Basic Information | |
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Family ID | F038908 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 165 |
Average Sequence Length | 90 residues |
Representative Sequence | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRRMC |
Number of Associated Samples | 132 |
Number of Associated Scaffolds | 165 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 73.94 % |
% of genes near scaffold ends (potentially truncated) | 35.15 % |
% of genes from short scaffolds (< 2000 bps) | 84.24 % |
Associated GOLD sequencing projects | 127 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.38 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (69.697 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.152 % of family members) |
Environment Ontology (ENVO) | Unclassified (26.061 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (37.576 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 17.24% β-sheet: 18.10% Coil/Unstructured: 64.66% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.38 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 165 Family Scaffolds |
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PF00903 | Glyoxalase | 28.48 |
PF02621 | VitK2_biosynth | 16.36 |
PF13414 | TPR_11 | 4.85 |
PF13561 | adh_short_C2 | 4.85 |
PF13374 | TPR_10 | 3.03 |
PF01436 | NHL | 2.42 |
PF12681 | Glyoxalase_2 | 2.42 |
PF08811 | DUF1800 | 1.82 |
PF00106 | adh_short | 1.82 |
PF00296 | Bac_luciferase | 1.82 |
PF01717 | Meth_synt_2 | 1.21 |
PF03972 | MmgE_PrpD | 0.61 |
PF13565 | HTH_32 | 0.61 |
PF13432 | TPR_16 | 0.61 |
PF05670 | NFACT-R_1 | 0.61 |
PF03358 | FMN_red | 0.61 |
COG ID | Name | Functional Category | % Frequency in 165 Family Scaffolds |
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COG1427 | Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway) | Coenzyme transport and metabolism [H] | 16.36 |
COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 1.82 |
COG5267 | Uncharacterized conserved protein, DUF1800 family | Function unknown [S] | 1.82 |
COG0620 | Methionine synthase II (cobalamin-independent) | Amino acid transport and metabolism [E] | 1.21 |
COG1293 | Ribosome quality control (RQC) protein RqcH, Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and RNA- (NFACT) binding domains | Translation, ribosomal structure and biogenesis [J] | 0.61 |
COG2079 | 2-methylcitrate dehydratase PrpD | Carbohydrate transport and metabolism [G] | 0.61 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 69.70 % |
All Organisms | root | All Organisms | 30.30 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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3300000956|JGI10216J12902_111073582 | All Organisms → cellular organisms → Bacteria | 1690 | Open in IMG/M |
3300001431|F14TB_100179093 | Not Available | 775 | Open in IMG/M |
3300001431|F14TB_109624306 | Not Available | 525 | Open in IMG/M |
3300003321|soilH1_10385003 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 1478 | Open in IMG/M |
3300004798|Ga0058859_10117374 | Not Available | 1932 | Open in IMG/M |
3300004801|Ga0058860_10231039 | All Organisms → cellular organisms → Bacteria | 2186 | Open in IMG/M |
3300005172|Ga0066683_10548347 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 705 | Open in IMG/M |
3300005180|Ga0066685_10894323 | Not Available | 594 | Open in IMG/M |
3300005332|Ga0066388_100993142 | All Organisms → cellular organisms → Bacteria | 1404 | Open in IMG/M |
3300005332|Ga0066388_106694250 | Not Available | 580 | Open in IMG/M |
3300005441|Ga0070700_100082019 | Not Available | 2085 | Open in IMG/M |
3300005445|Ga0070708_100237988 | All Organisms → cellular organisms → Bacteria | 1709 | Open in IMG/M |
3300005544|Ga0070686_100915061 | Not Available | 714 | Open in IMG/M |
3300005569|Ga0066705_10537207 | Not Available | 727 | Open in IMG/M |
3300005617|Ga0068859_100256267 | Not Available | 1840 | Open in IMG/M |
3300005713|Ga0066905_100151767 | Not Available | 1670 | Open in IMG/M |
3300005764|Ga0066903_100183756 | All Organisms → cellular organisms → Bacteria | 3089 | Open in IMG/M |
3300005937|Ga0081455_10089857 | All Organisms → cellular organisms → Bacteria | 2492 | Open in IMG/M |
3300005981|Ga0081538_10003512 | All Organisms → cellular organisms → Bacteria | 14772 | Open in IMG/M |
3300005983|Ga0081540_1068492 | All Organisms → cellular organisms → Bacteria | 1653 | Open in IMG/M |
3300006034|Ga0066656_10595131 | Not Available | 716 | Open in IMG/M |
3300006049|Ga0075417_10093482 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 1357 | Open in IMG/M |
3300006050|Ga0075028_100632537 | Not Available | 638 | Open in IMG/M |
3300006794|Ga0066658_10341510 | All Organisms → cellular organisms → Bacteria | 800 | Open in IMG/M |
3300006845|Ga0075421_101415079 | All Organisms → cellular organisms → Bacteria | 764 | Open in IMG/M |
3300006846|Ga0075430_100580602 | Not Available | 925 | Open in IMG/M |
3300006853|Ga0075420_100965850 | All Organisms → cellular organisms → Bacteria | 733 | Open in IMG/M |
3300006853|Ga0075420_101009946 | Not Available | 716 | Open in IMG/M |
3300006854|Ga0075425_102538806 | Not Available | 567 | Open in IMG/M |
3300006871|Ga0075434_100456526 | Not Available | 1299 | Open in IMG/M |
3300006871|Ga0075434_101394375 | Not Available | 711 | Open in IMG/M |
3300006880|Ga0075429_100018929 | All Organisms → cellular organisms → Bacteria | 5965 | Open in IMG/M |
3300006904|Ga0075424_101727009 | Not Available | 663 | Open in IMG/M |
3300006904|Ga0075424_101958049 | Not Available | 619 | Open in IMG/M |
3300006969|Ga0075419_10072341 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2186 | Open in IMG/M |
3300006969|Ga0075419_11131089 | Not Available | 575 | Open in IMG/M |
3300007255|Ga0099791_10095358 | Not Available | 1365 | Open in IMG/M |
3300009012|Ga0066710_100415046 | All Organisms → cellular organisms → Bacteria | 2010 | Open in IMG/M |
3300009012|Ga0066710_101008599 | All Organisms → cellular organisms → Bacteria | 1285 | Open in IMG/M |
3300009012|Ga0066710_101684043 | Not Available | 966 | Open in IMG/M |
3300009090|Ga0099827_10055534 | Not Available | 2997 | Open in IMG/M |
3300009090|Ga0099827_10112224 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2183 | Open in IMG/M |
3300009100|Ga0075418_10117864 | Not Available | 2820 | Open in IMG/M |
3300009137|Ga0066709_100770901 | All Organisms → cellular organisms → Bacteria | 1391 | Open in IMG/M |
3300009147|Ga0114129_10175892 | Not Available | 2915 | Open in IMG/M |
3300009147|Ga0114129_12289819 | Not Available | 649 | Open in IMG/M |
3300009156|Ga0111538_11596377 | Not Available | 822 | Open in IMG/M |
3300009678|Ga0105252_10177898 | Not Available | 901 | Open in IMG/M |
3300009691|Ga0114944_1134318 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 963 | Open in IMG/M |
3300009815|Ga0105070_1021058 | All Organisms → cellular organisms → Bacteria | 1133 | Open in IMG/M |
3300010038|Ga0126315_10955058 | Not Available | 572 | Open in IMG/M |
3300010043|Ga0126380_10669123 | Not Available | 829 | Open in IMG/M |
3300010043|Ga0126380_10734306 | Not Available | 799 | Open in IMG/M |
3300010046|Ga0126384_10366654 | Not Available | 1206 | Open in IMG/M |
3300010046|Ga0126384_10542418 | Not Available | 1009 | Open in IMG/M |
3300010047|Ga0126382_10816632 | Not Available | 797 | Open in IMG/M |
3300010358|Ga0126370_10723261 | Not Available | 878 | Open in IMG/M |
3300010359|Ga0126376_10215462 | All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella | 1604 | Open in IMG/M |
3300010359|Ga0126376_10820288 | Not Available | 910 | Open in IMG/M |
3300010359|Ga0126376_11912733 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 633 | Open in IMG/M |
3300010360|Ga0126372_10488127 | Not Available | 1153 | Open in IMG/M |
3300010360|Ga0126372_11801665 | Not Available | 655 | Open in IMG/M |
3300010362|Ga0126377_10982974 | Not Available | 910 | Open in IMG/M |
3300010366|Ga0126379_11366966 | Not Available | 814 | Open in IMG/M |
3300010366|Ga0126379_11851018 | Not Available | 707 | Open in IMG/M |
3300010366|Ga0126379_12456720 | Not Available | 620 | Open in IMG/M |
3300010391|Ga0136847_13035302 | Not Available | 778 | Open in IMG/M |
3300010398|Ga0126383_10479165 | Not Available | 1299 | Open in IMG/M |
3300010398|Ga0126383_11089160 | Not Available | 888 | Open in IMG/M |
3300010398|Ga0126383_11840096 | Not Available | 694 | Open in IMG/M |
3300010400|Ga0134122_12206714 | Not Available | 594 | Open in IMG/M |
3300011270|Ga0137391_10769401 | Not Available | 795 | Open in IMG/M |
3300011432|Ga0137428_1188254 | Not Available | 612 | Open in IMG/M |
3300012189|Ga0137388_10807824 | Not Available | 869 | Open in IMG/M |
3300012199|Ga0137383_10063850 | Not Available | 2646 | Open in IMG/M |
3300012201|Ga0137365_10703950 | Not Available | 738 | Open in IMG/M |
3300012203|Ga0137399_10348399 | Not Available | 1230 | Open in IMG/M |
3300012204|Ga0137374_10123606 | All Organisms → cellular organisms → Bacteria | 2375 | Open in IMG/M |
3300012212|Ga0150985_107644074 | Not Available | 658 | Open in IMG/M |
3300012212|Ga0150985_107985792 | Not Available | 833 | Open in IMG/M |
3300012212|Ga0150985_111920469 | Not Available | 970 | Open in IMG/M |
3300012351|Ga0137386_10091963 | Not Available | 2137 | Open in IMG/M |
3300012353|Ga0137367_10139997 | All Organisms → cellular organisms → Bacteria | 1769 | Open in IMG/M |
3300012356|Ga0137371_10299973 | Not Available | 1252 | Open in IMG/M |
3300012361|Ga0137360_10737415 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 847 | Open in IMG/M |
3300012362|Ga0137361_10658902 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 958 | Open in IMG/M |
3300012363|Ga0137390_11146582 | Not Available | 726 | Open in IMG/M |
3300012391|Ga0134035_1029469 | Not Available | 575 | Open in IMG/M |
3300012469|Ga0150984_123523470 | Not Available | 669 | Open in IMG/M |
3300012917|Ga0137395_10008542 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 5470 | Open in IMG/M |
3300012923|Ga0137359_10793693 | Not Available | 821 | Open in IMG/M |
3300012929|Ga0137404_11080306 | Not Available | 736 | Open in IMG/M |
3300012948|Ga0126375_11247968 | Not Available | 621 | Open in IMG/M |
3300012951|Ga0164300_11048794 | Not Available | 528 | Open in IMG/M |
3300012971|Ga0126369_10242466 | Not Available | 1768 | Open in IMG/M |
3300012971|Ga0126369_10349373 | Not Available | 1500 | Open in IMG/M |
3300013306|Ga0163162_12027889 | Not Available | 659 | Open in IMG/M |
3300014326|Ga0157380_12991116 | Not Available | 538 | Open in IMG/M |
3300015245|Ga0137409_10005130 | All Organisms → cellular organisms → Bacteria | 13695 | Open in IMG/M |
3300015371|Ga0132258_10076281 | Not Available | 7796 | Open in IMG/M |
3300015374|Ga0132255_103193619 | Not Available | 699 | Open in IMG/M |
3300016404|Ga0182037_11044756 | Not Available | 713 | Open in IMG/M |
3300018077|Ga0184633_10249019 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 913 | Open in IMG/M |
3300018079|Ga0184627_10112434 | All Organisms → cellular organisms → Bacteria | 1440 | Open in IMG/M |
3300019249|Ga0184648_1096089 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1128 | Open in IMG/M |
3300019249|Ga0184648_1238766 | Not Available | 971 | Open in IMG/M |
3300019249|Ga0184648_1447998 | Not Available | 960 | Open in IMG/M |
3300019259|Ga0184646_1055789 | Not Available | 744 | Open in IMG/M |
3300019259|Ga0184646_1410695 | Not Available | 1003 | Open in IMG/M |
3300019279|Ga0184642_1610552 | Not Available | 691 | Open in IMG/M |
3300020193|Ga0194131_10056028 | All Organisms → cellular organisms → Bacteria | 2571 | Open in IMG/M |
3300021086|Ga0179596_10207550 | Not Available | 956 | Open in IMG/M |
3300021307|Ga0179585_1052194 | Not Available | 1009 | Open in IMG/M |
3300022195|Ga0222625_1667422 | Not Available | 689 | Open in IMG/M |
3300022563|Ga0212128_10087001 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 2018 | Open in IMG/M |
(restricted) 3300023208|Ga0233424_10372600 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 540 | Open in IMG/M |
3300026075|Ga0207708_10063318 | Not Available | 2825 | Open in IMG/M |
3300027511|Ga0209843_1009377 | All Organisms → cellular organisms → Bacteria | 2111 | Open in IMG/M |
3300027748|Ga0209689_1396907 | Not Available | 528 | Open in IMG/M |
3300027873|Ga0209814_10081785 | Not Available | 1363 | Open in IMG/M |
3300027874|Ga0209465_10184857 | Not Available | 1039 | Open in IMG/M |
3300027882|Ga0209590_10059886 | Not Available | 2155 | Open in IMG/M |
3300027882|Ga0209590_10089644 | Not Available | 1815 | Open in IMG/M |
3300027882|Ga0209590_10331757 | All Organisms → cellular organisms → Bacteria | 979 | Open in IMG/M |
3300027909|Ga0209382_10206453 | All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella | 2249 | Open in IMG/M |
3300028536|Ga0137415_10427963 | Not Available | 1129 | Open in IMG/M |
3300028597|Ga0247820_11318356 | Not Available | 524 | Open in IMG/M |
3300028608|Ga0247819_10754292 | Not Available | 599 | Open in IMG/M |
3300028809|Ga0247824_10849807 | Not Available | 567 | Open in IMG/M |
3300030570|Ga0247647_1000014 | All Organisms → cellular organisms → Bacteria | 5335 | Open in IMG/M |
3300030829|Ga0308203_1063770 | Not Available | 580 | Open in IMG/M |
3300030831|Ga0308152_110702 | Not Available | 573 | Open in IMG/M |
3300030902|Ga0308202_1039801 | Not Available | 827 | Open in IMG/M |
3300030902|Ga0308202_1133173 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 540 | Open in IMG/M |
3300030903|Ga0308206_1009469 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1420 | Open in IMG/M |
3300030986|Ga0308154_102088 | Not Available | 1025 | Open in IMG/M |
3300030990|Ga0308178_1014206 | Not Available | 1173 | Open in IMG/M |
3300031058|Ga0308189_10093273 | All Organisms → cellular organisms → Bacteria | 940 | Open in IMG/M |
3300031081|Ga0308185_1010461 | Not Available | 978 | Open in IMG/M |
3300031092|Ga0308204_10015529 | All Organisms → cellular organisms → Bacteria | 1485 | Open in IMG/M |
3300031093|Ga0308197_10059665 | Not Available | 1016 | Open in IMG/M |
3300031093|Ga0308197_10061042 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1008 | Open in IMG/M |
3300031096|Ga0308193_1069322 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 561 | Open in IMG/M |
3300031099|Ga0308181_1014763 | Not Available | 1186 | Open in IMG/M |
3300031099|Ga0308181_1178750 | Not Available | 512 | Open in IMG/M |
3300031114|Ga0308187_10245178 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 648 | Open in IMG/M |
3300031421|Ga0308194_10035017 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1206 | Open in IMG/M |
3300031422|Ga0308186_1010966 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 789 | Open in IMG/M |
3300031903|Ga0307407_11217236 | Not Available | 589 | Open in IMG/M |
3300031912|Ga0306921_11411755 | Not Available | 765 | Open in IMG/M |
3300031954|Ga0306926_12335214 | Not Available | 591 | Open in IMG/M |
3300032075|Ga0310890_10494848 | Not Available | 928 | Open in IMG/M |
3300034643|Ga0370545_007068 | Not Available | 1575 | Open in IMG/M |
3300034643|Ga0370545_019588 | Not Available | 1124 | Open in IMG/M |
3300034643|Ga0370545_035566 | Not Available | 916 | Open in IMG/M |
3300034644|Ga0370548_005048 | Not Available | 1591 | Open in IMG/M |
3300034644|Ga0370548_033280 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 853 | Open in IMG/M |
3300034659|Ga0314780_006059 | Not Available | 1673 | Open in IMG/M |
3300034661|Ga0314782_020260 | Not Available | 1125 | Open in IMG/M |
3300034663|Ga0314784_037186 | Not Available | 842 | Open in IMG/M |
3300034666|Ga0314788_088017 | Not Available | 680 | Open in IMG/M |
3300034667|Ga0314792_109065 | Not Available | 698 | Open in IMG/M |
3300034675|Ga0314800_012974 | Not Available | 936 | Open in IMG/M |
3300034678|Ga0314803_090057 | Not Available | 588 | Open in IMG/M |
3300034680|Ga0370541_000802 | Not Available | 2025 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 15.15% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 15.15% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 12.73% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 11.52% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 6.67% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 4.24% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.24% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 3.03% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.42% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.82% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.82% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 1.82% |
Thermal Springs | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs | 1.21% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 1.21% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.21% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.21% |
Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 1.21% |
Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 1.21% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.21% |
Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 1.21% |
Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 0.61% |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 0.61% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment | 0.61% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.61% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.61% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 0.61% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.61% |
Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.61% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.61% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.61% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.61% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.61% |
Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.61% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.61% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.61% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 0.61% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
3300001431 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly | Environmental | Open in IMG/M |
3300003321 | Sugarcane bulk soil Sample H1 | Environmental | Open in IMG/M |
3300004798 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300004801 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300005172 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 | Environmental | Open in IMG/M |
3300005180 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Environmental | Open in IMG/M |
3300005569 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 | Environmental | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Host-Associated | Open in IMG/M |
3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Host-Associated | Open in IMG/M |
3300006034 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105 | Environmental | Open in IMG/M |
3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
3300006794 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 | Environmental | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009678 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 | Environmental | Open in IMG/M |
3300009691 | Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 | Environmental | Open in IMG/M |
3300009815 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 | Environmental | Open in IMG/M |
3300010038 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106 | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010391 | Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406 | Environmental | Open in IMG/M |
3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300011270 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG | Environmental | Open in IMG/M |
3300011432 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2 | Environmental | Open in IMG/M |
3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
3300012201 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG | Environmental | Open in IMG/M |
3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
3300012204 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012351 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG | Environmental | Open in IMG/M |
3300012353 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG | Environmental | Open in IMG/M |
3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012391 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300012917 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG | Environmental | Open in IMG/M |
3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300015245 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300016404 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 | Environmental | Open in IMG/M |
3300018077 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1 | Environmental | Open in IMG/M |
3300018079 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1 | Environmental | Open in IMG/M |
3300019249 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019259 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019279 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300020193 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m | Environmental | Open in IMG/M |
3300021086 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300021307 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022195 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022563 | OV2_combined assembly | Environmental | Open in IMG/M |
3300023208 (restricted) | Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MG | Environmental | Open in IMG/M |
3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027511 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes) | Environmental | Open in IMG/M |
3300027748 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes) | Environmental | Open in IMG/M |
3300027873 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes) | Host-Associated | Open in IMG/M |
3300027874 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes) | Environmental | Open in IMG/M |
3300027882 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300028597 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14 | Environmental | Open in IMG/M |
3300028608 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6 | Environmental | Open in IMG/M |
3300028809 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48 | Environmental | Open in IMG/M |
3300030570 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030829 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030831 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030902 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030903 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030986 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030990 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031081 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031092 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031093 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031096 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031099 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031114 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031421 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031422 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Host-Associated | Open in IMG/M |
3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
3300034643 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034644 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034659 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034661 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034663 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034666 | Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034667 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034675 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034678 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034680 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI10216J12902_1110735822 | 3300000956 | Soil | VAGQFLCEVCFDALTNHMTTAWNEAETAVCDDCLAPPAEHACWQELGEAYGGVELHRDEREQGYLVRLRNGATVHFRWGQPLRSRRIT* |
F14TB_1001790931 | 3300001431 | Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPAQHPCWQELGEAYGSVELHRDERGQGYLVRLRNGATIHFRWSKPLRSPSA* |
F14TB_1096243061 | 3300001431 | Soil | YGIDTTRANGGPTVAGQFLCEVCFDALTNHSTAVWNGLDMAVCEDCLAPPAEHACWQEVGEASGVAEVCPDERGEGYLVRFRNGTSIHFRWSRPVRSRRTG* |
soilH1_103850031 | 3300003321 | Sugarcane Root And Bulk Soil | VAGQFLCEVCFDALTNHTTAVWSGTDTAVCDDCLAPPAEHACWQELGGAYGGVELRRDEREPGYLVRLRTGATVHFRWDRPLRSRRMG* |
Ga0058859_101173742 | 3300004798 | Host-Associated | MPACLKVRRPIPQRTAEVAGQFLCEVCFDTLTNHITAVWNGVDAAVCEDCLAPSTEHPCWQELGEVYGGVELHRDERGQGYLVRLKNGATIHFRWGRPLRPRRMQ* |
Ga0058860_102310394 | 3300004801 | Host-Associated | MPACLKVRRPIPQRTAEVAGQFLCEVCFDTLTNHMTAVWNGVDAAVCEDCLAPSTEHPCWQELGEVYGGVELHRDERGQGYLVRLKNGATIHFRWGRPLRPRRMQ* |
Ga0066683_105483472 | 3300005172 | Soil | DTTRANGGPTVAGQFLCEMCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELRPDERGEGYLVRFKNGTTIHFRWSRAVRSRRTE* |
Ga0066685_108943231 | 3300005180 | Soil | RTDEVAGQFLCEVCFDSLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQALGEAYGGVELRRDEHGQGYLVRLKNGATIHFRWGRPLRSRRLE* |
Ga0066388_1009931422 | 3300005332 | Tropical Forest Soil | VAGQFLCEVCFDTLTNHMTAAWNGVETAVCDDCLAPPPDHVCWQEVAEAYGGVELRRDERGQGYLVRLRTGATVHFRWGQPLRSRRMR* |
Ga0066388_1066942502 | 3300005332 | Tropical Forest Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDTAVCDDCLAPPPDHACWQEVAEAYGGVELRRDERGQGYLVRLRTGATVHFRWGQPLRSRRMR* |
Ga0070700_1000820194 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MPACLKVRRPIPQRTAEVAGQFLCEVCFDTLTNHMTAVWNGVDAAVCEDCLAPSTAHPCWQELGEVYGGVELHRDERGQGYLVRLKNGATIHFRWGRPLRPRRMQ* |
Ga0070708_1002379883 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | VLTNHMTAAWNGVDAAVCEDCLAPPTEHPCWQDLGEAYGGVELRRDERGQGYLVRLRNGATIHFRWGRPLRSRRME* |
Ga0070686_1009150612 | 3300005544 | Switchgrass Rhizosphere | VAGQFLCEVCFDTLTNHMTAVWNGVDAAVCEDCLAPSTEHPCWQELGEVYGGVELHRDERGQGYLVRLKNGATIHFRWGRPLRPRRMQ* |
Ga0066705_105372072 | 3300005569 | Soil | CFDTLTNHMTAAWNGVDIAVCEDCLAPPTDHACWQEVAEAYRGVELHRDERGQGYLVRLSNGATIHFRWDQPLRSRRMC* |
Ga0068859_1002562673 | 3300005617 | Switchgrass Rhizosphere | MPACLKVRRPIPQRTAEVAGQFLCEVCFDTLTNHMTAVWNGVDAAVCEDCLAPSTAHPCWQELGEVYGGVELHRDERGQGYLVRLKNGATIHFRWGRPLRPRRMK* |
Ga0066905_1001517671 | 3300005713 | Tropical Forest Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPAQHPCWQELGEAYGSVELRRDERGQGYRVRLRNGTMIHFRWGGPLRSRRR* |
Ga0066903_1001837564 | 3300005764 | Tropical Forest Soil | VAGQFLCEVCFDTLTNHMTAAWNGADIAVCEDCLAPPPDHACWQEVAEAYGGVELHRDERGQGYLVRLRTGATVHFRWGQPLRSRRLR* |
Ga0081455_100898571 | 3300005937 | Tabebuia Heterophylla Rhizosphere | KARRPMPQRTDEVAGQFLCEVCFDTLTNHMTAVWNGVDAAVCEDCLAPPTEHPCWQELGEAYGGVELRRDERGQGYLVRLRNGATIRFRWGRPLRSRRMS* |
Ga0081538_100035126 | 3300005981 | Tabebuia Heterophylla Rhizosphere | VAGQFLCEVCFDTLTNHMTAAWNGVDIAVCEDCLAPPTDHACWQELAEAYRGVELCRDECGQGYLVRLRNGAIIHFRWGQPLPSRRIR* |
Ga0081540_10684923 | 3300005983 | Tabebuia Heterophylla Rhizosphere | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPAQHPCWQELGEAYGSVELRRDERGQGYIVRLRNGTTIHFRWGRPLRSRRMS* |
Ga0066656_105951312 | 3300006034 | Soil | VAGQFLCEVCFDVLTNHTTAAWNGVDTAVCEDCLAPPPEHACWQELGEAYGGVELCRDERGQGYFVRLRNGATIHFRWGRPLRSRRME* |
Ga0075417_100934823 | 3300006049 | Populus Rhizosphere | VAGQFLCEVCFDALTNHMTAAWNGVDTAVCDDCLAPPAEHACWQELGEAYGGVELHRDEREQGYLVRLRNGATVRFRWGRPLRSRRIR* |
Ga0075028_1006325372 | 3300006050 | Watersheds | TNHMTAAWNGVDAAVCEDCLAPPTAHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRKMR* |
Ga0066658_103415102 | 3300006794 | Soil | MPACPKARRQTRQRVAEVAGQFLCEVCFDALTNHMTAAWNGVDIAVCEDCLAPPTDHACWQEVAEAYRGVELHRDERGQGYLVRLRNGATIHFRWDQPLRSRRMY* |
Ga0075421_1014150792 | 3300006845 | Populus Rhizosphere | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELCRGEHGQEYLVRLRNGATIHFRWGRPLRPRKMG* |
Ga0075430_1005806021 | 3300006846 | Populus Rhizosphere | KRLWPGLTPVCPKARQRTPERTPEVAGQFLCEVCFDALTNHMTAAWNGVDTAVCDDCLAPPAEHACWQELGEAYGGVELHRDEREQGYLVRLRNGATVRFRWGRPLRSRRIR* |
Ga0075420_1009658502 | 3300006853 | Populus Rhizosphere | DAGMPEGPPDMQRAGEVAGQFLCEVCFDTLTNHITAVWNGVDAAVCADCLAPPTEHPCWQELGEAYSGVELRRDVHGQSHLVRLRNGTTIHFRWDRPLRSRRMQ* |
Ga0075420_1010099462 | 3300006853 | Populus Rhizosphere | VAGQFLCEVCFDALTNHMTAAWNGVDTAVCDDCLAPPAEHPCWQELGEAYGGVELHRDEWEQGYLVRLRNGATVRFRWGRPLRSRRIR* |
Ga0075425_1025388062 | 3300006854 | Populus Rhizosphere | GLTPACPKARLKTPQRAGEVAGQFLCEVCFDTLTSHMTAVWNGVEAAVCDDCLAPPTEHACWQELGEAYGGVELCRDERGQGYLVRLRNGATIHFRWGRPLRSRRME* |
Ga0075434_1004565263 | 3300006871 | Populus Rhizosphere | VAGQFLCEVCFDALTNHMTAAWNGVDTAVCDDCLAPPAEHPCWQELGEAYGGVELHRDEWEQGYLVRLRNGATVHFRWGTPLRSRRLR* |
Ga0075434_1013943751 | 3300006871 | Populus Rhizosphere | NHMTAVWNGVDAAVCDDCLAPPTEHACWQELGEAYGGVELCRDERGQGYLVRLRNGATIHFRWGRPLRSRRME* |
Ga0075429_1000189292 | 3300006880 | Populus Rhizosphere | VAGQFLCEVCFDALTNHMTAAWNGVDTAVCDDCLAPPAEHACWQELGEAYGGVELHRDEREQGYLVRLRNGAMVHFRWGRPLRSRRIR* |
Ga0075424_1017270091 | 3300006904 | Populus Rhizosphere | KARQRTPERTPEVAGQFLCEVCFDALTNHMTAAWNEVETAVCDDCLAPPAEHACWQELGELYGGVELCRDERGQGYLVRLRNGATVHFRWGRPLRSRRIK* |
Ga0075424_1019580491 | 3300006904 | Populus Rhizosphere | VAGQFLCEVCFDALTNHMTAAWNEVDTAVCDDCLAPPAEHACWQELGEAYGGVELHRDEREQGYLVRLRNGATVHFRWGQPLRSRRIT* |
Ga0075419_100723414 | 3300006969 | Populus Rhizosphere | VAGQFLCEVCFDALTNHMTAAWNGLDTAVCDDCLAPPAEHACWQELGEAYGGVELHRDEREQGYLVRLRNGATVRFRWGRPLRSRRIR* |
Ga0075419_111310891 | 3300006969 | Populus Rhizosphere | KARQRTPERTPEVAGQFLCEVCFDALTNHMTTAWNEAETAVCDDCLAPPAEHACWQELGEAYGGVELHRDEREQGYLVRLRNGATVHFRWGQPLRSRRIT* |
Ga0099791_100953582 | 3300007255 | Vadose Zone Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDTAVCEDCLAPPTAHACWQELGEAYSGVELHRDERGQGYLVRLRNGATIHFRWDGPLRSRRMR* |
Ga0066710_1004150462 | 3300009012 | Grasslands Soil | VAGQFLCEMCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELRPNERGQGYLVRFKNGTTIHFRGSRAVRSRRTE |
Ga0066710_1010085993 | 3300009012 | Grasslands Soil | VAGQFLCEMCFDTLTNHMTAVWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELRRDEHGQGYLVRLRNGATIHFRWGRPLRSRGMR |
Ga0066710_1016840432 | 3300009012 | Grasslands Soil | GTYEVAGQFLCEMSFDMLTNHMTAAWNGVDAAVCEDCLAPPTEHPCWQELGEAYGGVELRRDEHGQGYLVCLRNGATIHFRWDQPLRSRRIC |
Ga0099827_100555344 | 3300009090 | Vadose Zone Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRRMC* |
Ga0099827_101122242 | 3300009090 | Vadose Zone Soil | VAGQFLCEVCFDVLTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELCPDERGEGYLVRFKNGTTIHFRWSRAVRSRRTE* |
Ga0075418_101178645 | 3300009100 | Populus Rhizosphere | VAGQFLCEVCFDTLTNHMTAVWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELCRGEHGQEYLVRLRNGATIHFRWGRPLRPRKMG* |
Ga0066709_1007709012 | 3300009137 | Grasslands Soil | VAGQFLCEMCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELRPNERGEGYLVRFKNGTTIHFRWSRAVRSRRTE* |
Ga0114129_101758922 | 3300009147 | Populus Rhizosphere | VAGQFLCEVCFDALTNHMTAAWNEAETAVCDDCLAPPAEHACWQELGEAYGGVELHRDEREQGYLVRLRNGATVHFRWGQPLRSRRIT* |
Ga0114129_122898191 | 3300009147 | Populus Rhizosphere | VAGQFLCEVCFDALTNHMTAAWNGVDTAVCDDCLAPPAEHPCWQELGEAYGGVELHRDEWEQGYLVRLRNGATVHFRWGRPLRSRRIR* |
Ga0111538_115963772 | 3300009156 | Populus Rhizosphere | VAGQFLCEVCFDALTNHMTAAWNGVDTAVCDDCLAPPAEHPCWQELGEAYGGVELHRDEWEQGYLVRLRNGATVHFRWGRPLRSRRIG* |
Ga0105252_101778983 | 3300009678 | Soil | VTGQFLCEVCFDTLTNHITAVWNGVDAAVCADCLAPPTEHPCWQELGEAYSGVELCRDGHGQRYLVRLRNGTTVHFRWGRPLRSRRM |
Ga0114944_11343181 | 3300009691 | Thermal Springs | MMAGQFLCEVCFDALTDHVTAVWNGLDTAVCDDCLAPPVGHPCWQELGGAAAVAELRVDGRGEGYLVRLRSGATLHFRWSKPLRSRDMGPESGERG* |
Ga0105070_10210582 | 3300009815 | Groundwater Sand | VAGQFLCEVCFDVLTNHITAVWNGLDTAVCEDCLAPPAEHACWQELGEVFGVAELRPDERGEGYLVRFKNGTTIHFRWSRAVRSRRTE* |
Ga0126315_109550582 | 3300010038 | Serpentine Soil | VAGQFLCEVCFDALTNHMTAAWNGVDAAICDDCLAPPAEHACWQELGEAYGGVELHRDEWEQGYLVRLRNGATVHFRWGRPLRSRRIR* |
Ga0126380_106691232 | 3300010043 | Tropical Forest Soil | VAGQFLCEVCFDALTNHMTAAWNGVDAAVCDDCLAPPAEHACWQELGEAYGGVELHRDERGQGYLVRLKNGATVHFRWGGPLRPRRMG* |
Ga0126380_107343063 | 3300010043 | Tropical Forest Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHPCWQELGEAYGGVELRRDEHGQGYLVRLRNGA |
Ga0126384_103666543 | 3300010046 | Tropical Forest Soil | VAGQFLCEVCFDALTNHMTAAWNGVDTAVCDDCLAPPAEHVCWQELGEAYGGVELHRDEWEQGYLVRLRNGATVHFRWGQPLRSRRIR* |
Ga0126384_105424183 | 3300010046 | Tropical Forest Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPAQHPCWQELGEAYGSVELRRDERGQGYLVRLRNGATIHFRWGRPLRSRRRR* |
Ga0126382_108166321 | 3300010047 | Tropical Forest Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDTAVCDDCLAPPPDHVCWQEVVEAYGGVELRRDERGQGYLVRLRTGATVHFRWGQPLRSRRMR* |
Ga0126370_107232612 | 3300010358 | Tropical Forest Soil | HMTAAWNGVDTAVCDDCLAPPPDHVCWQEVAEAYGGVELRRDERGQGYLVRLRTGATVHFRWGQPLRSRRMR* |
Ga0126376_102154622 | 3300010359 | Tropical Forest Soil | VAEQFLCEVCFDTLTNHMTAAWNGVDTAVCDDCLAPPPDHACWQEVAEAYGGVELRRDERGQGYLVRLRTGATVHFRWGQPLRSRRMR* |
Ga0126376_108202882 | 3300010359 | Tropical Forest Soil | VEGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPAQHPCWQELGEAYGSVELHRDERGQGYLVRLRNGATIHFRWGRPLRSRRR* |
Ga0126376_119127331 | 3300010359 | Tropical Forest Soil | SSELYLRRRYETDTTRANGGLTVPGQFLCEVCFDALTNHSTAVWNGFDTAVCEDCLAPPAEHACWQELGKAFEVAEVCRDERGEGYLVRFKNGTTIHFRWSRAVRSRKTE* |
Ga0126372_104881273 | 3300010360 | Tropical Forest Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDIAVCEDCLAPPPDHACWQEVAEAYSGVELRRDERGQGYLVRLRSGAMI |
Ga0126372_118016651 | 3300010360 | Tropical Forest Soil | VEGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPAQHPCWQELGEAYGSVELRRDERGQGYLVRLRNGATIHFRWGRPLRSRRR* |
Ga0126377_109829742 | 3300010362 | Tropical Forest Soil | GQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPAQHPCWQELEDAYGSVELHRDERGQGYLVRLRNGTTIHFRWGRPLRSRRR* |
Ga0126379_113669661 | 3300010366 | Tropical Forest Soil | VEGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPAQHPCWQELGEAYGSVELHRDERGQGYLVRLRNGTTIHFRWDRPLRSRRRR* |
Ga0126379_118510182 | 3300010366 | Tropical Forest Soil | VAGQFLCEVCFDALTNHMTAAWNGVETAVCDDCLAPPAEHACWQELGEAYGGVELHRDERDQGYLVRLRNGATVHFRWGRPLRSRRIT* |
Ga0126379_124567201 | 3300010366 | Tropical Forest Soil | KRLWSGLMPACPKARRQTRQRAAEVAGQFLCEVCFDTLTNHMTAAWNGADIAVCEDCLAPPPDHACWQEVAEAYGGVELRRDERGQGYLVRLRTGATVHFRWGQPLRSRRRR* |
Ga0136847_130353021 | 3300010391 | Freshwater Sediment | MAGKFLCELCHDALTDHMTEAWNGCDMAVCDDCLAPPARHACWQELGDPYGVADLRRDEQGAGYLVRLQSGATVHFRWHTPLPSRRTE* |
Ga0126383_104791651 | 3300010398 | Tropical Forest Soil | EVAGQFLCEVCFDTLTNHMTAAWNGVDIAVCEDCLAPPPDHACWQEVAEAYGGVELHRDERGQGYLVRLRTGATVHFRWSQPLRSRRMR* |
Ga0126383_110891602 | 3300010398 | Tropical Forest Soil | VAGQFLCEVCFDALTNHMTAAWNGVDTAVCDDCLAPPAEHVCWQELGEAYGGVELHRDEWEQGYLVRLRNGATVHFRWGQPLRSRRIT* |
Ga0126383_118400961 | 3300010398 | Tropical Forest Soil | VAGQFLCEVCFDTLTNHMTAAWNEVDIAVCEDCLAPPPDHACWQEVAEAYSGVELRRDERGQGYLVRLRNGAIIHFRWNRPLRSRRIG* |
Ga0134122_122067141 | 3300010400 | Terrestrial Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELCRSEHGQEYLVRLRNGATIHFRWGRPL |
Ga0137391_107694012 | 3300011270 | Vadose Zone Soil | ACPPARLKTRQRVGEVAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTAHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRRMC* |
Ga0137428_11882542 | 3300011432 | Soil | VAGQFLCEMCFDTLTNHITAVWNGVDAAVCADCLAPPTEHPCWQELGEAYSGVELRRDVHGQSHLVRLRNGTTVHFRWDRPLRSRRMQ* |
Ga0137388_108078242 | 3300012189 | Vadose Zone Soil | EVCFDTLTNHMTAVWNGVDTAVCEDCLAPPTEHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRRMC* |
Ga0137383_100638504 | 3300012199 | Vadose Zone Soil | VAGQFLCEVCFDMLTNHMTAAWNGVDAAVCEDCLAPPTEHPCWQELGEAYGGVELRRDEHGQGYLVCLRNGATIHFRWDQPLRSRRIC* |
Ga0137365_107039502 | 3300012201 | Vadose Zone Soil | VAGQFLCEVCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELCPDERGEGYLVRFKNGTTIRFRWSRAVRSRRTE* |
Ga0137399_103483992 | 3300012203 | Vadose Zone Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTAHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDGPLRSRRMR* |
Ga0137374_101236062 | 3300012204 | Vadose Zone Soil | VAGQFLCEVCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELRPDERGEGYLVRFKNGTTIHFRWSRAVRSRRTE* |
Ga0150985_1076440742 | 3300012212 | Avena Fatua Rhizosphere | VAGQFLCEVCFDTLTNHMTAVWNGVDAAVCEDCLAPSTEHPCWQELGEVYGGVELHRDERGQGYLVRLKNGATIHFRWGRPLRPRRMK* |
Ga0150985_1079857922 | 3300012212 | Avena Fatua Rhizosphere | VAGQFLCEVCFDALTNHMTVAWNGVDTAVCDDCLAPPAEHGCWQELGEAYGGVELHRDEREQRYLVRLRNGATVHFRWGRPLRARRIR* |
Ga0150985_1119204693 | 3300012212 | Avena Fatua Rhizosphere | VAGQFLCEVCFDALTNHMTAAWNGVDITVCEDCLAPPTDHACWQELAEAYSGVELHRDECGQGYLVRLRSGATIHFRWGQPLRSRRLR* |
Ga0137386_100919631 | 3300012351 | Vadose Zone Soil | VAGEFLCEVCFDMLTNHMTAAWNGVDAAVCEDCLAPPTEHPCWQELGEAYGGVELRRDEHGQGYLVCLRNGATIHFRWDQPLRSRRIC* |
Ga0137367_101399973 | 3300012353 | Vadose Zone Soil | VAGQFLCEVCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELCPDERGEGYLVRFKNGTTIRFRWSRAV |
Ga0137371_102999731 | 3300012356 | Vadose Zone Soil | VAGQFLCEMCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELRPDERGEGYLVRFKNGTTIHFRWSKAVRSRRTE* |
Ga0137360_107374152 | 3300012361 | Vadose Zone Soil | VAGQFLCEVCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELRPDEQGEGYLVRFKNGTTIHFRWSRAVRSRRTE* |
Ga0137361_106589022 | 3300012362 | Vadose Zone Soil | VAGQFLCEVCFDTLTNHITAVWNGLDTAVCEDCLAPPVEHACWQELGEAFGVAELCPDERGEGYLVRFKNGTTIRFRWSRAVRSRRTE* |
Ga0137390_111465821 | 3300012363 | Vadose Zone Soil | PACPPARLKTRQRVGEVAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRRMC* |
Ga0134035_10294691 | 3300012391 | Grasslands Soil | VAGQFLCEMCFDMLTNHMTAAWNGVDIAVCEDCLAPPTDHACWQEVAEAYRGVELHRDERGQGYLVRLSNGATIHFRWDQPLQSRRMC* |
Ga0150984_1235234702 | 3300012469 | Avena Fatua Rhizosphere | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPAQHPCWQELGEAYGSVELRRDKRGQGYIVRLRNGATVHFRWSRSLRSRRR |
Ga0137395_100085427 | 3300012917 | Vadose Zone Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTAHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRRMC* |
Ga0137359_107936932 | 3300012923 | Vadose Zone Soil | SSGLTPACPPARLKTLQRAGEVAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTAHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDGPLRSRRMR* |
Ga0137404_110803062 | 3300012929 | Vadose Zone Soil | VAGQFLCEVCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELCPDERGEGYLVRFKNGTTIHFRWSRAVRSRRTE* |
Ga0126375_112479682 | 3300012948 | Tropical Forest Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPAQHPCWQELGEAYGGVELHRDEREQGYLVRLRNGAMVHFRWGRPLRSRRIR* |
Ga0164300_110487941 | 3300012951 | Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDVAVCEDCLAPPAQHPCWQELGEAYGSVELRRDERGQGYLVRLKNGATIHFRWGRPLRPRRMK* |
Ga0126369_102424663 | 3300012971 | Tropical Forest Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDTAVCDDCLAPPPDHVCWQEVAEAYSSVELHRDERGQGYLVRFRTGATVHFRWGQPLRSRRLR* |
Ga0126369_103493733 | 3300012971 | Tropical Forest Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDIAVCEDCLAPPPDHVCWQEVAEAYGGVELRRDERGQGYLVRLRTGATVHFRWGQPLRSRRLR* |
Ga0163162_120278892 | 3300013306 | Switchgrass Rhizosphere | PTPQRTDEVAGQFLFEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPAQHPCWQELGEAYGSVELRRDKRGQGYIVRLRNGATIHFRWGRPLRSRRRS* |
Ga0157380_129911161 | 3300014326 | Switchgrass Rhizosphere | VAGQFLCEVCFDTLTNHITAVWNGVDAAVCADCLAPPPEHPCWQELGEAYSGVELCRDGHGQNHLVRLRNGTTIHF |
Ga0137409_1000513011 | 3300015245 | Vadose Zone Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTAHACWQELGEAYSGVELHRDERGQGYLVRFRNGATIHFRWDGPLRSRRMR* |
Ga0132258_100762817 | 3300015371 | Arabidopsis Rhizosphere | MDEVAGQFLCEVCFDTLTNHMTAAWNGVDTAVCEECLAPPTEHPCWQELREAYGGVELCHDECGQGYLVRLKSGATIHFRWDRPLRSRRVQ* |
Ga0132255_1031936192 | 3300015374 | Arabidopsis Rhizosphere | VAGQFLCEVCFDTLTNHMTAVWNGVDAAVCEDCLAPSTEHPCWQELGEVYGGVELHRDERGQGYLVRLRNGATIHFRWGRPLRSRRTG* |
Ga0182037_110447561 | 3300016404 | Soil | MAGQFLCEVCFDALTNHMTAAWNGVDTAVCDDCLAPPPDHVCWQEVAEAYGGVELRRDEHGQGYLVRLRNGAMIHFRWNRPLRSRRIG |
Ga0184633_102490192 | 3300018077 | Groundwater Sediment | VAGQFLCEVCFDALTNHTTTVWDGLDTAVCEDCLAPPAGHTCWQELGSASVGVELRFDERGDGYLIRLRSGATIHFRWGRPLPSRRTS |
Ga0184627_101124342 | 3300018079 | Groundwater Sediment | VAGQFLCEVCFDALTNHTTTVWDGLDTAVCEDCLAPPAGHTCWQELGSASVGVELRFDERGEGYLVRLRSGATIHFRWGRPLPSRRTS |
Ga0184648_10960892 | 3300019249 | Groundwater Sediment | VAGQFLCEVCFDALTNHTTAVWDGLDTAVCEDCLAPPAGHTCWQELGSASVGVELRFDERGDGYLIRLRSGATIHFRWGRPLPSRRTS |
Ga0184648_12387661 | 3300019249 | Groundwater Sediment | QFLCEVCFDMLTNHITAVWNGVDAAVCEDCLAPPTGHPCWQELGEAYSGVELHRNAHGQGYHVRLRNGATIHFRWGRPLRSRRMK |
Ga0184648_14479981 | 3300019249 | Groundwater Sediment | VAGQFLCEVCFDTLTNHITAVWNGVDAAVCEDCLAPPTEHPCWQELGEAYSGVELHRDAHGQGYLVRLRNGATIHFRWGRHLRSRRMK |
Ga0184646_10557893 | 3300019259 | Groundwater Sediment | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTAHACWQELGEAYGGVELHRDERGQGYLVRLRNGA |
Ga0184646_14106952 | 3300019259 | Groundwater Sediment | VAGQFLCEVCFDTLTNHITAVCEDCLAPPAEHACWQELGEAFGVAELRPDEQGEGYLVRFKNGTTIHFRWSRAVRSRRTE |
Ga0184642_16105522 | 3300019279 | Groundwater Sediment | VAGQFLCEVCFDVLTNHMTAVWNGLDMAVCEDCLAPPAEHTCWQELGEAFGVAKLCPDERGEGYLVRFKNGTTIHFRWSRAVRSRRTE |
Ga0194131_100560282 | 3300020193 | Freshwater Lake | VAGQFLCEICFDVLTNHSTAVWDGLDTAVCEDCLAPPEHHPCWQELGSAFSVAELRPDAQGDGYLVRLRNGRTIRFRWDGPLPSRRTQ |
Ga0179596_102075502 | 3300021086 | Vadose Zone Soil | VAGQFLCEVCFDTLTNHITAAWNGVDAAVCEDCLAPPTAHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDGPLRSRRMR |
Ga0179585_10521943 | 3300021307 | Vadose Zone Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTAHACWQELGEAYGGVELHLDERGQGYLVRFRNGATIHFRWDGPLR |
Ga0222625_16674222 | 3300022195 | Groundwater Sediment | VAGQFLCEVCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELCPDERGEGYLVRFKNGTTIRFRWSRAVRSRRTE |
Ga0212128_100870013 | 3300022563 | Thermal Springs | MAGQFLCEVCFDALTDHVTAVWNGLDTAVCDDCLAPPVGHPCWQELGGAAAVAELRVDGRGEGYLVRLRSGATLHFRWSKPLRSRDMGPESGERG |
(restricted) Ga0233424_103726001 | 3300023208 | Freshwater | FDALTNHMTTAWDGLDTAVCEDCLAPPPEHPCWQELGGACNVAELRPATQGGGYLVRLNNGATVRFRWDHPLRSRRDA |
Ga0207708_100633184 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | VAGQFLCEVCFDTLTNHMTAVWNGVDAAVCEDCLAPSTAHPCWQELGEVYGGVELHRDERGQGYLVRLKNGATIHFRWGRPLRPRRMQ |
Ga0209843_10093772 | 3300027511 | Groundwater Sand | VAGQFLCEVCFDVLTNHITAVWNGLDTAVCEDCLAPPAEHACWQELGEVFGVAELRPDERGEGYLVRFKNGTTIHFRWSRAVRSRRTE |
Ga0209689_13969071 | 3300027748 | Soil | VAGQFLCEVCFDALTNHMTAAWNGVDIAVCEDCLAPPTDHACWQELAEAYSGVELHRDECGQGYLVRLRTGATIHFRWGQPLRSRRLP |
Ga0209814_100817853 | 3300027873 | Populus Rhizosphere | VAGQFLCEVCFDALTNHMTAAWNGVDTAVCDDCLAPPAEHACWQELGEAYGGVELHRDEREQGYLVRLRNGATVRFRWGRPLRSRRIR |
Ga0209465_101848573 | 3300027874 | Tropical Forest Soil | TLEVAGQFLCEVCFDTLTNHMTAAWNGVDTAVCDDCLAPPPDHVCWQEVAEAYGGVELRRDERGQGYLVRLRTGATVHFRWSQPLRSRRMR |
Ga0209590_100598864 | 3300027882 | Vadose Zone Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRRMC |
Ga0209590_100896442 | 3300027882 | Vadose Zone Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHPCWQDLGEAYGGVDLRRDEHGQGYLVRLRNGATIHFRWGRPLRSRRME |
Ga0209590_103317572 | 3300027882 | Vadose Zone Soil | VAGQFLCEVCFDVLTNHSTAVWNGLDTAVCEDCLAPPVEHACWQELGEAFGVAELRPDEQGEGYLVRFKNGTTIHFRWSRAVRSRRTE |
Ga0209382_102064535 | 3300027909 | Populus Rhizosphere | AEVAGQFLCEVCFDALTNHMTAAWNGVDTAVCDDCLAPPAEHPCWQELGEAYGGVELHRDEWEQGYLVRLRNGATVHFRWGRPLRSRRIR |
Ga0137415_104279632 | 3300028536 | Vadose Zone Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDGPLRSRRMR |
Ga0247820_113183562 | 3300028597 | Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELCRGEHGQEYLVRLRNGATIHFRWGRPLRSRRLR |
Ga0247819_107542922 | 3300028608 | Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELCRGEHGQEYLVRLRNGATIHFRWGRPLRPRKMG |
Ga0247824_108498072 | 3300028809 | Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDVAVCEDCLAPPAQHPCWQELGEAYGSVELRRDKRGQGYIVRLRNGATVHFRWGRPLRSRRRR |
Ga0247647_10000142 | 3300030570 | Soil | VTGQFLCEVCFDTLTNHITAVWNGVDAAVCADCLAPPTEHSCWQELGEAYSGVELHRDGHGQSYLVRLRNGTTIHFRWDRPLRSRRMK |
Ga0308203_10637702 | 3300030829 | Soil | VAGQFLCEVCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELCPDERGEGYLVRFKNGTTIRFRWSRAVRSRRT |
Ga0308152_1107022 | 3300030831 | Soil | FDTLTNHITAAWSGVDAAVCEDCLAPPTDHACWQDLGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRRMC |
Ga0308202_10398012 | 3300030902 | Soil | KTLQRAGEVAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRRMC |
Ga0308202_11331732 | 3300030902 | Soil | PTVAGQFLCEVCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELCPDERGEGYLVRFKNGTTIRFRWSRAVRSRRTE |
Ga0308206_10094691 | 3300030903 | Soil | RHPPASAEPCARRRYGTDTTRANGGPTVAGQFLCEVCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELCPDERGEGYLVRFKNGTTIRFRWSRAVRSRRTE |
Ga0308154_1020881 | 3300030986 | Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFR |
Ga0308178_10142063 | 3300030990 | Soil | SGLTPACPPARLKTRQRVGEVAGQFLCEVCFDTLTNHMTAVWNGVDAAVCEDCLAPPTEHACWQDLGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRRMR |
Ga0308189_100932731 | 3300031058 | Soil | TTRANGGPTVAGQFLCEVCFDVLTNHMTAVWNGLDMAVCEDCLAPPAEHACWQELGEAFGVAKLCPDERGEGYLVRFKNGTTIHFRWSRAVRSRRTE |
Ga0308185_10104613 | 3300031081 | Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRRLRSRRMC |
Ga0308204_100155292 | 3300031092 | Soil | VAGQFLCEVCFDALTNHITAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELRPDERGEGYLVRFKNGTTIHFRWSRAVRSRRTE |
Ga0308197_100596651 | 3300031093 | Soil | VAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELHRDERGQGYLVRLRNGVTIHFRWDRPLQSRRMR |
Ga0308197_100610421 | 3300031093 | Soil | RHHPASAEPCVRRRYGTDTTRANGGPTVAGQFLCEVCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELCPDERGEGYLVRFKNGTTIRFRWSRAVRSRRTE |
Ga0308193_10693221 | 3300031096 | Soil | TRANGGPTVAGQFLCEVCFDVLTNHMTAVWNGLDMAVCEDCLAPPAEHTCWQELGEAFGVAKLCPDERGEGYLVRFKNGTTIHFRWSRAVRSRRTE |
Ga0308181_10147633 | 3300031099 | Soil | VAGQFLCEVCFDTLTNHMTAVWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRRMC |
Ga0308181_11787501 | 3300031099 | Soil | SGLTPACPPARLKTRQRVGEVAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRRLRSRRMC |
Ga0308187_102451781 | 3300031114 | Soil | RYGTDTTRANGGPTVAGQFLCEVCFDALTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELCPDERGEGYLVRFKNGTTIHFRWSRAVRSRRTE |
Ga0308194_100350172 | 3300031421 | Soil | LTNHSTAVWNGLDTAVCEDCLAPPAEHACWQELGEAFGVAELRPDEQGEGYLVRFKNGTTIHFRWSRAVRSRRTE |
Ga0308186_10109662 | 3300031422 | Soil | VAGQFLCEVCFDVLTNHITAVWNGLDTAVCEDCLAPPAEHACWQELGEGFGVAELRPDEQGEGYLVRFKNGTTIHFRWSRAVRSRRTE |
Ga0307407_112172361 | 3300031903 | Rhizosphere | QRVYEVAGQFLCEVCFDTLTNHMTAAWNGVDIAVCEDCLAPPPDHACWQALAEVYSGVELRRDERGQGYLVRLSNGATIHFRWGQPLRSRRMR |
Ga0306921_114117552 | 3300031912 | Soil | LEMAGQFLCEVCFDTLTNHMTAAWNGADIAVCEDCLAPPPDHACWQEVAEAYSGVELHRDERGQGYLVRLRTGATVHFRWGQPLRSRRMR |
Ga0306926_123352141 | 3300031954 | Soil | VAGQFLCEVCFDTLTNHMTAAWNGADIAVCEDCLAPPPDHACWQEVAEAYGGVELRRDERGQGYLVRLRTGATVHFRWGQPLRSRRMR |
Ga0310890_104948483 | 3300032075 | Soil | FDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELCRGEHGQEYLVRLRNGATIHFRWGRPLRPRKMG |
Ga0370545_007068_587_853 | 3300034643 | Soil | MAGQFLCEVCFDALTNHMTATWNGLDTAVCEDCLAPPAEHACWQELGETYGGVELRRDERGQGYLVRLRNGATIHFRWDRPLQSRRMG |
Ga0370545_019588_732_998 | 3300034643 | Soil | MAGQFLCEVCFDTLTNHMTAAWNGGDAAVCEDCLAPPTEHPCWQELGEAYGGVELRRDERGQGYLVRLKNGATIHFRWGRPLQSRRMR |
Ga0370545_035566_53_319 | 3300034643 | Soil | MAGQFLCEMCFDVLTNHMTAAWNGVDTAVCEDCLAPPTEHACWQDLGEAYGGVELHRDERGQGYLVRLKNGATIHFRWDRPLRSRRVG |
Ga0370548_005048_501_767 | 3300034644 | Soil | MAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTAHACWQELGEAYGGVELHRDERGQGYLVRLRNGATIHFRWDRPLRSRRMR |
Ga0370548_033280_503_769 | 3300034644 | Soil | MAGQFLCEVCFDVLTNHMTAVWNGLDMAVCEDCLAPPAEHACWQELGEAFGVAKLCPDERGEGYLVRFKNGTTIHFRWSRAVRSRRTE |
Ga0314780_006059_2_256 | 3300034659 | Soil | MAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPIEHACWQELGEAYGGVELCRGEHGQEYLVRLRNGATIHFRWGRPLRPR |
Ga0314782_020260_424_690 | 3300034661 | Soil | MAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELCRGEHGQEYLVRLRNGATIHFRWGRPLRPRKMG |
Ga0314784_037186_624_842 | 3300034663 | Soil | MAGQFLCEVCFDTLTNHITAVWNGVDAAVCADCLAPPPEHPCWQELGEAYSGVELCRDGHGQNHLVRLRNGTT |
Ga0314788_088017_177_443 | 3300034666 | Soil | MAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELCRGEHGQEYLVRLRNGATIHFRWGRPLRSRRLR |
Ga0314792_109065_1_318 | 3300034667 | Soil | TRVCLKARRPTPQRTDEVAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELCRGEHGQEYLVRLRNGATIHFRWGRPLRPRKMG |
Ga0314800_012974_59_325 | 3300034675 | Soil | MAGQFLCEVCFDTLTNHMTAAWNGVDVAVCEDCLAPPTEHACWQELGEAYGGVELCRGEHGQEYLVRLRNGATIHFRWGRPLRSRRLR |
Ga0314803_090057_39_302 | 3300034678 | Soil | MAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELCRGEHGQEYLVRLRNGTTIHFRWDRPLRSRRR |
Ga0370541_000802_134_400 | 3300034680 | Soil | MAGQFLCEVCFDTLTNHMTAAWNGVDAAVCEDCLAPPTEHACWQELGEAYGGVELRRDERGQGYLVRLRNGATIHFRWDRPLRSRRMC |
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