Metagenome / Metatranscriptome Family F040273

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040273
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	67 residues
Representative Sequence	MPYTRPIRRFYLTPPAVPTFVISVLLAVLALLAVYGHLPQLHSIGGFTILLIAYVVLLLGTLLRGI
Number of Associated Samples	134
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.37 %
% of genes near scaffold ends (potentially truncated)	29.01 %
% of genes from short scaffolds (< 2000 bps)	82.72 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.605 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.580 % of family members)
Environment Ontology (ENVO)	Unclassified (25.926 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.877 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.94% β-sheet: 0.00% Coil/Unstructured: 51.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF03588	Leu_Phe_trans	3.70
PF13561	adh_short_C2	3.09
PF01965	DJ-1_PfpI	2.47
PF01841	Transglut_core	2.47
PF00188	CAP	1.85
PF13278	Obsolete Pfam Family	1.85
PF09923	DUF2155	1.85
PF03466	LysR_substrate	1.85
PF12695	Abhydrolase_5	1.23
PF13406	SLT_2	1.23
PF05071	NDUFA12	1.23
PF00015	MCPsignal	1.23
PF01476	LysM	1.23
PF00929	RNase_T	0.62
PF08843	AbiEii	0.62
PF02627	CMD	0.62
PF13426	PAS_9	0.62
PF05239	PRC	0.62
PF13462	Thioredoxin_4	0.62
PF11534	HTHP	0.62
PF02775	TPP_enzyme_C	0.62
PF02525	Flavodoxin_2	0.62
PF13483	Lactamase_B_3	0.62
PF01636	APH	0.62
PF02397	Bac_transf	0.62
PF13586	DDE_Tnp_1_2	0.62
PF01717	Meth_synt_2	0.62
PF00378	ECH_1	0.62
PF06035	Peptidase_C93	0.62
PF00563	EAL	0.62
PF13414	TPR_11	0.62
PF12860	PAS_7	0.62
PF05990	DUF900	0.62
PF13641	Glyco_tranf_2_3	0.62
PF13607	Succ_CoA_lig	0.62
PF01066	CDP-OH_P_transf	0.62
PF12681	Glyoxalase_2	0.62
PF09939	DUF2171	0.62
PF13340	DUF4096	0.62
PF12697	Abhydrolase_6	0.62
PF09351	DUF1993	0.62
PF01903	CbiX	0.62
PF13442	Cytochrome_CBB3	0.62
PF13437	HlyD_3	0.62
PF00575	S1	0.62
PF03061	4HBT	0.62
PF00326	Peptidase_S9	0.62
PF13365	Trypsin_2	0.62
PF07519	Tannase	0.62
PF04237	YjbR	0.62
PF03734	YkuD	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG2360	Leu/Phe-tRNA-protein transferase	Posttranslational modification, protein turnover, chaperones [O]	3.70
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	2.47
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	1.85
COG3761	NADH:ubiquinone oxidoreductase NDUFA12 subunit (Leigh syndrome)	Energy production and conversion [C]	1.23
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.62
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.62
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.62
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.62
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.62
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.62
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.62
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.62
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.62
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.62
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.62
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.62
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	0.62
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.62
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.62
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.60 %
Unclassified	root	N/A	28.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.60 %
Unclassified	root	N/A	28.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.60 %
Unclassified	root	N/A	28.40 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.88 %
Unclassified	root	N/A	28.40 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.23 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	49.38 %
Unclassified	root	N/A	28.40 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.23 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	42.59 %
Unclassified	root	N/A	28.40 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.62 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.62 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	30.86 %
Unclassified	root	N/A	28.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.85 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.23 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.62 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.62 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	27.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.85 %
Methyloferula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula	1.23 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
Azorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	0.62 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.62 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.40 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.32 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	3.09 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.09 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.85 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	1.23 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	0.62 %
Bradyrhizobium diversitatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diversitatis	0.62 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.62 %
Stenotrophomonas maltophilia group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group	0.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.40 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.32 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	3.09 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.85 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	1.23 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	1.23 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.62 %
Bradyrhizobium sp. JGI 0001002-A22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JGI 0001002-A22	0.62 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	0.62 %
Bradyrhizobium sp. CCGUVB1N3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	0.62 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	0.62 %
Bradyrhizobium diversitatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diversitatis	0.62 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459006\|GBPF9FW01D8SLE	Not Available	516	Open in IMG/M
3300001416\|JGI20176J14865_105043	Not Available	532	Open in IMG/M
3300001593\|JGI12635J15846_10009977	All Organisms → cellular organisms → Bacteria → Proteobacteria	8042	Open in IMG/M
3300001593\|JGI12635J15846_10097261	All Organisms → cellular organisms → Bacteria	2119	Open in IMG/M
3300002245\|JGIcombinedJ26739_100071472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3202	Open in IMG/M
3300002245\|JGIcombinedJ26739_100594853	Not Available	983	Open in IMG/M
3300002568\|C688J35102_120888935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2044	Open in IMG/M
3300003203\|JGI25406J46586_10013613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3485	Open in IMG/M
3300003369\|JGI24140J50213_10256359	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300003505\|JGIcombinedJ51221_10444310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JGI 0001002-A22	525	Open in IMG/M
3300004080\|Ga0062385_10154724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1189	Open in IMG/M
3300004080\|Ga0062385_10660190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	669	Open in IMG/M
3300004080\|Ga0062385_10796405	Not Available	618	Open in IMG/M
3300004080\|Ga0062385_11021016	Not Available	556	Open in IMG/M
3300004092\|Ga0062389_104274597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	537	Open in IMG/M
3300004114\|Ga0062593_102914288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	547	Open in IMG/M
3300004635\|Ga0062388_101397393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	703	Open in IMG/M
3300005332\|Ga0066388_100012226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	6849	Open in IMG/M
3300005332\|Ga0066388_101034181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1381	Open in IMG/M
3300005435\|Ga0070714_101509599	Not Available	656	Open in IMG/M
3300005439\|Ga0070711_100356012	All Organisms → cellular organisms → Bacteria → Proteobacteria	1178	Open in IMG/M
3300005529\|Ga0070741_10002283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	52486	Open in IMG/M
3300005531\|Ga0070738_10000532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	106196	Open in IMG/M
3300005591\|Ga0070761_10613155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300005614\|Ga0068856_100803681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	960	Open in IMG/M
3300005712\|Ga0070764_10268742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	976	Open in IMG/M
3300005712\|Ga0070764_10271221	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300005712\|Ga0070764_10481571	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300005921\|Ga0070766_10553355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	769	Open in IMG/M
3300005944\|Ga0066788_10032147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1198	Open in IMG/M
3300005985\|Ga0081539_10042056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2665	Open in IMG/M
3300005985\|Ga0081539_10223121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	856	Open in IMG/M
3300005994\|Ga0066789_10301051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300005995\|Ga0066790_10392641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	593	Open in IMG/M
3300006028\|Ga0070717_10004363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10208	Open in IMG/M
3300006046\|Ga0066652_100829005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	884	Open in IMG/M
3300006047\|Ga0075024_100334950	Not Available	752	Open in IMG/M
3300006048\|Ga0075363_100607126	Not Available	656	Open in IMG/M
3300006173\|Ga0070716_100680149	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300006173\|Ga0070716_101304964	Not Available	587	Open in IMG/M
3300006175\|Ga0070712_100260370	All Organisms → cellular organisms → Bacteria → Proteobacteria	1390	Open in IMG/M
3300006176\|Ga0070765_100345579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1382	Open in IMG/M
3300006176\|Ga0070765_102189064	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006354\|Ga0075021_10297924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	999	Open in IMG/M
3300006893\|Ga0073928_11072418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	546	Open in IMG/M
3300006953\|Ga0074063_13730689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300009553\|Ga0105249_10592117	Not Available	1163	Open in IMG/M
3300009635\|Ga0116117_1003602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4137	Open in IMG/M
3300010043\|Ga0126380_10439601	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300010046\|Ga0126384_11452397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	641	Open in IMG/M
3300010047\|Ga0126382_11904418	Not Available	563	Open in IMG/M
3300010154\|Ga0127503_10787041	Not Available	542	Open in IMG/M
3300010359\|Ga0126376_10456333	Not Available	1170	Open in IMG/M
3300010379\|Ga0136449_100134123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4921	Open in IMG/M
3300010396\|Ga0134126_11074608	All Organisms → cellular organisms → Bacteria → Proteobacteria	899	Open in IMG/M
3300010401\|Ga0134121_11045902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300012205\|Ga0137362_10335534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1309	Open in IMG/M
3300012212\|Ga0150985_111626895	Not Available	1434	Open in IMG/M
3300012212\|Ga0150985_119759620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300012469\|Ga0150984_111965272	Not Available	774	Open in IMG/M
3300012683\|Ga0137398_10851144	Not Available	637	Open in IMG/M
3300012924\|Ga0137413_10140033	Not Available	1567	Open in IMG/M
3300012957\|Ga0164303_11411176	Not Available	521	Open in IMG/M
3300014201\|Ga0181537_10146691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1617	Open in IMG/M
3300014657\|Ga0181522_10452589	Not Available	771	Open in IMG/M
3300014838\|Ga0182030_10703621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	947	Open in IMG/M
3300015206\|Ga0167644_1003699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	9076	Open in IMG/M
3300015206\|Ga0167644_1009028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5104	Open in IMG/M
3300015206\|Ga0167644_1168076	Not Available	516	Open in IMG/M
3300015264\|Ga0137403_11537241	Not Available	517	Open in IMG/M
3300017937\|Ga0187809_10374031	Not Available	538	Open in IMG/M
3300017947\|Ga0187785_10072360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1332	Open in IMG/M
3300017947\|Ga0187785_10302946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	735	Open in IMG/M
3300017974\|Ga0187777_10030559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3454	Open in IMG/M
3300017974\|Ga0187777_10782270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	681	Open in IMG/M
3300017975\|Ga0187782_10114401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1991	Open in IMG/M
3300018034\|Ga0187863_10149484	All Organisms → cellular organisms → Bacteria → Proteobacteria	1303	Open in IMG/M
3300020579\|Ga0210407_11023365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300020581\|Ga0210399_10440705	Not Available	1085	Open in IMG/M
3300020583\|Ga0210401_10288235	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300021170\|Ga0210400_10620175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	891	Open in IMG/M
3300021401\|Ga0210393_10040618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3651	Open in IMG/M
3300021401\|Ga0210393_10473227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1023	Open in IMG/M
3300021402\|Ga0210385_11362150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300021404\|Ga0210389_10914426	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300021405\|Ga0210387_10189807	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300021405\|Ga0210387_11428941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	594	Open in IMG/M
3300021407\|Ga0210383_11125781	Not Available	662	Open in IMG/M
3300021407\|Ga0210383_11573030	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300021444\|Ga0213878_10104043	Not Available	1154	Open in IMG/M
3300021478\|Ga0210402_10609060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1012	Open in IMG/M
3300021479\|Ga0210410_10136755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2180	Open in IMG/M
3300021479\|Ga0210410_11018046	Not Available	717	Open in IMG/M
3300021559\|Ga0210409_10425553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1186	Open in IMG/M
3300021560\|Ga0126371_11770705	Not Available	740	Open in IMG/M
3300022498\|Ga0242644_1045550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	507	Open in IMG/M
3300022512\|Ga0242676_1052595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	511	Open in IMG/M
3300022513\|Ga0242667_1021286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300025494\|Ga0207928_1029231	Not Available	1067	Open in IMG/M
3300025494\|Ga0207928_1032498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1010	Open in IMG/M
3300025915\|Ga0207693_10386482	All Organisms → cellular organisms → Bacteria → Proteobacteria	1094	Open in IMG/M
3300026291\|Ga0209890_10281525	Not Available	508	Open in IMG/M
3300026555\|Ga0179593_1087519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	2386	Open in IMG/M
3300027067\|Ga0208602_1000535	All Organisms → cellular organisms → Bacteria → Proteobacteria	3998	Open in IMG/M
3300027176\|Ga0208992_1002740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diversitatis	1922	Open in IMG/M
3300027439\|Ga0209332_1019634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1310	Open in IMG/M
3300027535\|Ga0209734_1103502	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300027574\|Ga0208982_1008713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2018	Open in IMG/M
3300027583\|Ga0209527_1029105	All Organisms → cellular organisms → Bacteria → Proteobacteria	1234	Open in IMG/M
3300027587\|Ga0209220_1018947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1837	Open in IMG/M
3300027660\|Ga0209736_1043194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1301	Open in IMG/M
3300027795\|Ga0209139_10081392	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1137	Open in IMG/M
3300027817\|Ga0209112_10089745	Not Available	983	Open in IMG/M
3300027826\|Ga0209060_10015332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4208	Open in IMG/M
3300027826\|Ga0209060_10314128	Not Available	715	Open in IMG/M
3300027853\|Ga0209274_10413595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	697	Open in IMG/M
3300027879\|Ga0209169_10490938	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300027908\|Ga0209006_10563638	Not Available	944	Open in IMG/M
3300027911\|Ga0209698_11105101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	587	Open in IMG/M
3300028813\|Ga0302157_10051024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2910	Open in IMG/M
3300028906\|Ga0308309_10319268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1318	Open in IMG/M
3300028906\|Ga0308309_10321823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1313	Open in IMG/M
3300029701\|Ga0222748_1061106	Not Available	667	Open in IMG/M
3300029908\|Ga0311341_10475121	Not Available	715	Open in IMG/M
3300029917\|Ga0311326_10473601	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300029945\|Ga0311330_10870763	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300030019\|Ga0311348_11477496	Not Available	505	Open in IMG/M
3300030520\|Ga0311372_10450682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1918	Open in IMG/M
3300030811\|Ga0265735_109435	Not Available	502	Open in IMG/M
3300030862\|Ga0265753_1100815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	584	Open in IMG/M
3300030878\|Ga0265770_1022323	Not Available	1011	Open in IMG/M
3300030907\|Ga0074013_11007848	Not Available	619	Open in IMG/M
3300030993\|Ga0308190_1147326	Not Available	557	Open in IMG/M
3300031057\|Ga0170834_110625649	Not Available	632	Open in IMG/M
3300031170\|Ga0307498_10153682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	766	Open in IMG/M
3300031231\|Ga0170824_123718720	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300031234\|Ga0302325_11242087	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300031235\|Ga0265330_10215668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	810	Open in IMG/M
3300031238\|Ga0265332_10184382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	869	Open in IMG/M
3300031247\|Ga0265340_10303476	Not Available	708	Open in IMG/M
3300031366\|Ga0307506_10005608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2467	Open in IMG/M
3300031507\|Ga0307509_10935764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	532	Open in IMG/M
3300031708\|Ga0310686_108615647	Not Available	686	Open in IMG/M
3300031708\|Ga0310686_118420436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	5106	Open in IMG/M
3300032059\|Ga0318533_10458801	Not Available	933	Open in IMG/M
3300032160\|Ga0311301_10345919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2331	Open in IMG/M
3300032174\|Ga0307470_10162019	All Organisms → cellular organisms → Bacteria → Proteobacteria	1383	Open in IMG/M
3300032174\|Ga0307470_10199625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	1277	Open in IMG/M
3300032180\|Ga0307471_103706297	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300032515\|Ga0348332_10030337	Not Available	513	Open in IMG/M
3300032515\|Ga0348332_12544301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300032515\|Ga0348332_13761267	Not Available	725	Open in IMG/M
3300032783\|Ga0335079_10075075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3845	Open in IMG/M
3300032805\|Ga0335078_11276115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	841	Open in IMG/M
3300032828\|Ga0335080_10594847	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300032828\|Ga0335080_10958079	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300032829\|Ga0335070_10121173	All Organisms → cellular organisms → Bacteria	2703	Open in IMG/M
3300032897\|Ga0335071_10418889	All Organisms → cellular organisms → Bacteria → Proteobacteria	1293	Open in IMG/M
3300032955\|Ga0335076_11148617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	660	Open in IMG/M
3300033405\|Ga0326727_10056126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	6041	Open in IMG/M
3300033546\|Ga0316213_1015305	Not Available	547	Open in IMG/M
3300034161\|Ga0370513_095540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.36%
Host-Associated	Host-Associated	8.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.86%
Aquatic	Environmental → Aquatic	10.49%
Plants	Host-Associated → Plants	8.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.07%
Freshwater	Environmental → Aquatic → Freshwater	8.02%
Peat	Environmental → Terrestrial → Peat	4.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.09%
Sediment	Environmental → Aquatic → Sediment	1.85%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.85%
Roots	Host-Associated → Plants → Roots	1.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.74%
Loam	Environmental → Terrestrial → Soil → Loam	22.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.47%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.23%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.62%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.02%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.32%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.09%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.23%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.23%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.62%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.62%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.62%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.26%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.09%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.09%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.47%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.47%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.47%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.47%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.23%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.23%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.23%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.23%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.23%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.62%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.62%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.62%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.62%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.62%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.62%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.62%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.62%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.62%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
3300001416	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027067	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF007 (SPAdes)	Environmental	Open in IMG/M
3300027176	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030811	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030907	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood TCEFB (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033546	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE2	Host-Associated	Open in IMG/M
3300034161	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_18	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
L01_08133030	2170459006	Grass Soil	MFSNGFNKRKFIMPYSRPISRFYLTAPRVPTFALSVILAILAVFISYGHVPQLHGISSFMVLLLAYVVLLVGTLLRGV
JGI20176J14865_1050431	3300001416	Arctic Peat Soil	MPYTRPMRRFYLTAPRVVTFAVSILLAILALLIAYGHVVPLHGINGFVILLIAYVVLVAGTLLRGV*
JGI12635J15846_100099776	3300001593	Forest Soil	MPYTRPIRRFYLTPPAIPTFVISVLLAVLALLAVYGHIPQLHSIGGFTLLLIAYVVLLLGTLLRGI*
JGI12635J15846_100972612	3300001593	Forest Soil	VFLEQSIGLETQMPYTRPIRRFYLTAPRVVTFVVSIVLAVLALLIVYGHVAQLHGINGFLILLIAYVVLLAGTLLRGV*
JGIcombinedJ26739_1000714724	3300002245	Forest Soil	MPYTRPIRRFYLTAPRVVTFVVSIVLAVLALLIVYGHVAQLHGINGFLILLIAYVVLLAGTLLRGV*
JGIcombinedJ26739_1005948531	3300002245	Forest Soil	RNSVMPFTRPVRRFYLTPPKVITFAVSVLLAILAVAAVYGHFAVFRGFNGFVILLIAYLVLVAGTLIRGL*
C688J35102_1208889351	3300002568	Soil	MPYTRPIRRFYLTPPALPTFVISVLLAIVALFAAYGHLALLHGVSAFTLLLIAYVVLLLGTMLRGV*
JGI25406J46586_100136133	3300003203	Tabebuia Heterophylla Rhizosphere	MPYTRPYRRFYLTPPAIPTFIISVLLAILAVLAVYGHFTLLRGVSAFAILLIAYVILLVGNLVRGV*
JGI24140J50213_102563591	3300003369	Arctic Peat Soil	RFYLTPPAVPTFAISVLLAVLAVLAVYGHISQLHSIGGFTLLLIAYLVLLVGTLFRGI*
JGIcombinedJ51221_104443101	3300003505	Forest Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVVALLAVYGHIPELHSIGGFTILLIAYVILLLGTLLRGV*
Ga0062385_101547242	3300004080	Bog Forest Soil	MPYTRPIRRFYLTPPTVPTFVISVLLAVLALFAVYGHIAQLHSIGGFTLLLIAYVVLLLGTLLRGI*
Ga0062385_106601901	3300004080	Bog Forest Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVVALLAVYGHFPQLHSIGGFTILVIAYAILLLGTLLRGI*
Ga0062385_107964052	3300004080	Bog Forest Soil	MPYTRPYRRFYLTPPAIPTFVISVLLAIVAVLAVYGHFTLLHGVSAFLLLLIAYVVLLLGNLLRGV*
Ga0062385_110210161	3300004080	Bog Forest Soil	MPYTRSYRRFYLTPPAVPTFVISVLLAVLAVLTASGHLPQLHSIGAFTILLIAYVILFLGNLLRGI*
Ga0062389_1042745971	3300004092	Bog Forest Soil	MPYTRPIRRFYLTPPAIPTFVISVLLAVLALLAVYGHFPQLHSIGGFTILLIAYAVLLLGTLLRGI*
Ga0062593_1029142882	3300004114	Soil	PIRRFYLTPPALPTFVISVLLAIVALFAAYGHLALLHGVSAFTLLLIAYMVLLLGTMLRGV*
Ga0062388_1013973932	3300004635	Bog Forest Soil	TRPYRRFYLTPPAIPTFVISVLLAIVAVLAVYGHFTLLHGVSAFLLLLIAYVVLLLGNLLRGV*
Ga0066388_1000122262	3300005332	Tropical Forest Soil	MPYTRPIRRFYLTPPTMMTFVISVVLAVIAVMATYGHLALLKGVSAFVVLLIAYLVLLAGTLLRGM*
Ga0066388_1010341813	3300005332	Tropical Forest Soil	MPYTRPIRRFYLTPPTMMTFVISVVFAVIAVMATYGHLALLKGVSSFVILLIAYLVLLAGTLLRGM*
Ga0070714_1015095991	3300005435	Agricultural Soil	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHLALLNGVSAFSILLIAYVVLLLGNLLRG
Ga0070711_1003560122	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHLALLNGVSAFSILLIAYVVLLLGNLLRGV*
Ga0070741_1000228348	3300005529	Surface Soil	MPYTRPYRRFYLTPPAIPTFVISVLLAIVAVLAVYGHLALLHGVSSFLILLIAYVVLLIGNLLRGV*
Ga0070738_1000053270	3300005531	Surface Soil	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHFTVLHGVSAFLILLIAYVVLLLGNLLRGV*
Ga0070761_106131552	3300005591	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLALLAVYGHLPQLHSIGGFTILLIAYIVLLLGTLLRGI*
Ga0068856_1008036812	3300005614	Corn Rhizosphere	MPYTRPIRRFYLTPPAFPTFVISVLLAVFALLAAYGHLALLHGVSAFTLLLIGY
Ga0070764_102687422	3300005712	Soil	MPYTRPIRRFYLTPPAVPTFIISALLAIVALLAAYGHLTVLHGVSAFTILLIGYVILLLGVMLRGV*
Ga0070764_102712212	3300005712	Soil	MPYTRPYRRFYLTPPAVPTFVISALLAVVALLAAYGHLTILHGVSAFTILLIAYVVLLIGNLLRGV*
Ga0070764_104815712	3300005712	Soil	CCGKHLMPYTRPIRRFYLTPPAVPTFVISVLLAVVALFAAYGHLTVLHGVSAFTIMLIAYVILLLGVMLRGV*
Ga0070766_105533551	3300005921	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLALLAVYGHLPQLHSIGGFTILLIAY
Ga0066788_100321471	3300005944	Soil	MFLQEEIKQEAPMPYTRPIRRFYLTPPAVPTFVISVLLAVLAVLAVYGHIPQLHSIGGFTLLLIAYLVLLVGTLFRGI*
Ga0081539_100420564	3300005985	Tabebuia Heterophylla Rhizosphere	MPYTRPYRRFYLTPPAVPTFIISVLLAIVAVLAVYGHFTLLRGVSAFAILLVAYVILLLGNLLRGV*
Ga0081539_102231211	3300005985	Tabebuia Heterophylla Rhizosphere	MPYTRPYRRFYLTPPAVPTFIISVLLAILAVLAVYGHFTLLRGVSAFAILLIAYIILLVGNLVRGV*
Ga0066789_103010512	3300005994	Soil	MPYTRPMRRFYLTAPKVVTFAVSIVLAILALLIVYGNLVQLHGVSGFSILLIAYVVMLAGILLRGV*
Ga0066790_103926412	3300005995	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLAVLAVYGHIPQLHSIGGFTLLLIAYLVLLVGTLFRGI*
Ga0070717_1000436310	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPYTRPFRRFYLTPPAVPTFVISVLLAVLALLAVYGHIPELHSIGGFTILLIAYVILLLGTLLRGI*
Ga0066652_1008290052	3300006046	Soil	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHFTLLKGVSAFAILLIAYVVLLLGNLLRGV*
Ga0075024_1003349503	3300006047	Watersheds	MPYTRPIRRFYLTPPAVPTFVVSVLLAVLALLAVYGHFPQLHSIGGFTILLIAYAVLLFGTLFRGV*
Ga0075363_1006071262	3300006048	Populus Endosphere	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHLTLLNGVSAFSILLIAYVVLLLGNLLRGV*
Ga0070716_1006801492	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPYTRPYRRFYLTPPAIPTFVISVLLAIVAVLAVYGHFTLLRGVSAFSILLIAFVILLLGNLLRGI*
Ga0070716_1013049642	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TAPRVPTFAISIVLALLAVFTIYGHVPQLHGINGFVMLLVAYLVLLAGTLLRGV*
Ga0070712_1002603703	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	YTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHLALLNGVSAFSILLIAYVVLLLGNLLRGV*
Ga0070765_1003455792	3300006176	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLALLAVYGHLPQLHSVGGFTLLLIAYVVLLLGTLLRGI*
Ga0070765_1021890641	3300006176	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVVALFAAYGHLTVLHGVSAFTIMLIAYVILLLGVMLRGV*
Ga0075021_102979241	3300006354	Watersheds	MPYTRPIRRFYLTPPAVPTFVISVLLAVLAVLAVYGHIPQLHGIGGFTLLLIAYVVLVLGTLVRGI*
Ga0073928_110724181	3300006893	Iron-Sulfur Acid Spring	MPYTRPIRRFYLTPPAVPTFVISVLLAIVALLAVYGHIPELHSIGGFTILLIAYVILLLGTLLRGV*
Ga0074063_137306891	3300006953	Soil	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHFALLRGVSAFAILLIAYVILLLGNLLRGV*
Ga0105249_105921173	3300009553	Switchgrass Rhizosphere	MPYTRPYRRFYLTPPAIPTFVISVLLAIVAVLAVYGHFTLLRGVSAFAILLIAYVVLLLGNLLRGV*
Ga0116117_10036024	3300009635	Peatland	MPYTRPIRRFYLTAPRTLTFAVSLLLALLALLIAYGHVVDLHGVSAFVVLLIAYAVLLAGTLLRGV*
Ga0126380_104396011	3300010043	Tropical Forest Soil	MPYTRPYRRFYLTPPAIPTFVISVLLAIVAVLAVYGHFTLLHGVSAFLILLIAFVVLLLGNLLRGI*
Ga0126384_114523972	3300010046	Tropical Forest Soil	RRFYLTPPTMMTFVISVVLAVIAVMATYGHLALLKGVSAFVVLLIAYLVLLAGTLLRGM*
Ga0126382_119044181	3300010047	Tropical Forest Soil	MPYTRPIRRFYPTPPTMMTFVISVVLAVIAVMATYGHLALLKGVSAFVVLLIAYLVLLAGTLLRGM*
Ga0127503_107870412	3300010154	Soil	GKSPMPYTRPIRRFYLTPPAVPTFVISVLLAVLALLAVYGHIAQLHSIGGFTLLLIAYVVLLLGTLLRGI*
Ga0126376_104563332	3300010359	Tropical Forest Soil	MPYTRPIRRFYLTPPTMMTFVISVVLAVIAIMATYGHLALLKGVSSFVILLIAYLVLLAGTLLRGM*
Ga0136449_1001341235	3300010379	Peatlands Soil	MFSQQEVEKESVMPYTRPIRRFYLTPPAVPTFVISVLLAVVALLAVYGHIPELHSIGGFTILLIAYVILLAGTLLRGI*
Ga0134126_110746082	3300010396	Terrestrial Soil	MPYTRPIRRFYLTPPAVPTFVISALLAIVALLAAYGHLTVLHGVSAFTLMLIAYVILLFGVMLRGV*
Ga0134121_110459021	3300010401	Terrestrial Soil	MPYTRPYRRFYLTPPAIPTFVISVLLAIVAVLAVYGHFTLLRGVSAFAILLIAYVVLLLGNLLR
Ga0137362_103355342	3300012205	Vadose Zone Soil	MPYTRPIRRFYLTPPAVPTFIISALLAVVALLAAYGHIPQLHSIGSFTLLLIAYVVLLAGTLLRGV*
Ga0150985_1116268951	3300012212	Avena Fatua Rhizosphere	MPYSRPISRFYLTAPRVPTLVLSLVLAILAVLIAYGHVAQLHGISSFVVLLVAYVILLLGALLRGV*
Ga0150985_1197596201	3300012212	Avena Fatua Rhizosphere	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHFALLRGVSSFAILLIAYVVLLLGNLLRGV*
Ga0150984_1119652722	3300012469	Avena Fatua Rhizosphere	MPYSRPISRFYLTAPKVPTFVLSVVLAILAVFIAYGHVSQLHGINSFMVLLLAYVVLVAGTLLRGV*
Ga0137398_108511441	3300012683	Vadose Zone Soil	MPYTRPIRRFYLTPPAVPTFAISVVLAVVALLAVYGHFPQLHSIGGFTILLIAYVILLAGTLLRGV*
Ga0137413_101400332	3300012924	Vadose Zone Soil	MPYTRPIRRFYLTPPAVPTFAISVVLAAVALLAVYGHFPQLHSIGGFTILLIAYVILLAGTLLRGV*
Ga0164303_114111761	3300012957	Soil	MPYTRPIRRFYLTPPALPTFVISVLLAIVALFAAYGHLALLHGVSAFTLLLIAYMVLLLGTMLRGV*
Ga0181537_101466912	3300014201	Bog	MPYTRPIRRFYLTPPAVPTFVISVLLAVLALLAVYGHLPQLHSIGGFTILLIAYVILLLGTLLRGI*
Ga0181522_104525892	3300014657	Bog	MPYTRPIRRFYLTPPAVPTFVISVLLAVLALFAVYGHLPQLHSIGGFTILLIAYVILLLGTLLRGI*
Ga0182030_107036212	3300014838	Bog	MPYTRPIRRFYLTPPTFATFVISVLLALLAVLATYGHLVVFRGINSFVILLIAYLVLLAGALFRGI*
Ga0167644_10036999	3300015206	Glacier Forefield Soil	MPYTRPYRRFYLTPPAVPTFVISALLAVVALFAAYGHLTVLHGVSAFTILLIAYVVLLIGNLLRGV*
Ga0167644_10090281	3300015206	Glacier Forefield Soil	GKHLMPYTRPIRRFYLTPPAVPTFVISVLLAVVALFAAYGHLTILHGVSAFTIMLIAYVILLLGVMLRGV*
Ga0167644_11680761	3300015206	Glacier Forefield Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAIVALLAAYGHLALLHGVSAFTLMLIAYVILLLGTMLRGV*
Ga0137403_115372411	3300015264	Vadose Zone Soil	MFSLEYIDTEKSLMPYTRPIRRFYLTPPAVPTFVISVLLAVLALLAVYGHLPQLHSIGGFTILLIAYVILLAGTLFRGV*
Ga0187809_103740311	3300017937	Freshwater Sediment	YRRFYLTPPAIPTFVISVLLAIVAVLAVYGHLALLHGVSSFLILLIAYVVLLIGNLLRGV
Ga0187785_100723602	3300017947	Tropical Peatland	MPYTRPYRRFYLTPPALPTFIISVLLAIVAVLAVYGHLTLLHGVSAFSILLIAYVVLLIGNLVRGV
Ga0187785_103029462	3300017947	Tropical Peatland	MPYTRPYRRFYLTPPAIPTFVISLLLAVVAVLAVYGHFTLLHGVSAFLILLIAYVVLLLGNLLRGV
Ga0187777_100305596	3300017974	Tropical Peatland	MPYTRPYRRFYLTPPAIPTFVISLLLAIVAILAVYGHVALLHGVSASLILLIAYAVLLSGNLLRGV
Ga0187777_107822702	3300017974	Tropical Peatland	MPYTRPYRRFYLTPPTIPTFVISVLLAIVAVLAVYGHLTLLHGVSAFLILLIAYVVLLLGNLLRGI
Ga0187782_101144012	3300017975	Tropical Peatland	MPYTRPYRRFYLTPPTIPTFVISVLLAIVAALAVYGHLTLLHGVSAFLILLIAYVVLLLGNLLRGI
Ga0187863_101494841	3300018034	Peatland	MPYTRPIRRFYLTAPRTLTFAVSLLLALLALLIAYGHVVDLHGVSAFVVLLIAYAVLLAGTLLRGV
Ga0210407_110233651	3300020579	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLAVLAVYGHIPQLHSVGGFTLLLIAY
Ga0210399_104407052	3300020581	Soil	MPYTRPIRRFYLTPPALPTFVISVLLAVLALLAVYGHIPQLHSIGGFTLLLIAYVVLLLGTLLRGI
Ga0210401_102882351	3300020583	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLAVLAVYGHIPQLHGIGGFTLLLIAYVVLVLGTLVRGI
Ga0210400_106201751	3300021170	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLAVLAVYGHIPQLHSIGGFTLLLIAYVVLLFGTLLRGI
Ga0210393_100406187	3300021401	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVVALLAVYGHIPELHSIGGFTILLIAYVILLLGTLLRGV
Ga0210393_104732272	3300021401	Soil	MPYSRPISRFYLTAPRVPTFVLSIVLAVLALLTAYGHLPLLHGVSSFVVLLLAYVVLLVGTLLRGV
Ga0210385_113621501	3300021402	Soil	FYLTPPAVPTFVISVLLAVLALLAVYGHLPQLHSIGGFTILLIAYIVLLLGTLLRGI
Ga0210389_109144261	3300021404	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAIVALFAAYGHLALLHGVSAFTLLLIGYVVLLL
Ga0210387_101898071	3300021405	Soil	YLTPPALPTFIISVLLAVLALLAVYGHIPQLHSIGGFTLLLIAYVVLLLGTLLRGI
Ga0210387_114289411	3300021405	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVVALFAAYGHLTVLHGVSAFTIMLIAYVILLLGVMLRGV
Ga0210383_111257811	3300021407	Soil	MPYSRPISRFYLTAPRVPTFVLSIVLAVLALLTAYGHLPLLHGVSSFVVLLLAYDVLLVGTLLRGV
Ga0210383_115730302	3300021407	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLAVLAVYGHIPQLHSIGGFTLLLIAYVVLLLGTLLRGV
Ga0213878_101040433	3300021444	Bulk Soil	MPYTRPYRRFYLTPPAIPTFVISVLLAIVAVLAVYGHIALLRGVSSSLILLIAYIVLLVGNLLRGV
Ga0210402_106090602	3300021478	Soil	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHLTLLNGVSAFSILLIAYVVLLLGNLLRGV
Ga0210410_101367553	3300021479	Soil	MPYTRPIRRFYLTPPAVPTFIISALLAVVALLAAYGHIPQLHSIGSFTLLLIAYVVLLAGTLLRGV
Ga0210410_110180461	3300021479	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLAVLAVYGHLPQLHSIGGFALLLIAYVVLLLGTLLRGI
Ga0210409_104255532	3300021559	Soil	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHLTLLNGVSAFSILLVAYVVLLLGNLLRGV
Ga0126371_117707051	3300021560	Tropical Forest Soil	VRHSEAAIPVPYTRPYRRFYLTPPAIPTFVISVLLAIVAVLAVYGHFTLLHGVSAFLILLIAFVILLLGNLLRGI
Ga0242644_10455502	3300022498	Soil	KHLMPYTRPIRRFYLTPPAVPTFIISVLLAVVALLAAYGHLTVLHGVSAFTILLIGYVILLLGVMLRGV
Ga0242676_10525952	3300022512	Soil	GKHLMPYTRPIRRFYLTPPAVPTFVISVLLAVVALFAAYGHLTILQGVSAFTIMLIAYVILLLGVMLRGV
Ga0242667_10212861	3300022513	Soil	YLTPPAVPTFVISVLLAIVALLAAYGHLTVLHGVSAFTLMLIAYVILLLGVMLRGV
Ga0207928_10292312	3300025494	Arctic Peat Soil	MPYTRPMRRFYLTAPRVVTFAVSILLAILALLIAYGHVVPLHGINGFVILLIAYVVLVAGTLLRGV
Ga0207928_10324981	3300025494	Arctic Peat Soil	VPYTRPMRRFYLTPPRVATFAISVVLAIVALLIAYGHVVQLHGVNGFVILLIAYAVLVAGILLRGV
Ga0207693_103864822	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	YLTPPAVPTFVISVLLAIVAVLAVYGHLALLNGVSAFSILLIAYVVLLLGNLLRGV
Ga0209890_102815251	3300026291	Soil	MPYTRPIRRFYLTPPAIPTFVVSVLLAVLALLAVYGHIAQLHSIGGFTILLIAYVILLLGTLLRGV
Ga0179593_10875191	3300026555	Vadose Zone Soil	HGNPIMPYSRAISRFYLTAPRVPTVCHFDRAGVVGCFAAYGHIPQLHGISSFVVLLIAYVVLLIGTLLRGSDLSGMEPTK
Ga0208602_10005355	3300027067	Forest Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLALLAVYGHLPQLHSIGGFTILLIAYVILLLGTLLRGI
Ga0208992_10027403	3300027176	Forest Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVVALFAAYGHLTILHGVSAFTIMLIAYVILLLGVMLRGV
Ga0209332_10196341	3300027439	Forest Soil	MPYTRPIRRFYLTPPAIPTFVISVLLAVLALLAVYGHIPQLHSIGGFTLLLIAYVVLLLGTLLRGI
Ga0209734_11035021	3300027535	Forest Soil	VFLEQSIGLETQMPYTRPIRRFYLTAPRVVTFVVSIVLAVLALLIVYGHVAQLHGINGFLILLIAYVVLLAGTLLRGV
Ga0208982_10087132	3300027574	Forest Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVVALFAAYGHLTVLHGISAFTIMLIAYVILVLGVMLRGV
Ga0209527_10291052	3300027583	Forest Soil	MPYTRPIRRFYLTAPRVVTFVVSIVLAVLALLIVYGHVAQLHGINGFLILLIAYVVLLAGTLLRGV
Ga0209220_10189472	3300027587	Forest Soil	LGQVFLEQSIGLETQMPYTRPIRRFYLTAPRVVTFVVSIVLAVLALLIVYGHVAQLHGINGFLILLIAYVVLLAGTLLRGV
Ga0209736_10431943	3300027660	Forest Soil	NRASAMPYTRPIRRFYLTPPAIPTFVISVLLAVLALLAVYGHIPQLHSIGGFTLLLIAYVVLLLGTLLRGI
Ga0209139_100813924	3300027795	Bog Forest Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLAVFAVYGHIPQLHSIGGFTLLLIA
Ga0209112_100897451	3300027817	Forest Soil	MPYTRPIRRFYLTPPAVPTFIISVLLAIVAVLAVYGNVPQLHSIGGFAFLLIAYVILLAGTLLRGV
Ga0209060_100153323	3300027826	Surface Soil	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHFTVLHGVSAFLILLIAYVVLLLGNLLRGV
Ga0209060_103141281	3300027826	Surface Soil	MPYTRPYRRFYLTPPAIPTFVISVLLAIVAVLAVYGHLALLHGVSSFLILLIAYVVLLIGNLLRGV
Ga0209274_104135952	3300027853	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLALLAVYGHLPQLHSIGGFTILLIAYIVLLLGTLLRGI
Ga0209169_104909382	3300027879	Soil	MPYTRPIRRFYLTPPAVPTFIISALLAIVALLAAYGHLTVLHGVSAFTILLIGYVILLLGVM
Ga0209006_105636382	3300027908	Forest Soil	MPYTRPYRRFYLTPPAVPTFVISALLAVVALLAAYGHLTILHGVSAFTILLIAYVVLLIGNLLRGV
Ga0209698_111051012	3300027911	Watersheds	MPYTRPIRRFYLTPPAIPTFVVSVLLAVLALLAVYGHFPQLHSIGGFTILLIAYAVLLFGTLFRGV
Ga0302157_100510243	3300028813	Bog	MPYTRPIRRFYLTAPRFATFAISIVLAILALLIAYGHLVELHGINGFVVLLIAYAVLLAGTLLRGV
Ga0308309_103192682	3300028906	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLALLAVYGHLPQLHSVGGFTLLLIAYVVLLLGTLLRGI
Ga0308309_103218231	3300028906	Soil	GGGTREGKSRTPYTRPIRRFYLTPPAVPTFVISVLLAVVALLAVYGHIPELHSIGGFTILLIAYVILLLGTLLRGV
Ga0222748_10611061	3300029701	Soil	NWEPAMPYTRPIRRFYLTPPAVPTFVISVLLAVLAVLAVYGHIPQLHGIGGFTLLLIAYVVLVLGTLVRGI
Ga0311341_104751211	3300029908	Bog	GMPYTRPIRRFYLTAPRFATFAISIVLAILALLIAYGHLVELHGINGFVVLLIAYAVLLAGTLLRGV
Ga0311326_104736012	3300029917	Bog	ESGMPYTRPIRRFYLTAPRFATFAISIVLAILALLIAYGHLVELHGINGFVVLLIAYAVLLAGTLLRGV
Ga0311330_108707631	3300029945	Bog	RESGMPYTRPIRRFYLTAPRFATFAISIVLAILALLIAYGHLVELHGINGFVVLLIAYAVLLAGTLLRGV
Ga0311348_114774962	3300030019	Fen	MPHTRPHRRFYLTPPAVPTFVISVLLAIVAVLAVYGHFTLLRGVSSFAILLIAYVVLLLGNLLRGV
Ga0311372_104506822	3300030520	Palsa	MPYTRPIRRFYLTSPAVPTFVISVLLAVLALFAVYGHLPQLHSIGGFTILLIAYVILLLGTLLRGI
Ga0265735_1094351	3300030811	Soil	IRRFYLTPPAVPTFIISVLLAIVAVLAVYGNVPALHGIGGFAFLLIAYVILMAGTLLRGV
Ga0265753_11008151	3300030862	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVVALLAVYGHIPELHSIGGFTILLIAYVILLLG
Ga0265770_10223231	3300030878	Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLALLAVYGHLPQLHSIGGFTILLIAYVVLLLGTLLRGI
Ga0074013_110078482	3300030907	Soil	MPYTRPIRRFYLTAPRVVTFFISVLLAVLAVLTVYGHVGLLHELNGFIVLLIAYLVLVAGVLLRGV
Ga0308190_11473261	3300030993	Soil	MPYSRPISRFYLTAPRVPTLVLSLVLATLAVLIAYGHVAQLHGISSFVVLLVAYVILLLGALLRGV
Ga0170834_1106256493	3300031057	Forest Soil	MPYTRPIKRFYLTPPAVPTFVISVLLAVLAVLAVYGHIPQLHSVGGFTLLLIAYVVLLLGTLLRG
Ga0307498_101536821	3300031170	Soil	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHFALLRGVSAFAILLIAYVILLLGNLLRGV
Ga0170824_1237187201	3300031231	Forest Soil	MPWNKPRQGMFSQQSIGREVFMPYSRPISRFYLTAPRVPTFVLSIVLALLALLTAYGHVAQLHGISGFVVLLLAYVVLLVGTLLRGI
Ga0302325_112420871	3300031234	Palsa	MPYTRPIRRLYLTPPAVPTFVISVLLAVLALFAVYGHLPQLHSIGGFTILLIAYVILLLGTLLRGI
Ga0265330_102156681	3300031235	Rhizosphere	MPYTRPIRRFYLTPPAVPTFIISALLAVVAVLAAYGHIPQLHNIGSFTVLLIAYVILLAGTLLRGV
Ga0265332_101843821	3300031238	Rhizosphere	GNLPMPYTRPIRRFYLTPPAVPTFIISALLAVVAVLAAYGHIPQLHNIGSFTVLLIAYVILLAGTLLRGV
Ga0265340_103034761	3300031247	Rhizosphere	MFSKEEIRREPPMPYTRPIRRFYLTPPAVPTFIISALLAVVALLAAYGHIPQLHSIGSFTLLLIAYVVLLAGTLLRGV
Ga0307506_100056082	3300031366	Soil	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHFTLLKGVSAFAILLIAYVVLLLGNLLRGV
Ga0307509_109357641	3300031507	Ectomycorrhiza	AADVSRAVHHNGNSLMPYTRPIRRFYLTAPKVVTFAVSAVLALLALLAVYGHFPQFHGINGFLVLLIAYLVLLAGTLLRGV
Ga0310686_1086156471	3300031708	Soil	RRFYLTPPAVPTFVISALLAVVALLAAYGHLTILHGVSAFTILLIAYVFLLIGNLLRGV
Ga0310686_1184204361	3300031708	Soil	MPYTRPYRRFYLTPPAVPTFVISALLAVVALLAAYGHLTVLHGVSAFTILLIAYVVLLIGNLLRGV
Ga0318533_104588012	3300032059	Soil	MPYTRPYRRFYLTPPAYPTFVISVLLAIVAVLAVYGHVTLLNGVSAFLILLIAVSHPVALRRGNR
Ga0311301_103459194	3300032160	Peatlands Soil	MFSQQEVEKESVMPYTRPIRRFYLTPPAVPTFVISVLLAVVALLAVYGHIPELHSIGGFTILLIAYVILLAGTLLRGI
Ga0307470_101620192	3300032174	Hardwood Forest Soil	MPYTRPIRRFYLTPPAVPTFVISVLLAVLALLAVYGHIPQLHSVGGFTILLIAYLVLLAGTLLRGI
Ga0307470_101996251	3300032174	Hardwood Forest Soil	MPYTRPYRRFYLTPPAVPTFVISVLLAIVAVLAVYGHLTLLNGVSAFSILLIAYVVLLLGNLLRRV
Ga0307471_1037062971	3300032180	Hardwood Forest Soil	ESAMPYTRPFRRFYLTPPAVPTFVISVLLAVLALLAVYGHIPQLHSVGGFTILLIAYLVLLAGTLLRGI
Ga0348332_100303372	3300032515	Plant Litter	KHLMPYTRPIRRFYLTPPAVPTFVISVLLAIVALLAAYGHLAQLHSIGGFAFLLIAYVVLLAGTLLRGV
Ga0348332_125443012	3300032515	Plant Litter	ATCPWPWNKPRQQMFSQQELEKESLMPYTRPIRRFYLTPPAVPTFVISVLLAVVALLAVYGHIPELHSIGGFTILLIAYVILLLGTLLRGV
Ga0348332_137612671	3300032515	Plant Litter	SCHMPYTRPYRRFYLTPPAVPTFVISALLAVVALLAAYGHLTILHGVSALTILLIAYVVLLIGNLLRGV
Ga0335079_100750755	3300032783	Soil	MPYTRPYRRFYLTPPAIPTFVISLLLAIVAVLAVYGHFTLLHGVSAFLILLIAYAVLLLGNLLRGV
Ga0335078_112761151	3300032805	Soil	QEWFYPMPYTRPYRRFYLTPPAIRTFVISVLLAVVAVLAVYGHFTLLHGVSAFLILLIGYVVLLLGNLMRGI
Ga0335080_105948472	3300032828	Soil	MPYTRPYRRFYLTPPAIRTFVISVLLAVVAVLAVYGHFTLLHGVSAFLILLIGYVVLLLGNLMRGI
Ga0335080_109580792	3300032828	Soil	MPYTRPYRRFYLTPPAIPTFVISVLLAIVAVLAVYGHFTLLHGVSAFLILLIGYVVLVLGNLMRGI
Ga0335070_101211733	3300032829	Soil	MPYTRPYRRFYLTPPAIPTFVISVLLAVVAVLAVYGHFALLHGVSAFLILLIAYVVLLLGNLLRGV
Ga0335071_104188892	3300032897	Soil	MPYTRPYRRFYLTPPALPTFIISVLLAIVAVLAAYGHLTLLHGVSAFSILLIAYVVLLIGNLVRGV
Ga0335076_111486172	3300032955	Soil	MPGTNRRPPRSLSRHSDAAVLMPYTRPYRRFYLTPPAIPTFVISLLLAVVAVLAVYGHFTLLHGVSAFLILLIAYVVLLLGNLLRGV
Ga0326727_100561263	3300033405	Peat Soil	MPYTRPYRRFYLTPPAVPTFVISVLLAVVAVLAAYGHLSLLRGVSAFTFLIIAYVVLLIGNLLRGV
Ga0316213_10153051	3300033546	Roots	MPYTRPIRRFYLTPPAVPTFVISVLLAVVALLAVYGHIPELHSIGGFTILLIAYVILLL
Ga0370513_095540_346_552	3300034161	Untreated Peat Soil	MSMPYTRPIRRFYLTAPRTLTFAVSLLLALLALLIAYGHVVDLHGVSAFVVLLIAYAVLMAGTLLRGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040273

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences