Metagenome Family F040022

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040022
Family Type	Metagenome
Number of Sequences	162
Average Sequence Length	51 residues
Representative Sequence	ELLQLVQRGVIDTRHITTRYFPLADVNEALDYIEKRGDNDPLWPMYAAE
Number of Associated Samples	131
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.88 %
% of genes near scaffold ends (potentially truncated)	88.89 %
% of genes from short scaffolds (< 2000 bps)	87.65 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.679 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (17.284 % of family members)
Environment Ontology (ENVO)	Unclassified (26.543 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.123 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.57% β-sheet: 0.00% Coil/Unstructured: 71.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF01381	HTH_3	8.64
PF07883	Cupin_2	8.02
PF08309	LVIVD	7.41
PF16277	DUF4926	6.79
PF02604	PhdYeFM_antitox	4.94
PF13416	SBP_bac_8	3.09
PF01402	RHH_1	3.09
PF01850	PIN	3.09
PF08402	TOBE_2	2.47
PF01797	Y1_Tnp	2.47
PF01977	UbiD	1.85
PF08281	Sigma70_r4_2	1.23
PF00903	Glyoxalase	1.23
PF00528	BPD_transp_1	1.23
PF00857	Isochorismatase	1.23
PF13343	SBP_bac_6	1.23
PF00106	adh_short	0.62
PF08843	AbiEii	0.62
PF01734	Patatin	0.62
PF02775	TPP_enzyme_C	0.62
PF05015	HigB-like_toxin	0.62
PF00596	Aldolase_II	0.62
PF01936	NYN	0.62
PF02776	TPP_enzyme_N	0.62
PF02452	PemK_toxin	0.62
PF13271	DUF4062	0.62
PF12762	DDE_Tnp_IS1595	0.62
PF08123	DOT1	0.62
PF08240	ADH_N	0.62
PF12844	HTH_19	0.62
PF05973	Gp49	0.62
PF02515	CoA_transf_3	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	7.41
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	4.94
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	4.94
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	2.47
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	1.85
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.23
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.23
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.62
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.62
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.62
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.62
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.62
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.62
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.62
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.62
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.62
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.68 %
Unclassified	root	N/A	4.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.68 %
Unclassified	root	N/A	4.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.68 %
Unclassified	root	N/A	4.32 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.56 %
Unclassified	root	N/A	4.32 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.62 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	15.43 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.32 %
Unclassified	root	N/A	4.32 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.23 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.62 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	15.43 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	6.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.32 %
Unclassified	root	N/A	4.32 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	15.43 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	6.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.32 %
Unclassified	root	N/A	4.32 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	15.43 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	6.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.32 %
Unclassified	root	N/A	4.32 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	15.43 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	6.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.32 %
Unclassified	root	N/A	4.32 %
Dyella marensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella marensis	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725004\|GPKC_F5OHE3B02JZ55J	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
2228664022\|INPgaii200_c1171006	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1025654	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	928	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1044798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1046851	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1011519	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1033588	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300003319\|soilL2_10003875	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300004281\|Ga0066397_10146124	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300004463\|Ga0063356_103950693	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300004633\|Ga0066395_10360040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	810	Open in IMG/M
3300005171\|Ga0066677_10303156	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300005177\|Ga0066690_10128893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1649	Open in IMG/M
3300005178\|Ga0066688_10408071	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300005178\|Ga0066688_10481484	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005186\|Ga0066676_10051763	All Organisms → cellular organisms → Bacteria	2337	Open in IMG/M
3300005447\|Ga0066689_10360258	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	908	Open in IMG/M
3300005536\|Ga0070697_101728441	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300005552\|Ga0066701_10272688	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300005553\|Ga0066695_10021320	All Organisms → cellular organisms → Bacteria	3622	Open in IMG/M
3300005554\|Ga0066661_10333169	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300005555\|Ga0066692_10610733	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005560\|Ga0066670_10279641	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300005561\|Ga0066699_10463820	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300005568\|Ga0066703_10363059	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300005576\|Ga0066708_10324576	All Organisms → cellular organisms → Bacteria → Proteobacteria	987	Open in IMG/M
3300005598\|Ga0066706_10928792	Not Available	676	Open in IMG/M
3300005598\|Ga0066706_11108151	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005764\|Ga0066903_109006763	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300006034\|Ga0066656_10067690	All Organisms → cellular organisms → Bacteria	2102	Open in IMG/M
3300006049\|Ga0075417_10078288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1472	Open in IMG/M
3300006049\|Ga0075417_10109849	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300006058\|Ga0075432_10073883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1228	Open in IMG/M
3300006796\|Ga0066665_10198386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1556	Open in IMG/M
3300006797\|Ga0066659_10073217	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300006797\|Ga0066659_10881984	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300006797\|Ga0066659_11943019	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300006845\|Ga0075421_100022352	All Organisms → cellular organisms → Bacteria	7966	Open in IMG/M
3300006852\|Ga0075433_10097908	All Organisms → cellular organisms → Bacteria	2596	Open in IMG/M
3300006853\|Ga0075420_100989279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	724	Open in IMG/M
3300006854\|Ga0075425_100851270	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1044	Open in IMG/M
3300006854\|Ga0075425_102906195	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300006865\|Ga0073934_10170556	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300006880\|Ga0075429_100240636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1585	Open in IMG/M
3300006880\|Ga0075429_100460161	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300006904\|Ga0075424_101257621	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300006904\|Ga0075424_102434333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	549	Open in IMG/M
3300006914\|Ga0075436_100327719	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300006914\|Ga0075436_101220072	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300006969\|Ga0075419_11106546	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300006969\|Ga0075419_11189676	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300009012\|Ga0066710_103592991	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300009094\|Ga0111539_11854900	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300009100\|Ga0075418_10588716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1197	Open in IMG/M
3300009137\|Ga0066709_100593755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1576	Open in IMG/M
3300009147\|Ga0114129_12032673	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300009147\|Ga0114129_12307532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	646	Open in IMG/M
3300009147\|Ga0114129_13172025	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300009147\|Ga0114129_13363821	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300009157\|Ga0105092_10935725	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300009176\|Ga0105242_12604026	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300009444\|Ga0114945_10013610	All Organisms → cellular organisms → Bacteria	4357	Open in IMG/M
3300009553\|Ga0105249_10978192	Not Available	915	Open in IMG/M
3300009678\|Ga0105252_10316678	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300009792\|Ga0126374_11786323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300009815\|Ga0105070_1028466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	993	Open in IMG/M
3300010043\|Ga0126380_11437882	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300010047\|Ga0126382_10853846	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	782	Open in IMG/M
3300010048\|Ga0126373_10120464	All Organisms → cellular organisms → Bacteria	2453	Open in IMG/M
3300010048\|Ga0126373_12676342	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300010166\|Ga0126306_11398061	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300010304\|Ga0134088_10457053	Not Available	626	Open in IMG/M
3300010336\|Ga0134071_10031648	All Organisms → cellular organisms → Bacteria	2314	Open in IMG/M
3300010359\|Ga0126376_13101630	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300010361\|Ga0126378_12936281	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300010362\|Ga0126377_11011876	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300010391\|Ga0136847_13531169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1289	Open in IMG/M
3300010398\|Ga0126383_11694528	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	721	Open in IMG/M
3300010399\|Ga0134127_12701588	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300010403\|Ga0134123_11129415	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300011003\|Ga0138514_100125469	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300011435\|Ga0137426_1068891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	956	Open in IMG/M
3300012204\|Ga0137374_10096770	All Organisms → cellular organisms → Bacteria	2797	Open in IMG/M
3300012204\|Ga0137374_10329743	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300012204\|Ga0137374_10974439	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300012206\|Ga0137380_10672000	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	901	Open in IMG/M
3300012207\|Ga0137381_10294756	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300012208\|Ga0137376_10175902	Not Available	1847	Open in IMG/M
3300012208\|Ga0137376_10271685	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1471	Open in IMG/M
3300012208\|Ga0137376_11389975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300012208\|Ga0137376_11588103	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012210\|Ga0137378_11033574	Not Available	736	Open in IMG/M
3300012211\|Ga0137377_11592655	Not Available	577	Open in IMG/M
3300012232\|Ga0137435_1237851	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300012285\|Ga0137370_10092623	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300012349\|Ga0137387_10670732	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300012350\|Ga0137372_10099513	All Organisms → cellular organisms → Bacteria	2443	Open in IMG/M
3300012353\|Ga0137367_10229186	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300012358\|Ga0137368_10761686	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012358\|Ga0137368_10926513	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300012360\|Ga0137375_10503661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella marensis	1030	Open in IMG/M
3300012510\|Ga0157316_1007359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	932	Open in IMG/M
3300012532\|Ga0137373_10459470	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300012927\|Ga0137416_10981951	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300012929\|Ga0137404_10172424	All Organisms → cellular organisms → Bacteria → Proteobacteria	1815	Open in IMG/M
3300012929\|Ga0137404_10581812	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300012929\|Ga0137404_12315157	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300012930\|Ga0137407_10599265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300012930\|Ga0137407_10952847	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300012930\|Ga0137407_11783004	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300012957\|Ga0164303_11069354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	580	Open in IMG/M
3300012984\|Ga0164309_11039031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	678	Open in IMG/M
3300012989\|Ga0164305_10432027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1018	Open in IMG/M
3300014874\|Ga0180084_1113043	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300014875\|Ga0180083_1134169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300014884\|Ga0180104_1011311	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300014884\|Ga0180104_1039101	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300015264\|Ga0137403_10164779	All Organisms → cellular organisms → Bacteria → Proteobacteria	2172	Open in IMG/M
3300015373\|Ga0132257_100475159	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300015373\|Ga0132257_101239004	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300016371\|Ga0182034_10782326	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300018028\|Ga0184608_10533103	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300018056\|Ga0184623_10235699	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300018061\|Ga0184619_10053084	All Organisms → cellular organisms → Bacteria	1767	Open in IMG/M
3300018074\|Ga0184640_10006636	All Organisms → cellular organisms → Bacteria → Proteobacteria	3961	Open in IMG/M
3300018075\|Ga0184632_10116946	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300018082\|Ga0184639_10042612	All Organisms → cellular organisms → Bacteria	2334	Open in IMG/M
3300018431\|Ga0066655_10716687	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300018468\|Ga0066662_12952411	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300019878\|Ga0193715_1067288	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300020006\|Ga0193735_1084282	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300021073\|Ga0210378_10009187	All Organisms → cellular organisms → Bacteria	4246	Open in IMG/M
3300021078\|Ga0210381_10337633	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300021432\|Ga0210384_10923026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	774	Open in IMG/M
3300022534\|Ga0224452_1119985	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	808	Open in IMG/M
3300022563\|Ga0212128_10023605	All Organisms → cellular organisms → Bacteria	3956	Open in IMG/M
3300025157\|Ga0209399_10008749	All Organisms → cellular organisms → Bacteria	4380	Open in IMG/M
3300025910\|Ga0207684_10394472	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300025944\|Ga0207661_11708562	Not Available	575	Open in IMG/M
3300026326\|Ga0209801_1067815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1586	Open in IMG/M
3300026327\|Ga0209266_1162617	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300026332\|Ga0209803_1092694	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300026540\|Ga0209376_1055667	All Organisms → cellular organisms → Bacteria → Acidobacteria	2242	Open in IMG/M
3300027873\|Ga0209814_10098265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300027873\|Ga0209814_10456982	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300027907\|Ga0207428_10314337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1158	Open in IMG/M
3300027907\|Ga0207428_10550153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	835	Open in IMG/M
3300027907\|Ga0207428_10649368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	757	Open in IMG/M
3300027909\|Ga0209382_10232662	All Organisms → cellular organisms → Bacteria	2099	Open in IMG/M
3300027961\|Ga0209853_1029010	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300028380\|Ga0268265_11648461	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	647	Open in IMG/M
3300031198\|Ga0307500_10225611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	569	Open in IMG/M
3300031719\|Ga0306917_10871232	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300031740\|Ga0307468_101115311	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031820\|Ga0307473_10196902	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300031820\|Ga0307473_10208748	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300031820\|Ga0307473_10545971	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	791	Open in IMG/M
3300032035\|Ga0310911_10613273	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300032180\|Ga0307471_102280799	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300032205\|Ga0307472_101641074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	633	Open in IMG/M
3300033004\|Ga0335084_10214918	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300033813\|Ga0364928_0084293	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.40%
Host-Associated	Host-Associated	21.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.81%
Plants	Host-Associated → Plants	21.60%
Aquatic	Environmental → Aquatic	13.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.52%
Sediment	Environmental → Aquatic → Sediment	8.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.09%
Freshwater	Environmental → Aquatic → Freshwater	2.47%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.47%
Floodplain	Environmental → Terrestrial → Floodplain	0.62%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.64%
Loam	Environmental → Terrestrial → Soil → Loam	4.32%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.85%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.85%
Sand	Environmental → Terrestrial → Soil → Sand	1.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.23%
Lake	Environmental → Aquatic → Freshwater → Lake	0.62%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.62%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.62%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.23%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.62%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	17.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.47%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.23%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.23%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.23%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.23%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.62%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.62%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.62%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.62%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725004	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025157	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKC_03876600	2067725004	Soil	ELLQLVRRGVIDTRHITTRYFPLTAVNEALDYIKTRGENDPLWPMYATE
INPgaii200_11710061	2228664022	Soil	GRFAXDVAELLQLVRRGVIDTRHITTRYFPLTAVNEALDYIKTRGENDPLWPMYATE
AF_2010_repII_A01DRAFT_10256542	3300000580	Forest Soil	QCGVIDTRHITTRYFPLAEVNEALDYIEKRGDSDPLWPMYAAD*
AP72_2010_repI_A10DRAFT_10447982	3300000651	Forest Soil	LQLVQCGVIDTRHITTRYFPLAEVNEALDYIEKRGDSDPLWPMYAAD*
AF_2010_repII_A100DRAFT_10468511	3300000655	Forest Soil	TGRFAMDIAELLQLVQRGVIDTRHITTRYFPLAEVNEALDYIEKRGDSDPLWPMYAAD*
AP72_2010_repI_A100DRAFT_10115191	3300000837	Forest Soil	MDIAELLQLVQRGVIDTRHITTRYFPLAEVNEALDYIEKRGDSDPLWPMYAAD*
AP72_2010_repI_A001DRAFT_10335882	3300000893	Forest Soil	TSVTGRFAMDIAELLQLVQRGVIDTRHITTRYFPLAEVNEALDYIEKRGDSDPLWPMYAAD*
soilL2_100038754	3300003319	Sugarcane Root And Bulk Soil	LELARRGVINTRHVSARYFPLERVNDAIDYIVKRGDNDPLWPMYAAD*
Ga0066397_101461241	3300004281	Tropical Forest Soil	DFPELLELARRGVIDTSHVTTRYFPLEAVNEAIDYIAKRGDHEPLWPMYAPDA*
Ga0063356_1039506931	3300004463	Arabidopsis Thaliana Rhizosphere	FPEVLELARRGVIDTRHVTTRYFPIGAINEALDHIEKRGPNDPIWPMYAAD*
Ga0066395_103600401	3300004633	Tropical Forest Soil	QRGVIDTRHITTRYFPLTDVNEALDYIEKRGDSDPLWPMYAAD*
Ga0066677_103031563	3300005171	Soil	RGVIDTRHITTRYFPLSDVNEALDYIEKRGDNDPLWPMYAAE*
Ga0066690_101288932	3300005177	Soil	HYIDFPELLELARRGVIDTRHVTTRFFPLERVNDAIDYIAKRGDDEPLWPMYAPDA*
Ga0066688_104080713	3300005178	Soil	LMIRSIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLSDVNEALDYIEKRGDNDPLWPMYAAE*
Ga0066688_104814841	3300005178	Soil	ELLQLVQRGVIDTRHITTRYFPLADVNEALDYIEKRGDNDPLWPMYAAE*
Ga0066676_100517631	3300005186	Soil	FAMDVAELLQLVQRGVIDTRHITTRYFPLSDVNEALDYIEKRGDNDPLWPMYAAE*
Ga0066689_103602582	3300005447	Soil	VRRGVIDTRHITTRYFPLSDVNEALDYIEKRGDNDPLWPMYAAE*
Ga0070697_1017284412	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	FPELLELARRGVIDTRHVTTRYFPLEAVNDAIDYIAKRGDDEPLWPMYAPDA*
Ga0066701_102726883	3300005552	Soil	DVAELLELVQRGVIDTRHITTRYFPLSDVNEALDYIEKRGDNDPLWPMYAAE*
Ga0066695_100213201	3300005553	Soil	QLVQRGVIDTRHITTRYFPLAAANKALDYIKTRGDNDPLWPMYAAE*
Ga0066661_103331693	3300005554	Soil	MIRSIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLSDVNEALDYIEKRGDNDPLWPMYAAE*
Ga0066692_106107331	3300005555	Soil	IEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLADVNEALDYIEKRGDNDPLWPMYAAE*
Ga0066670_102796412	3300005560	Soil	LVQRGVIDTRHITTRYFPLAAANKALDYIKTRGDNDPLWPMYAAE*
Ga0066699_104638201	3300005561	Soil	MDVAELLQLVQRGVIDTRHITTSYFPLTAVNEALDYIETRGDNDPLWPMYAAE*
Ga0066703_103630592	3300005568	Soil	RFAMDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIKKRGDNDPLWPMYAAE*
Ga0066708_103245763	3300005576	Soil	QLVQRGVIDTRHITTRYFPLSDVNEALDYIEKRGDNDPLWPMYAAE*
Ga0066706_109287922	3300005598	Soil	HITTQYFPLTAVNEALDYIKTRGDSDPLWPMYAAE*
Ga0066706_111081511	3300005598	Soil	GRFAMDVAELLQLVQRGVIDTRHIITRYFLLADVNEALDYIEKRGDNDPLWLMYATE*
Ga0066903_1090067632	3300005764	Tropical Forest Soil	AELLQLVQRGVIDTRHITTRYFPLADVNEALDYIEKRGDNDPLWPMYAAD*
Ga0066656_100676905	3300006034	Soil	SVTGRFAMDVAELLQLVRNGVIDTRHITTRYFPLADVNEALDYIEKRGDNDPLWPMYAAE
Ga0075417_100782883	3300006049	Populus Rhizosphere	ELLELVQRGVIDTRHITTRYFPLTAVNEALDYIKTRGDSDPLWPMYAAE*
Ga0075417_101098491	3300006049	Populus Rhizosphere	VQRGVIDTRHITTRYFPPTAVNDALDYIKTRGDSDPLWPMYAAE
Ga0075432_100738831	3300006058	Populus Rhizosphere	VQRGVIDTRHITTRYFPLADVNEALDYIEKRGDDDPLWPMYAAE*
Ga0066665_101983864	3300006796	Soil	MDVAELLQLVQRGVIDTRHITTQYFPLTAVNEALDYIKTRGDSDPLWPMYAAE*
Ga0066659_100732171	3300006797	Soil	DFPELLELARRGVIDTRHVTTRFFPLERVNDAIDYIAKRGDDEPLWPMYAPDA*
Ga0066659_108819841	3300006797	Soil	AELLQLVQRGLIDTRHITTRYFSLTEVNEALDYIEKRGDNDPLWPMYAAE*
Ga0066659_119430191	3300006797	Soil	RSIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLADVNGALDYIEKRGDNDPLWPMYAAE*
Ga0075421_10002235211	3300006845	Populus Rhizosphere	TGRFAMDVAELLELVQRGVIDTRHITTRYFPLADVNAALDYIEKRGDNDPLWPMYAAE*
Ga0075433_100979081	3300006852	Populus Rhizosphere	LELARRGVIDTRHVTTRFFPLERVNDAIDYIAKRGDDEPLWPMYAPDA*
Ga0075420_1009892791	3300006853	Populus Rhizosphere	ELLELVQRGVIDTRHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE*
Ga0075425_1008512701	3300006854	Populus Rhizosphere	RSIEFTSVTGRFAMDVAELLQLVQNGVIDTRHITTRYFPLSGVNEALDYIEKRGDDDPLWPMYAAD*
Ga0075425_1029061952	3300006854	Populus Rhizosphere	SIEFTSVTGRFAMDVAELLELVQRGVIDTRHITTRYFPLTAVNEALDYIKTRGDSDPLWPMYAAE*
Ga0073934_101705561	3300006865	Hot Spring Sediment	SVTGRFAMDVAELLQLVQSGAIDTRHITTRYFPLTAVNEALDYIEKRGDNDPLWPMYASD
Ga0075429_1002406363	3300006880	Populus Rhizosphere	HITTRYFPLADVNEALDYIEKRGDNDPLWPMYAAE*
Ga0075429_1004601611	3300006880	Populus Rhizosphere	MIRSIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIKTRGDNDPLWPMYAAE*
Ga0075424_1012576211	3300006904	Populus Rhizosphere	QRGVIDTRHITTRYFPLTAVNEALDYIKTRGDNDPLWPMYAAE*
Ga0075424_1024343332	3300006904	Populus Rhizosphere	IRSIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE*
Ga0075436_1003277194	3300006914	Populus Rhizosphere	TRHITTRYFPLTAVNEALDYIEKRGDNDPLWPMYAAE*
Ga0075436_1012200722	3300006914	Populus Rhizosphere	MIRSIEFTSVTGRFAMDVAELLQLVQPGVIDTRHITTRYFPLTAVNEALDYIKTRGDSDPLWPMYAAE*
Ga0075419_111065462	3300006969	Populus Rhizosphere	CFAMDVAELLQLVQRGVIDTRHITTRYFPLTAVNGALDYIKTRGDNDPLWPMYAAE*
Ga0075419_111896761	3300006969	Populus Rhizosphere	GRFAMDVAELLQLVQRGVIDTRHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE*
Ga0066710_1035929911	3300009012	Grasslands Soil	ARDVTELLQLVQRGVIHTRNITTRHFPLTAVNEALDYIEKRGDEEPLWPMYAAD
Ga0111539_118549001	3300009094	Populus Rhizosphere	LLELARRGVIDTRHVTTRVFPLEKVNDAIDYIAKRGDDDPLWPMYAPDA*
Ga0075418_105887161	3300009100	Populus Rhizosphere	SVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE
Ga0066709_1005937552	3300009137	Grasslands Soil	MDVAELLELVQRGVIDTRHITMRYFPLSDVNEALDYIEKRGDNDPLWPMYAAE*
Ga0114129_120326731	3300009147	Populus Rhizosphere	MQPQTAVRWDAELVQRGVIDTRHITTRHFPLTAVNEVLDYIEKRGDNDPLRPMYAAE*
Ga0114129_123075321	3300009147	Populus Rhizosphere	ELLQLVQRGVIDTRHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE*
Ga0114129_131720252	3300009147	Populus Rhizosphere	AELLELVQRGVIDTRHITTRYFPLADVNEALDYIEKRGDNDPLWPMYAAE*
Ga0114129_133638211	3300009147	Populus Rhizosphere	AMDVAELLELVQRGVIDTRHITTRYFPLADVNAALDYIEKRGDNDPLWPMYAAE*
Ga0105092_109357251	3300009157	Freshwater Sediment	ARPHDRPPGRLAQCGVIDTRHISTRYFPLTGVNEALDYIEKRGDNDPLWPMYAAE*
Ga0105242_126040261	3300009176	Miscanthus Rhizosphere	LLELARRGVIDTRHVTTRVFPLEKVNDAIDYIAKRGDDEPLWPMYAPDA*
Ga0114945_100136101	3300009444	Thermal Springs	DFPELLELARRGVIDTRHVTTRYFPLEAVNEALDYIEKRGDDDPLWPMYAPDA*
Ga0105249_109781922	3300009553	Switchgrass Rhizosphere	RHITTRYFSLTAVNEALDYIKTRGDNDPLWPMYAAE*
Ga0105252_103166781	3300009678	Soil	RFAMDVAELLQLVQRGVIDTRHITTRYFPLAKVNEALDYIEKRGDNDPLWPMYAAE*
Ga0126374_117863231	3300009792	Tropical Forest Soil	QLVQRGVIDTRHITTRYFPLAEVNEALDYIEKRGDSDPLWPMYAAE*
Ga0105070_10284662	3300009815	Groundwater Sand	FAMDVAELLELAQRGVIDTRHITTRYFPLSAVNDALDYIKTRGDNDPLWPMYAAD*
Ga0126380_114378821	3300010043	Tropical Forest Soil	AMDVAELLQLVQRGVIDTRHITTRYFPLTAVNQALDYIEKRRDDDPLCPMYAAD*
Ga0126382_108538462	3300010047	Tropical Forest Soil	VTGRFAMDVAELLQLVQRGVIDTHHITTRYFPLTAVNQALDYIEKRRDDDPLWPMYAAV*
Ga0126373_101204643	3300010048	Tropical Forest Soil	SIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIKTRGENDPLWPMYAAD*
Ga0126373_126763422	3300010048	Tropical Forest Soil	ELLQLVQRGVIDTRHITTRYFPLAAVNEALDYIKTRGENDPLWPMYAAE*
Ga0126306_113980611	3300010166	Serpentine Soil	VQRGVIDTRHITRRYFLLAAVNKALDYIKTRGDNDPLWPMYAAE*
Ga0134088_104570531	3300010304	Grasslands Soil	TRHITTRYFPLSDVNEALDYIEKRGDSDPLWPMYAAE*
Ga0134071_100316481	3300010336	Grasslands Soil	MDVAELLQLVQHGVIDTRHITTRYFPLTAVNDALDYIKTRGDNDPLWPMYAAE*
Ga0126376_131016301	3300010359	Tropical Forest Soil	EFTSVTGRFAMDVAELLQLVQRGVINTRHITTRYFPLADVNEALDYIEKRGDNDPLWPMYAAD*
Ga0126378_129362812	3300010361	Tropical Forest Soil	RHITTRYFPLADVNEALDYIEKRGDSDPLWPMYAAD*
Ga0126377_110118763	3300010362	Tropical Forest Soil	VQRGVIDTRHITTRYFSLAQVNEALDYIEKRGDDEPLWPMYAAD*
Ga0136847_135311691	3300010391	Freshwater Sediment	LVQRGVIDTRHITTRYFPLTAVNEALDYIEKRGDNDPLWPMYAAD*
Ga0126383_116945281	3300010398	Tropical Forest Soil	RFAMDVAELLELVQRGVIDTRHITTRYFPLSAVNEALDYIETRGDTDPLWPMYAVD*
Ga0134127_127015881	3300010399	Terrestrial Soil	VIDTRHITTRYFPLADVNEALDYIKTRGDNDPLWPMYAAE*
Ga0134123_111294152	3300010403	Terrestrial Soil	YIDFPELLELARRGVIDTRHVTTRCFPLEAVNDAIDYIAKRGDDEPLWPMYAPDA*
Ga0138514_1001254691	3300011003	Soil	LVQRGVIDTRHITTRYFPLADVNEALDYIKTRGDNDPLWPMYAAE*
Ga0137426_10688911	3300011435	Soil	MDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIEKRGDNDPLWPMYAAD*
Ga0137374_100967705	3300012204	Vadose Zone Soil	VIDTRHIPARYFPLADVNEALDYIEKRGDNDPLWPMYAAE*
Ga0137374_103297432	3300012204	Vadose Zone Soil	MDVAELLQLMQRGVIDTRHITTGYFPPTAVNDALDYIKTRGDSDPLWPMYAAE*
Ga0137374_109744391	3300012204	Vadose Zone Soil	MDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIKTRGDSDPLWPMYAAE*
Ga0137380_106720002	3300012206	Vadose Zone Soil	MDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIKTRGDSDPLWPMYATE*
Ga0137381_102947565	3300012207	Vadose Zone Soil	IDTRHITTRYFPLAAVNEALDYIEKRGDNDPLWPMYAAE*
Ga0137376_101759024	3300012208	Vadose Zone Soil	QITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE*
Ga0137376_102716854	3300012208	Vadose Zone Soil	SIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIEKRGDNNPLWPMYAAE*
Ga0137376_113899751	3300012208	Vadose Zone Soil	TSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIKTRGDSDPLWPMYATE*
Ga0137376_115881031	3300012208	Vadose Zone Soil	LLQLVQRGVIDTRHITTRYFPLTAVNEALDYIKTRGDDDPLWPMYAAQ*
Ga0137378_110335741	3300012210	Vadose Zone Soil	ITTRYFPLTAVNEALDYIKTRSDSDPLWPMYAAE*
Ga0137377_115926552	3300012211	Vadose Zone Soil	VQSGVIDTRHITTRYFPLTAVNEALDYIKTRSASDPLWPMYAAE*
Ga0137435_12378512	3300012232	Soil	IRSIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIEKRGDNDPLWPMYAAD*
Ga0137370_100926234	3300012285	Vadose Zone Soil	LQLVQRGVIDTRHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE*
Ga0137387_106707321	3300012349	Vadose Zone Soil	RNGVIDTRHITTRYFPLTAVNEALDYIEKRGDDDPLWPMYAAE*
Ga0137372_100995135	3300012350	Vadose Zone Soil	IRSIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLADVNEALDYIEKRGDNDPLWPMYAAE*
Ga0137367_102291862	3300012353	Vadose Zone Soil	MDVAELLQLVQRGVIDTRHITTRYFPLTAVNDALDYIKTRGDSDPLWPMYAAE*
Ga0137368_107616861	3300012358	Vadose Zone Soil	DTRHITTRYFPLTAVNEALDYIKTRGDSDPLWPMYAAE*
Ga0137368_109265131	3300012358	Vadose Zone Soil	VQRGVIDTRHITTRYFPLADVNEALDYIKPRGDNDPLWPMYAAE*
Ga0137375_105036612	3300012360	Vadose Zone Soil	MHQKFGGRGGVIDTRHITTRYFLLTAVNEALDYIEKRGDDDSLWPMYAAE*
Ga0157316_10073592	3300012510	Arabidopsis Rhizosphere	GRFAMDVAELLQLVQHGVIDTHQMTTGYFPLAAANEALDYIKTRGDNDPLWPMYAAE*
Ga0137373_104594701	3300012532	Vadose Zone Soil	IEFTSVTGRFAMDVAELLQLVQSGVIDTRHITTRYFPLTAVNEALDYIKTRGDSDPLWPMYAAE*
Ga0137416_109819511	3300012927	Vadose Zone Soil	GRHYIDFPELLELARRGVIDTRHVTTRVFPLEKVNDAIDYIAKRGDDEPLWPMYAPDA*
Ga0137404_101724243	3300012929	Vadose Zone Soil	MDVAELLQLVQRGVIDTRHITTRYFPLTDVNEALDYIEKRGDNDPLWPMYAAE*
Ga0137404_105818123	3300012929	Vadose Zone Soil	ELLLLVQRGVIDTRHITTRYFPLTDVNEALDYIEKRGDNDPLWPMYAAE*
Ga0137404_123151572	3300012929	Vadose Zone Soil	MDVAELQLVQCGVIDTRHITTRYFPLSAVNEALDYIEKRGDDDPLWPMYAAD*
Ga0137407_105992651	3300012930	Vadose Zone Soil	IEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIKTRGDSDPLWPMYAAE*
Ga0137407_109528473	3300012930	Vadose Zone Soil	DVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIKKRGDNDPLWPMYATE*
Ga0137407_117830042	3300012930	Vadose Zone Soil	SIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIETRGDDDPLWPMYAAD*
Ga0164303_110693541	3300012957	Soil	MDVAELLQLVQRGVIDTHHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE*
Ga0164309_110390311	3300012984	Soil	RGVIDTRHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE*
Ga0164305_104320271	3300012989	Soil	LLQLVQNGVIDTRHITTRYFPLADVNEALDYIEKRGDNDPLWPMYAAG*
Ga0180084_11130432	3300014874	Soil	RHYIDFPELLELARRGVIDTRHVTTRNFPLASVNDAIDYIAKRGDDEPLWPMYAPDA*
Ga0180083_11341691	3300014875	Soil	RHITTRYFPLTAVNEALDYIEKRGDNDPLWPMYAAD*
Ga0180104_10113113	3300014884	Soil	ELLELARRGVIDTRHVTTRNFPLASVNDAIDYIAKRGDDEPLWPMYAPDA*
Ga0180104_10391014	3300014884	Soil	IDKRHITTRYFPLNAVNEALDYIEKRGDNDPLWPMYAAH*
Ga0137403_101647792	3300015264	Vadose Zone Soil	MDVAELLQLVQRGVIDTRHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE*
Ga0132257_1004751591	3300015373	Arabidopsis Rhizosphere	QLVQRGVIETRHITTRYFPLAAVNEALDYIEKRGDNDPLWPMYVAD*
Ga0132257_1012390042	3300015373	Arabidopsis Rhizosphere	DFPELLELARRGVIDTRHVTTRVFPLEKVNDAIDYIAKRGDDEPLWPMYAPDA*
Ga0182034_107823262	3300016371	Soil	YIDFPELLELARRGVIDTRHVTTRFFPLEKVNDAIDYIVKRGDDEPLWPMYAPDA
Ga0184608_105331032	3300018028	Groundwater Sediment	RHYIDFPELLELARRGVIDTRHVTTRFFPLERVNDAIDYIAKRGDDEPLWPMYAPDA
Ga0184623_102356991	3300018056	Groundwater Sediment	TSVTGRFAMDVAELLQLVQCGVIDTRHITTRYFPLTAVNEALDYIEKRGDNDPLWPMYAA
Ga0184619_100530841	3300018061	Groundwater Sediment	IDTRHITTRYFPLTEVNEALDYIKTRGDNDPLWPMYAAE
Ga0184640_100066361	3300018074	Groundwater Sediment	NTRHVTTRHFPIEGLNEALDYIEKRGEDEPVWPMYAAS
Ga0184632_101169461	3300018075	Groundwater Sediment	AMDVAELLQLVQSGAIDTRHITTRYFPLTAINEALDYIEKRGDNDPLWPMYAAD
Ga0184639_100426121	3300018082	Groundwater Sediment	AELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIEKRGDNDPLWPMYAADAKPFSNMAEG
Ga0066655_107166873	3300018431	Grasslands Soil	VQRGVIDTRHITTRYFPLTAVNEALDYIKTRGDSDPLWPMYAAE
Ga0066662_129524111	3300018468	Grasslands Soil	LQLVQRGVIDTRHITTRYFPLADVNEALDYIENRGDNDPLWPMYAVDRAGGKVSM
Ga0193715_10672881	3300019878	Soil	IDTRHITTRYFPLAAVNEALDYIEKRGDNDPLWPMYAAE
Ga0193735_10842821	3300020006	Soil	QLVQRGVIDTRHITTRYFPLTAVNEALDYIKTRGDNDPLWPMYAAE
Ga0210378_100091871	3300021073	Groundwater Sediment	PELLELARRGVIDTRHVTTRFFPLERVNDAIDYIAKRGDDEPLWPMYAPEA
Ga0210381_103376332	3300021078	Groundwater Sediment	TSVTGRFAMDVAELLLLVQRGVIDTRHITTRYFPLADVNEALDYIKTRGDNDPLWPMYAA
Ga0210384_109230261	3300021432	Soil	AMDVAELLQLVQRGVIDTRHITTRYFPLAAVNEALDYIEKRGDDDPLWPMYAAE
Ga0224452_11199852	3300022534	Groundwater Sediment	HITTRYFPLADVNEALDYIDNRGDSDPLWPMYAAD
Ga0212128_100236053	3300022563	Thermal Springs	VTGRHYTDFPELLELARRGVIDTRHVTTRYFPLEAVNEALDYIEKRGDDDPLWPMYAPDA
Ga0209399_100087491	3300025157	Thermal Springs	LARRGVIDTRHVTTRYFPLEAVNEALDYIEKRGDDDPLWPMYAPDA
Ga0207684_103944721	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	FAMDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIKTRGENDPLWPMYAAE
Ga0207661_117085623	3300025944	Corn Rhizosphere	DELITKRYRLEEINEALDYIEERGENDPAWPMYAAE
Ga0209801_10678151	3300026326	Soil	DFPELLELARRGVIDTRHVTTRFFPLERVNDAIDYIAKRGDDEPLWPMYAPDA
Ga0209266_11626173	3300026327	Soil	LMIRSIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLSDVNEALDYIEKRGDNDPLWPMYAAE
Ga0209803_10926942	3300026332	Soil	VRRGVIDTRHITTRYFPLSDVNEALDYIEKRGDNDPLWPMYATE
Ga0209376_10556673	3300026540	Soil	YLMIRSIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLAAANKALDYIKTRGDNDPLWPMYAAE
Ga0209814_100982651	3300027873	Populus Rhizosphere	LLELVQRGVIDTRHITTRYFPLTAVNEALDYIKTRGDSDPLWPMYAAE
Ga0209814_104569821	3300027873	Populus Rhizosphere	LLELARRGVIDTRHVTTRLFPLERVNDAIDYIAKRGDDEPLWPMYAPDA
Ga0207428_103143373	3300027907	Populus Rhizosphere	HITTRYFPLADVNEALDYIKTRGDSDPLWPMYAAE
Ga0207428_105501532	3300027907	Populus Rhizosphere	LVQRGVIDTRHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE
Ga0207428_106493681	3300027907	Populus Rhizosphere	GVIDTRHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE
Ga0209382_102326623	3300027909	Populus Rhizosphere	ELLELARRGVIDTRHVTTRFFPLESVNDAIDYIAKRGDDEPLWPMYAPDA
Ga0209853_10290101	3300027961	Groundwater Sand	LARRGVIDTRHVTARYFPLAQVNEAIDYIANRGDDEPLWPMYAPDA
Ga0268265_116484612	3300028380	Switchgrass Rhizosphere	IDTRHITTRYFPLADVNEALDYIKTRGDNDPLWPMYATE
Ga0307500_102256111	3300031198	Soil	ELLQLVQRGVIDTRHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE
Ga0306917_108712322	3300031719	Soil	FPELLELARRGVIDTRHVTTRFFPLEKVNDAIDYIVKRGDDEPLWPMYAPDA
Ga0307468_1011153111	3300031740	Hardwood Forest Soil	VQRGVIDTRHITTRYFPLSAVNEALDYIVKRGDDDPLWPMYATE
Ga0307473_101969021	3300031820	Hardwood Forest Soil	LLQLVQRGVIDTRHITTRYFPLAAANEALDYIKTRGDNDPLWPMYAAE
Ga0307473_102087483	3300031820	Hardwood Forest Soil	GVIDTRHITTRYFPLSAAYEALVYFKTRGDNDPLWPMYATE
Ga0307473_105459712	3300031820	Hardwood Forest Soil	TGRFAMDVAELLLLVQRGVIDTRHITTRYFPLADVNEALDYIEKRGDNDPLWPMYAAD
Ga0310911_106132732	3300032035	Soil	ELARRGVIDTRHVTTRFFPLEKVNDAIDYIAKRGDDEPLWPMYAPDA
Ga0307471_1022807991	3300032180	Hardwood Forest Soil	MIRSIEFTSVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIEKRGDNDPLWPMYAAD
Ga0307472_1016410741	3300032205	Hardwood Forest Soil	SVTGRFAMDVAELLQLVQRGVIDTRHITTRYFPLNAVNEALDYIEKRGDNDPLWPMYAAD
Ga0335084_102149181	3300033004	Soil	LARRGVIDTRHVTTRYFPVEAANEAIDYIEKRRDDEPLWPMYAADV
Ga0364928_0084293_579_734	3300033813	Sediment	VAELLQLVQRGVIDTRHITTRYFPLTAVNEALDYIEKRGDNDPLWPMYAAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F040022

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences