Metagenome / Metatranscriptome Family F039243

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039243
Family Type	Metagenome / Metatranscriptome
Number of Sequences	164
Average Sequence Length	60 residues
Representative Sequence	VYDMYHWDSSVPATEDTGNTSPAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQ
Number of Associated Samples	140
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.22 %
% of genes near scaffold ends (potentially truncated)	33.54 %
% of genes from short scaffolds (< 2000 bps)	78.05 %
Associated GOLD sequencing projects	129
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.268 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.537 % of family members)
Environment Ontology (ENVO)	Unclassified (31.707 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.780 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.62% β-sheet: 0.00% Coil/Unstructured: 77.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF00180	Iso_dh	58.54
PF01842	ACT	12.80
PF02826	2-Hacid_dh_C	8.54
PF01063	Aminotran_4	3.66
PF13231	PMT_2	1.22
PF08281	Sigma70_r4_2	1.22
PF06197	DUF998	0.61
PF01804	Penicil_amidase	0.61
PF08502	LeuA_dimer	0.61
PF14016	DUF4232	0.61
PF13384	HTH_23	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	7.32
COG0119	Isopropylmalate/homocitrate/citramalate synthases	Amino acid transport and metabolism [E]	0.61
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.61
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.27 %
All Organisms	root	All Organisms	45.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.27 %
cellular organisms	root	All Organisms → cellular organisms	45.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.27 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.27 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.27 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.49 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.22 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.61 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.49 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.44 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.22 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.22 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.49 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.22 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.22 %
Thermobispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermobispora	1.83 %
Rothia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia	0.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.49 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	1.22 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.22 %
Thermobispora bispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermobispora → Thermobispora bispora	1.83 %
Rothia mucilaginosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia mucilaginosa	0.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.27 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.49 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	1.22 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.22 %
Thermobispora bispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermobispora → Thermobispora bispora	1.83 %
Rothia mucilaginosa DY-18	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia mucilaginosa → Rothia mucilaginosa DY-18	0.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10375063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300004633\|Ga0066395_10096132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1418	Open in IMG/M
3300005176\|Ga0066679_10046658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2475	Open in IMG/M
3300005177\|Ga0066690_10502461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	816	Open in IMG/M
3300005332\|Ga0066388_100464858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1905	Open in IMG/M
3300005363\|Ga0008090_15395995	Not Available	538	Open in IMG/M
3300005363\|Ga0008090_15882851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1850	Open in IMG/M
3300005434\|Ga0070709_10001649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12104	Open in IMG/M
3300005435\|Ga0070714_100256172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1619	Open in IMG/M
3300005436\|Ga0070713_100040374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3793	Open in IMG/M
3300005437\|Ga0070710_10337724	Not Available	993	Open in IMG/M
3300005445\|Ga0070708_100067801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3206	Open in IMG/M
3300005467\|Ga0070706_100021495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5941	Open in IMG/M
3300005467\|Ga0070706_100504425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1126	Open in IMG/M
3300005471\|Ga0070698_100756470	Not Available	915	Open in IMG/M
3300005518\|Ga0070699_101906421	Not Available	543	Open in IMG/M
3300005533\|Ga0070734_10012929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5946	Open in IMG/M
3300005537\|Ga0070730_10040219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3450	Open in IMG/M
3300005537\|Ga0070730_10331049	Not Available	993	Open in IMG/M
3300005537\|Ga0070730_10535328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	751	Open in IMG/M
3300005541\|Ga0070733_10512098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	803	Open in IMG/M
3300005541\|Ga0070733_10954984	Not Available	576	Open in IMG/M
3300005541\|Ga0070733_10963618	Not Available	573	Open in IMG/M
3300005542\|Ga0070732_10986677	Not Available	515	Open in IMG/M
3300005586\|Ga0066691_10716030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300005602\|Ga0070762_10072218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1946	Open in IMG/M
3300005610\|Ga0070763_10376010	Not Available	795	Open in IMG/M
3300005764\|Ga0066903_103940060	Not Available	797	Open in IMG/M
3300005764\|Ga0066903_107820363	Not Available	549	Open in IMG/M
3300005921\|Ga0070766_10451386	Not Available	849	Open in IMG/M
3300006028\|Ga0070717_10494022	Not Available	1106	Open in IMG/M
3300006059\|Ga0075017_100690192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	785	Open in IMG/M
3300006175\|Ga0070712_101304495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	633	Open in IMG/M
3300006176\|Ga0070765_100442016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1218	Open in IMG/M
3300006804\|Ga0079221_10378426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	867	Open in IMG/M
3300006806\|Ga0079220_10184031	Not Available	1189	Open in IMG/M
3300006806\|Ga0079220_10851570	Not Available	699	Open in IMG/M
3300006854\|Ga0075425_101089925	Not Available	910	Open in IMG/M
3300006893\|Ga0073928_10328380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1140	Open in IMG/M
3300006914\|Ga0075436_100451613	Not Available	936	Open in IMG/M
3300006954\|Ga0079219_11399386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	625	Open in IMG/M
3300007076\|Ga0075435_100265742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1462	Open in IMG/M
3300009090\|Ga0099827_10137449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermobispora → Thermobispora bispora	1987	Open in IMG/M
3300010080\|Ga0127448_123879	Not Available	563	Open in IMG/M
3300010126\|Ga0127482_1106210	Not Available	700	Open in IMG/M
3300010154\|Ga0127503_11213061	Not Available	761	Open in IMG/M
3300010303\|Ga0134082_10293461	Not Available	680	Open in IMG/M
3300010358\|Ga0126370_11150722	Not Available	718	Open in IMG/M
3300010359\|Ga0126376_10063345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2672	Open in IMG/M
3300010361\|Ga0126378_13200882	Not Available	521	Open in IMG/M
3300010366\|Ga0126379_10510689	Not Available	1275	Open in IMG/M
3300010371\|Ga0134125_10135274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2744	Open in IMG/M
3300010376\|Ga0126381_102231302	Not Available	787	Open in IMG/M
3300010379\|Ga0136449_102560246	Not Available	729	Open in IMG/M
3300010396\|Ga0134126_10043978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5617	Open in IMG/M
3300010398\|Ga0126383_10378820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1445	Open in IMG/M
3300010866\|Ga0126344_1280649	Not Available	919	Open in IMG/M
3300010880\|Ga0126350_10953000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2794	Open in IMG/M
3300010880\|Ga0126350_11326048	Not Available	762	Open in IMG/M
3300010937\|Ga0137776_1522946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3525	Open in IMG/M
3300011270\|Ga0137391_10427525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1129	Open in IMG/M
3300012198\|Ga0137364_10522283	Not Available	893	Open in IMG/M
3300012199\|Ga0137383_10054609	Not Available	2860	Open in IMG/M
3300012201\|Ga0137365_10035434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3821	Open in IMG/M
3300012206\|Ga0137380_10010491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8392	Open in IMG/M
3300012207\|Ga0137381_10145151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermobispora → Thermobispora bispora	2039	Open in IMG/M
3300012209\|Ga0137379_10139644	Not Available	2328	Open in IMG/M
3300012210\|Ga0137378_10286000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1534	Open in IMG/M
3300012210\|Ga0137378_11296608	Not Available	644	Open in IMG/M
3300012285\|Ga0137370_10197490	Not Available	1179	Open in IMG/M
3300012351\|Ga0137386_10002241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	12412	Open in IMG/M
3300012371\|Ga0134022_1177117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1166	Open in IMG/M
3300012683\|Ga0137398_10006479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5609	Open in IMG/M
3300012971\|Ga0126369_10372026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1458	Open in IMG/M
3300016357\|Ga0182032_10266635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1338	Open in IMG/M
3300016357\|Ga0182032_11083428	Not Available	687	Open in IMG/M
3300016371\|Ga0182034_10998648	Not Available	723	Open in IMG/M
3300016422\|Ga0182039_11609795	Not Available	593	Open in IMG/M
3300018468\|Ga0066662_10912378	Not Available	863	Open in IMG/M
3300020199\|Ga0179592_10038242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2173	Open in IMG/M
3300020582\|Ga0210395_11383784	Not Available	513	Open in IMG/M
3300021088\|Ga0210404_10026950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2535	Open in IMG/M
3300021171\|Ga0210405_10306249	Not Available	1255	Open in IMG/M
3300021180\|Ga0210396_10112921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2453	Open in IMG/M
3300021402\|Ga0210385_11116393	Not Available	605	Open in IMG/M
3300021403\|Ga0210397_10530825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	894	Open in IMG/M
3300021403\|Ga0210397_10849307	Not Available	706	Open in IMG/M
3300021432\|Ga0210384_10281541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1497	Open in IMG/M
3300021474\|Ga0210390_10933228	Not Available	712	Open in IMG/M
3300021477\|Ga0210398_10105106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2293	Open in IMG/M
3300021478\|Ga0210402_10714483	Not Available	925	Open in IMG/M
3300021559\|Ga0210409_10243350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1630	Open in IMG/M
3300021560\|Ga0126371_11020324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	968	Open in IMG/M
3300021560\|Ga0126371_12110020	Not Available	679	Open in IMG/M
3300021560\|Ga0126371_13500470	Not Available	530	Open in IMG/M
3300021560\|Ga0126371_13614882	Not Available	522	Open in IMG/M
3300021860\|Ga0213851_1375947	Not Available	1185	Open in IMG/M
3300021861\|Ga0213853_10979677	Not Available	515	Open in IMG/M
3300022718\|Ga0242675_1005665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1366	Open in IMG/M
3300025898\|Ga0207692_11000499	Not Available	552	Open in IMG/M
3300025910\|Ga0207684_10013161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7160	Open in IMG/M
3300025915\|Ga0207693_10717715	Not Available	774	Open in IMG/M
3300025922\|Ga0207646_10383158	Not Available	1270	Open in IMG/M
3300025928\|Ga0207700_10176053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermobispora → Thermobispora bispora	1788	Open in IMG/M
3300027096\|Ga0208099_1059876	Not Available	539	Open in IMG/M
3300027725\|Ga0209178_1106297	Not Available	941	Open in IMG/M
3300027826\|Ga0209060_10009087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6158	Open in IMG/M
3300027857\|Ga0209166_10005404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8724	Open in IMG/M
3300027857\|Ga0209166_10289319	Not Available	863	Open in IMG/M
3300027874\|Ga0209465_10021733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2962	Open in IMG/M
3300027882\|Ga0209590_10190420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1292	Open in IMG/M
3300030969\|Ga0075394_11672589	Not Available	681	Open in IMG/M
3300031446\|Ga0170820_12732956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300031469\|Ga0170819_14648543	Not Available	932	Open in IMG/M
3300031543\|Ga0318516_10038081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2571	Open in IMG/M
3300031544\|Ga0318534_10112774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1560	Open in IMG/M
3300031544\|Ga0318534_10221078	Not Available	1093	Open in IMG/M
3300031544\|Ga0318534_10262286	Not Available	996	Open in IMG/M
3300031546\|Ga0318538_10106036	Not Available	1456	Open in IMG/M
3300031640\|Ga0318555_10008918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4325	Open in IMG/M
3300031680\|Ga0318574_10045064	Not Available	2299	Open in IMG/M
3300031681\|Ga0318572_10226750	Not Available	1096	Open in IMG/M
3300031708\|Ga0310686_102300232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300031713\|Ga0318496_10026334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2912	Open in IMG/M
3300031719\|Ga0306917_10555964	Not Available	902	Open in IMG/M
3300031723\|Ga0318493_10099429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1457	Open in IMG/M
3300031723\|Ga0318493_10291218	Not Available	879	Open in IMG/M
3300031723\|Ga0318493_10903871	Not Available	500	Open in IMG/M
3300031736\|Ga0318501_10207478	Not Available	1027	Open in IMG/M
3300031748\|Ga0318492_10594392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	590	Open in IMG/M
3300031764\|Ga0318535_10272566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Rothia → Rothia mucilaginosa → Rothia mucilaginosa DY-18	757	Open in IMG/M
3300031765\|Ga0318554_10325977	Not Available	873	Open in IMG/M
3300031769\|Ga0318526_10137437	Not Available	991	Open in IMG/M
3300031771\|Ga0318546_10256021	Not Available	1205	Open in IMG/M
3300031777\|Ga0318543_10156216	Not Available	1004	Open in IMG/M
3300031793\|Ga0318548_10560793	Not Available	556	Open in IMG/M
3300031798\|Ga0318523_10151271	Not Available	1154	Open in IMG/M
3300031798\|Ga0318523_10265895	Not Available	857	Open in IMG/M
3300031805\|Ga0318497_10345892	Not Available	830	Open in IMG/M
3300031819\|Ga0318568_10042009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2605	Open in IMG/M
3300031835\|Ga0318517_10019911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2571	Open in IMG/M
3300031860\|Ga0318495_10019604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2891	Open in IMG/M
3300031880\|Ga0318544_10356578	Not Available	568	Open in IMG/M
3300031910\|Ga0306923_11049299	Not Available	882	Open in IMG/M
3300031912\|Ga0306921_10617001	Not Available	1253	Open in IMG/M
3300031912\|Ga0306921_10818690	Not Available	1062	Open in IMG/M
3300031912\|Ga0306921_12022237	Not Available	613	Open in IMG/M
3300031941\|Ga0310912_10253792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1354	Open in IMG/M
3300031945\|Ga0310913_10376912	Not Available	1006	Open in IMG/M
3300032001\|Ga0306922_10399901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1471	Open in IMG/M
3300032009\|Ga0318563_10021546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3145	Open in IMG/M
3300032035\|Ga0310911_10537757	Not Available	678	Open in IMG/M
3300032039\|Ga0318559_10460249	Not Available	593	Open in IMG/M
3300032041\|Ga0318549_10106459	Not Available	1227	Open in IMG/M
3300032043\|Ga0318556_10117452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1357	Open in IMG/M
3300032043\|Ga0318556_10589698	Not Available	580	Open in IMG/M
3300032054\|Ga0318570_10251429	Not Available	801	Open in IMG/M
3300032065\|Ga0318513_10295875	Not Available	786	Open in IMG/M
3300032066\|Ga0318514_10052579	Not Available	1975	Open in IMG/M
3300032068\|Ga0318553_10007474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4641	Open in IMG/M
3300032076\|Ga0306924_10397980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	1577	Open in IMG/M
3300032094\|Ga0318540_10414994	Not Available	650	Open in IMG/M
3300032180\|Ga0307471_101151773	Not Available	941	Open in IMG/M
3300033290\|Ga0318519_10832470	Not Available	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.17%
Host-Associated	Host-Associated	1.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.51%
Aquatic	Environmental → Aquatic	3.66%
Plants	Host-Associated → Plants	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.51%
Freshwater	Environmental → Aquatic → Freshwater	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.22%
Sediment	Environmental → Aquatic → Sediment	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.05%
Loam	Environmental → Terrestrial → Soil → Loam	16.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.22%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.22%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.22%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.22%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.61%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.61%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.83%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.22%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.22%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.22%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.61%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.61%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010080	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_103750632	3300003505	Forest Soil	VYDMYHWDSSVPATEDSGDTGRAPARASSRPAAAAQAVQVALDRRDNGGDASHPRDQSG
Ga0066395_100961322	3300004633	Tropical Forest Soil	VYDMYPWDSSAQATKDTGNTRQARARARRPAAAAQAVQVALDRRDNGGDASDPRNQFGRGGGAG*
Ga0066679_100466582	3300005176	Soil	VYDMYHWDSAVPATEETGETSRARARASSRPMAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0066690_105024612	3300005177	Soil	VYDMYHWDSSVPATEEAGETSRARARASSRPMAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0066388_1004648582	3300005332	Tropical Forest Soil	VYDMYHWDSSAQATEDTGNTRQARSRARRPAAAAQAVQVALDRRDNGGDVSDPRDQFGPGGGVR*
Ga0008090_153959952	3300005363	Tropical Rainforest Soil	VYDMYHWDSSAQATEDTGNTSRAPARASRPSAAAQAIQVALDRRDNGGDASDPRDQ*
Ga0008090_158828512	3300005363	Tropical Rainforest Soil	VYDMYHWDTSVPATEDTGDAGPARGRASRRPVAAAQAVQVALDRRDNGGDASGRRDQ*
Ga0070709_100016495	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDRSVPATEDTGHTSPAPARAGRPAAAAQAVQVALDRRDNGGDASDPRDYQ*
Ga0070714_1002561722	3300005435	Agricultural Soil	VYDMYHWDSSVPATEDTGNTSQARARASRPSTAVQAVQVALDRRDNGGDASDPRGQ*
Ga0070713_1000403743	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDRSVPATEDTGSARPDPARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGVG*
Ga0070710_103377241	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDRSVPATEDTGNTSTAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0070708_1000678013	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDRSVPATEDTGNARPDPARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGAG*
Ga0070706_1000214955	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDSSAQATEDSGDTGRARATGSRPAAAAQAVQVALDRRDNGGDAGDPRDQFGRGGGVG*
Ga0070706_1005044252	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDSSVPATEDTGNSGQERARANRPAAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0070698_1007564702	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDRSVPATEDTGNARPDPARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGVG*
Ga0070699_1019064211	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDRSVPATEDTGSARPDPARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGAG*
Ga0070734_100129292	3300005533	Surface Soil	MRFTRQERSVVYDMYHWDSSVPATEDTGNTGQARARASRPSAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0070730_100402193	3300005537	Surface Soil	VYDMYHWDSSVPATEDTGDASPARARASSRPAAAARAVQVALDRRDNGGDATGTRDQ*
Ga0070730_103310491	3300005537	Surface Soil	MYHWDSSVPAPEDTGDTSPARARASGRPAAAARAVQVALDRRDNGGDATGTRDQ*
Ga0070730_105353281	3300005537	Surface Soil	EETGEASQARARASSPPMTAAQAVQVALDRRDNGGDAGRPRDQRGRARDGGVRYQ*
Ga0070733_105120982	3300005541	Surface Soil	LIRRSVVYDMYHWDRSVPATEDSGDTRRTPARASSRPAAAAQAVQVALDRRDNGGDAGGSGDQPG*
Ga0070733_109549842	3300005541	Surface Soil	VYDMYHWDRSVPATEDSGGTRRAPARASSRPAAAAQAVQVALDRRDNG
Ga0070733_109636181	3300005541	Surface Soil	VYDMYHWDSSVPATEDSGDTGRAPARASNRPAAAAQAVQVALDRRDNGGDASNPRDQSGWGGGFR*
Ga0070732_109866771	3300005542	Surface Soil	VYDMYHWDSSVPATEDTGNTSPAPARASRPAAAARAVQVALDRRDNGGDARDPRDQ*
Ga0066691_107160302	3300005586	Soil	VYDMYHWDSSVPATKETGETSRARARAGRRPLAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0070762_100722182	3300005602	Soil	VYDMYHWDRSVPATEDTGDTSPAPARASRPAAAAQAVQVALDRRDNGGDASDPRD*
Ga0070763_103760101	3300005610	Soil	VYDMYHWDRSVPATEDTGNTSPAPARASRPAAAAQAVQVALDRRDNGGDASDPRD*
Ga0066903_1039400601	3300005764	Tropical Forest Soil	VYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDASNARDQ*
Ga0066903_1078203632	3300005764	Tropical Forest Soil	VYDMYYWDSSAQATEDTGNTSSAPARARRPAAAAQAVQVALDRRDNGGDASDPRYQ*
Ga0070766_104513861	3300005921	Soil	VYDMYHWDRSVPATEDTGETSASRATSRRPAAAAQAVQVALDRRDNGGDARDPRDQ*
Ga0070717_104940222	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDSSVPATEDSGDAGRARARGTGSRPPAAAQAVQVALDRRDNGGDARGPRDQ*
Ga0075017_1006901922	3300006059	Watersheds	VYDMYHWDRSVPATEDTGNTSPAPAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGVRYQ*
Ga0070712_1013044951	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDRSVPATEDTGNTSPAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0070765_1004420162	3300006176	Soil	VYDMYHWDRSVPATEDTGETSASRAAGRRPAAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0079221_103784262	3300006804	Agricultural Soil	VYDMYHWDSSVPATEDTGNSGQARARASRPAAAAHAVQVALDRRDNGGDATDPRDQ*
Ga0079220_101840311	3300006806	Agricultural Soil	VYDMYHWDSSAQATKDTGNTRQARARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGAG*
Ga0079220_108515701	3300006806	Agricultural Soil	VYDMYHWDSSVPATEDTGNNGQARARASRPAAAAQAVQVALDRRDNGGDADPRDQFGRGGGAGNQ*
Ga0075425_1010899252	3300006854	Populus Rhizosphere	MGRSVVYDMYHWDRSVPATEDTGNGRPDPARARRAGAQAVQVALDRRDNGGDASDQFGRGGGAGYQ*
Ga0073928_103283801	3300006893	Iron-Sulfur Acid Spring	VYDMYHWDRSVPATEDTGETSATPAASRRPAAAAQAVQVALDRRDNGGDARDPRDQ*
Ga0075436_1004516132	3300006914	Populus Rhizosphere	MYHWDRSVPATEDTGNGRPDPARARRAGAQAVQVALDRRDNGGDASDQFGRGGGAGYQ*
Ga0079219_113993862	3300006954	Agricultural Soil	VYDMYHWDSSVPATEKNGETSPARARASSRPMAAAQAVQVALDRRDNGGDASNSRDQ*
Ga0075435_1002657422	3300007076	Populus Rhizosphere	VYDMYHWDSSAQAAEDTGNTSQARARASRPAAAAQAVQVALDRRDNGGDASDQFGRGGGAGYQ*
Ga0099827_101374492	3300009090	Vadose Zone Soil	MIRRRVVYDMYHWDSSVPATEENGETSRARARAGSRPMAAAQAVQVALDRRDNGGDVGDPRDQ*
Ga0127448_1238792	3300010080	Grasslands Soil	MYHWDSSAQATEDTGNTGQARARAHRPAAAAQAVQVALDRRDNGGDASDPRD
Ga0127482_11062102	3300010126	Grasslands Soil	MYYWDSSAQATEDTGNTSQARARAHRPAAAAQAVQVALDRRDNGGDASDPRDQIGRGGGD
Ga0127503_112130611	3300010154	Soil	VYDMYHWDSSVPATEDTGNTSPAPARASRAAAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0134082_102934611	3300010303	Grasslands Soil	MYHWDSSAQAAEDTGNTNQARARASRPAAAAQAVQVALDRRDNGGD
Ga0126370_111507221	3300010358	Tropical Forest Soil	VYDMYHWDSSAQATKDTGNTRQARARARRPAAAAQAVQVALDRRDNGGDASDPRDQLGRGGGVC*
Ga0126376_100633453	3300010359	Tropical Forest Soil	MYHWDSSAQATKDTGNTRQARARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGAGSQ*
Ga0126378_132008822	3300010361	Tropical Forest Soil	MYPWDSSAQATKDTGNTRQARARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGAGY*
Ga0126379_105106891	3300010366	Tropical Forest Soil	MYPWDSSAQATKDTGNTRQARARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGR
Ga0134125_101352742	3300010371	Terrestrial Soil	MYHWDRSVPATEDTGHTSPAPARAGRPAAAAQAVQVALDRRDNGGDASDPRDYQ*
Ga0126381_1022313021	3300010376	Tropical Forest Soil	VYDMYHWDSSAQATEDTGNTSSAPARARRPAAAAQAVQVALDRRDNGGDASDPRDQLGRGGGVC*
Ga0136449_1025602461	3300010379	Peatlands Soil	VYDMYHWDSSVPATEDSGDTGRAPARASSRPAAAAQAVQVALDRRDNGGDAGDPRDQSG*
Ga0134126_100439783	3300010396	Terrestrial Soil	MYHWDRSVPATEDTVHASPAPDRAGRPAAAAQAVQVALDRRDNGGDASDPRDYQ*
Ga0126383_103788202	3300010398	Tropical Forest Soil	VYDMYPWDSSAQATKDTGNTRQARARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGAGY*
Ga0126344_12806491	3300010866	Boreal Forest Soil	MYHWDRSVPATEDTGNTSPAPARASRPAAAAQAVQVALDRRDNGGDDSDPRD*
Ga0126350_109530003	3300010880	Boreal Forest Soil	VYDMYHWDRSVPATEDSGNTSPAPARASRPAAAAQAVQVALDRRDNGGDASDPRD*
Ga0126350_113260482	3300010880	Boreal Forest Soil	MYHWDRSVPATEDTGETSATRAASRRPAAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0137776_15229462	3300010937	Sediment	MYHWDRSVPATEDTGNTSKAHARASRPAAAARAVQVALDRRDNGGDASEARDQ*
Ga0137391_104275252	3300011270	Vadose Zone Soil	MYHWDRSVPATEDTGNTSPAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQSERGGGVSYQ*
Ga0137364_105222831	3300012198	Vadose Zone Soil	MYYWDSSAQATEDTGNTSQARARAHRPAAAAQAVQVALDRRDNGGDASDPRDQIGRGGGA
Ga0137383_100546093	3300012199	Vadose Zone Soil	MIRRSAVYDMYLWDSSVPTTEETGETSRARARASSRPMAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0137365_100354344	3300012201	Vadose Zone Soil	MIRRSVVYDMYHWDSSVPATEQTGETSRARARASSRPMAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0137380_1001049111	3300012206	Vadose Zone Soil	MIRRSVVYNMYHWDSSVPATEQTGETSRARARASSRPMAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0137381_101451511	3300012207	Vadose Zone Soil	MYHWDSSVPATEQTGETSRARARASSRPMAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0137379_101396441	3300012209	Vadose Zone Soil	MIRRSAVYDMYHWDSSVPTTEETGETSRARARAGSRPVAAAQAVQVALDRRDNGGDARD
Ga0137378_102860002	3300012210	Vadose Zone Soil	MYHWDRSVLATEDTGNTSLAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGVSYQ*
Ga0137378_112966081	3300012210	Vadose Zone Soil	MIRRRVVYDMYHWDSSVPATEEAGETSRARARASSRPMAAAQAVQVALDRRDNGGDASDPRDQ*
Ga0137370_101974901	3300012285	Vadose Zone Soil	MYHWDSSAQATEDTGNTGQARARAHRPAAAAQAVQVALDRRDNGGDASDPRDQIGRGGGA
Ga0137386_1000224110	3300012351	Vadose Zone Soil	MIRRSVVYNMYHWDSSVPATEQTGETSRARARASSRPMAAAQAVQVALDRRDNGGDASDPRD
Ga0134022_11771171	3300012371	Grasslands Soil	MYYWDSSAQATEDTGNTSQARARAHRPAAAAQAVQVALDRRDNGGDASGPRDQFGRGGGAG*
Ga0137398_100064792	3300012683	Vadose Zone Soil	VYDMYHWDRSVPATEDTGNTSPAPARASRPAAAAQAVQVAMDRRDNGGDASDPRD*
Ga0126369_103720262	3300012971	Tropical Forest Soil	MYHWDSSAQATEDTGNTRQARARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGAGY*
Ga0182032_102666352	3300016357	Soil	VYDMYHWDSSVPATEDTGDAGPARGGASRRPMAAAQAVQVALDRRDNGGDASNARDQ
Ga0182032_110834282	3300016357	Soil	VYDMYYWDSSAQATEDTGNTSSATARARRPAAAAQAVQVALDRRDNGGDAGDPRDQLGRGGGVC
Ga0182034_109986482	3300016371	Soil	VYDMYHWDSSAQATEDTGNTTQARARASRPPAAAQAVQEALDRRDNGGDASDPRYQ
Ga0182039_116097951	3300016422	Soil	MYHWDSSVPATEDTGDTSPARGRASRRPPAAAQAVQVALDRRDNGGDASGLRDQ
Ga0066662_109123781	3300018468	Grasslands Soil	VYDMYHWDSSVPATEDTGNSGQERARANRPAAAAQAVQVALDRRDNGGDASDPRDQ
Ga0179592_100382423	3300020199	Vadose Zone Soil	VYDMYHWDRSVPATEDTGNTSPAPARASRPAAAAQAVQVALDRRDNGGDASDPRD
Ga0210395_113837841	3300020582	Soil	VYDMYHWDSSVPATEDSGDTGRAPARASSRPAAAAQAVQVALDRRDNGGDASHPRDQSGWGGGFR
Ga0210404_100269502	3300021088	Soil	VYDMYHWDSSVPATEDSGDTGRAPARASSRPAAAAQAVQVALDRRDNGGDASNPRDQSGWGGGFR
Ga0210405_103062492	3300021171	Soil	VYDMYHWDSSVPATEDSGDTGRAPARASSRPAAAAQAVQVALDRRDNGGDASDPRDQSGWGGGFR
Ga0210396_101129211	3300021180	Soil	VYDMYHWDSSVPATEDSGDTGRAPARASSRPAAAAQAVQVALDRRDNGGDASDPRDQSG
Ga0210385_111163931	3300021402	Soil	VYDMYHWDSSVPATEDSGDTGRARARASSRPAAAAQAVQVALDRRDNGGDASDPRDQSGRGGGARSQ
Ga0210397_105308252	3300021403	Soil	VYDMYHWDRSVPATEDTGNTSPDPARASRPAAAAQAVQVALDRRDNGGDASDPRDQ
Ga0210397_108493072	3300021403	Soil	VYDMYHWDSSVPATEDSGDTGRAPGRASSRPAAAAQAVQVALDRRDNGGDASDPRDQSGWGGGFR
Ga0210384_102815412	3300021432	Soil	VYDMYHWDRSVPATEDTGETSASPATSRRPAAAAQAVQVALDRRDNGGDARDPRDQ
Ga0210390_109332282	3300021474	Soil	YDMYHWDSSVPATEDSGDTGRAPARASSRPAAAAQAVQVALDRRDNGGDASHPRDQSGWGGGFR
Ga0210398_101051063	3300021477	Soil	VPATEDSGDTGRAPARASSRPAAAAQAVQVALDRRDNGGDASDPRDQPG
Ga0210402_107144832	3300021478	Soil	MGRSVVYDMYHWDRSVPATEDTGNGRPDPARARRAAAQAVQVALDRRDNGGDASDPRDYQ
Ga0210409_102433502	3300021559	Soil	VYDMYHWDRSVPATEDTGETSPSRATSRRPAAAAQAVQVALDRRDNGGDARDPRDQ
Ga0126371_110203242	3300021560	Tropical Forest Soil	VYDMYYWDSSAQATEDTGNTSSAPARARRPAAAAQAVQVALDRRDNGGDASDPRYQ
Ga0126371_121100202	3300021560	Tropical Forest Soil	VYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDASNARDQ
Ga0126371_135004702	3300021560	Tropical Forest Soil	VYDMYPWDSSAQATKDTGNTRQARARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGAGY
Ga0126371_136148821	3300021560	Tropical Forest Soil	VYDMYHWDSSAQATEDTGNTSSAPARARRPAAAAQAVQVALDRRDNGGDASDPRYQ
Ga0213851_13759471	3300021860	Watersheds	VYDMYHWDSSVPATEDTGNTSPAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQ
Ga0213853_109796772	3300021861	Watersheds	VYDMYHWDRSVPATEDTGNTSPAPAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGVRYQ
Ga0242675_10056652	3300022718	Soil	VYDMYHWDRSVPATEDTGNTSPAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGVSYQ
Ga0207692_110004992	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDRSVPATEDTGNTSTAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQ
Ga0207684_100131615	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDSSAQATEDSGDTGRARATGSRPAAAAQAVQVALDRRDNGGDAGDPRDQFGRGGGVG
Ga0207693_107177152	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDSSVPATEDTGNTSQARARASRPSTAVQAVQVALDRRDNGGDASDPRGQ
Ga0207646_103831581	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDRSVPATEDTGNARPDPARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGAG
Ga0207700_101760533	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VYDMYHWDRSVPATEDTGSARPDPARARRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGVG
Ga0208099_10598761	3300027096	Forest Soil	VYDMYHWDSSVPATEDSGDTGRAPARASSRPAAAAQAVQVALDRRDNG
Ga0209178_11062972	3300027725	Agricultural Soil	VYDMYHWDSSVPATEDTGNNGQARARASRPAAAAQAVQVALDRRDNGGDADPRDQFGRGGGAGNQ
Ga0209060_100090872	3300027826	Surface Soil	MRFTRQERSVVYDMYHWDSSVPATEDTGNTGQARARASRPSAAAQAVQVALDRRDNGGDASDPRDQ
Ga0209166_100054046	3300027857	Surface Soil	MYHWDSSVPATEDTGDASPARARASSRPAAAARAVQVALDRRDNGGDATGTRDQ
Ga0209166_102893192	3300027857	Surface Soil	SAVPATEETGEASQARARASSPPMTAAQAVQVALDRRDNGGDAGRPRDQRGRARDGGVRY
Ga0209465_100217332	3300027874	Tropical Forest Soil	VYDMYPWDSSAQATKDTGNTRQARARARRPAAAAQAVQVALDRRDNGGDASDPRNQFGRGGGAG
Ga0209590_101904202	3300027882	Vadose Zone Soil	VYDMYHWDSSVPATEENGETSRARARAGSRPMAAAQAVQVALDRRDNGGDVGDPRDQ
Ga0075394_116725892	3300030969	Soil	VYDMYHWDSSVPATEDTGNTSQAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQFGRGGGAGYQ
Ga0170820_127329562	3300031446	Forest Soil	VYDMYHWDSSVPATEDTGNTSQAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQ
Ga0170819_146485432	3300031469	Forest Soil	VYDMYHWDSSVQATEDTGNTSQAPARASRPAAAAQAVQVALDRRDNGGDASDPRDQ
Ga0318516_100380811	3300031543	Soil	VYDMYHWDSSVPATEDTGDTSPARGRASRRPPAAAQAVQVALDRRDNGGDASGLRDQ
Ga0318534_101127742	3300031544	Soil	VYDMYHWDSSVPATEDIGNTSPAPARASRPAAAVQAVQVALDRRDNGGDASDPRDQ
Ga0318534_102210782	3300031544	Soil	VYDMYYWDSSVPATEDTGNGSQARARASRPAAAARAVQVALDRRDNGGDASDPRDQFGRGGGAGYQ
Ga0318534_102622861	3300031544	Soil	PAARYGCRALAEGLLVRRRSVVYDMYHWDSSVPATEDTGDTSPARGRASRRPPAAAQAVQVALDRRDNGGDASGLRDQ
Ga0318538_101060362	3300031546	Soil	VYDMYHWDSSAQATEDTRNTSQARARASRPAAAAQAVQVALDRRDNGGDASDPRDQ
Ga0318555_100089181	3300031640	Soil	PAARYGCRALAEGLLIRRRSIVYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDAGNARDQ
Ga0318574_100450641	3300031680	Soil	VYDMYHWDSSAQATEDTGNTRQARARARRPAAAAQAVQIALDRRDNGGDASD
Ga0318572_102267501	3300031681	Soil	VYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDASGLRDQ
Ga0310686_1023002322	3300031708	Soil	VYDMYHWDSSVPATEDSGDTGRAPARASSRPAAAAQAVQVALDRRDNGGDASDPRDQ
Ga0318496_100263344	3300031713	Soil	AEGLLIRRRSVVYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDASNARDQ
Ga0306917_105559642	3300031719	Soil	VYDMYHWDSSAQATEDTGNTRQARARARRPAAAAQAVQIALDRRDNGGDASDPRNQFGRGGGAG
Ga0318493_100994291	3300031723	Soil	VYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDAGNARDQ
Ga0318493_102912181	3300031723	Soil	VTRQERSVVYDMYHWDSSVPATEDIGNTSPAPARASRPAAAVQAVQVALDRRDNGGDASDPRDQ
Ga0318493_109038712	3300031723	Soil	MYHWDSSVPATEDTGDTSPARGRASRRPPAAVQAVQVALDRRDNGGDASGLRDQ
Ga0318501_102074781	3300031736	Soil	LVRRRSVVYDMYHWDSSVPATEDTGDTSPARGRASRRPAAAAQAVQVALDRRDNGGDASNARDQ
Ga0318492_105943921	3300031748	Soil	YWDSSVPATEDTGNGSQARARASRPAAAARAVQVALDRRDNGGDASDPRDQFGRGGGAGY
Ga0318535_102725662	3300031764	Soil	MYHWDSSVPATEDIGNTSPAPARASRPAAAVQAVQVALDRRDNGGDASDPRDQ
Ga0318554_103259771	3300031765	Soil	VYDMYHWDSSVPATEDTGDTSPARGRASRRPAAAAQAVQVALDRRDNGGDA
Ga0318526_101374371	3300031769	Soil	DRPAARYGCRALAEGLLIRRRSVVYDMYHWDSSVPATEDTGDTSPARGRASRRPPAAAQAVQVALDRRDNGGDASGLRDQ
Ga0318546_102560212	3300031771	Soil	VYDMYHWDSSAQATEDTGNTRQARARARRPAAAAQAVQIALDRRDNGGDASDPRN
Ga0318543_101562162	3300031777	Soil	LVRRRSVVYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDASNARDQ
Ga0318548_105607932	3300031793	Soil	RYGCRALAEGLLIRRRSVVYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDAGNARDQ
Ga0318523_101512712	3300031798	Soil	VYDMYHWDSSAQATEDTGNTRQARARARRPAAAAQAVQIALDRRDNGGDAS
Ga0318523_102658952	3300031798	Soil	EGLLIRRRSVVYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDASNARDQ
Ga0318497_103458922	3300031805	Soil	LIRRRSIVYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDASNARDQ
Ga0318568_100420093	3300031819	Soil	DRPAARYGCRALAEGLLIRRRSVVYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDAGNARDQ
Ga0318517_100199113	3300031835	Soil	VYDMYHWDSSAQATEDTGNTRQARARARRPAAAAQAVQIALDRRDNGG
Ga0318495_100196041	3300031860	Soil	VYDMYHWDSSAQATEDTGNTRQARARARRPAAAAQAVQIALDRRDNGGDASDPRYQFG
Ga0318544_103565781	3300031880	Soil	SSAQATEDTGNTTQARARASRPPAAAQAVQEALDRRDNGGDASDPRYQ
Ga0306923_110492992	3300031910	Soil	RSVVYDMYHWDSSVPATEDTGDTSPARGRASRRPPAAAQAVQVALDRRDNGGDASGLRDQ
Ga0306921_106170012	3300031912	Soil	VYDMYHWDSSVPATEDTGDTSPARGRASRRPPAAVQAVQVALDRRDNGGDASGLRDQ
Ga0306921_108186901	3300031912	Soil	ARYGCRALAEGLLIRRRSVVYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDASNARDQ
Ga0306921_120222371	3300031912	Soil	VYDMYYWDSSVPATEDTGNGSQARARASRPAAAARAVQVALDRRDNGGDASDPRDQLGRGGGVC
Ga0310912_102537922	3300031941	Soil	VYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDASGSRDQ
Ga0310913_103769121	3300031945	Soil	LAEGLLVRRRSVVYDMYHWDSSVPATEDTGDTSPARGRASRRPPAAAQAVQVALDRRDNGGDASGLRDQ
Ga0306922_103999012	3300032001	Soil	VYDMYHWDSSAQATEDTGKTRQARARARRPAAAAQAVQIALDRRDNGGDASDPRNQFGRGGGAG
Ga0318563_100215463	3300032009	Soil	VYDMYHWDSSVPATEDTGDTSPARGRASRRPPAAAQAVQVALDRRDNGGDDSGL
Ga0310911_105377571	3300032035	Soil	GDTHQERSVVYDMYHWDSSAQATEDTGNTRQARARARRPAAAAQAVQIALDRRDNGGDASDPRNQFGRGGGAG
Ga0318559_104602492	3300032039	Soil	IVYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDASNARDQ
Ga0318549_101064592	3300032041	Soil	VYDMYHWDSSVPATEDKGNSSEARVRARRPAAAAQAVQVALDRRDNGGDASDPRYQ
Ga0318556_101174522	3300032043	Soil	LIRRRSVVYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDASNARDQ
Ga0318556_105896981	3300032043	Soil	VYDMYHWDSSAQATEDTGNTRQARARARRPAAAAQAVQIALDRRDNGGDASDPRNQ
Ga0318570_102514291	3300032054	Soil	VYDMYHWDSSVPATEDTGDADPARGRASRRPMAAAQAVQVALDRRDNGGDASNARDQ
Ga0318513_102958751	3300032065	Soil	VYDMYHWDSSAQATEDTGNTRQARARARRPAAAAQAVQIALDRRDNGGDASDPRNQFGR
Ga0318514_100525791	3300032066	Soil	VYDMYHWDSSAQATEDTRNTSQARARASRPAAAAQAVQVALDRRDNGGDASDPRYQ
Ga0318553_100074747	3300032068	Soil	PAARYGCRALAEGLLIRRRSVVYDMYHWDSSVPATEDTGDAGPARGRASRRPMAAAQAVQVALDRRDNGGDASNARDQ
Ga0306924_103979801	3300032076	Soil	VYDMYHWDSSVPATEDTGNGSQARARASRPPAAARAVQVALDRRDNGGDASDPRDQLGRGGG
Ga0318540_104149942	3300032094	Soil	VYDMYHWDSSVPATEDTGDTSPARGRASRRPPAAAQAVQVALDRRDNGGDAS
Ga0307471_1011517732	3300032180	Hardwood Forest Soil	VYDMYHWDRSVPAIEDTGNARPDPARARRPAAAAQAVQVALDRRDNGGDASDPRDYQ
Ga0318519_108324701	3300033290	Soil	VYDMYHWDSSAQATEDTRNTSQARARASRPAAAAQAVQVALDRRDNGGDASDPRDQLGRGGGVC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039243

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences