Metagenome / Metatranscriptome Family F039251

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039251
Family Type	Metagenome / Metatranscriptome
Number of Sequences	164
Average Sequence Length	53 residues
Representative Sequence	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQEGEIKS
Number of Associated Samples	129
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.07 %
% of genes near scaffold ends (potentially truncated)	31.71 %
% of genes from short scaffolds (< 2000 bps)	90.24 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.293 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.341 % of family members)
Environment Ontology (ENVO)	Unclassified (32.927 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.537 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.32% β-sheet: 0.00% Coil/Unstructured: 42.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF09849	DUF2076	12.80
PF00166	Cpn10	3.05
PF01339	CheB_methylest	2.44
PF00118	Cpn60_TCP1	1.22
PF07690	MFS_1	1.22
PF03705	CheR_N	1.22
PF00589	Phage_integrase	0.61
PF16363	GDP_Man_Dehyd	0.61
PF05951	Peptidase_M15_2	0.61
PF13701	DDE_Tnp_1_4	0.61
PF13437	HlyD_3	0.61
PF00581	Rhodanese	0.61
PF01545	Cation_efflux	0.61
PF05598	DUF772	0.61
PF01627	Hpt	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	4.88
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	3.05
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	2.44
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	1.22
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.61
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.61
COG3108	Uncharacterized conserved protein YcbK, DUF882 family	Function unknown [S]	0.61
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.29 %
All Organisms	root	All Organisms	31.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.29 %
cellular organisms	root	All Organisms → cellular organisms	31.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.05 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.61 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.61 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.22 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.61 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.61 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.61 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.61 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.29 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	15.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.44 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.61 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.61 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.85 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.61 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	0.61 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.61 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.61 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.61 %
Labrenzia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Labrenzia	0.61 %
Undibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium	0.61 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.61 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.85 %
unclassified Undibacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium	0.61 %
unclassified Labrenzia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Labrenzia → unclassified Labrenzia	0.61 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.61 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	0.61 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.85 %
Labrenzia sp. OB1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Labrenzia → unclassified Labrenzia → Labrenzia sp. OB1	0.61 %
Mesorhizobium sp. LNHC232B00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNHC232B00	0.61 %
Undibacterium sp. KW1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	0.61 %
unclassified Nostoc	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc	0.61 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.29 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.85 %
Nostoc sp. 'Peltigera malacea cyanobiont' DB3992	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. 'Peltigera malacea cyanobiont' DB3992	0.61 %
Labrenzia sp. OB1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Labrenzia → unclassified Labrenzia → Labrenzia sp. OB1	0.61 %
Mesorhizobium sp. LNHC232B00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNHC232B00	0.61 %
Undibacterium sp. KW1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	0.61 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_172384	Not Available	660	Open in IMG/M
3300001545\|JGI12630J15595_10129277	Not Available	500	Open in IMG/M
3300001867\|JGI12627J18819_10109337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1139	Open in IMG/M
3300002245\|JGIcombinedJ26739_100329417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1409	Open in IMG/M
3300002568\|C688J35102_120929706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2476	Open in IMG/M
3300002675\|Ga0005473J37261_102208	Not Available	617	Open in IMG/M
3300002677\|Ga0005475J37263_102993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	936	Open in IMG/M
3300002681\|Ga0005471J37259_114525	Not Available	533	Open in IMG/M
3300003505\|JGIcombinedJ51221_10293210	Not Available	662	Open in IMG/M
3300004080\|Ga0062385_10031965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2116	Open in IMG/M
3300004091\|Ga0062387_100619734	Not Available	779	Open in IMG/M
3300004091\|Ga0062387_101135449	Not Available	608	Open in IMG/M
3300004092\|Ga0062389_102115246	Not Available	738	Open in IMG/M
3300004099\|Ga0058900_1005857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1199	Open in IMG/M
3300004117\|Ga0058893_1325150	Not Available	550	Open in IMG/M
3300004120\|Ga0058901_1019924	Not Available	704	Open in IMG/M
3300004135\|Ga0058884_1395262	Not Available	569	Open in IMG/M
3300004137\|Ga0058883_1017330	Not Available	507	Open in IMG/M
3300004137\|Ga0058883_1018351	Not Available	501	Open in IMG/M
3300004153\|Ga0063455_101083765	Not Available	589	Open in IMG/M
3300004631\|Ga0058899_10007421	Not Available	1024	Open in IMG/M
3300004631\|Ga0058899_10087960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1153	Open in IMG/M
3300005167\|Ga0066672_10672999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300005171\|Ga0066677_10453371	Not Available	735	Open in IMG/M
3300005184\|Ga0066671_10367648	Not Available	916	Open in IMG/M
3300005187\|Ga0066675_10222389	Not Available	1336	Open in IMG/M
3300005434\|Ga0070709_10538825	Not Available	892	Open in IMG/M
3300005435\|Ga0070714_101214154	Not Available	736	Open in IMG/M
3300005435\|Ga0070714_101553490	Not Available	646	Open in IMG/M
3300005436\|Ga0070713_102189893	Not Available	536	Open in IMG/M
3300005437\|Ga0070710_10725384	Not Available	704	Open in IMG/M
3300005439\|Ga0070711_102081431	Not Available	500	Open in IMG/M
3300005445\|Ga0070708_100322214	Not Available	1456	Open in IMG/M
3300005454\|Ga0066687_10055016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1871	Open in IMG/M
3300005471\|Ga0070698_100003817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16551	Open in IMG/M
3300005471\|Ga0070698_100762512	Not Available	911	Open in IMG/M
3300005614\|Ga0068856_101896435	Not Available	607	Open in IMG/M
3300006046\|Ga0066652_101163415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300006175\|Ga0070712_100299727	Not Available	1301	Open in IMG/M
3300006176\|Ga0070765_101900693	Not Available	558	Open in IMG/M
3300006755\|Ga0079222_11343439	Not Available	656	Open in IMG/M
3300006800\|Ga0066660_10282943	Not Available	1315	Open in IMG/M
3300006806\|Ga0079220_10748238	Not Available	728	Open in IMG/M
3300006893\|Ga0073928_10111403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2274	Open in IMG/M
3300006893\|Ga0073928_11137441	Not Available	528	Open in IMG/M
3300006904\|Ga0075424_101092077	Not Available	850	Open in IMG/M
3300007788\|Ga0099795_10006147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3254	Open in IMG/M
3300007788\|Ga0099795_10097980	Not Available	1146	Open in IMG/M
3300009038\|Ga0099829_10226713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1519	Open in IMG/M
3300009143\|Ga0099792_10145804	Not Available	1299	Open in IMG/M
3300009143\|Ga0099792_10810483	Not Available	614	Open in IMG/M
3300009162\|Ga0075423_10706868	Not Available	1064	Open in IMG/M
3300010375\|Ga0105239_11698655	Not Available	731	Open in IMG/M
3300011120\|Ga0150983_10396216	Not Available	616	Open in IMG/M
3300011120\|Ga0150983_10937654	Not Available	836	Open in IMG/M
3300011120\|Ga0150983_11739278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1838	Open in IMG/M
3300011120\|Ga0150983_12174287	Not Available	538	Open in IMG/M
3300011120\|Ga0150983_13501111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300011120\|Ga0150983_13822844	Not Available	1097	Open in IMG/M
3300011120\|Ga0150983_15409846	Not Available	593	Open in IMG/M
3300011120\|Ga0150983_16702910	Not Available	702	Open in IMG/M
3300011269\|Ga0137392_10329628	Not Available	1263	Open in IMG/M
3300011270\|Ga0137391_10174230	Not Available	1875	Open in IMG/M
3300012203\|Ga0137399_10801188	Not Available	793	Open in IMG/M
3300012205\|Ga0137362_10524022	Not Available	1024	Open in IMG/M
3300012209\|Ga0137379_10250531	Not Available	1684	Open in IMG/M
3300012210\|Ga0137378_10815933	Not Available	845	Open in IMG/M
3300012351\|Ga0137386_11248706	Not Available	518	Open in IMG/M
3300012357\|Ga0137384_10902226	Not Available	712	Open in IMG/M
3300012361\|Ga0137360_10349909	Not Available	1237	Open in IMG/M
3300012362\|Ga0137361_10308500	Not Available	1449	Open in IMG/M
3300012582\|Ga0137358_10110511	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1864	Open in IMG/M
3300012582\|Ga0137358_10243088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1225	Open in IMG/M
3300012917\|Ga0137395_10970837	Not Available	610	Open in IMG/M
3300012917\|Ga0137395_11054538	Not Available	579	Open in IMG/M
3300012923\|Ga0137359_10309810	Not Available	1405	Open in IMG/M
3300012923\|Ga0137359_10887087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	769	Open in IMG/M
3300012924\|Ga0137413_11107828	Not Available	627	Open in IMG/M
3300012925\|Ga0137419_10595208	Not Available	888	Open in IMG/M
3300012927\|Ga0137416_11138696	Not Available	701	Open in IMG/M
3300012958\|Ga0164299_10782263	Not Available	678	Open in IMG/M
3300012960\|Ga0164301_11103504	Not Available	631	Open in IMG/M
3300012987\|Ga0164307_11741702	Not Available	528	Open in IMG/M
3300015241\|Ga0137418_10034371	All Organisms → cellular organisms → Bacteria → Proteobacteria	4685	Open in IMG/M
3300015242\|Ga0137412_10008027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8449	Open in IMG/M
3300015357\|Ga0134072_10056081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300015371\|Ga0132258_13912942	Not Available	1012	Open in IMG/M
3300017792\|Ga0163161_11836520	Not Available	539	Open in IMG/M
3300018433\|Ga0066667_10166290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1578	Open in IMG/M
3300018433\|Ga0066667_11020493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300018482\|Ga0066669_12156797	Not Available	527	Open in IMG/M
3300020199\|Ga0179592_10152650	Not Available	1056	Open in IMG/M
3300020199\|Ga0179592_10222137	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	853	Open in IMG/M
3300020579\|Ga0210407_10080388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2456	Open in IMG/M
3300020579\|Ga0210407_10775965	Not Available	740	Open in IMG/M
3300020579\|Ga0210407_10910407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300020580\|Ga0210403_10271928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	1389	Open in IMG/M
3300020580\|Ga0210403_10308084	Not Available	1297	Open in IMG/M
3300020580\|Ga0210403_10328957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1251	Open in IMG/M
3300020580\|Ga0210403_10634785	Not Available	860	Open in IMG/M
3300020580\|Ga0210403_10757818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300020581\|Ga0210399_10090647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2490	Open in IMG/M
3300020581\|Ga0210399_11172310	Not Available	611	Open in IMG/M
3300020582\|Ga0210395_10165661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1653	Open in IMG/M
3300020583\|Ga0210401_10114833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2526	Open in IMG/M
3300020583\|Ga0210401_10529256	Not Available	1041	Open in IMG/M
3300021086\|Ga0179596_10353635	Not Available	738	Open in IMG/M
3300021170\|Ga0210400_11675569	Not Available	500	Open in IMG/M
3300021171\|Ga0210405_11081881	Not Available	600	Open in IMG/M
3300021178\|Ga0210408_10065121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2847	Open in IMG/M
3300021178\|Ga0210408_11231496	Not Available	570	Open in IMG/M
3300021180\|Ga0210396_10213196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1722	Open in IMG/M
3300021401\|Ga0210393_10693489	Not Available	830	Open in IMG/M
3300021406\|Ga0210386_10579192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	970	Open in IMG/M
3300021420\|Ga0210394_10101863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2485	Open in IMG/M
3300021477\|Ga0210398_11468683	Not Available	531	Open in IMG/M
3300021478\|Ga0210402_10625009	Not Available	997	Open in IMG/M
3300021478\|Ga0210402_11945203	Not Available	514	Open in IMG/M
3300021479\|Ga0210410_11359042	Not Available	603	Open in IMG/M
3300021479\|Ga0210410_11680519	Not Available	528	Open in IMG/M
3300022508\|Ga0222728_1048991	Not Available	705	Open in IMG/M
3300022532\|Ga0242655_10335964	Not Available	501	Open in IMG/M
3300022557\|Ga0212123_10196935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1499	Open in IMG/M
3300024288\|Ga0179589_10184956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	905	Open in IMG/M
3300024288\|Ga0179589_10418389	Not Available	616	Open in IMG/M
3300025905\|Ga0207685_10459164	Not Available	664	Open in IMG/M
3300025906\|Ga0207699_10102302	Not Available	1820	Open in IMG/M
3300025910\|Ga0207684_10143938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2050	Open in IMG/M
3300025915\|Ga0207693_11143157	Not Available	590	Open in IMG/M
3300025916\|Ga0207663_10444272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	999	Open in IMG/M
3300026078\|Ga0207702_11260783	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300026312\|Ga0209153_1180882	Not Available	757	Open in IMG/M
3300026341\|Ga0257151_1025086	Not Available	632	Open in IMG/M
3300026356\|Ga0257150_1008146	Not Available	1411	Open in IMG/M
3300026359\|Ga0257163_1061280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. 'Peltigera malacea cyanobiont' DB3992	603	Open in IMG/M
3300026490\|Ga0257153_1023623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1264	Open in IMG/M
3300026494\|Ga0257159_1079272	Not Available	569	Open in IMG/M
3300026542\|Ga0209805_1294209	Not Available	617	Open in IMG/M
3300026551\|Ga0209648_10631524	Not Available	587	Open in IMG/M
3300027070\|Ga0208365_1001607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2484	Open in IMG/M
3300027376\|Ga0209004_1065716	Not Available	612	Open in IMG/M
3300027512\|Ga0209179_1128336	Not Available	567	Open in IMG/M
3300027521\|Ga0209524_1029908	Not Available	1138	Open in IMG/M
3300027537\|Ga0209419_1057898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	756	Open in IMG/M
3300027583\|Ga0209527_1133646	Not Available	552	Open in IMG/M
3300027635\|Ga0209625_1006264	Not Available	2588	Open in IMG/M
3300027737\|Ga0209038_10044860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1321	Open in IMG/M
3300027765\|Ga0209073_10149494	Not Available	861	Open in IMG/M
3300027894\|Ga0209068_10843622	Not Available	541	Open in IMG/M
3300028047\|Ga0209526_10129554	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300028047\|Ga0209526_10176792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Labrenzia → unclassified Labrenzia → Labrenzia sp. OB1	1486	Open in IMG/M
3300028536\|Ga0137415_10094179	All Organisms → cellular organisms → Bacteria → Proteobacteria	2849	Open in IMG/M
3300028906\|Ga0308309_10361302	Not Available	1240	Open in IMG/M
3300029636\|Ga0222749_10295984	Not Available	835	Open in IMG/M
3300030848\|Ga0075388_11378744	Not Available	624	Open in IMG/M
3300031446\|Ga0170820_10180755	Not Available	878	Open in IMG/M
3300031474\|Ga0170818_105970595	Not Available	549	Open in IMG/M
3300031708\|Ga0310686_100252946	Not Available	987	Open in IMG/M
3300031753\|Ga0307477_10395554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	947	Open in IMG/M
3300031753\|Ga0307477_11148118	Not Available	506	Open in IMG/M
3300031962\|Ga0307479_11171708	Not Available	733	Open in IMG/M
3300032174\|Ga0307470_10677120	Not Available	783	Open in IMG/M
3300032180\|Ga0307471_100313212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNHC232B00	1662	Open in IMG/M
3300032180\|Ga0307471_103767236	Not Available	536	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.73%
Host-Associated	Host-Associated	4.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.24%
Aquatic	Environmental → Aquatic	5.49%
Plants	Host-Associated → Plants	4.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.24%
Freshwater	Environmental → Aquatic → Freshwater	3.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.44%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.83%
Sediment	Environmental → Aquatic → Sediment	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.15%
Loam	Environmental → Terrestrial → Soil → Loam	31.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.05%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.32%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.05%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.34%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	18.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.66%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.44%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.22%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.22%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.22%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.22%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002675	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF122 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002677	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF124 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002681	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF120 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004117	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF222 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004135	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03191850	2199352024	Soil	MAGARQLRLDSERAFRLARAGCRKLFDELNDLGWNLQLQAQKVEREAQEGEIKS
JGI12630J15595_101292772	3300001545	Forest Soil	MTDARQLRRDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS*
JGI12627J18819_101093372	3300001867	Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQESEIKS*
JGIcombinedJ26739_1003294173	3300002245	Forest Soil	QLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQEGKIKS*
C688J35102_1209297064	3300002568	Soil	MADARQLRLDSERAFRLARAGRRKFFDELNDLGWNLQLQTQKVEREAQEGEIKI*
Ga0005473J37261_1022081	3300002675	Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNELGWNLQLQAQKVEREAQEGEIKS*
Ga0005475J37263_1029931	3300002677	Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQEGEIKS*
Ga0005471J37259_1145251	3300002681	Forest Soil	RAFRLARAGCRKFFDELNDLGWDLRLQAYKIEREPHEREIKS*
JGIcombinedJ51221_102932101	3300003505	Forest Soil	MADARQLRLDSERAFRLARAGRRKFFDELNELGWNLQLQAQKVEREAQEGEIKR*
Ga0062385_100319651	3300004080	Bog Forest Soil	MTDAKQLHLESERAFRLARAGCYRFADELNDLGWDLRRQAQKVEQAASSKRNQA*
Ga0062387_1006197341	3300004091	Bog Forest Soil	ADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQEGEIKS*
Ga0062387_1011354491	3300004091	Bog Forest Soil	ARQLRLDSERAFRLARAGSRKFFDELNDLGWDLQRQAQKVEREAQEGEITS*
Ga0062389_1021152461	3300004092	Bog Forest Soil	MTDARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQEGEIKS*
Ga0058900_10058571	3300004099	Forest Soil	ERAFRLARAGCRKFFDELNDLGWNLQLQAQRVEREAHESEIKS*
Ga0058893_13251502	3300004117	Forest Soil	MTDARQLRRDSERAFRLARAGCRKFFDELNDLGWDLQLRAHKVEREAHENELTS*
Ga0058901_10199242	3300004120	Forest Soil	GWRAGMADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLEAQKVEREAQEGEIKS*
Ga0058884_13952621	3300004135	Forest Soil	DSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVERDAQEGEIKS*
Ga0058883_10173302	3300004137	Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQEGKIKS*
Ga0058883_10183511	3300004137	Forest Soil	MADAVQLRLDSERAFRLARAGRRKFFDELNELGWNLQLQAQKVEREAQEGEIKS*
Ga0063455_1010837651	3300004153	Soil	DARQLRLDSERAFRLARAGRRKFFDELNDLGWNLQLQTQKVEREAQEGEIKI*
Ga0058899_100074211	3300004631	Forest Soil	PNGGWRAGMADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLEAQKVEREAQEGEIKS*
Ga0058899_100879601	3300004631	Forest Soil	LADARQLRLESERAFRLARAGCRKFFDELNDLGWNLQLQAQRVEREAHESEIKS*
Ga0066672_106729991	3300005167	Soil	MTDAQQLRLDSERAFRLARAGSRKFFDELNDLGWDLQRQAQKVEREARES
Ga0066677_104533712	3300005171	Soil	MADARQLRLDSERAFRLARAGRRKFFDELNDLGWNLQLQTQKVEREDQEGEIKI*
Ga0066671_103676483	3300005184	Soil	MTDAQQLRLDSERAFRLARAGSRKFFDELNDLGWDLQRQAQKVEREARESEVTG*
Ga0066675_102223894	3300005187	Soil	MERRAGMTDAQQLRLDSERAFRLARAGSRKFFDELNDLGWDLQRQAQKVEREARESEVTG
Ga0070709_105388251	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MADAIQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQEGEIKS*
Ga0070714_1012141541	3300005435	Agricultural Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQEGEIKS*
Ga0070714_1015534901	3300005435	Agricultural Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLRLQAYKIEREPHEREIKS*
Ga0070713_1021898931	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	QLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREPQESKIKS*
Ga0070710_107253842	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVERESQEGEIKS*
Ga0070711_1020814311	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQKGEIKT*
Ga0070708_1003222143	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MADARQLRLDSERAFRLSRAGCREFFDELNDLGWDLQLQTQKVEREAQKLKELKRQLGLP
Ga0066687_100550162	3300005454	Soil	MADARQLRLDSERAFRLARAGRRKFFDELNDLGWNLQLQTQKVEREAQEGAIKI*
Ga0070698_1000038173	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MADARQLRLDSERAFRLSRAGCREFFDELNDLGWDLQLQTQKVEREAQKLKELKRQFGPP
Ga0070698_1007625122	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTDARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS*
Ga0068856_1018964351	3300005614	Corn Rhizosphere	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVERDAEEGEIKS*
Ga0066652_1011634152	3300006046	Soil	MVHALPACGTGAGMTDAKQLRLDSERAFRLARAGSRKFFDELNDLGWDLQRQAQKVEREARESEVTG*
Ga0070712_1002997271	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQEREIKS*
Ga0070765_1019006932	3300006176	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVERE
Ga0079222_113434392	3300006755	Agricultural Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAKEGEIKS*
Ga0066660_102829431	3300006800	Soil	MTDAKQLRLDSERAFRQARAGSRKFFDELNDLGWDLQRQAQKVEREARESEVTG*
Ga0079220_107482381	3300006806	Agricultural Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAEEGEIKS*
Ga0073928_101114033	3300006893	Iron-Sulfur Acid Spring	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREPQESKVKS*
Ga0073928_111374412	3300006893	Iron-Sulfur Acid Spring	MTDARQLRLNSEPAFQLGRAGSRKFFDELNDLGWDLQRQAQKVEREAQESGITS*
Ga0075424_1010920772	3300006904	Populus Rhizosphere	MSAARQLRLESERAFRLARAGCRRFFDEMNDLGWDLRLQAQKAEREAQQPDEFKREIGPT
Ga0099795_100061473	3300007788	Vadose Zone Soil	MADARQLPLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVESEAHENEIKS*
Ga0099795_100979803	3300007788	Vadose Zone Soil	GMADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS*
Ga0099829_102267131	3300009038	Vadose Zone Soil	MTDARQLRLDSERAFRLAGAGCRKFFDELNDLGWDLQLQAHKVEREASRVCPAFDR*
Ga0099792_101458041	3300009143	Vadose Zone Soil	MADARQLRLDSERAFRLARAGCRKFFDELNELGWNLQLHAQKVEREAHENEIKN*
Ga0099792_108104831	3300009143	Vadose Zone Soil	ERAFRLARAGRRKFFDELNDLGWNLQLQTQKVEREAQEGEIKI*
Ga0075423_107068682	3300009162	Populus Rhizosphere	MADARQLRLDSERAFRLARAGCRKFFDDLNDLGWDLQLQAQKVERDAQKPEYLNKQRGSL
Ga0105239_116986551	3300010375	Corn Rhizosphere	WRTGMSAARQLRLESERAFRLARAGCRRFFDEMNDLGWDLQLQAEKAEFEALHLKESSKQLEPRK*
Ga0150983_103962162	3300011120	Forest Soil	ARAGCRKFFDELNDLGWDLQLQAQKVEREAQEGEIKS*
Ga0150983_109376542	3300011120	Forest Soil	MVMERCMADARQLRLDSERAFRLARAGRRKFFDELNELGWNLQLQAQKVEREAQEGE
Ga0150983_117392781	3300011120	Forest Soil	RQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHKNEIKR*
Ga0150983_121742872	3300011120	Forest Soil	SERAFRLARAGCRKFFDELNDLGWDLQLQAQKVESEAQESKIKS*
Ga0150983_135011111	3300011120	Forest Soil	DARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREARESEIKS*
Ga0150983_138228442	3300011120	Forest Soil	ERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS*
Ga0150983_154098461	3300011120	Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENEIKS*
Ga0150983_167029103	3300011120	Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVAREAQESEIKS*
Ga0137392_103296283	3300011269	Vadose Zone Soil	MADARQLRLDSERAFRLARAGCRKFFDQLNDLGWDLQLQAHKVEREAQENEIKN*
Ga0137391_101742303	3300011270	Vadose Zone Soil	MADARQLRLDSERAFRLARAGCRKFLDELNDLGWDLQLQAHKVEREASRVCPAFDR*
Ga0137399_108011882	3300012203	Vadose Zone Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENEIKSWKDNSDLHFSEG*
Ga0137362_105240223	3300012205	Vadose Zone Soil	MTDALQLRLDSERAFRLARAGCRKFFHELNDLGWDLQLQAHKVEREAHENELTS*
Ga0137379_102505312	3300012209	Vadose Zone Soil	MADARQLRLDSERAFRLARGGCRKFFDQLNDVGWDLQLQAYKVECEVHRNEIES*
Ga0137378_108159331	3300012210	Vadose Zone Soil	DARQLRLDSERAFRLARGGCRKFFDQLNDVGWDLQLQAYKVECEVHRNEIES*
Ga0137386_112487061	3300012351	Vadose Zone Soil	MADARQLPLDSERAFRLARGGCRKFFDQLNDVGWDLQLQAYKVECEVHRNEI
Ga0137384_109022262	3300012357	Vadose Zone Soil	VGMADARQLRLDSERAFRLARGGCRKFFDQLNDVGWDLQLQAYKVECEVHRNEIES*
Ga0137360_103499091	3300012361	Vadose Zone Soil	MTDARQLRLDSERAFRLARAGGRKFFHELNDLGWDLQLQAHKVEREAHENELTS*
Ga0137361_103085002	3300012362	Vadose Zone Soil	MTDARQLRLDSGRAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS*
Ga0137358_101105111	3300012582	Vadose Zone Soil	MESWHRRCETVRLDSERAFRLARAGCRKFFDELNELGWNLQLQAQKVEREAQEGEIKS*
Ga0137358_102430881	3300012582	Vadose Zone Soil	MADARQLRLDSERAFRLARAGRRKFFDELNDLGWNLQLQTQKVEREAQEGEIKS*
Ga0137395_109708372	3300012917	Vadose Zone Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENEIKG*
Ga0137395_110545382	3300012917	Vadose Zone Soil	LRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQEGEIKS*
Ga0137359_103098103	3300012923	Vadose Zone Soil	MTDARQLRLDFERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS*
Ga0137359_108870871	3300012923	Vadose Zone Soil	RAGCRKFFDELNDLGWDLQLQAQKVEREAQEGEIKS*
Ga0137413_111078281	3300012924	Vadose Zone Soil	MADARQLRLDSERALRLARAGCRKFFDELNDLGWNLQLQAQKLEREAQKSKIKS*
Ga0137419_105952083	3300012925	Vadose Zone Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDVGWDLQLQAQNVEREAHENEIES*
Ga0137416_111386961	3300012927	Vadose Zone Soil	MADAQQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVESEAHENEIKS*
Ga0164299_107822631	3300012958	Soil	MADARQLRLDSERAFRLARAGRRKFFDELNDLGWNLQLQAQKVQREAQEGEIKS*
Ga0164301_111035042	3300012960	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAKKG*
Ga0164307_117417021	3300012987	Soil	QLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQEGEIKS*
Ga0137418_100343712	3300015241	Vadose Zone Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS*
Ga0137412_100080279	3300015242	Vadose Zone Soil	FRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS*
Ga0134072_100560811	3300015357	Grasslands Soil	DARQLRLDSERAFRLARAGRRKFFDELNDLGWNLQLQTQKVEREAQESEITS*
Ga0132258_139129422	3300015371	Arabidopsis Rhizosphere	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWELQLQAQKAERDAQKPENLNEQLGPL
Ga0163161_118365201	3300017792	Switchgrass Rhizosphere	VADARQLRLDSERAFRLARAGCRKFFDDLNDLGWDLQLQAQKVERDAQKPEYLNKQRGSL
Ga0066667_101662901	3300018433	Grasslands Soil	MADARQLRLDSERAFRLARAGRRKFFDELNDLGWDLQRQAQKVEREARESEVAG
Ga0066667_110204931	3300018433	Grasslands Soil	MTDARQLRLASERAFRPARAGSRKFFDELNDLGWDLQRQAQKVEREVQESEITS
Ga0066669_121567972	3300018482	Grasslands Soil	MADARQLRLDSERAFRLARAGRRKFFDELNELGWNLQLQTQKVEREAQEGEIKI
Ga0179592_101526501	3300020199	Vadose Zone Soil	MTDARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS
Ga0179592_102221371	3300020199	Vadose Zone Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDVGWDLQLQAQNVEREAHENEIES
Ga0210407_100803883	3300020579	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVERESQEGEIKS
Ga0210407_107759651	3300020579	Soil	MTDARQLRRDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS
Ga0210407_109104072	3300020579	Soil	AFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQEGEIKS
Ga0210403_102719283	3300020580	Soil	MADARQLRLDAERAFRLARAGCRKFFNELNDLGWDLQLQAQKVEREAQESEIKS
Ga0210403_103080841	3300020580	Soil	MADARQLRLDSERAFRLARAGRRKFFDELNELGWNLQLQAQKVEREAQEGEIKS
Ga0210403_103289572	3300020580	Soil	LRVDSERAFQLARAGCRKFFDELNDLGWDLQLQAQKVEREAQEREIKS
Ga0210403_106347852	3300020580	Soil	MADARQLRLDSERAFRLARAGRRKFFDELNDLGWNLQLQAQKVEREAQEGEIKI
Ga0210403_107578183	3300020580	Soil	QLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQEGEIKS
Ga0210399_100906473	3300020581	Soil	MADAIQLRLDSERAFRLARAGCRKFFDELNDLGWKLQLQAQKVEREAQEGEIKS
Ga0210399_111723101	3300020581	Soil	AFRLARAGCRKFFDELNDLGWDLQLEAQKVEREAQEGEIKS
Ga0210395_101656611	3300020582	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQEGKIKS
Ga0210401_101148331	3300020583	Soil	GMADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQEGEIKS
Ga0210401_105292561	3300020583	Soil	MADARQLRLESERAFRLARAGCRKFFDELNDLGWNLQLQAQRVEREAQESEIKS
Ga0179596_103536351	3300021086	Vadose Zone Soil	MTDARQLRLDFERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS
Ga0210400_116755691	3300021170	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQEGKIKS
Ga0210405_110818812	3300021171	Soil	MADARQLRLESERAFRLARAGCGKFFDELNDLGWNLQLQAQRVEREAQESEIKS
Ga0210408_100651213	3300021178	Soil	MADARQLRLDSERAFRLAHAGCRRFFDELNDLGWDLQLQAQKVEREAE
Ga0210408_112314961	3300021178	Soil	WRAGMADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQEGKIKS
Ga0210396_102131962	3300021180	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLEAQKVEREAQEGEIKS
Ga0210393_106934891	3300021401	Soil	ARAGCRKFFDELNDLGWDLQLQAQKVEREAQEGEIKS
Ga0210386_105791922	3300021406	Soil	LRVDSERAFQLARAGCRKFFDELNDLGWDLQLQAQKVEREAQESEIKS
Ga0210394_101018631	3300021420	Soil	MADAVQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQEGEIKS
Ga0210398_114686831	3300021477	Soil	AGCRKFFDELNDLGWNLQLQAQKVEREAQEGEIKS
Ga0210402_106250091	3300021478	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQESKIKT
Ga0210402_119452031	3300021478	Soil	SERAFRLARAGCRKFFAELNDLGWDLLLQAPKVEREAQQREIKS
Ga0210410_113590422	3300021479	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHKNEIKR
Ga0210410_116805191	3300021479	Soil	CFGPNGGWRAGMADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQEGEIKS
Ga0222728_10489911	3300022508	Soil	MADARQLRLDSERAFRLARAGRHKFFDELNELGWNLQLQAQKVEREAQEGEIKS
Ga0242655_103359641	3300022532	Soil	ERAFRLARAGCRKFFDELNDLGWDLRLQAYKIEREPHEREIKS
Ga0212123_101969352	3300022557	Iron-Sulfur Acid Spring	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLHAQKVEREPQESKVKS
Ga0179589_101849561	3300024288	Vadose Zone Soil	MADARQLRLDSERAFRLARAGRRKFFDELNDLGWNLQLQTQKVEREAQEGEIKI
Ga0179589_104183891	3300024288	Vadose Zone Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENEIKSWKDNSDLHFSEG
Ga0207685_104591641	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	ARAGCRKFFDELNDLGWDLRLQAYKIEREPHEREIKS
Ga0207699_101023025	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LRLDSERAFRLAHAGCRRFFDELNDLGWDLQLQAQKVEREAEKPKELNKQLGPL
Ga0207684_101439382	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MADARQLRLDSERAFRLSRAGCREFFDELNDLGWDLQLQTQKVEREAQKLKELKRQLGPP
Ga0207693_111431572	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVAREAQESEIKR
Ga0207663_104442721	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	SERAFRLARAGCRKFFDELNDLGWDLRLQAYKIEREPHEREIKS
Ga0207702_112607832	3300026078	Corn Rhizosphere	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVERDAEEGEIKS
Ga0209153_11808821	3300026312	Soil	QLRLDSERAFRLARAGSRKFFDELNDLGWDLQRQAQKVEREARESEVTG
Ga0257151_10250861	3300026341	Soil	RQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS
Ga0257150_10081461	3300026356	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNELGWNLQLQAQKVEREAQEGEIKS
Ga0257163_10612801	3300026359	Soil	MADAQQLRLDSERAIRLARAGCRKFFDELNDLGWDLQLQAHKVESEA
Ga0257153_10236233	3300026490	Soil	DARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS
Ga0257159_10792721	3300026494	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREA
Ga0209805_12942091	3300026542	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQTQKVEREAQEGEIKI
Ga0209648_106315241	3300026551	Grasslands Soil	MADARQLRLDSERAFRLARPGCRKFFDELNDLGWNLQLQAQKVEREAQEGEIKS
Ga0208365_10016073	3300027070	Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQESEIKS
Ga0209004_10657162	3300027376	Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQESEIKS
Ga0209179_11283361	3300027512	Vadose Zone Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS
Ga0209524_10299081	3300027521	Forest Soil	MADAIQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQEGEIKS
Ga0209419_10578981	3300027537	Forest Soil	RLARAGCRKFFDELNDLGWDLQLQAQKVERETQESKIKS
Ga0209527_11336462	3300027583	Forest Soil	LRRDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENELTS
Ga0209625_10062641	3300027635	Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQKSEIKS
Ga0209038_100448601	3300027737	Bog Forest Soil	MTDAKQLHLESERAFRLARAGCYRFADELNDLGWDLRRQAQKVEQAASSKRNQA
Ga0209073_101494942	3300027765	Agricultural Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAEEGEIKS
Ga0209068_108436221	3300027894	Watersheds	MEDARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVAREAQESEIKS
Ga0209526_101295542	3300028047	Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVEREAHENEPTS
Ga0209526_101767923	3300028047	Forest Soil	MADARQLRLDSERAFRLARAGRRKFFDELNELGWNLQLQAQKVEREA
Ga0137415_100941793	3300028536	Vadose Zone Soil	MTDARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAHKVECEAHENELTS
Ga0308309_103613022	3300028906	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKAEREAQESEIKS
Ga0222749_102959841	3300029636	Soil	MADARQLRLGSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAEKPKELNKQLGPL
Ga0075388_113787442	3300030848	Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAQEGEIKK
Ga0170820_101807551	3300031446	Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLEAQKAEREAQESKIKS
Ga0170818_1059705953	3300031474	Forest Soil	FRLARAGCRKFFNELNDLGWDLQLQAQKVEREAQESEIKS
Ga0310686_1002529463	3300031708	Soil	MTDAKQLRLESERAFRLARAGCYRFADELNDLGWDLRRQAQKVEEDAAPKRNQD
Ga0307477_103955543	3300031753	Hardwood Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWNLQLQAQRVEREAQESEIKS
Ga0307477_111481181	3300031753	Hardwood Forest Soil	MADARQLRLESERAFRLARAGCRKFFDELNDLGWNLQLQAQKVEREAEEGEIKS
Ga0307479_111717081	3300031962	Hardwood Forest Soil	VDSERAFQLARAGCRKFFDELNDLGWDLQLQAQKVEREAQEREIKS
Ga0307470_106771201	3300032174	Hardwood Forest Soil	MADARQLRLASERAFRLARAGCRKFFDELNDLGWDLQLQAQKVEREAQESEIKS
Ga0307471_1003132122	3300032180	Hardwood Forest Soil	MVMESCMADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLRLQAYKIEREPHEREIKS
Ga0307471_1037672361	3300032180	Hardwood Forest Soil	MADARQLRLDSERAFRLARAGCRKFFDELNDLGWDLQLQAQKVERESQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039251

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences