKEGV*
Ga0070668_1005828971	3300005347	Switchgrass Rhizosphere	KIPPTIEPIAHISPYRRIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEDVR*
Ga0070671_1018172231	3300005355	Switchgrass Rhizosphere	WQMKIPPTIEPIAHISPYRRIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEDVR*
Ga0070710_103979241	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RPRNRSWGSQMKIPPTIEPIAHISPYRRIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEDVR*
Ga0070710_108634091	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	QMKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTRTPDPEIYSYDARNRRWVLKEGVR*
Ga0070697_1012606731	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RQRDRRRRIAAHHPGDEFQASGITREPDPAIYSYDARNRRWVLKEDVR*
Ga0070693_1007612583	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	IDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEDVR*
Ga0066903_1002117784	3300005764	Tropical Forest Soil	MKIPPTIEAIAHISPYRRIDPSRPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEGAMRTNDARF*
Ga0066903_1041501432	3300005764	Tropical Forest Soil	MKIPPTIEPIAHISPYRRIDPERPRKRIITYDEWAASGAKREPDPALYSYDARNRRWVLK
Ga0066903_1061414792	3300005764	Tropical Forest Soil	MKIPPNIEPIAHVSPYRRIDPEHPGRKRIITLEEWVASRAAREPDPALYSYDARNRRWLLKEGV*
Ga0066903_1084693351	3300005764	Tropical Forest Soil	IAHISPYRRIDPSHPGRKRVITLDEWKASGSTRKPDPAIYSYDERNRRWVLKEGVR*
Ga0070716_1002280782	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKIPPTIEPIAHISPYRRIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEDVR*
Ga0070716_1011349682	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKILPNIEPIAQISPYQRIDPEHPCRKRIITLDEWAAGGAAREPDPAVYKYDAWNRRWVLKEGA*
Ga0070716_1013092302	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKILPNIETIAHISPYQRIDPEHPGRKRIITLNGWAASGAAREPDPAVYKYDAWKRRWVLKEGA*
Ga0070712_1006069953	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	IDTSHPGRKRVITLDEWQASGSTREPDPTIYSYDARNRRWVLKEDVR*
Ga0068865_1010119571	3300006881	Miscanthus Rhizosphere	GIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEDVR*
Ga0126374_108095112	3300009792	Tropical Forest Soil	MKIPPNTEPIAHVSPYRRIDPEHPSRKRIITLEEWVASRAAREPDPALYSYDAGNRRWVLKEGV*
Ga0126380_122151931	3300010043	Tropical Forest Soil	SWGSQIKIPPTIEPIAHIWPYRPIDPSHPGRKRVITLDEWQASGSKREPDPAIYSYDARNRRWVLKEGV*
Ga0126384_111068031	3300010046	Tropical Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTREPDPAIYNYDARNRRWVLKEGLR*
Ga0126382_114002891	3300010047	Tropical Forest Soil	MKIPPTTEPIAHISPYRLIDPSHPGRKLVITLDEWQASGSTRKPDPAIYSYDGRNRRWVLKEGVR*
Ga0126373_110404611	3300010048	Tropical Forest Soil	RSRGSQMKIPPTIEPIAHISPYRRIDPAHPGRKRVITLDEWQASGSTRKPDPAIYTYDARNRRWVLKEGVR*
Ga0126373_115881541	3300010048	Tropical Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTRKPDPAIYSYDARNRC
Ga0126373_118295921	3300010048	Tropical Forest Soil	HISPYRRIDPSHPGRKRVITLDEWQASGSTREPDPAIYNYDARNRRWVLKEGLR*
Ga0126373_130924061	3300010048	Tropical Forest Soil	MKIPPTIEPIAHISPYRRIDPSRPERKRVITLDKWQASGSTREPDPAIYNYDARNRRWVLKEGLR*
Ga0126370_101822243	3300010358	Tropical Forest Soil	YRRIDPSHPGRKRVITLDEWQTSGSTRKPDPAIYTYDARNRRWVLKEGVR*
Ga0126376_104984591	3300010359	Tropical Forest Soil	MKIPPNIEPIAHVSPYRRIDPEHPNRKRIITLEEWVASRAAREPDPALYSYDARNRRWLLKEGV*
Ga0126376_108824641	3300010359	Tropical Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTREPDPATYSYDARNRRWVLKEGVR*
Ga0126376_124819981	3300010359	Tropical Forest Soil	MPKPEFRPRNRSWGSQMKISPTIEPIAHMSPYRRIDPLRPGRKRVITQDEWQASGSTREPDPAIYSYDARNRRWVLKEGVR*
Ga0126372_128924071	3300010360	Tropical Forest Soil	RNRSWGGADEDSPDYEPIAHISPCRRIDPSHPGRKRVITLDEWQTSGSTRKPDPAIYTYDARNRRWVLKEGVR*
Ga0126378_108882051	3300010361	Tropical Forest Soil	EPIAHVSPYRRIDPEHPSWKRTITLEEWVASRAAREPDPALYSYDARNRRWLLKEGV*
Ga0126378_132453761	3300010361	Tropical Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQTSGSTREPDPAIYTYDARNRRWVLKEGV*
Ga0126379_100778047	3300010366	Tropical Forest Soil	MKIPPTIEPIAYISPYRRIDPSHPGRKRVITLDEWQTSGSTREPDPAIYTYDARNRRWVLKEGVR*
Ga0126379_104299431	3300010366	Tropical Forest Soil	MKIPPTIEPIAHISPYRPIDPSHPGRKRVITLDEWQASGSTRKPDPAIYSYDARNRRWVLKEGVR*
Ga0126379_120948341	3300010366	Tropical Forest Soil	PTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTREPDPATYSYDARNRRWVLKEGVR*
Ga0126381_1003510391	3300010376	Tropical Forest Soil	PILGVQMKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTREPDPATYSYDARNRRWVLKEGVR*
Ga0126381_1012953521	3300010376	Tropical Forest Soil	SEFRPRNRSWGSQMKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTREPDPAIYNYDARNRRWVLKEGLR*
Ga0126381_1015356142	3300010376	Tropical Forest Soil	MKIPPNIEPIAHVSPYRRIDPEHPSWKRTITLEEWVASRAAREPDPALYSYDARNRRWVLKEGA*
Ga0126381_1018448141	3300010376	Tropical Forest Soil	MKIPPTIEPIEHIAPYRRIDPSHPGQKRVITLDEWQASGSTRKPDPAIYSYDARSRCWVLKEGVR*
Ga0126381_1027802981	3300010376	Tropical Forest Soil	KIPPTIEPIAHISPYRRIDPSRPERKRVITLDEWQASGSKREPDPAIYSYDARNRRWVLKEGVR*
Ga0126381_1028564311	3300010376	Tropical Forest Soil	EPIAHISPYRRIDPSHPGRKRVITLDEWQTSGSTRKPDPAIYTYDARNRRWVLKEGVR*
Ga0126381_1041773152	3300010376	Tropical Forest Soil	DPSRPGRKRVITVDEWQASGSTRKQDPAIYSYDAQNRRWVLKEDVR*
Ga0126381_1047189231	3300010376	Tropical Forest Soil	MKISPHIEPIAHVSPYRRIDPEHPGRKPIITRDEWASSGAAREPDPALYSYDARKRRWVLKEGVR*
Ga0126381_1048102191	3300010376	Tropical Forest Soil	MKIPPNIEPIAHVSPYRRIDPEHPSRKRIITLEEWVASRARREPDPTLYSYDARNRRWVLKEG
Ga0126383_103058512	3300010398	Tropical Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQTSGSTRKPDPAIYTYDARNRRWVLKEGVR*
Ga0126383_108448251	3300010398	Tropical Forest Soil	RNRSWGSQMKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTREPDPAIYNYDARNRRWVLKEGLR*
Ga0126383_112585111	3300010398	Tropical Forest Soil	MKIPPNTEPIAHVSPYRRIDPEHPSRKRIITRDEWVASHAAREPDPALYSYDARNRCWVLKEGV*
Ga0134127_109085292	3300010399	Terrestrial Soil	MKIPPTIEPIAHISPYRRIDTSHPGRKRVITLDEWQANGSTREPDPAIYSYDARNRRWVLKEDVR*
Ga0153943_11071251	3300012177	Attine Ant Fungus Gardens	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTRKPDPAIYSYDERNRCWVLKQDVR*
Ga0137364_103855361	3300012198	Vadose Zone Soil	MKIPPNIEPIAHVSPYPRIDPTHPGRKRIITRDEWAASGAAREPDPALYSYDARKRRWVLKEGV*
Ga0137371_100896313	3300012356	Vadose Zone Soil	MKIPPNIEPIAHVSPYPRIDPTHPSRKRIITRDEWAASGAAREPDPALYSYDARKRRWVLKEGV*
Ga0164299_106322662	3300012958	Soil	KSEFRPRNRSWGLQMKIPPTIEPIANISPYRRIDPSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRVLKEDVR*
Ga0126369_101909904	3300012971	Tropical Forest Soil	MKIHPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTRKPDPAIYSYDARNRRWVLKEGVR*
Ga0126369_116399012	3300012971	Tropical Forest Soil	MKIPPNIEPIAHVSPYRRIDPEHPGRKRIITLEEWVASRAAREPDPALYSYDARNRRWVLKEGV*
Ga0126369_129631261	3300012971	Tropical Forest Soil	MKIPPNIEPIAHVSPYRRIDPEHPSRKRIITRDEWVASHAAREPDPALYSYDARNRCWVLKEGV*
Ga0164306_108439981	3300012988	Soil	EFRPRNRSWGSQMKIPPTIEPIAHISPYRRIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEDVR*
Ga0164305_119118231	3300012989	Soil	SWGSQMKIPPTIEPIAHISPYRRIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEDVR*
Ga0182036_105019731	3300016270	Soil	MKIPPTIEPIAHITPYRCIDPSHPGRKRVITLDEWRASGSTRKPDPAIYTYDARNRRWVLKEGVR
Ga0182041_109655752	3300016294	Soil	MKIPPTIEPIAHISPYRRIDPAHPGRKRVITLDEWQASGSKRKPDPAIYSYDARNRCWVLKE
Ga0182041_111131621	3300016294	Soil	MKIRPNIEPITHISPYRRIDPERPGRKAIITVDEWLASGATREPDAAVYSYDTRSRRWVLKESVR
Ga0182033_105400562	3300016319	Soil	MKIPANIEPIAHVSPYRRIDPEHPGRKRIITLEEWVASRAAREPDPALYSYDARNRRWVLKEGA
Ga0182035_100930966	3300016341	Soil	HISPYRRIDPSRPERKRVITLDEWQASGSTREPDPAIYSYDERNRRWVLKEGVR
Ga0182035_104046012	3300016341	Soil	MKIPPNIEPIAHVSPYRRIDPEHPSRKRIITLDEWVASRAAREPDPALYSYDARNRRWVLKEGVR
Ga0182035_112343331	3300016341	Soil	MKIPPNTEPIAHVSPYRRIDPERPGRKRIITRDEWAASGAAREPDPALYSYDAQNRRWVLKEGV
Ga0182032_110665382	3300016357	Soil	SQMKIPSTIEPIAHISPYRPIDPSHPGRKRVITLDEWQASGSKREPDPAIYSYDARNRRWVLKEGVR
Ga0182034_101258963	3300016371	Soil	MKISPNLEPIAHVLPYRRIDPEHPSRKRIITRDEWVASRARREPDPALYSYDARDRRWVL
Ga0182034_120658171	3300016371	Soil	TIEPIAHISPYRRIDPSRPERKRVITLDEWQASGSTREPDPAIYSYDERNRRWVLKEGVR
Ga0182040_118692873	3300016387	Soil	MKIPPNIEPIAHVSPYRRIDPEHPGRKRIITLEEWVASRAAREPDPALYSYDAQNRRWVLKEGA
Ga0182040_119051802	3300016387	Soil	MKIPPTIEPIAHISPYRRIDPAHPGRKRVITLDEWQASGSTRKPDPAIYTYDERNRCWVLKEGVR
Ga0182037_118541701	3300016404	Soil	MKIPPNTEPIAHVSPYRRIDPERPGRRKQIITRDEWAASGAAREPDPALYSYDARNRRWVLTKGV
Ga0182039_117603131	3300016422	Soil	DPSHPGRKRVITLDEWQASGSTRKPDPAIYTYDARNRRWVLKEGVR
Ga0182039_118342082	3300016422	Soil	HPGRKRVITLDEWQASGSTRKPDPAIYSCDARNRCWVVKEDVR
Ga0182039_120341772	3300016422	Soil	MKIPPTIEPITHISPYRRIDPSRPGRKRVITLDEWQANGSTREPDPAIYSDDAGNRRWVLKEGVR
Ga0163161_109401141	3300017792	Switchgrass Rhizosphere	MKIEPIAHISPYRRIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEYV
Ga0210407_100149352	3300020579	Soil	MKIPPNTEPIAHVSPYRRIDPEHPSRKRIITLEEWVASHAAREPDPALYSYDARNRRWVLKEGV
Ga0210403_104254181	3300020580	Soil	MKILPNIEPIAQISPYQRIDPEHPCRKRIITLDEWAAGGAAREPDPAVYKYDAWNRRWVLKEGA
Ga0210399_114631451	3300020581	Soil	MKILPNIETIAHISPYQRIDPEHPGRKRIITLNEWAASGAAREPDPAVYKYDAWNRRWVL
Ga0210400_113862692	3300021170	Soil	MKILPNIETIAHISPYQRIDPEHPGRKRIITLNEWAASGAAREPDPAVYKYDAWNRRWVLKEGA
Ga0210386_113330831	3300021406	Soil	RIDPEHPSRKRIITLEEWVASHAAREPDPALYSYDARNRRWVLKEGV
Ga0126371_115407351	3300021560	Tropical Forest Soil	SPYRRIDPSHPGRKRVITLDEWQTSGSTREPDPAIYTYDARNRRWVLKEGVR
Ga0207642_104197702	3300025899	Miscanthus Rhizosphere	RIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEDVR
Ga0207693_101284331	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	SWGSQMKIPPTIEPIAHISPYRRIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEDVR
Ga0207663_115138411	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	EPIDISPYRRIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEDVR
Ga0207665_108917451	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKIPPNTEPIAHVSPYRRIDPEHPSRKRIITLEEWVASHAAREPDPALYSYDAR
Ga0207712_116601961	3300025961	Switchgrass Rhizosphere	MKIEPIAHISPYRRIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKEDV
Ga0209730_10466941	3300027034	Forest Soil	VGIPTTQPILGAQMKIPPTIEPIAHISPYRRIDPSHPGRKRVITLEEWKASGSTRKPDPAIYSYDARNRCWVLKEDVR
Ga0208365_10183801	3300027070	Forest Soil	MKIPPTIEPIAHISPYRRIDPSRPGRKRVITLDEWKASGGTRKPDPAIYSYDERNRCWVLKQDVR
Ga0209215_10222751	3300027266	Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLEEWKASGSTRKPDPAIYSYDARNRCWVLKEDVR
Ga0209731_10051693	3300027326	Forest Soil	MKIPPTIEPIAHISPYRRIDPSRPGRKRVITLDEWKASGSTRKPDPAIYSYDERNRCWVLKQDVR
Ga0209418_10194162	3300027371	Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWKASGSTRKPDPAIYSYDERNRCWVLKEDVR
Ga0318516_103089561	3300031543	Soil	MKIPPTIEPIAHISPYRRIDPSRPERKRVITLDEWQASGSTREPDPAIYSYDERNRRWVLKEGVR
Ga0318516_106607542	3300031543	Soil	MKIPPNIEPIAHVSPYRRIDPEHPGRKRIITLEEWVASRAAREPDPALYSYDARNRRWLLKEGV
Ga0318538_101948722	3300031546	Soil	MKIPPNIEPIAHVSPYRRIDPEHPSRKRIITRDEWVASRARREPDPALYSYDARNRRWVLKGGV
Ga0318528_104542511	3300031561	Soil	DPAHPGRKRVITLDEWQASGSKRKPDPAIYSYDARNRCWVLKEDVQ
Ga0318515_104240121	3300031572	Soil	MKIPPTIEPIAHITPYRRIDPSHPGRKRVITLDEWRASGSTRKPDPAIYTYDARNRRWVLKEGVR
Ga0310915_108162052	3300031573	Soil	MKISTNLEPIAHVLPYRRIDPEHPSRKRIITRDEWVASRARREPDPALYSYDARNRRWVLKGACDQDE
Ga0310915_109310842	3300031573	Soil	MKIPPTIEPITHISPYRRIDPSRPGRKRVITLDEWQANGSTREPDPAIYSYDALNRRWVLKEGVR
Ga0318542_104575881	3300031668	Soil	MPKSEFRPRKPILGARMKIPPTIEPIAHISPYHRIDPAHPGRKRVITLDEWQASGSTRKPDPAIYSYDARNRCWVLKEDVR
Ga0318561_106891622	3300031679	Soil	HITPYRRIDPSHPGRKRVITLDEWRASGSTRKPDPAIYSYDERNRRWVLKEGVR
Ga0318574_102949693	3300031680	Soil	SPYRRIDPSRPERKRVITLDEWQASGSTREPDPAIYSYDERNRRWVLKEGVR
Ga0318572_102942432	3300031681	Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWKASGSSRKPDLEIYNYDARNRRWVLKEGGDEDK
Ga0307476_106055011	3300031715	Hardwood Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWKASGSTRKPDPAIYSYDERNRCWVLKKDVR
Ga0307476_107165961	3300031715	Hardwood Forest Soil	SHPGRKRVITLDEWKASGSTRKPDSAIYSYDERNRCWVLKQDVR
Ga0307474_1000032910	3300031718	Hardwood Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWKASGSTRKPDSAIYSYDERNRCWVLKQDVR
Ga0307474_1000565210	3300031718	Hardwood Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLEEWKASGSTRKPDPAIYSYDARNRCWVLQEDVR
Ga0307474_112929401	3300031718	Hardwood Forest Soil	MRIPRNIAPIAHISPYRRIDPEHPGRKQIITLDEWMASGTTREPDLAIYSYDTRSRRWVLKE
Ga0318501_104434131	3300031736	Soil	EPIAHISPYRRIDPAHPGRKRVITLDEWQASGSTRKPDPAIYTYDERNRCWVLKEGVR
Ga0307468_1003403901	3300031740	Hardwood Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTRKPDPAIYSYDARNRRWVLKEDVR
Ga0306918_101470931	3300031744	Soil	LEPIAHVLPYRRIDPEHPSRKRIITRDEWVASRARREPDPALYSYDARNRRWVLKEGV
Ga0306918_104134062	3300031744	Soil	MKIPPTIEPVTHISPYRRIDPSRPGRKRVITLDEWQANGSTREPDPAIYSYDALNRRWVLKEGVR
Ga0306918_107501691	3300031744	Soil	EPIAHVSPYRRIDPERPGRRKRIITRDEWAASGPTREPDPALYSYDARNRRWVLKEGV
Ga0306918_110139901	3300031744	Soil	PPTIEPIAHISPYRRIDPAHPGRKRVITLDEWQASGSKRKPDPAIYSYDARNRCWVLKEDVQ
Ga0307477_106835842	3300031753	Hardwood Forest Soil	IDPSRPGRKRVITLDEWKASGSTRKPDPAIYSYDERNRCWVLKQDVR
Ga0318521_106635222	3300031770	Soil	MKIPPTIEPITHISPYRRIDPSRPERKRVITLDEWQASGSTREPDPAIYSYDERNRRWVLKEGVR
Ga0318546_109099073	3300031771	Soil	MKIPPNIEAIAHVSPYRRIDLEHPIRKRIITRDEWVASGAAREPDPALYGYDPPNRRWVLKEGVR
Ga0318552_103901242	3300031782	Soil	MKIPPTIEPIAHISPYRRIDPSRPERKRVITLDEWQASGSTREPDPAIYSYDAGNQRWVLKEGVR
Ga0318497_105586591	3300031805	Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTRKPDPAIYSYDARNQCWVLKEDVR
Ga0307478_1001212511	3300031823	Hardwood Forest Soil	MPRSEFRPRNRSWGSQMKIPPTIEPIAHISPYRRIDPSRPGRKRVITLDEWKASGSTRKPDPAIYSYDERNRCWVLKQDVR
Ga0310917_101565354	3300031833	Soil	MKISPNLEPIAHVLPYRRIDPEHPSRKRIITRDEWVASRARREPDPALYSYDARDRRWVLKGGV
Ga0306919_102075782	3300031879	Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTRKPDPAIYSYDARNRCWVLKEDVR
Ga0306919_105093262	3300031879	Soil	MKIPPTIEPIAHITPYRRIDPSHPGRKRVITLDEWRASGSTRKPDPAIYSYDERNRRWVLKEGER
Ga0306919_107028453	3300031879	Soil	MKISPNLEPIAHVLPYRRIDPEHPSRKRIITLEEWVASRARREPDPAFYSYDARNRRWVLKEG
Ga0318544_104166771	3300031880	Soil	RSRGSQMKIPPTIEPIAHISPYRRIDPSRPERKRVITLDEWQASGSTREPDPAIYSYDERNRRWVLKEGVR
Ga0306925_104277233	3300031890	Soil	MKISPNLEPIAHVLPYRRIDPEHPSRKRIITRDEWVASRARREPDPALYSYDARNSAGC
Ga0306925_106863922	3300031890	Soil	MKIPPNIEPIAHVSPYRRIDPEHPGRKRIITLEEWVASRAAREPDPALYSYDARNRR
Ga0306925_110870151	3300031890	Soil	MKIPPTIEPIAHISPYRRIDPLRPGRKRVITLDEWQASGSTREPDPAIYSDDAGNRRWVLKEGVR
Ga0318536_106684241	3300031893	Soil	MPKSEFRPRKPILGAQMKIPPTIEPIAHISPYRRIDPSRPERKRVITLDEWQASGSTREPDPAIYSYDERNRRWVLKEGVR
Ga0306923_108134501	3300031910	Soil	SPYRRIDPEHPNRKRIITLEEWVASRAAREPDPALYSYDAGNRRWVLKEGV
Ga0306923_117959911	3300031910	Soil	MKIPPTIEPIAHISPYRRIDPSRPGRKRVITLDEWQASGSKREPDPAIYSYDARNRRWVLNEGVR
Ga0306923_120665031	3300031910	Soil	MKIPPNIEPIAHVSPYRRIDPEHPGRKRIITLEEWVASRAAREPDPALYSYDARNRRWVLKEGA
Ga0306923_120739311	3300031910	Soil	MKIPPTIEPIAHISPYRRIDPAHPGRKRVITLDEWQASGSKRKPDPAIYSYDARNRCWVLKEDVQ
Ga0306923_124207432	3300031910	Soil	MKIPPNIEPIAHVSPYRRIDPEHPSRKRIITLDKWVASHAAREPDPALYSYDARNRRWVLKEGVR
Ga0306923_125467041	3300031910	Soil	MKISPNLEPIAHVLPYRRIDPEHPSRKRIITRDEWVASRARREPDPALYSYDARNRRWVLKGACDQDE
Ga0306921_102303912	3300031912	Soil	MKISPNLEPIAHVLPYRRIDPEHPSRKRIITRDEWVASRARREPDPALYSYDARNRRWVLKEGV
Ga0306921_117424301	3300031912	Soil	RKPILGARMKIPPTIEPIAHISPYHRIDPAHPGRKRVITLDEWQASGSTRKPDPAIYSYDARNRCWVLKEDVR
Ga0306921_126014521	3300031912	Soil	MKIRPNIEPITHISPYRRIDPERPGRKVIITVDEWLASGATREPDAAVYSYDTRSRRWVLKESVR
Ga0310912_105362091	3300031941	Soil	QMKIPPNIEPIAHVSPYRRIDPEHPGRKRIITLEEWVASRAAREPDPALYSYDARNRRWVLKEGV
Ga0310916_101266663	3300031942	Soil	MKISPNLEPIAHVLPYRRIDPEHPSRKRIITRDEWVASRARREPDPALYSYDARNRRWVLKGGV
Ga0310916_109635851	3300031942	Soil	MKIPPTIEPIAHISPYRRIDPAHPGRKRVITLDEWQASGSTRKPDPAIYSYDARNRCWVLKEDVR
Ga0310916_117088483	3300031942	Soil	MKIPANIEPIAHVSPYRRIDLEYPRRKRIIALEEWVARRAAREPDPALYSYDARNRR
Ga0310909_105365543	3300031947	Soil	RRIDPEYPGRKRIITLEEWVASRAAREPDPALYSYDARNRRWVLKEGA
Ga0310909_115587631	3300031947	Soil	RPRKPILGAQMKIPPTIEPIAHISPYRRIDPAHPGRKRVITLDEWQASGSTRKPDPAIYTYDERNRCWVLKEGVR
Ga0306926_117902252	3300031954	Soil	MKIRPNIEPITHISPYRRIDPERPGRKVIITVDEWLASGATREPDPAIYSYDTPSRRWVLKESVR
Ga0306926_123339981	3300031954	Soil	MKIPKNTEPIAHVSPYRRIDPERPGRRKRIITRDEWAASGPTREPDPALYSYDARNRRWVLKEGV
Ga0307479_105007271	3300031962	Hardwood Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWKASGSTRKPDPAIYSYDARNRCWVLKEEVR
Ga0307479_114800601	3300031962	Hardwood Forest Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWKASGSTRKPDPAIYSYDERNRCWVLKEEVR
Ga0307479_117675001	3300031962	Hardwood Forest Soil	TLDEWKASGSTRKPDPAIYSYDARNRCWVLKEDER
Ga0306922_117135201	3300032001	Soil	MKIRQNIEPITHISPYRRIDPERPGRKAIITVDEWLASGATREPDPAIYSYDVRSRRWVLKESVR
Ga0310911_105780871	3300032035	Soil	MKIPPTIEPIAHISPYRRIDPAHPGRKRVITLDEWQASGSKRKPDPAIYSYDARNRCWVLKEDVR
Ga0318559_102817662	3300032039	Soil	MPKSEFRPRKPILGAQMKIPPTIEPIAHISPYRRIDPAHPGRKRVITLDEWQASGSKRKPDPAIYSYDARNRRWVLKEGVR
Ga0318549_103023531	3300032041	Soil	MKIPPTIEPIAHISPYRRIDPSHPGRKRVITLDEWQASGSTREPDPATYSYDARNRR
Ga0318575_102393831	3300032055	Soil	MPKSEFRPRNRSRGSQMKIPPTIEPIAHISPYRRIDPSRPERKRVITLDEWQASGSTREPDPAIYSYDALNRRWVLKEGVR
Ga0318553_107414731	3300032068	Soil	MKTPPNTAPIAHVSPYRRIDPERPGGRKRVITRDEWAASGATREPDPALYSYDARNRRWLLKEGV
Ga0306924_106124732	3300032076	Soil	MKIPPTIAHISPYRRIDPSHPGRKRVITLDEWQASGSTRKPDPAIYTYDARNRRWVLKEGVR
Ga0306924_106231162	3300032076	Soil	MKIPPNIEPIAHVSPYRRIDPEHPSRKRIITLEEWVASRARREPDPALYSYDARNRRWVLKEGV
Ga0306924_123328631	3300032076	Soil	MKIRQNIEPITHISPYRRIDPERPGRKAIITVDEWLASGATREPDPAIYSYDTRSRRWVLKESVR
Ga0318525_106399681	3300032089	Soil	MPKSEFRPRNRSRGSQMKIPPTIEPITHISPYRRIDPSRPERKRVITLDEWQASGSTREPDPAIYSYDERNRRWVLKEGVR
Ga0307472_1005962941	3300032205	Hardwood Forest Soil	MKIPPTIEPIAHISPYRRIDTSHPGRKRVITLDEWQASGSTREPDPAIYSYDARNRRWVLKQDVR
Ga0307472_1027824221	3300032205	Hardwood Forest Soil	IAQISPYQRIDPEHPCRKRIITLDEWAAGGAAREPDPAVYKYDAWNRRWVLKEGA
Ga0306920_1013171901	3300032261	Soil	MPKSEFRPRNRSRGSQMKIPPTIEPIAHISPYRRIDPSRPERKRVITLDEWQASGSTREPDPAIYSYDERNRRWVLKEGVR
Ga0310914_103314682	3300033289	Soil	MKIPPNIEPIAHVSPYRRIDPEHPGRKRIITLEEWVASRAAREPDPALYSYDARNRRWVLKEGVR
Ga0310914_108676802	3300033289	Soil	MKISPNLEPIAHVLPYRRIDPEHPSRKRIITRDEWVASRARREPDPALYSYDAQNRRWVLKGGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F038825

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences