Metagenome / Metatranscriptome Family F040195

Basic Information
Family ID	F040195
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	54 residues
Representative Sequence	RAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Number of Associated Samples	128
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (35.185 % of family members)
Environment Ontology (ENVO)	Unclassified (40.123 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.531 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 11.39% Coil/Unstructured: 88.61%
Feature Viewer

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Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF00873	ACR_tran	96.30
PF10518	TAT_signal	0.62
PF00239	Resolvase	0.62
PF16576	HlyD_D23	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.62
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.62

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.98%
Host-Associated	Host-Associated	8.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.98%
Plants	Host-Associated → Plants	8.02%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.47%
Peat	Environmental → Terrestrial → Peat	1.23%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.86%
Loam	Environmental → Terrestrial → Soil → Loam	9.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	35.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.23%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.23%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1017232272	3300002245	Forest Soil	LRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
JGI25382J43887_103310841	3300002908	Grasslands Soil	VMVAQDRAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
JGIcombinedJ51221_101307121	3300003505	Forest Soil	NLRKVQLGTTHDNSVAVEGLQPGERVVSVGAQLLKDGDPIQAIP*
Ga0066679_107945881	3300005176	Soil	EPEHFAVMVAQDRGGTLIATLRKIQLGATQDNSVAVEGVQPGERVVSVGAQLLRDGDSIQAIP*
Ga0066688_106603581	3300005178	Soil	NLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0066675_101707381	3300005187	Soil	LVANLRKVRLGTTHENSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0070709_108028651	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PSEPDHFAVMVAQDRAGRLVASLRKVQLGTTHDNSVAVEGLQPGERVVSVGAQLLKDGDPIQAIP*
Ga0070711_1003999861	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AGRLVASLRKVQLGTTHDNSVAVEGLQTGERVVSVGAQLLKDGDPIQAIP*
Ga0070708_1006168822	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	FAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0070708_1013497611	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RLVANLRKVQLGTTHDNSVAVEGVEPGERVVSVGAQLLKDGDPIQVIP*
Ga0066687_104696531	3300005454	Soil	GRLVATLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0070707_1022823542	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLRDGDSIQVIP*
Ga0070699_1001245221	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLRDGDPIQAIP*
Ga0070732_110186921	3300005542	Surface Soil	EPDHFAVMVAQDRAGRLVASLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0066701_101408702	3300005552	Soil	PDHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0066701_104031891	3300005552	Soil	HFAVMVAQDRAGRLVANLRKVQLGPTHDNSVSVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0066695_103352561	3300005553	Soil	GALVANLRKVQLGTTHDNAVSVDGVEPGERIVSVGAQLLKDGDAIQAIP*
Ga0066700_100842522	3300005559	Soil	LPSEPDHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0066700_105033021	3300005559	Soil	GTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0066700_108254861	3300005559	Soil	IQMGTTHDSSVAVEGVQLGERVVSVGAQLLKDGDPIQVIP*
Ga0066699_105628782	3300005561	Soil	PSEPDHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0066703_107273321	3300005568	Soil	ISIPLSAIVPFPSEPDHFAVMVVHERAGTLVANLRKIQMGTTHDSSVAVEGVQLGERVVSVGAQLLKDGDPIQVIP*
Ga0066694_102518772	3300005574	Soil	PDHFAVMVAQDRAGRLVANLRKVQLGITHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0066702_106770452	3300005575	Soil	SAIVPLPSEPDHFAVMVAQDRAGRLVASLRKVQLGTTHDNSVAVEGLQPGERVVSVGAQLLKDGDPIQAIP*
Ga0066691_105315721	3300005586	Soil	PLPSEPDHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0066706_108858571	3300005598	Soil	PSEPDHFAVMVAQDRAGRLVATLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0070762_100515651	3300005602	Soil	EHFAVMVAQERAGTLVANLRKVQLGTTHDNSVAVEGVQTGERVVSVGAQLLKDGDPIQVIP*
Ga0068858_1005101771	3300005842	Switchgrass Rhizosphere	SEPGHFAVMVAQERAGALVAKLRRVQLGTTHDNSVAVEGVQPGERVVSVGAQLLRDGDPIQVIP*
Ga0070765_1008403062	3300006176	Soil	VQLGATHDNSVVVEGVQPGERVVSVGAQLLKDSDPIQVIP*
Ga0066658_102829711	3300006794	Soil	LSAVVPFPSEPEHFAVMVAQERAGALVANLRKVQLGTTHDNAVSVDGVEPGERIVSVGAQLLKDGDAIQAIP*
Ga0066665_110573002	3300006796	Soil	GTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQPIP*
Ga0066659_101152312	3300006797	Soil	EPDHFAVMVAQDRAGRLVANLRKVQLGITHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0075428_1001761362	3300006844	Populus Rhizosphere	IQVMAVYDNSVSAEGVQPGERVVSAGAQLVKDGDLVQVIP*
Ga0075431_1001332692	3300006847	Populus Rhizosphere	AVYDNSVSAEGVQPGERVVSAGAQLVKDGDLVQVIP*
Ga0068865_1019849511	3300006881	Miscanthus Rhizosphere	QVGATHDNSVAVEGVQPGERVVSVGAQLLKDGDLIQAIP*
Ga0066710_1003962371	3300009012	Grasslands Soil	RLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQLIP
Ga0066710_1014136292	3300009012	Grasslands Soil	RLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP
Ga0099829_101242291	3300009038	Vadose Zone Soil	AGRLVANLRKVQLGTTHDNSVAVGGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0099828_100053401	3300009089	Vadose Zone Soil	GRLVANLRKVQLGATHDNTVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0099828_106377662	3300009089	Vadose Zone Soil	VAQDRAGRLVANLRKVQLGATHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0099827_106655461	3300009090	Vadose Zone Soil	PSEPDHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVEVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0066709_1003337671	3300009137	Grasslands Soil	HDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0066709_1004136341	3300009137	Grasslands Soil	TTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0099792_101929112	3300009143	Vadose Zone Soil	VANLRKIQMGTTHDSSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0099792_111577951	3300009143	Vadose Zone Soil	TTHDNSVAVEGVQPGERVVSVGAQLLHDGDLIHVIP*
Ga0075423_100753661	3300009162	Populus Rhizosphere	IQLGATQDNSVAVEGVQPGERVVSVGAELLRDGDSIQAIP*
Ga0075423_106862481	3300009162	Populus Rhizosphere	ERGGKLVASLRKVQLGTTHDSSIAVEGVQPGERIVSVGAQLLRDGDPIQVIP*
Ga0105241_117376101	3300009174	Corn Rhizosphere	LVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0126381_1035260991	3300010376	Tropical Forest Soil	IQVRNVYDNSVAVEEVRPGERVVSTGAQLLKDGDPVQVIP*
Ga0126383_125091392	3300010398	Tropical Forest Soil	PGALVARSRNVHIGMIYDNLVAVEGVRPGERVVSLGAPLLKDGDAIQVIP*
Ga0137392_100285673	3300011269	Vadose Zone Soil	PLPSEPDHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVGGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137392_111008991	3300011269	Vadose Zone Soil	LIANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137393_108754741	3300011271	Vadose Zone Soil	FAVMVARERAGKLVANLRKVQLGTTHDNSVAVEGVQPGERVVFVGAQLLKDGDPIQEIP*
Ga0137393_115960302	3300011271	Vadose Zone Soil	GRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137388_100502192	3300012189	Vadose Zone Soil	GTTHDNSVAVEGVQPGERVVSVGAQLLMDGDPIQVIR*
Ga0137388_117113042	3300012189	Vadose Zone Soil	RAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0137365_103961251	3300012201	Vadose Zone Soil	PEQFAVMVAQERAGKLVANVRKVELGATHDNSVAVDGVRAGERIVSVGAQLLKDGDPIQVIP*
Ga0137399_107996201	3300012203	Vadose Zone Soil	IVPLPSEPDHFAVMVAQDHAGKLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137362_100482012	3300012205	Vadose Zone Soil	MVAQDRAGRLVANLRKVQLGTTHDNSVAVGGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137362_117695461	3300012205	Vadose Zone Soil	VQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137376_110230221	3300012208	Vadose Zone Soil	PDHFAVMVAQERAGTLVANLRKIQMGTTHDSSVAVDGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137379_101491812	3300012209	Vadose Zone Soil	TLIATLRKIQLGATQDNSVAVEGIQPGERVVSVGAQLLRDGDSIQVIP*
Ga0137377_114112462	3300012211	Vadose Zone Soil	VPFPAEPDKFAVIVAQERAGKLVANLRKVQLGKTHDNSVAVQGVQPGERIVSIGAQLLKDGDPIQVIP*
Ga0137377_115483532	3300012211	Vadose Zone Soil	AGRLVANLRKVQLGITHDNSVAVEGVQRGERVVSVGAQLLKDGDPIQVIP*
Ga0137377_117321262	3300012211	Vadose Zone Soil	PSEPDHFAVMVAQDRAGRLVANLRKVQMGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0137387_105662162	3300012349	Vadose Zone Soil	VMVAQDRAGRLVANLRKVQLGTTHDNSFAVEGVQPGERVVSVGAQLLQDGDPIQAIP*
Ga0137360_100877601	3300012361	Vadose Zone Soil	VPLPSEPDHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVGGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137361_105712571	3300012362	Vadose Zone Soil	KVQLGPTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0137390_101384871	3300012363	Vadose Zone Soil	SEPDHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVGGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137390_110655212	3300012363	Vadose Zone Soil	PFPSEPEQFAVMVAQNRAGALIANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLHDGDLIHVIP*
Ga0137398_102092422	3300012683	Vadose Zone Soil	PSEPEHFAVMVAQDHAGTLIANLRKVQLGTTNDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137398_102528301	3300012683	Vadose Zone Soil	VQLGATNESSNAVGGVQLGEKVVAVCAQLLKDGDPIEVIP*
Ga0137397_112249591	3300012685	Vadose Zone Soil	KLVANLRKIQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0137397_112459421	3300012685	Vadose Zone Soil	GTLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQTIP*
Ga0137395_101263012	3300012917	Vadose Zone Soil	LRKIQLGTTYDNSVAVEGVQPGERIVSVGAQLLKDGDPIQVIP*
Ga0137395_101673132	3300012917	Vadose Zone Soil	PSAPEQFAVMVAQERAGKLVANVRKVELGATHENSVSVGGVQPGERIVSVGAQLLKDGDPIQVIP*
Ga0137395_102280791	3300012917	Vadose Zone Soil	THDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137396_105851682	3300012918	Vadose Zone Soil	FAVMVAEESASTLVANLRKVQLGTTHESSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137396_108596842	3300012918	Vadose Zone Soil	FPSEPEHFAVMVAQERAGTLVANLRKVRLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137416_109178801	3300012927	Vadose Zone Soil	RLVANLRKVQLGTTHDNSVAVEGIQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137404_103486321	3300012929	Vadose Zone Soil	KVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0137410_100210501	3300012944	Vadose Zone Soil	PEHFAVMVAQERANKLIASLRRVQLGATHDNSVAVGGVQPGERVVSVGAQLLKDGDPIQEIP*
Ga0137410_106183281	3300012944	Vadose Zone Soil	GTTQDDSVAVEGVQPGERVVSVGAQLLKDGDRIQVIP*
Ga0137410_110427461	3300012944	Vadose Zone Soil	RLVANLRKVQLGATHDNSAAVEGVQPGERIVSVGAQLLQDGDTIQVIP*
Ga0164303_112207152	3300012957	Soil	FAVMVAQDRAGGLIASLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP*
Ga0137405_11817741	3300015053	Vadose Zone Soil	GRLVANNLRKVQLGATHDDSVAVEGVQPGERVVSVGAQLLNDGDAIQAIP*
Ga0137420_10305981	3300015054	Vadose Zone Soil	GRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0137420_12182172	3300015054	Vadose Zone Soil	VPFPAEPDHFAVMVVQDRAGRLVANLRKVQMGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP*
Ga0137409_106467222	3300015245	Vadose Zone Soil	THDDSVAVEGVQPGERVVSVGAQLLKDGDRIQVIP*
Ga0132256_1018227182	3300015372	Arabidopsis Rhizosphere	MIQVMAVYDNSVSAEGVQPGERVVSTGAQLVKDGDLVQVIP*
Ga0132257_1002122431	3300015373	Arabidopsis Rhizosphere	HDNSVAVEGVRPGERIVSVGAQLLKDGDPIQAIP*
Ga0134069_11713312	3300017654	Grasslands Soil	FAVMVAQDRAGRLVANLRKVQLGITHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0066669_109276492	3300018482	Grasslands Soil	SAIVPLPSEPDHFAVMVAQDRAGRLVANLRKIQLGTTHDNSVAVEGIQPGERVVSVGAQLLKDGDPIQVIP
Ga0137408_14227727	3300019789	Vadose Zone Soil	MVAQDRAGRLVQLAQGSVGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPSNATS
Ga0193731_10805391	3300020001	Soil	LLAKLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0179594_100888222	3300020170	Vadose Zone Soil	GTTHDNSVAVEGVQSGERVVSVGAQLLKDGDPIHVIP
Ga0179592_103894062	3300020199	Vadose Zone Soil	SSIVPLPSEPEHFAVMVAQDHAGTLIANLRKVQLGTTNDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0210403_105174982	3300020580	Soil	RLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0210399_112876001	3300020581	Soil	ERAGRLVANLRKVQLGATHDNSVAVEGVQSGERVVSVGAQLLKDGDPIQVIP
Ga0210401_107557642	3300020583	Soil	PSEPEQFAVMVAQERAGTLVAHLRKVQLGATHDNSVAVEGVQPGERVVSVGAQLLKDGDTIREIP
Ga0215015_107757311	3300021046	Soil	LIANLRKVQLGTTHDNSVAVDGVQPGELVVSVGAQLLKDGDPIQAIP
Ga0179596_101052621	3300021086	Vadose Zone Soil	GRLVANLRKVQLGTTHDNSVAVGGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0210404_101016992	3300021088	Soil	PLSAIVPFPSEPDHFAVMVAQDRAGKLVANLRKVHLGATHDNSVVVAGVQPGERVVSVGAQLLKDGDPIQAIP
Ga0210406_101152742	3300021168	Soil	QERAGTLVANLRKVQLGTTHDNSVAVEGVQPGERVVSEGAQLLKDGDPLRVIP
Ga0210406_101737292	3300021168	Soil	SAIVPFPSETDHFAVMVAQDRAGRLVANLRKVQLGPTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0210406_104781561	3300021168	Soil	ANLRKVQLGATHDNSVAVEGVQPGERVVSVGAQLLKDGDAIQVIP
Ga0210396_107535782	3300021180	Soil	EPDHFAVMVAQEHTGTLVANLRKVQLGATHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP
Ga0210385_103063721	3300021402	Soil	PDQFAVMVAQERAGTLVARLRKVQLGATHDNSVAVEGVQPGERVVSVGAQLLKDGDTIREIP
Ga0193709_10041682	3300021411	Soil	MVAQERAGTLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP
Ga0210392_100939411	3300021475	Soil	PSEPDHFAVMIAQDRAGKLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0210402_113605841	3300021478	Soil	PFPSETDHFAVMVAQDRAGRIVANLRKVQLGPTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0210409_106124812	3300021559	Soil	RAGGLIASLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0126371_135213241	3300021560	Tropical Forest Soil	SRNVQIGMIHDNLVAVEGVRPGERVVSLGAPLLKDGDAIQVIP
Ga0179589_104008862	3300024288	Vadose Zone Soil	AIVPLPAEPDHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0207710_106721342	3300025900	Switchgrass Rhizosphere	PDHFAVMVAQERAGALVAKLRRVQLGTTHDNSVAVEGVQPGERVVSVGAQLLRDGDPIQVIP
Ga0207684_103188302	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	NLRKVQLGRTNDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP
Ga0207671_112830681	3300025914	Corn Rhizosphere	PSEPDHFAVMVAQERAGALVAKLRRVQLGTTHDNSVAVEGVQPGERVVSVGAQLLRDGDPIQVIP
Ga0207711_121478772	3300025941	Switchgrass Rhizosphere	EPDHFAVMVAQERAGALVAKLRRVQLGTTHDNSVAVEGVQPGERVVSVGAQLLRDGDPIQVIP
Ga0207703_112238281	3300026035	Switchgrass Rhizosphere	SEPGHFAVMVAQERAGALVAKLRRVQLGTTHDNSVAVEGVQPGERVVSVGAQLLRDGDPIQVIP
Ga0209154_10131331	3300026317	Soil	AVMVAQDRAGRLVASLRKVQLGTTHDNSVAVEGLQPGERVVSVGAQLLKDGDPIQAIP
Ga0209471_10691432	3300026318	Soil	RAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0209687_13130012	3300026322	Soil	THDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0209267_11042872	3300026331	Soil	HFAVMVAQDRAGRLVASLRKVQLGTTHDNSVAVEGLQPGERVVSVGAQLLKDGDPIQAIP
Ga0209377_11329882	3300026334	Soil	PSEPEHFAVMVAQERAGALVANLRKVQLGTTHDNAVSVDGVEPGERIVSVGAQLLKDGDAIQAIP
Ga0257166_10133912	3300026358	Soil	THDNSIAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0257146_10828851	3300026374	Soil	AIVPLPSEPDHFAVMVAQDRAGRLVANLRKVRLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0257153_10752521	3300026490	Soil	EPEQFAVMVAQNRAGALIANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLHDGDLIHVIP
Ga0257157_10348982	3300026496	Soil	NLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLHDGDLIHVIP
Ga0257181_10504751	3300026499	Soil	FAVMVAEERAGTLVANLRKVQLGTTHESSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0257168_10099211	3300026514	Soil	EPDHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0209059_13170542	3300026527	Soil	EPDHFAVMVAQDRAGRLVASLRKVQLGTTHDNSVAVEGLQPGERVVSVGAQLLKDGDPIQAIP
Ga0209378_10351101	3300026528	Soil	FAVMVAQERAGALVANLRKVQLGTTHDNAVSVDGVEPGERIVSVGAQLLKDGDAIQAIP
Ga0209161_100823781	3300026548	Soil	VELGATHDNSVAIDGVLPGERIVSVGAQLLKDGDPIQVIP
Ga0179587_108152301	3300026557	Vadose Zone Soil	NLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0179587_108763181	3300026557	Vadose Zone Soil	TQDNSVAVEGVQPGERVVSVGAQLLRDGDSIQVIP
Ga0209332_10108241	3300027439	Forest Soil	IVPFPSEPEHFAVMVAQERAGTLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP
Ga0209179_10308802	3300027512	Vadose Zone Soil	AIVPLPSEPDHFAVMVAQDRAGTLVANLRKIQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP
Ga0209735_11480481	3300027562	Forest Soil	DHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVSVEGVQPGERVVSVGAQLLKDGDPIQAI
Ga0209117_10372122	3300027645	Forest Soil	TTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0209388_11627901	3300027655	Vadose Zone Soil	RKVQLGTTHDSSVAVEGVLPGERVVSVGAQLLRDGDPIQVIR
Ga0209626_10140891	3300027684	Forest Soil	RLIANLRKVQLGTTHDNSVAVEGVQPGERIVSVGAQLLKDGDPIQAIP
Ga0209180_103340981	3300027846	Vadose Zone Soil	PSEPDHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP
Ga0209274_106041962	3300027853	Soil	GRLVANLRKVQLGTTHDNSVAVEGLQPGERVVSVGAQLLKDGDPIQAIP
Ga0209283_109616101	3300027875	Vadose Zone Soil	PLPSEPDHFAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP
Ga0209590_103881071	3300027882	Vadose Zone Soil	FAVMVAQDRAGRLVANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0209488_104853122	3300027903	Vadose Zone Soil	RKVQLGTTHDNSVAVEGLQPGERVVSVGAQLLKDGDPIQVIP
Ga0311340_104945521	3300029943	Palsa	DHFAVMVAQDRAGTLVAKLRKIQLGATRDNSVAVEGVQPGEKVVSVGAQLLRDGDPIRVI
Ga0311371_124201291	3300029951	Palsa	FAVMVAQDRAGTLVAKLRKIQLGATRDNSVAVEGVQPGEKVVSVGAQLLRDGDPIRVIP
Ga0073994_123411382	3300030991	Soil	LIANLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLKDGDPIQVIP
Ga0073994_123506401	3300030991	Soil	VAQQRGGTLVANLRKVQLGTTHDNSVAVEGVQPGEQVVSVGAQLLRDGDSIRVIP
Ga0170834_1049552101	3300031057	Forest Soil	LSAIVPLPSEPDHFAVMVAQDRAGRLVANVRKIQLGTTHDNSVAVEGVQPGERVVSVGAQLLRDGDLIQEIP
Ga0170818_1151128711	3300031474	Forest Soil	PEHFAVMVAQQRAGTLIATLRKIQLGATQDNSVAVEGVQPGERVVSVGAQLLRDGDSIQVIP
Ga0307476_102972252	3300031715	Hardwood Forest Soil	AVMVAQECAGTLVVRLRKIQLGATHDNSVEVEGVQPGERVVSVGAQLLKDGDTIREIP
Ga0307469_108383232	3300031720	Hardwood Forest Soil	TLVANLRRVQLGTTHDNSVAVEGVRPGERIVSVGAQLLKDGDPIQVIP
Ga0307469_109984872	3300031720	Hardwood Forest Soil	SEPDHFAVMVAQERAGALVAKLRRVQLGTTHDNSVAVEGVQPGERVVSVGAQLLRDGDPIQVIP
Ga0307469_112463531	3300031720	Hardwood Forest Soil	VAQDRAGRLVASLRKVQLGTTHDDSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP
Ga0307469_121984312	3300031720	Hardwood Forest Soil	DRAGTLVANLRKVQLGTTHDNSVAVEGVRPGERIVSVGAQLLKDGDPIQAIP
Ga0307479_101018251	3300031962	Hardwood Forest Soil	NLRKVQLGTTHDNSVAVEGVQPGERVVSVGAQLLRDGDPIQVIP
Ga0307479_102343911	3300031962	Hardwood Forest Soil	ASLREVQLGATNESSIAVEGVQLGEKVVVVGAQLLKDGDPIEVIP
Ga0307479_106335781	3300031962	Hardwood Forest Soil	HFAVMVAQQRAGTLIATLRKIQLGATQDNSVAVEGVQPGERVVSVGAQLLRDGDSIQVIP
Ga0307471_1014775991	3300032180	Hardwood Forest Soil	THDKSVAVEGVQPGERVVSVGAQLLKDGDPIQAIP
Ga0307471_1033361042	3300032180	Hardwood Forest Soil	EHKGALVAKSRKIQVSAIYDNSAAVEGVQPGEHVVSGGAQLLKDGDPVQVIP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040195

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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