Metagenome / Metatranscriptome Family F040231

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040231
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	56 residues
Representative Sequence	RTRLALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG
Number of Associated Samples	106
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.17 %
% of genes near scaffold ends (potentially truncated)	91.98 %
% of genes from short scaffolds (< 2000 bps)	90.12 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.642 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.951 % of family members)
Environment Ontology (ENVO)	Unclassified (44.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.531 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF00589	Phage_integrase	4.32
PF04392	ABC_sub_bind	3.70
PF12961	DUF3850	2.47
PF00027	cNMP_binding	1.85
PF03401	TctC	1.23
PF04828	GFA	1.23
PF00884	Sulfatase	1.23
PF01527	HTH_Tnp_1	1.23
PF00072	Response_reg	0.62
PF13432	TPR_16	0.62
PF00043	GST_C	0.62
PF02371	Transposase_20	0.62
PF13414	TPR_11	0.62
PF07687	M20_dimer	0.62
PF04325	DUF465	0.62
PF13683	rve_3	0.62
PF05270	AbfB	0.62
PF13676	TIR_2	0.62
PF07690	MFS_1	0.62
PF06439	3keto-disac_hyd	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.70
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.23
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.23
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.62
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.64 %
Unclassified	root	N/A	41.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.64 %
Unclassified	root	N/A	41.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.64 %
Unclassified	root	N/A	41.36 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.21 %
Unclassified	root	N/A	41.36 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.62 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	41.36 %
Unclassified	root	N/A	41.36 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.02 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.79 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.62 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.47 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.62 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.62 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.23 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.62 %
Citreicella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Citreicella	0.62 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.23 %
unclassified Citreicella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Citreicella → unclassified Citreicella	0.62 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.62 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.23 %
Citreicella sp. 357	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Citreicella → unclassified Citreicella → Citreicella sp. 357	0.62 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.62 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT02HZ46H	Not Available	599	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1024455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	952	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10120437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1053181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10121273	Not Available	546	Open in IMG/M
3300000956\|JGI10216J12902_100039522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Citreicella → unclassified Citreicella → Citreicella sp. 357	568	Open in IMG/M
3300001431\|F14TB_100009030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1106	Open in IMG/M
3300001867\|JGI12627J18819_10281110	Not Available	670	Open in IMG/M
3300002245\|JGIcombinedJ26739_101668318	Not Available	536	Open in IMG/M
3300005332\|Ga0066388_100767890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1561	Open in IMG/M
3300005332\|Ga0066388_101269016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1266	Open in IMG/M
3300005332\|Ga0066388_102942723	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005332\|Ga0066388_106343065	Not Available	597	Open in IMG/M
3300005332\|Ga0066388_106581180	Not Available	586	Open in IMG/M
3300005332\|Ga0066388_106606379	Not Available	584	Open in IMG/M
3300005332\|Ga0066388_106742254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300005332\|Ga0066388_108700326	Not Available	504	Open in IMG/M
3300005332\|Ga0066388_108789125	Not Available	501	Open in IMG/M
3300005454\|Ga0066687_10864067	Not Available	539	Open in IMG/M
3300005471\|Ga0070698_101672379	Not Available	589	Open in IMG/M
3300005713\|Ga0066905_101689083	Not Available	581	Open in IMG/M
3300005719\|Ga0068861_100107203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2233	Open in IMG/M
3300005764\|Ga0066903_100349312	All Organisms → cellular organisms → Bacteria	2389	Open in IMG/M
3300005764\|Ga0066903_100901075	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300005764\|Ga0066903_103467236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	850	Open in IMG/M
3300005764\|Ga0066903_103693719	Not Available	823	Open in IMG/M
3300005764\|Ga0066903_105583213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300005764\|Ga0066903_106376657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300005764\|Ga0066903_106713352	Not Available	598	Open in IMG/M
3300005764\|Ga0066903_107322799	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005764\|Ga0066903_107775048	Not Available	551	Open in IMG/M
3300005764\|Ga0066903_108446237	Not Available	525	Open in IMG/M
3300005764\|Ga0066903_109145259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300006028\|Ga0070717_10676060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	937	Open in IMG/M
3300006175\|Ga0070712_100535072	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300006935\|Ga0081246_1380536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	590	Open in IMG/M
3300009090\|Ga0099827_11228315	Not Available	652	Open in IMG/M
3300010043\|Ga0126380_10788695	Not Available	776	Open in IMG/M
3300010043\|Ga0126380_11297243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300010046\|Ga0126384_11259181	Not Available	684	Open in IMG/M
3300010046\|Ga0126384_11396398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300010047\|Ga0126382_10575926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300010047\|Ga0126382_10793259	Not Available	807	Open in IMG/M
3300010358\|Ga0126370_12544806	Not Available	511	Open in IMG/M
3300010366\|Ga0126379_10473146	Not Available	1319	Open in IMG/M
3300010366\|Ga0126379_11020976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	932	Open in IMG/M
3300010366\|Ga0126379_12000887	Not Available	682	Open in IMG/M
3300010376\|Ga0126381_100716161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1432	Open in IMG/M
3300010398\|Ga0126383_10172226	All Organisms → cellular organisms → Bacteria → Proteobacteria	2046	Open in IMG/M
3300010398\|Ga0126383_11841476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300010398\|Ga0126383_12796753	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300010398\|Ga0126383_13587218	Not Available	507	Open in IMG/M
3300010403\|Ga0134123_10404460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1253	Open in IMG/M
3300011269\|Ga0137392_10776652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300011270\|Ga0137391_10461078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1080	Open in IMG/M
3300012022\|Ga0120191_10001072	Not Available	2185	Open in IMG/M
3300012198\|Ga0137364_10154997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1659	Open in IMG/M
3300012198\|Ga0137364_11423418	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300012199\|Ga0137383_10111566	Not Available	1990	Open in IMG/M
3300012201\|Ga0137365_10310352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1168	Open in IMG/M
3300012206\|Ga0137380_10554134	Not Available	1009	Open in IMG/M
3300012350\|Ga0137372_10258635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1366	Open in IMG/M
3300012357\|Ga0137384_11186326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300012357\|Ga0137384_11376263	Not Available	553	Open in IMG/M
3300012358\|Ga0137368_10805538	Not Available	581	Open in IMG/M
3300012359\|Ga0137385_10312370	Not Available	1351	Open in IMG/M
3300012360\|Ga0137375_11116270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300012361\|Ga0137360_10172992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1730	Open in IMG/M
3300012361\|Ga0137360_10731713	Not Available	850	Open in IMG/M
3300012362\|Ga0137361_11151163	Not Available	698	Open in IMG/M
3300012930\|Ga0137407_10145290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2090	Open in IMG/M
3300012971\|Ga0126369_11484358	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300012971\|Ga0126369_11676206	Not Available	725	Open in IMG/M
3300012971\|Ga0126369_12510622	Not Available	601	Open in IMG/M
3300012971\|Ga0126369_13549184	Not Available	511	Open in IMG/M
3300013297\|Ga0157378_11423823	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	736	Open in IMG/M
3300013306\|Ga0163162_10210983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2072	Open in IMG/M
3300016270\|Ga0182036_10202672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1456	Open in IMG/M
3300016294\|Ga0182041_12036167	Not Available	535	Open in IMG/M
3300016294\|Ga0182041_12208562	Not Available	514	Open in IMG/M
3300016357\|Ga0182032_10348614	Not Available	1184	Open in IMG/M
3300016387\|Ga0182040_11401033	Not Available	592	Open in IMG/M
3300016387\|Ga0182040_11661473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	545	Open in IMG/M
3300021178\|Ga0210408_10442953	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300021439\|Ga0213879_10152394	Not Available	671	Open in IMG/M
3300021560\|Ga0126371_11689265	Not Available	757	Open in IMG/M
3300022694\|Ga0222623_10266967	Not Available	659	Open in IMG/M
3300025910\|Ga0207684_11251934	Not Available	612	Open in IMG/M
3300025915\|Ga0207693_10368722	Not Available	1123	Open in IMG/M
3300026118\|Ga0207675_101038745	Not Available	838	Open in IMG/M
3300026298\|Ga0209236_1304410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300027663\|Ga0208990_1176455	Not Available	553	Open in IMG/M
3300028719\|Ga0307301_10269417	Not Available	557	Open in IMG/M
3300028754\|Ga0307297_10120558	Not Available	877	Open in IMG/M
3300031543\|Ga0318516_10659152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300031545\|Ga0318541_10138136	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300031546\|Ga0318538_10007808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	4271	Open in IMG/M
3300031546\|Ga0318538_10586831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300031561\|Ga0318528_10391137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300031561\|Ga0318528_10693095	Not Available	545	Open in IMG/M
3300031572\|Ga0318515_10061196	All Organisms → cellular organisms → Bacteria	1916	Open in IMG/M
3300031573\|Ga0310915_10204681	All Organisms → cellular organisms → Bacteria → Proteobacteria	1380	Open in IMG/M
3300031640\|Ga0318555_10514677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300031640\|Ga0318555_10776344	Not Available	517	Open in IMG/M
3300031668\|Ga0318542_10471217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	652	Open in IMG/M
3300031679\|Ga0318561_10002531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6859	Open in IMG/M
3300031679\|Ga0318561_10177160	Not Available	1152	Open in IMG/M
3300031679\|Ga0318561_10639308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300031680\|Ga0318574_10002430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7227	Open in IMG/M
3300031680\|Ga0318574_10714130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300031719\|Ga0306917_10353431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1142	Open in IMG/M
3300031724\|Ga0318500_10323250	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300031724\|Ga0318500_10429238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300031736\|Ga0318501_10066916	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300031768\|Ga0318509_10301970	Not Available	896	Open in IMG/M
3300031768\|Ga0318509_10552291	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031778\|Ga0318498_10143365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1087	Open in IMG/M
3300031781\|Ga0318547_10521511	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031793\|Ga0318548_10013656	All Organisms → cellular organisms → Bacteria	3268	Open in IMG/M
3300031794\|Ga0318503_10305722	Not Available	516	Open in IMG/M
3300031797\|Ga0318550_10310032	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300031805\|Ga0318497_10361847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	810	Open in IMG/M
3300031805\|Ga0318497_10639828	Not Available	596	Open in IMG/M
3300031819\|Ga0318568_10611860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	678	Open in IMG/M
3300031845\|Ga0318511_10179881	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300031880\|Ga0318544_10137118	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300031890\|Ga0306925_10629134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300031890\|Ga0306925_11132839	Not Available	788	Open in IMG/M
3300031897\|Ga0318520_10035256	All Organisms → cellular organisms → Bacteria → Proteobacteria	2537	Open in IMG/M
3300031897\|Ga0318520_10493360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	755	Open in IMG/M
3300031910\|Ga0306923_10182041	All Organisms → cellular organisms → Bacteria	2400	Open in IMG/M
3300031941\|Ga0310912_10525355	Not Available	922	Open in IMG/M
3300031942\|Ga0310916_10558107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	974	Open in IMG/M
3300031942\|Ga0310916_11499520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	550	Open in IMG/M
3300031945\|Ga0310913_10085212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2114	Open in IMG/M
3300031945\|Ga0310913_10390238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	987	Open in IMG/M
3300031945\|Ga0310913_10613151	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300031946\|Ga0310910_10866404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300031954\|Ga0306926_10748662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1181	Open in IMG/M
3300031954\|Ga0306926_11537679	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300031954\|Ga0306926_12923236	Not Available	512	Open in IMG/M
3300031959\|Ga0318530_10242256	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300032001\|Ga0306922_10505208	Not Available	1288	Open in IMG/M
3300032025\|Ga0318507_10041310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1775	Open in IMG/M
3300032035\|Ga0310911_10010505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4202	Open in IMG/M
3300032044\|Ga0318558_10210780	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300032052\|Ga0318506_10229854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	820	Open in IMG/M
3300032055\|Ga0318575_10159138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1125	Open in IMG/M
3300032059\|Ga0318533_10015212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4750	Open in IMG/M
3300032066\|Ga0318514_10524066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	631	Open in IMG/M
3300032076\|Ga0306924_12423560	Not Available	528	Open in IMG/M
3300032094\|Ga0318540_10365385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300032094\|Ga0318540_10607969	Not Available	526	Open in IMG/M
3300032180\|Ga0307471_104186607	Not Available	509	Open in IMG/M
3300032180\|Ga0307471_104260167	Not Available	505	Open in IMG/M
3300032261\|Ga0306920_100298520	Not Available	2399	Open in IMG/M
3300032261\|Ga0306920_101813963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	860	Open in IMG/M
3300032261\|Ga0306920_103792987	Not Available	553	Open in IMG/M
3300033289\|Ga0310914_10898547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	785	Open in IMG/M
3300033289\|Ga0310914_11731261	Not Available	529	Open in IMG/M
3300033290\|Ga0318519_10820854	Not Available	572	Open in IMG/M
3300033290\|Ga0318519_11066681	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.91%
Host-Associated	Host-Associated	2.47%
Engineered	Engineered	0.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.30%
Plants	Host-Associated → Plants	2.47%
Aquatic	Environmental → Aquatic	0.62%
Solid Waste	Engineered → Solid Waste	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.85%
Sediment	Environmental → Aquatic → Sediment	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.62%
Grass	Engineered → Solid Waste → Grass	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.78%
Loam	Environmental → Terrestrial → Soil → Loam	18.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.62%
Composting	Engineered → Solid Waste → Grass → Composting	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.62%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.62%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.23%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.62%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.62%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006935	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_00203680	2170459016	Switchgrass, Maize And Mischanthus Litter	PAPVEPVAELRARFALAEERLTDLKAMLEDMRRDRDAWREQAQTRLLPAPAAPMPWWRWLRTTG
AF_2010_repII_A01DRAFT_10244551	3300000580	Forest Soil	PFPAPSETTAELRTRLALAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPAATTSWWRWSRKTG*
AF_2010_repII_A1DRAFT_101204372	3300000597	Forest Soil	APVETVAELRTRVALAEERLTELKAMLEDMRRDRDAWREQAQTRVLPAPATPMSWWRWLRTTG*
AF_2010_repII_A100DRAFT_10531811	3300000655	Forest Soil	TVAELRTRVALAEERLTELKAMLEDMRRDRDAWREQAQTRVLPAPATPMSWWRWLRTTG*
AF_2010_repII_A001DRAFT_101212732	3300000793	Forest Soil	PAPVETVAELRTRVALAEERLTELKAMLEDMQRDRDAWREQAQTRLLPAPAAPMSWWRWLRSTG*
JGI10216J12902_1000395221	3300000956	Soil	MAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPADPMSWWRWLRTTG*
F14TB_1000090301	3300001431	Soil	ELKAMLEDMRRDRDAWREQAQTRLLPAPAASMSWWRWLRTTG*
JGI12627J18819_102811101	3300001867	Forest Soil	ELRSRLDLAEERLTELKAMLEDMRRDRDAWREQAQTRLLAAPTASAQWWRWLRRTA*
JGIcombinedJ26739_1016683183	3300002245	Forest Soil	LTQQRLAELKAMLDEMRMERDAWRDQALRLALPAPAPSITLWRWLRSTG*
Ga0066388_1007678902	3300005332	Tropical Forest Soil	VAELRTRLILAEERLSELKAMFEDMRRDRDAWREQAQTRLLPAHAASTSWWRWLRTTGRGGTHVHDDRRPDNAVR*
Ga0066388_1012690163	3300005332	Tropical Forest Soil	APSETMAELRTRVALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG*
Ga0066388_1029427231	3300005332	Tropical Forest Soil	RLALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAPTSWWRWLRTTG*
Ga0066388_1063430652	3300005332	Tropical Forest Soil	LTDLKAMLEDMRRDRDAWREQAQTRMLPAPAAPTSWWRWLRTTG*
Ga0066388_1065811802	3300005332	Tropical Forest Soil	VAELRTRLTLAEERLSELKAMLEDMRRDQDAWREQAQTRLLPAPAARMSWRPWRRTAG*
Ga0066388_1066063792	3300005332	Tropical Forest Soil	VETVAELRTRVVLAEERLTELKAMLEDIQRDRDAWREQAQTHLLPAPATTMSWWRRLRMIG*
Ga0066388_1067422542	3300005332	Tropical Forest Soil	LRTRVALAEERLTELKATLEDMRRDRDAWREQAQTRLLPAPAIPMSWWRWLRSTG*
Ga0066388_1087003261	3300005332	Tropical Forest Soil	KVMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWRRAAA*
Ga0066388_1087891251	3300005332	Tropical Forest Soil	AELRTRLALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG*
Ga0066687_108640671	3300005454	Soil	VYPFPAPVETVAELRTRLALAEERLTELKAMIEDMRRDRDAWREQAQTRLLPAPAAPMSLWRWLRTTG*
Ga0070698_1016723791	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VYPFPASIETVAELRTRLILAEERLSALKAMLEDMRRDRDAWREQAQTRLLPAPVAPTSWWPWRRTAG*
Ga0066905_1016890831	3300005713	Tropical Forest Soil	PVETVAELRTRLTMAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPAARMPWWPWRRTAG*
Ga0068861_1001072035	3300005719	Switchgrass Rhizosphere	VETRAELSSRLDLAEERLTELKAMLEDMRRDRDAWREQAQTRLLAAPAASAPWWRWLRRTA*
Ga0066903_1003493125	3300005764	Tropical Forest Soil	LRSRLALAEERLTELKAMLEDMRRDRDAWREQAQTRLLAPPASPSWWRWPRKTA*
Ga0066903_1009010755	3300005764	Tropical Forest Soil	LRTRLALAEERLTDLKAMLEDMRRDRDAWREQAQTRLLPVPAAPMSWWRWLRTTG*
Ga0066903_1034672361	3300005764	Tropical Forest Soil	LTELKATLEDMRRDRDAWREQAQTRLLAPPTPKSWWQWLRTTG*
Ga0066903_1036937191	3300005764	Tropical Forest Soil	LRTRLALAEERLTDLKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG*
Ga0066903_1055832134	3300005764	Tropical Forest Soil	PFPAPSETMAELRTRLALAEERLSELKAMLEDMRGDRDAWREQAQTRMLPAPPAPISWWRWLRTTG*
Ga0066903_1063766571	3300005764	Tropical Forest Soil	ELRTRLALAEERLTELKAMLEDMRRDRDAWREQTQTRLLPAPAAAMSWWRWLRTTG*
Ga0066903_1067133521	3300005764	Tropical Forest Soil	TELRTRLNLAEERLSELKVMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWRRAAG*
Ga0066903_1073227991	3300005764	Tropical Forest Soil	TATELRTRLTLAEERLSELKVMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWRRTAA*
Ga0066903_1077750482	3300005764	Tropical Forest Soil	TLAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWGRTAG*
Ga0066903_1084462371	3300005764	Tropical Forest Soil	AEERLTELKATLEDMRRDRDAWREQAQTRLLPAPAIPMSWWRWLRSTG*
Ga0066903_1091452591	3300005764	Tropical Forest Soil	SETMAELRTRLALAEERLSELKAMLEDMRRDRDAWREQAQTRMLPPPAAPMSWWRWLRTTR*
Ga0070717_106760604	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ERLTDLKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG*
Ga0070712_1005350722	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLNDMRRDLNAWRDQAQARVLPAPAQKMSWWRWSRITG*
Ga0081246_13805362	3300006935	Tropical Rainforest Soil	PVETVAELRTRLALAEERLTELKAMLEDMQRDRDAWREQTQTRLLPAPAAAMSWWRWLRTTG*
Ga0099827_112283152	3300009090	Vadose Zone Soil	PFPAPVETVPELRSRLALAEERLTELKAILEDMRRDRDAWREQAQTRLLPAPAEPMSWWRWLRTTG*
Ga0126380_107886952	3300010043	Tropical Forest Soil	VAELRTRLALAEERLTELKAMLEDIRRDRDAWREQAQTRLLPAPSAAMSWWRWLRTTG*
Ga0126380_112972432	3300010043	Tropical Forest Soil	AEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPSAAMSWWRWLRTTG*
Ga0126384_112591812	3300010046	Tropical Forest Soil	ELRTRLTMAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPAGRMPWWPWRRTAG*
Ga0126384_113963981	3300010046	Tropical Forest Soil	FPAPVETVAELRTRVALAEERLTELKAMLEEMRRDRDAWREQAQTRLLPAPATPSWWRWLRTTG*
Ga0126382_105759262	3300010047	Tropical Forest Soil	RLALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG*
Ga0126382_107932592	3300010047	Tropical Forest Soil	LRTRAALAEERLTELKSMLEDMRRDRDAWREQARTRLLPAPAAPMSWWRWVRSTG*
Ga0126370_125448061	3300010358	Tropical Forest Soil	KAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG*
Ga0126379_104731463	3300010366	Tropical Forest Soil	LALAEERLTDLKAMLEDMRRDRDVREQAQTRMLPAPAARMSWWPWRRAAA*
Ga0126379_110209763	3300010366	Tropical Forest Soil	VALAEERLTELKATLEDMRRDRDAWREQAQTRLLAPPTPKSWWRWLRATG*
Ga0126379_120008871	3300010366	Tropical Forest Soil	VYPFPAPVETPAELRTRLALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPPPAAPMSWWQWLRTT*
Ga0126381_1007161611	3300010376	Tropical Forest Soil	ETTAELRTRLTLAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPAATTSWWRWSRKTG
Ga0126383_101722261	3300010398	Tropical Forest Soil	MAHQRAALAEERLAELKALLADMQRDRDAWRDQAQRLALPKPDSAPMSWWRWLRTTG*
Ga0126383_118414761	3300010398	Tropical Forest Soil	RTRVALAEERLTELKAMLEDMQRDRDAWREQAQTRLLPAPATRMSWWRWLRTTG*
Ga0126383_127967531	3300010398	Tropical Forest Soil	LTLAEERLSELKVMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWRRTAA*
Ga0126383_135872181	3300010398	Tropical Forest Soil	YPFPAPVETVAELRTRLNLAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPAASLSWWRWLRTTG*
Ga0134123_104044604	3300010403	Terrestrial Soil	TRAELSSRLDLAEERLTELKAMLEDMRRDRDAWREQAQTRLLAAPAASAPWWRWLRRTA*
Ga0137392_107766522	3300011269	Vadose Zone Soil	LKAMLEDMRRDRDAWREQAQTRLLPAPAEPMSWWRWLRTTG*
Ga0137391_104610782	3300011270	Vadose Zone Soil	LRSRLALAEERLTELKAILEDMRRDRDAWREQAQTRLLPAPAEPMSWWRWLRTTG*
Ga0120191_100010721	3300012022	Terrestrial	MLEDMRRDRDAWREQAQTRMLPAPAAPMSWWRWLRSTG*
Ga0137364_101549971	3300012198	Vadose Zone Soil	ELKAMLEDMRRDRDAWREQAQTRLLPTPAASMSWWRWLRTTG*
Ga0137364_114234181	3300012198	Vadose Zone Soil	RLAVAEERLSELRAMLEDMRRDRDAWREQAQTRQLPAPAASTSWWRWLRTT*
Ga0137383_101115664	3300012199	Vadose Zone Soil	MALQRAAVAEQRLSELKAMLADMQRERDAWRDQAQQLAPPKPDAAPMLWWRWLRTTG*
Ga0137365_103103522	3300012201	Vadose Zone Soil	RLALAEERLTELKTMLEDMRRDRDAWREQAQTRLLPAPAATMSRWRWLRTTG*
Ga0137380_105541341	3300012206	Vadose Zone Soil	VAELRTRLALAEERLTDLKAMLEDMRRDRDAWREQAQTRLLPVPAAPMSWWRWLRTTG*
Ga0137372_102586351	3300012350	Vadose Zone Soil	AMLEDMRRDRDAWREQAQTRLLPAPAASMSWWRWLRTTG*
Ga0137384_111863262	3300012357	Vadose Zone Soil	LAEERLSELKAMLGDMRRDRDAWREQAQTRLLPAPAASMSWWRWLRTTG*
Ga0137384_113762631	3300012357	Vadose Zone Soil	ELRTRLTMAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPAGRMPWWPRRRTAG*
Ga0137368_108055381	3300012358	Vadose Zone Soil	KAMLEDMRRDRDAWREQAQTRMLPAPAAPMSWWRWLRSTG*
Ga0137385_103123703	3300012359	Vadose Zone Soil	TVAELRTRLALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAPTSWWRWLRTTG*
Ga0137375_111162702	3300012360	Vadose Zone Soil	VYSFPVPSKTTAELRTRLALAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPAASMSWWRWLRTTG*
Ga0137360_101729925	3300012361	Vadose Zone Soil	ERLSELKAMLEDMRRDRDAWREQAQTRLLPPPAAPMSWWRWLRSTG*
Ga0137360_107317133	3300012361	Vadose Zone Soil	VYPFPAPVETMAELRTRFTLAEERLSELKAMFEDMRRDRDAWREQAQTRLLPAPAARMSWWRWLRTTG*
Ga0137361_111511632	3300012362	Vadose Zone Soil	VAELRSRLALAEERLTELKAILEDMRRDRDAWREQAQTRLLPAPAEPMSWWRWLRTTG*
Ga0137407_101452901	3300012930	Vadose Zone Soil	LAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPVAPMS*
Ga0126369_114843583	3300012971	Tropical Forest Soil	ETVAELRARLGLAEERLTDLKAMLEDMRRDRDAWREQAQTRLLLAPAAPMSWWRWLRTTG
Ga0126369_116762062	3300012971	Tropical Forest Soil	MDFETMAELRTRVALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAVSWWRRLRTTG*
Ga0126369_125106221	3300012971	Tropical Forest Soil	RVYPFPAPVETVAELRTRLALAEERLTDLKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG*
Ga0126369_135491841	3300012971	Tropical Forest Soil	RTRLALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPASAMSWWRWLRTTG*
Ga0157378_114238234	3300013297	Miscanthus Rhizosphere	GSAELKAMLEDMRRDRDAWREQAQTRLLAAPAASAPWWRWLRRTA*
Ga0163162_102109831	3300013306	Switchgrass Rhizosphere	LAEERLTELKAMLEDMRRDRDAWREQAQTRLLAAPAASAPWWRWLRRTA*
Ga0182036_102026721	3300016270	Soil	TRLALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTR
Ga0182041_120361671	3300016294	Soil	PAPVETVAELRTRLALAEQRLSDLKAMLEDMRRDRDAWREQAQTRLLPAPAVPLSWWRWLRTTG
Ga0182041_122085621	3300016294	Soil	LALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0182032_103486143	3300016357	Soil	LRTRLALAEQRLSDLKAMLEDMRRDRDAWREQAQTRLLPAPAVPLSWWRWLRTTG
Ga0182040_114010332	3300016387	Soil	ELKAMLEDMRRDRDAWREQAQTRMLPAPAAPMSWWRWLRSTG
Ga0182040_116614731	3300016387	Soil	RLALAEERLTDLKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG
Ga0210408_104429532	3300021178	Soil	VYPFPAPVEAPAELRARLALADERLAELKAMLEDMRRDRDAWREQAQTRLLPAPPTPMSWWRWLRTTG
Ga0213879_101523941	3300021439	Bulk Soil	VETLAELRTRLALADERLTELKTMLEDMRRDRDAWREQAQRRLLPPPAAPMSWWQWLRTT
Ga0126371_116892653	3300021560	Tropical Forest Soil	FPAPVETVAELRTRLALAEERLTDLKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG
Ga0222623_102669672	3300022694	Groundwater Sediment	MAHQRTAQAEERLSELKAMLEDMRSDRDAWRDQAQRLALPSPQPSLSWWRWLRTSG
Ga0207684_112519341	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MALQRAAVAEQRLSELKAMLADMQRERDAWRDQAQQLAPPKPDAAPMLWWRWLRTTG
Ga0207693_103687221	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VAELRTRLALAEERLTDLKAMLEDMRRDRDAWREQAQTRLLPVPAAPMSWWRWLRTTG
Ga0207675_1010387453	3300026118	Switchgrass Rhizosphere	YPLPTPVETRAELSSRLDLAEERLTELKAMLEDMRRDRDAWREQAQTRLLAAPAASAPWWRWLRRTA
Ga0209236_13044102	3300026298	Grasslands Soil	TAELRTRLALAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPATSMSWWRWLRTTG
Ga0208990_11764552	3300027663	Forest Soil	RTALQRLADLKAMLDEMRTERDAWRDQAQRLALPAPAPSITLWRWLRSTG
Ga0307301_102694171	3300028719	Soil	AMAQQRTAQAEERLSELKAMLEDMRSDRDAWRDQAQRLTLPSPQPSLSWWRWLRSTG
Ga0307297_101205581	3300028754	Soil	QAEERLSELKAMLEDMRSDRDAWRDQAQRLTLPSPQPSLSWWRWLRSTG
Ga0318516_106591521	3300031543	Soil	YPFPAPVETVAELRTRLALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0318541_101381361	3300031545	Soil	VETVAELRTRLAQAEERLSELKAMLEDIRRDRDAWRAQAQTRLLPAPAAAMSWWRWLRTT
Ga0318538_100078089	3300031546	Soil	FPAPVETMDELRTRLALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0318538_105868313	3300031546	Soil	ETVAELRTRLALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG
Ga0318528_103911372	3300031561	Soil	RVALAEERLTELKAVLEDIRRDRDAWREQAKTRLLPAPATTMSWWRWLRTTG
Ga0318528_106930952	3300031561	Soil	VETASELRTRLTLAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPTARMSWWPWRRTA
Ga0318515_100611964	3300031572	Soil	EERLTELKAVLEDIRRDRDAWREQAKTRLLPAPATTMSWWRWLRTTG
Ga0310915_102046814	3300031573	Soil	ASELRTRLTLAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPTARMSWWPWRRTAG
Ga0318555_105146772	3300031640	Soil	PAPVETVAELRTRLALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0318555_107763441	3300031640	Soil	VYPFPAPVETVAELRTRLALAEERLSDLKALLEDMRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTR
Ga0318542_104712173	3300031668	Soil	TPLETVAELRARLGLAEERLTDLKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG
Ga0318561_100025311	3300031679	Soil	RTRLALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTR
Ga0318561_101771601	3300031679	Soil	EERLSELKAMLEDMRRDRDAWREQAQTRLLPAPTARMSWWPWRRTAG
Ga0318561_106393081	3300031679	Soil	RTRLALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG
Ga0318574_100024301	3300031680	Soil	AEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTR
Ga0318574_107141302	3300031680	Soil	AEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0306917_103534313	3300031719	Soil	LRTRLALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0318500_103232502	3300031724	Soil	LRTRLTLAEERLSELKVMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWRRAAG
Ga0318500_104292382	3300031724	Soil	ARVYPFPAPVETVAELRTRLALAEERLSDLKALLEDMRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0318501_100669162	3300031736	Soil	VETTAELRTRLTLAEERLSELKVMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWRRTA
Ga0318509_103019702	3300031768	Soil	PFPAPVETPAELRTRLALAEERLTELKAMLEAMRRDRDAWREQAQTRLLPAPAAPTSWWRWLRTTGATG
Ga0318509_105522911	3300031768	Soil	PAPIETAAELRTRLTLAEERLSELKVMLEDIRRDRDAWREQAQTRLLPAPAARMSWWPWRRTAG
Ga0318498_101433652	3300031778	Soil	PFPAPVETVAELRTRVALAEERLTELKAVLEDIRRDRDAWREQAKTRLLPAPATTMSWWRWLRTTG
Ga0318547_105215111	3300031781	Soil	TAELRTRLTLAEERLSELKVMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWRRAAG
Ga0318548_100136563	3300031793	Soil	LTLAEERLSELKVMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWRRAAG
Ga0318503_103057221	3300031794	Soil	LRTRLAQAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0318550_103100321	3300031797	Soil	LTLAEERLSELKVMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWRRTAA
Ga0318497_103618472	3300031805	Soil	LALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTR
Ga0318497_106398282	3300031805	Soil	IETAAELRTRLTLAEERLSELKVMLEDIRRDRDAWREQAQTRLLPAPAARMSWWPWRRTA
Ga0318568_106118601	3300031819	Soil	EERLTDLKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWPWLRTTG
Ga0318511_101798813	3300031845	Soil	RLALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG
Ga0318544_101371181	3300031880	Soil	TRLALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG
Ga0306925_106291343	3300031890	Soil	RTRLALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0306925_111328392	3300031890	Soil	RTRLTLAEERLSELKAMLEDMRRDRDAWREQAQTRMLPAPAAPMSWWRWLRSTG
Ga0318520_100352561	3300031897	Soil	AEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG
Ga0318520_104933602	3300031897	Soil	VETVDELRTRLALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTT
Ga0306923_101820411	3300031910	Soil	ELKAMLEDIRRDRDAWRAQAQTRLLPAPAAAMSWWRWLRTTG
Ga0310912_105253551	3300031941	Soil	PVETVAELRTRLALAEQRLSDVKAMLEDMRRDRDAWREQAQTRLLPAPAVPLSWWRWLRTTG
Ga0310916_105581074	3300031942	Soil	LTMAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPAARMPLWPWRRTAG
Ga0310916_114995203	3300031942	Soil	VAELRARLGLAEERLTDLKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWPWLRTTG
Ga0310913_100852125	3300031945	Soil	RLTLAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPTARMSWWPWRRTAG
Ga0310913_103902383	3300031945	Soil	RLTVAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAARMPLWPWRRTAG
Ga0310913_106131511	3300031945	Soil	RTRLTLAEERLSELKVMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWRRTAA
Ga0310910_108664043	3300031946	Soil	LRTRLTMAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPAARMPLWPWRRTAG
Ga0306926_107486622	3300031954	Soil	APVETVAELRTRLALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0306926_115376792	3300031954	Soil	RLTMAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWRRTAG
Ga0306926_129232361	3300031954	Soil	RVALAEERLTELKATLEDMRRDRDAWREQAQTRLLPAPAVSWWRRLRRTG
Ga0318530_102422561	3300031959	Soil	AEERLSELKVMLEDMRRDRDAWREQAQTRLLPAPAARMSWWPWRRTAA
Ga0306922_105052084	3300032001	Soil	FPAPVESVAELRTRLALAEERLTELKTMLKDMQRDRDAWREQAQTRLLPAPAAPMSWWRWLRRTG
Ga0318507_100413101	3300032025	Soil	DELRTRLALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0310911_100105057	3300032035	Soil	ETVAELRTRLALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTR
Ga0318558_102107801	3300032044	Soil	LALAEERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG
Ga0318506_102298541	3300032052	Soil	PAPVETPAELRTRLALADERLTELKAMLEDMRRDRDAWREQAQTRLLPAPAATMSWWRWLRTTG
Ga0318575_101591381	3300032055	Soil	VYPFPAPVETVAELRTRLALAEERLSDLKALLEDMRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0318533_100152129	3300032059	Soil	TRLTLAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPTARMSWWPWRRTAG
Ga0318514_105240661	3300032066	Soil	VAELRARLGLAEERLTDLKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG
Ga0306924_124235602	3300032076	Soil	LAEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTAG
Ga0318540_103653851	3300032094	Soil	MVAELRTRLTLAEERLSELKAMLEDMRRDRDAWREQAQTRMLPAPAAPMTWWRWLRSTG
Ga0318540_106079692	3300032094	Soil	VDELRTRLALAEERLSELKAMLEDIRRDRDAWREQAQTRLLPAPAAAMSWWRWLRTTG
Ga0307471_1041866071	3300032180	Hardwood Forest Soil	TRVYPFPAPRETMAELRTRLALAEERLSELRAMLEDMRRDRDAWREQAQTRLLPAPAAPTSWWRWLRTTG
Ga0307471_1042601671	3300032180	Hardwood Forest Soil	NARTALQRLADLKAMLDEMRTERDAWRDQAQRLALPAPAPSITLWRWLRSTG
Ga0306920_1002985206	3300032261	Soil	AEERLSELKAMLEDMRRDRDAWREQAQTRLLPAPTARMSWWPWRRTAG
Ga0306920_1018139631	3300032261	Soil	RVYPFPTPLETVAELRARLGLAEERLTDLKAMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWPWLRTTG
Ga0306920_1037929871	3300032261	Soil	LRTRLALAEERLTELKAMLEAMRRDRDAWREQAQTRLLPAPAAPTSW
Ga0310914_108985472	3300033289	Soil	TRLALADERLTELKAMLEDMRRDRDAWREQAQTRLLPPPAAPMSWWQWLRTTG
Ga0310914_117312611	3300033289	Soil	VAELRTRLALAEERLTELEMMLEDIRRDRDAWREQAQMRLLPAPAAPMSWSRWLRTTGCGGAHAAL
Ga0318519_108208542	3300033290	Soil	TLAEERLSELKVMLEDIRRDRDAWREQAQTRLLPAPAARMSWWPWRRTAG
Ga0318519_110666812	3300033290	Soil	LHTRLTLAEERLTELKTMLEDMRRDRDAWREQAQTRLLPAPAAPMSWWRWLRTTG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040231

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences