Metagenome Family F040317

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040317
Family Type	Metagenome
Number of Sequences	162
Average Sequence Length	49 residues
Representative Sequence	LLVGRLSGAKGVLAKSALSNMKIVADANELQIRTSVAQAEVGPLLGN
Number of Associated Samples	130
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.62 %
% of genes near scaffold ends (potentially truncated)	98.77 %
% of genes from short scaffolds (< 2000 bps)	92.59 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.975 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (9.259 % of family members)
Environment Ontology (ENVO)	Unclassified (51.852 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.370 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.33% β-sheet: 0.00% Coil/Unstructured: 46.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF13145	Rotamase_2	29.01
PF13624	SurA_N_3	4.94
PF00639	Rotamase	3.09
PF03741	TerC	2.47
PF13565	HTH_32	0.62
PF14371	DUF4412	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG0760	Peptidyl-prolyl isomerase, parvulin family	Posttranslational modification, protein turnover, chaperones [O]	3.09
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	2.47

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.98 %
Unclassified	root	N/A	8.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.98 %
Unclassified	root	N/A	8.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.98 %
Unclassified	root	N/A	8.02 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	90.74 %
Unclassified	root	N/A	8.02 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	45.68 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	8.02 %
Unclassified	root	N/A	8.02 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.68 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	8.02 %
Unclassified	root	N/A	8.02 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.68 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	8.02 %
Unclassified	root	N/A	8.02 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.68 %
Unclassified	root	N/A	8.02 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	6.17 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	1.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.68 %
Unclassified	root	N/A	8.02 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	6.17 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0876529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300000955\|JGI1027J12803_106344536	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300000956\|JGI10216J12902_118394974	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300003319\|soilL2_10028699	All Organisms → cellular organisms → Bacteria → Acidobacteria	2253	Open in IMG/M
3300003320\|rootH2_10326375	All Organisms → cellular organisms → Bacteria → Acidobacteria	1156	Open in IMG/M
3300004157\|Ga0062590_101728617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300004157\|Ga0062590_102877364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300004479\|Ga0062595_101215176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300004479\|Ga0062595_101885685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300004480\|Ga0062592_100532923	All Organisms → cellular organisms → Bacteria → Acidobacteria	979	Open in IMG/M
3300005289\|Ga0065704_10557488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300005290\|Ga0065712_10704807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300005293\|Ga0065715_10892784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300005295\|Ga0065707_10395411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	833	Open in IMG/M
3300005331\|Ga0070670_100331151	All Organisms → cellular organisms → Bacteria → Acidobacteria	1335	Open in IMG/M
3300005331\|Ga0070670_100464657	All Organisms → cellular organisms → Bacteria → Acidobacteria	1123	Open in IMG/M
3300005334\|Ga0068869_100752191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300005344\|Ga0070661_101182269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300005345\|Ga0070692_10046499	Not Available	2243	Open in IMG/M
3300005365\|Ga0070688_100325362	All Organisms → cellular organisms → Bacteria → Acidobacteria	1118	Open in IMG/M
3300005444\|Ga0070694_100641810	All Organisms → cellular organisms → Bacteria → Acidobacteria	859	Open in IMG/M
3300005444\|Ga0070694_101259608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300005459\|Ga0068867_100740888	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	871	Open in IMG/M
3300005468\|Ga0070707_101766615	Not Available	586	Open in IMG/M
3300005536\|Ga0070697_100608249	All Organisms → cellular organisms → Bacteria → Acidobacteria	961	Open in IMG/M
3300005539\|Ga0068853_101787580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300005544\|Ga0070686_101772576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005545\|Ga0070695_100266450	All Organisms → cellular organisms → Bacteria → Acidobacteria	1253	Open in IMG/M
3300005546\|Ga0070696_100359728	All Organisms → cellular organisms → Bacteria → Acidobacteria	1129	Open in IMG/M
3300005549\|Ga0070704_100482560	All Organisms → cellular organisms → Bacteria → Acidobacteria	1073	Open in IMG/M
3300005564\|Ga0070664_100081957	All Organisms → cellular organisms → Bacteria	2781	Open in IMG/M
3300005577\|Ga0068857_101221300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300005578\|Ga0068854_100792309	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300005614\|Ga0068856_101319551	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300005615\|Ga0070702_100158769	All Organisms → cellular organisms → Bacteria → Acidobacteria	1459	Open in IMG/M
3300005616\|Ga0068852_101795337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300005617\|Ga0068859_100110748	All Organisms → cellular organisms → Bacteria	2807	Open in IMG/M
3300005617\|Ga0068859_100645655	All Organisms → cellular organisms → Bacteria → Acidobacteria	1150	Open in IMG/M
3300005617\|Ga0068859_102478241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300005618\|Ga0068864_100245733	All Organisms → cellular organisms → Bacteria → Acidobacteria	1659	Open in IMG/M
3300005618\|Ga0068864_101491421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300005841\|Ga0068863_100366593	All Organisms → cellular organisms → Bacteria → Acidobacteria	1405	Open in IMG/M
3300005841\|Ga0068863_101645893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300005842\|Ga0068858_101178630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300005843\|Ga0068860_102213698	Not Available	571	Open in IMG/M
3300005843\|Ga0068860_102275701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300005844\|Ga0068862_102440214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300006169\|Ga0082029_1204322	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	905	Open in IMG/M
3300006196\|Ga0075422_10024885	Not Available	2053	Open in IMG/M
3300006358\|Ga0068871_100600700	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300006755\|Ga0079222_10537885	All Organisms → cellular organisms → Bacteria → Acidobacteria	870	Open in IMG/M
3300006804\|Ga0079221_10255612	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300006806\|Ga0079220_11265470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300006844\|Ga0075428_100179168	Not Available	2294	Open in IMG/M
3300006844\|Ga0075428_102336923	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300006844\|Ga0075428_102361595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300006845\|Ga0075421_100955895	All Organisms → cellular organisms → Bacteria → Acidobacteria	973	Open in IMG/M
3300006847\|Ga0075431_100799287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	917	Open in IMG/M
3300006880\|Ga0075429_100825908	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300006881\|Ga0068865_100705229	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	863	Open in IMG/M
3300006881\|Ga0068865_102092533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300006918\|Ga0079216_10157203	All Organisms → cellular organisms → Bacteria → Acidobacteria	1193	Open in IMG/M
3300006918\|Ga0079216_11091443	Not Available	628	Open in IMG/M
3300006954\|Ga0079219_10218038	All Organisms → cellular organisms → Bacteria → Acidobacteria	1101	Open in IMG/M
3300006954\|Ga0079219_11151369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300007076\|Ga0075435_100671283	All Organisms → cellular organisms → Bacteria → Acidobacteria	900	Open in IMG/M
3300009094\|Ga0111539_10354399	All Organisms → cellular organisms → Bacteria → Acidobacteria	1708	Open in IMG/M
3300009101\|Ga0105247_10089813	All Organisms → cellular organisms → Bacteria → Acidobacteria	1948	Open in IMG/M
3300009101\|Ga0105247_11024736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300009147\|Ga0114129_12206965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300009148\|Ga0105243_11987249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300009162\|Ga0075423_10264239	All Organisms → cellular organisms → Bacteria → Acidobacteria	1803	Open in IMG/M
3300009174\|Ga0105241_12668398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300009176\|Ga0105242_10041608	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3707	Open in IMG/M
3300009177\|Ga0105248_12187553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300009177\|Ga0105248_12324615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300009553\|Ga0105249_11647829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300010037\|Ga0126304_11182934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300010041\|Ga0126312_10606323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300010047\|Ga0126382_12540638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300010358\|Ga0126370_12424244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300010373\|Ga0134128_10752472	All Organisms → cellular organisms → Bacteria → Acidobacteria	1081	Open in IMG/M
3300010397\|Ga0134124_10323365	All Organisms → cellular organisms → Bacteria → Acidobacteria	1445	Open in IMG/M
3300010399\|Ga0134127_11161358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300010400\|Ga0134122_10406992	All Organisms → cellular organisms → Bacteria → Acidobacteria	1203	Open in IMG/M
3300010400\|Ga0134122_11907660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300010400\|Ga0134122_12052643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300010403\|Ga0134123_13008624	Not Available	540	Open in IMG/M
3300011415\|Ga0137325_1113708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300012200\|Ga0137382_10182560	All Organisms → cellular organisms → Bacteria → Acidobacteria	1436	Open in IMG/M
3300012203\|Ga0137399_11389498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300012515\|Ga0157338_1049401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300012582\|Ga0137358_10736248	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300012582\|Ga0137358_10812172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300012929\|Ga0137404_10592615	All Organisms → cellular organisms → Bacteria → Acidobacteria	996	Open in IMG/M
3300012930\|Ga0137407_11173862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	728	Open in IMG/M
3300012960\|Ga0164301_11250952	Not Available	599	Open in IMG/M
3300013100\|Ga0157373_10580034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	815	Open in IMG/M
3300013100\|Ga0157373_11370229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300013102\|Ga0157371_11155221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300013296\|Ga0157374_11347591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300013306\|Ga0163162_11416299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300013307\|Ga0157372_13238915	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300013308\|Ga0157375_11595027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300013308\|Ga0157375_11937443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300014325\|Ga0163163_11429427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300014497\|Ga0182008_10760506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300014745\|Ga0157377_11043937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300014745\|Ga0157377_11249218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300015262\|Ga0182007_10085056	All Organisms → cellular organisms → Bacteria → Acidobacteria	1039	Open in IMG/M
3300015264\|Ga0137403_11307645	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300015265\|Ga0182005_1269640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300015371\|Ga0132258_13528558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300015372\|Ga0132256_100684904	All Organisms → cellular organisms → Bacteria → Acidobacteria	1141	Open in IMG/M
3300015372\|Ga0132256_100746365	All Organisms → cellular organisms → Bacteria → Acidobacteria	1095	Open in IMG/M
3300015373\|Ga0132257_100141170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2815	Open in IMG/M
3300015374\|Ga0132255_101832080	All Organisms → cellular organisms → Bacteria → Acidobacteria	922	Open in IMG/M
3300017792\|Ga0163161_10223362	All Organisms → cellular organisms → Bacteria → Acidobacteria	1459	Open in IMG/M
3300018422\|Ga0190265_10705191	All Organisms → cellular organisms → Bacteria → Acidobacteria	1131	Open in IMG/M
3300018466\|Ga0190268_11881152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300018476\|Ga0190274_11669705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300021082\|Ga0210380_10342766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300021445\|Ga0182009_10251570	All Organisms → cellular organisms → Bacteria → Acidobacteria	877	Open in IMG/M
3300025321\|Ga0207656_10426304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300025711\|Ga0207696_1100184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	789	Open in IMG/M
3300025911\|Ga0207654_10844287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300025914\|Ga0207671_11159341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300025919\|Ga0207657_10543397	All Organisms → cellular organisms → Bacteria → Acidobacteria	909	Open in IMG/M
3300025925\|Ga0207650_10076445	All Organisms → cellular organisms → Bacteria → Acidobacteria	2530	Open in IMG/M
3300025925\|Ga0207650_10595545	All Organisms → cellular organisms → Bacteria → Acidobacteria	929	Open in IMG/M
3300025925\|Ga0207650_11711304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300025938\|Ga0207704_10577218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	917	Open in IMG/M
3300025941\|Ga0207711_10263084	All Organisms → cellular organisms → Bacteria → Acidobacteria	1586	Open in IMG/M
3300025941\|Ga0207711_10959013	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300025941\|Ga0207711_11165945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	712	Open in IMG/M
3300025945\|Ga0207679_11449752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300026035\|Ga0207703_10510078	All Organisms → cellular organisms → Bacteria → Acidobacteria	1130	Open in IMG/M
3300026078\|Ga0207702_11192125	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300026089\|Ga0207648_10330191	All Organisms → cellular organisms → Bacteria → Acidobacteria	1372	Open in IMG/M
3300026089\|Ga0207648_11337711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300026095\|Ga0207676_10354093	All Organisms → cellular organisms → Bacteria → Acidobacteria	1359	Open in IMG/M
3300026095\|Ga0207676_11179804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300026116\|Ga0207674_10134771	Not Available	2432	Open in IMG/M
3300026116\|Ga0207674_10597567	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300027639\|Ga0209387_1100323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300027775\|Ga0209177_10488496	Not Available	511	Open in IMG/M
3300027809\|Ga0209574_10106684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300027886\|Ga0209486_10845318	Not Available	603	Open in IMG/M
3300027886\|Ga0209486_11158667	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300027909\|Ga0209382_10089387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3620	Open in IMG/M
3300028138\|Ga0247684_1062601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300028381\|Ga0268264_11258139	All Organisms → cellular organisms → Bacteria → Acidobacteria	750	Open in IMG/M
3300030511\|Ga0268241_10185545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300031548\|Ga0307408_100077512	Not Available	2475	Open in IMG/M
3300031854\|Ga0310904_10452990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300031858\|Ga0310892_10142757	All Organisms → cellular organisms → Bacteria → Acidobacteria	1377	Open in IMG/M
3300031858\|Ga0310892_11223714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300031939\|Ga0308174_11096090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300031995\|Ga0307409_102240967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300032004\|Ga0307414_11872494	Not Available	560	Open in IMG/M
3300032180\|Ga0307471_100801676	All Organisms → cellular organisms → Bacteria → Acidobacteria	1109	Open in IMG/M
3300033486\|Ga0316624_11601882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	59.26%
Environmental	Environmental	40.74%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	59.26%
Terrestrial	Environmental → Terrestrial	39.51%
Aquatic	Environmental → Aquatic	1.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	24.69%
Roots	Host-Associated → Plants → Roots	1.23%
Freshwater	Environmental → Aquatic → Freshwater	0.62%
Sediment	Environmental → Aquatic → Sediment	0.62%
Rhizome	Host-Associated → Plants → Rhizome	0.62%
Phylloplane	Host-Associated → Plants → Phylloplane	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.99%
Loam	Environmental → Terrestrial → Soil → Loam	6.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.23%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.62%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.99%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.23%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.23%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.32%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.09%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.23%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.23%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.23%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.23%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.62%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.62%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.62%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_08765292	3300000033	Soil	TSLSESLNGLKGVGSLFVGRLSGARGVLAKSALTNLTIVATANELQIRTAVPSADVGPLMGGN*
JGI1027J12803_1063445362	3300000955	Soil	RLSGAKGALAKSALSNMKIVADANELQIRTTVAQAEIGPLFGN*
JGI10216J12902_1183949742	3300000956	Soil	IFVGRLSGARGVLAKSALTNLKIVAVTNELQIRTAVPSADIGPLMGN*
soilL2_100286992	3300003319	Sugarcane Root And Bulk Soil	LKQFGALFVGRLSGAKGVLAKSALANMKIVADANELQIRTSVAQAEVGPLLGN*
rootH2_103263752	3300003320	Sugarcane Root And Bulk Soil	SLFVGRMSGARGILAKSALTNLKIVNNADELQIRTAVPSADVGPLMGN*
Ga0062590_1017286172	3300004157	Soil	GLKQLGALFVGRLAGPKGVLAKSALSNLKIVTQANELQIRTAVAQTELGPLVGR*
Ga0062590_1028773642	3300004157	Soil	RLSGARGVLAKSALTNLQIVTQANELQIRTAVPQADIGPLVGTGN*
Ga0062595_1012151762	3300004479	Soil	LGSLFVGRLSGAKGVLAKSALANLQIVTAANELQIRTAVPQADIGPLMGTR*
Ga0062595_1018856851	3300004479	Soil	FGAALVGRLSGVKGVLAKSALSNMKIATDANELQIRTSVAQAEVGPLFGY*
Ga0062592_1005329231	3300004480	Soil	QLGGFFVGRLSGAKGVLAKSALANLKIVTQANELQIWTAVAQADVGPLMGN*
Ga0065704_105574881	3300005289	Switchgrass Rhizosphere	RLSGVKGVLAKSALSNMKIVTDANELQIRTSVAQAEVGPLFGY*
Ga0065712_107048071	3300005290	Miscanthus Rhizosphere	LSGARGVLAKSALTNLTIVTNANELQIRTAVPQADVGPLMGN*
Ga0065715_108927842	3300005293	Miscanthus Rhizosphere	TLEGLKQLGALFAGRLAGAKGVLAKTALSNLKIVTQANELQIRTAVAQADLGPLVGR*
Ga0065707_103954112	3300005295	Switchgrass Rhizosphere	RNLGDTLEGLKQFGALLVGRLGGAKGVLAKSALSNLKIVTDANELVIRTTVAQAEIGPLFGS*
Ga0070670_1003311511	3300005331	Switchgrass Rhizosphere	SGAKGVLAKSALSNMKIVADANELQIRTTVAQAEVGPLLGN*
Ga0070670_1004646572	3300005331	Switchgrass Rhizosphere	GLKQFGALLVGRLSGARGVLAKSALTNLQIVTQANELQIRTAVPQADIGPLMGTGN*
Ga0068869_1007521912	3300005334	Miscanthus Rhizosphere	DTIEGLKQFGALFMGRLTGAKGVLAKSALTNLKITTQANELQITTAVAQADIGPLMGN*
Ga0070661_1011822692	3300005344	Corn Rhizosphere	RLSGAKGVLAKSALSNMKIVTDANELQIRTNVAQAEVGPLLGY*
Ga0070692_100464991	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	GLKQFGALLVGRLTGARGVLAKSALSNLQIVTDANELQIRTSVAQAEIGPLLGK*
Ga0070688_1003253622	3300005365	Switchgrass Rhizosphere	KQFGALFVGRLTGAKGVLAKSALTNLKIVTNTNELQIRTAVAQSDIGPLMGN*
Ga0070694_1006418102	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	SGAKGVLAKSALSNMKISSAANELQIRTSVAQAEVGPLLGN*
Ga0070694_1012596082	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	NLGDTLEGLKQFGALLVGRLSGAKGVLAKSALSNMQIQSQANELQIRTTVTQAEIGPLFGY*
Ga0068867_1007408882	3300005459	Miscanthus Rhizosphere	FVGRLTGAKGVLAKSALANLKISSQANELQVRTAVAQSEIAPFLGN*
Ga0070707_1017666152	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GAKGVLAKSALANMTIVTAANELQIRTAVPQQDIGPLMGN*
Ga0070697_1006082492	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GRMTGAKGVLAKSALANMQIVTAANELQIRTAVPPEDIGPLMGN*
Ga0068853_1017875801	3300005539	Corn Rhizosphere	KQFGALLVGRLGGAKGVLAKSALSNLKIVTDANELVIRTTVAQAEIGPLFGS*
Ga0070686_1017725762	3300005544	Switchgrass Rhizosphere	LEGLKLFGAAFVGRLSGVKGVLAKSALSNMKIATDANELQIRTSVAQAEVGPLFGY*
Ga0070695_1002664501	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GRLSGAKGVLAKSALANMTIVTTANELQIRTAVPQADIGPLMGN*
Ga0070696_1003597282	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	IAGARGVLAKSALTNLKIVTDANELQIRTVVPQADLGPLMGN*
Ga0070704_1004825602	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	DTLEGLKQLGAFFVGRLSGARGVLAKSALTNLKVSTQANELQIRTAVAQADIAPFVGN*
Ga0070664_1000819571	3300005564	Corn Rhizosphere	AKGVLAKSALANLKIVTQANELQIWTAVAQADVGPLMGN*
Ga0068857_1012213002	3300005577	Corn Rhizosphere	SGARGVLAKSALANMQIQSTANELQIRTTVAQAEIGPLFGR*
Ga0068854_1007923092	3300005578	Corn Rhizosphere	GDTLEGLKQLGGFFVGRLSGAKGVLAKSALANLKIVTQANELQIWTAVAQADVGPLMGN*
Ga0068856_1013195511	3300005614	Corn Rhizosphere	KGVLAKSALSNLKIVSDANELQIRTTVAQAEVGPLFGY*
Ga0070702_1001587691	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	DSAKNLGDTIEGLKQFGALFMGRLTGAKGVLAKSALTNLKITTQANELQITTAVAQADIGPLMGN*
Ga0068852_1017953372	3300005616	Corn Rhizosphere	TLEGLKQFGALLVGRLTGARGVLAKSALSNLQIVTDANELQIRTSVAQAEIGPLLAK*
Ga0068859_1001107481	3300005617	Switchgrass Rhizosphere	VLAKSALSNLQIVSNANELQIRTSVAQAEIGPLFGY*
Ga0068859_1006456552	3300005617	Switchgrass Rhizosphere	GRLSGAKGVLAKSALSNMKISSAANELQIRTSVAQAEVGPLLGN*
Ga0068859_1024782412	3300005617	Switchgrass Rhizosphere	FGALLVGRLSGAKGILAKSALTNLRIVTDANELQIRTAVPQADVGPLMGN*
Ga0068864_1002457332	3300005618	Switchgrass Rhizosphere	KQFGALFMGRLTGAKGVLAKSALTNLKITTQANELQITTAVAQADIGPLMGN*
Ga0068864_1014914212	3300005618	Switchgrass Rhizosphere	GVLAKSALTNLQIVTQANELQIRTAVPQADIGPLMGTGH*
Ga0068863_1003665931	3300005841	Switchgrass Rhizosphere	GARGVLAKSALTNLTIVATANELQIRTAVPSADVGPLMGGN*
Ga0068863_1016458931	3300005841	Switchgrass Rhizosphere	EGLKQLGALFAGRLAGARGVLAKSALSNLKIVTQANELQIRTAVAQADLGPLVGR*
Ga0068858_1011786301	3300005842	Switchgrass Rhizosphere	GDTLEGLKQFGALLVGRLGGAKGVLAKSALSNLKIVTDANELVIRTTVAQAEIGPLFGS*
Ga0068860_1022136981	3300005843	Switchgrass Rhizosphere	EGLKQFGALFVGRLSGAKGVLAKSALSNMKISSAANELQIRTSVAQAEVGPLLGN*
Ga0068860_1022757011	3300005843	Switchgrass Rhizosphere	QFGALFVGRLSGAKGVLAKSALSNMKISSAANELQIRTSVAQAEVGPLLGN*
Ga0068862_1024402142	3300005844	Switchgrass Rhizosphere	LGDTLEGLKQFGALLVGRLGGAKGVLAKSALSNLKIVTDANELVIRTTVAQAEIGPLFGS
Ga0082029_12043223	3300006169	Termite Nest	ALLVGRLSGAKGVLAKSALSNMKIVADANELQIRTTVAQAEIGPLFGN*
Ga0075422_100248852	3300006196	Populus Rhizosphere	LGALLVGGMSGARGVLAKSALSNMQIQSQANELQIRTTVAQAEIGPLFGY*
Ga0068871_1006007001	3300006358	Miscanthus Rhizosphere	VLAKSALSNMKISSAANELQIRTSVAQAEVGPLLGN*
Ga0079222_105378852	3300006755	Agricultural Soil	AKSALANMQIVTAANELQIRTAVPQADVGPLMGGK*
Ga0079221_102556122	3300006804	Agricultural Soil	FVGRLSGAKGVLAKSALANMQIVTAANELQIRTAVPQADVGPLMGGK*
Ga0079220_112654702	3300006806	Agricultural Soil	GAKGVLAKSALSNLQIVSSANELQLRTSVAQAEIGPLLGN*
Ga0075428_1001791682	3300006844	Populus Rhizosphere	GVLAKSALSNLQIVTDANELQIRTSVAQAEIGPLLGN*
Ga0075428_1023369232	3300006844	Populus Rhizosphere	EAARNLGDTIESLKQLGGFFIGRLSGAKGVLAKSALSNLRIATQANELQIRTAVAQADIGPLVVN*
Ga0075428_1023615952	3300006844	Populus Rhizosphere	ARGVLAKSALTNLKVSTQANELQIRTAVAQADIAPFVGN*
Ga0075421_1009558952	3300006845	Populus Rhizosphere	FGALLVGRLSGAKGVLAKSALANMKIVADANELQIRTSVAQVEIGPLLGN*
Ga0075431_1007992871	3300006847	Populus Rhizosphere	RLSGAKGVLAKSALANMKIVADANELQIRTSVAQVEIGPLLGN*
Ga0075429_1008259081	3300006880	Populus Rhizosphere	ARNLGETLEGLKQLGALFVGRLTGAKGALAKSALANLKISTQANELQVRTAVTHAELAPLVGITKLGK*
Ga0068865_1007052292	3300006881	Miscanthus Rhizosphere	VLAKSALSNLTIVANANEVQIRTSVAQAEVGPLLGN*
Ga0068865_1020925331	3300006881	Miscanthus Rhizosphere	FGALFVGRMTGAKGVLAKSALTNLKIVTEANELKIRTAVAQSDVGLLIGN*
Ga0079216_101572031	3300006918	Agricultural Soil	LSGAKGVLAKSALSNMKIVADANELQIRTSVAQAEVGPLVGN*
Ga0079216_110914432	3300006918	Agricultural Soil	SLGDTLEGLKQFGALLVGRLSGARGVLAKSALTNLQIVTAANELQIRTAVPQADIGPLMGN*
Ga0079219_102180382	3300006954	Agricultural Soil	GSLFVGRLSGAKGVLAKSALANMQIVTAANELQIRTAVPQADVGPLMGGK*
Ga0079219_111513692	3300006954	Agricultural Soil	GAVMVGRLSGVKGVLAKSALANMKINTDANELQIRTTVAQAEVGPLFGY*
Ga0075435_1006712831	3300007076	Populus Rhizosphere	LEGLKQLGAMFITRFSGAKGVLAKSALKNLKITTQANELQIRTAVAQAAIAPVVGGL*
Ga0111539_103543991	3300009094	Populus Rhizosphere	AKGVLAKSALSNLQIVTDANELQIRTSVAQAEIGPLLGN*
Ga0105247_100898132	3300009101	Switchgrass Rhizosphere	KNLGDTLEGLQQFGALLAGRLSGAKGVLAKSALANMKILSQANELQIRTTIAQAEVGSLLGR*
Ga0105247_110247362	3300009101	Switchgrass Rhizosphere	GDTLEGLKQFGALFVGRLSGAKGVLAKSALSNMKISSAANELQIRTSVAQAEVGPLLGN*
Ga0114129_122069651	3300009147	Populus Rhizosphere	NLGDTIEGLKQFGALFVGRLSGAKGVLAKSALANMKIVTAANELQIRTAVPQADVGPLMGN*
Ga0105243_119872491	3300009148	Miscanthus Rhizosphere	GVLAKSALSNMKIVAAANELQIRTSVAQAEVGPLLGN*
Ga0075423_102642391	3300009162	Populus Rhizosphere	RNLSDTLEGLKQLGALFAGRLAGAKGVLAKTALSNLKIVTQANELQIRTAVAQADLGPLVAR*
Ga0105241_126683981	3300009174	Corn Rhizosphere	LQQFGALLAGRLSGAKGVLAKSALANMKILSQANELQIRTTIAQAEVGSLLGR*
Ga0105242_100416081	3300009176	Miscanthus Rhizosphere	PSARSLADTLEGLKQFGAFFVGRLTGAKGVLAKSALANLKISSQANELQVRTAVAQSEIAPFLGN*
Ga0105248_121875532	3300009177	Switchgrass Rhizosphere	ALFVGRLTGAKGVLAKSALTNLKIVTNTNELQIRTAVAQSDIGPLMGN*
Ga0105248_123246152	3300009177	Switchgrass Rhizosphere	DTLEGLKQLGGFFVGRLSGAKGVLAKSALANLKIVTQANELQIWTAVAQADVGPLMGN*
Ga0105249_116478291	3300009553	Switchgrass Rhizosphere	KGVLAKSALTNLKITTQANELQITTAVAQADIGPLMGN*
Ga0126304_111829342	3300010037	Serpentine Soil	LLVGRLSGAKGVLAKSALSNMKIVADANELQIRTSVAQAEVGPLLGN*
Ga0126312_106063231	3300010041	Serpentine Soil	LLVGRLSGAKGVLAKSALANLQIVTQANELQIRTAVPQADIGPLMGN*
Ga0126382_125406382	3300010047	Tropical Forest Soil	GRLGGAKGVLAKSALSNLKIVTDANELVIRTTVAQAEIGPLFGS*
Ga0126370_124242441	3300010358	Tropical Forest Soil	LEGLKQFGALFIGRLTGPKGVLAKSALTNLKITTQANELQIRTAVAQADIGPLMGN*
Ga0134128_107524721	3300010373	Terrestrial Soil	QLGALFAGRLAGAKGVLAKSALSNLKIVTQANELQIRTAVAQADIGPLVGR*
Ga0134124_103233651	3300010397	Terrestrial Soil	QLGTLKQLGAIFVMRLSGAKGVLAKSALSNMRIVSAANELQIRTSVAQAEVGPLFGY*
Ga0134127_111613581	3300010399	Terrestrial Soil	LGDTLEGLKQFGALLLWRLSGSKGVLAKSALANLQIVTQANELQIRTAVPQADIGPLMGN
Ga0134122_104069922	3300010400	Terrestrial Soil	SGVKGVLAKSALSNMKIVTNANELQIRTTVAQAEVGPLFGY*
Ga0134122_119076601	3300010400	Terrestrial Soil	LEGLKQFGGLFINRLTGAKGILAKSALTNLRIVTQANELQIRTAVAQAEIGPLMGN*
Ga0134122_120526432	3300010400	Terrestrial Soil	LAGRLSGAKGVLAKSALDNMKILSQANELQIRTTIAQAEVGSLLGR*
Ga0134123_130086242	3300010403	Terrestrial Soil	LSESLNGLKGLGSLFVGRLSGARGVVAKSALTNLTIVATANELQIRTAVPSADVGPLMGGN*
Ga0137325_11137082	3300011415	Soil	ALFVGRLTGPKGVLAKTALTNLKIVTQANELQIRTAVAQADIGPLVGN*
Ga0137382_101825602	3300012200	Vadose Zone Soil	LGGLFVNRLSGARGTLAKSALNNLKITTQANELQIRTAVAQAAIAPLMGGL*
Ga0137399_113894982	3300012203	Vadose Zone Soil	SGAKGVVAKSALTNLKITTQSNELQIRTAVAQADIGPLMAR*
Ga0157338_10494012	3300012515	Arabidopsis Rhizosphere	ARNLSDTLEGLKQFGALFVGRLTGAKGVLAKSALTNLKIVTNTNELQIRTAVAQSDIGPLMGN*
Ga0137358_107362482	3300012582	Vadose Zone Soil	RLSGARGTLAKSALNNLKITTQANELQIRTAVAQAAIAPLMGGL*
Ga0137358_108121722	3300012582	Vadose Zone Soil	KGTLARSALTNLKIATQANELEIRTAVAQADIGPLMGN*
Ga0137404_105926151	3300012929	Vadose Zone Soil	GLKQLGTIFIGRLTGAKGVLAKSALSNLKIVTQANELQIRTAVAQADIAPLMGK*
Ga0137407_111738622	3300012930	Vadose Zone Soil	DSARNLGDTLEGLKQLGALFVPRLSGAKSALAKSALNNLKITTQANELQIRTAIAQTAIAPLVGGL*
Ga0164301_112509522	3300012960	Soil	MFAGRLSGAKGVLAKSALANMQIVTAANELQIRTAVPQEDVGPLMGN*
Ga0157373_105800341	3300013100	Corn Rhizosphere	LFVGRISGAKGVLAKSALANMKIVADANELQIRTSVAQAEVGPLLGN*
Ga0157373_113702292	3300013100	Corn Rhizosphere	LGGAKGVLAKTALSNLKIVTDANELVIRTTVAQAEIGPLFGS*
Ga0157371_111552212	3300013102	Corn Rhizosphere	VLAKSALSNMKIVADANELQIRTSVAQAEIGPLFGI*
Ga0157374_113475911	3300013296	Miscanthus Rhizosphere	RNLGDTLEGLKQFGALFVGRLTGAKGVLAKSALTNLKIVTNTNELQIRTAVAQSDIGPLMGN*
Ga0163162_114162991	3300013306	Switchgrass Rhizosphere	LEGLKQLGALFAGRLAGPKGVLAKSALSNLKIVTLANELQIRTAVPQADIGTLVAR*
Ga0157372_132389151	3300013307	Corn Rhizosphere	GLKQLGGLLVGGMSGARGVLAKSALSNMQIQSQANELQIRTTVAQAEIGPLFGY*
Ga0157375_115950272	3300013308	Miscanthus Rhizosphere	SGAKGVLAKSALSNMKIVADANELQIRTSVAQAEIGPLFGI*
Ga0157375_119374431	3300013308	Miscanthus Rhizosphere	DTLEGLKQFGALFVGRLTGAKGVLAKSALTNLKIVTNTNELQIRTAVAQSDIGPLMGN*
Ga0163163_114294272	3300014325	Switchgrass Rhizosphere	AKSALTNLKVVTQANELQVRTSVAQADIGPLVGN*
Ga0182008_107605061	3300014497	Rhizosphere	VGRLSGAKGVLAKSALSNMKIVSAANELQIRTTVAQAQVGPLFGY*
Ga0157377_110439371	3300014745	Miscanthus Rhizosphere	DTLEGLKQFGALFVGRLSGAKGVLAKSALSNMKISSAANELQIRTSVAQAEVGPLLGN*
Ga0157377_112492182	3300014745	Miscanthus Rhizosphere	TLEGLKQFGALFVGRLSGAKGVLAKSALSNMKIVAAANELQIRTSVAQAEVGPLLGN*
Ga0182007_100850562	3300015262	Rhizosphere	VGRLSGAKGVLAKSALSNLQIVSNANELQIRTSVAQAEIGPLLGN*
Ga0137403_113076452	3300015264	Vadose Zone Soil	PDSARNLGDTLEGLKQLGALFVPRLSGAKSALAKSALNNLKITTQANELQIRTAIAQTAIAPLVGGL*
Ga0182005_12696402	3300015265	Rhizosphere	QLGSLFGGRISGAKGVLAKSGLANLQIVTAANELQIRTAVPQADVGPLMGGK*
Ga0132258_135285582	3300015371	Arabidopsis Rhizosphere	AAKNLGDTLEGLKQFGALFMGRLTGAKGVLAKSALTNLKITTQANELQLTTAVAQADIGPLMGN*
Ga0132256_1006849042	3300015372	Arabidopsis Rhizosphere	MFVGRLSGAKGVLAKSALANMQISTAANELQIRTAVPQADVGPLMGN*
Ga0132256_1007463652	3300015372	Arabidopsis Rhizosphere	LLVGRLAGAKGVLAKSALSNMKIVADANELQIRTTVAQAEIGPLFGN*
Ga0132257_1001411703	3300015373	Arabidopsis Rhizosphere	VGRLTGAKGVLAKSALANLKISSQANELQVRTAVAQSEIAPFLGN*
Ga0132255_1018320802	3300015374	Arabidopsis Rhizosphere	ALLVGRLGGAKGVLAKSALSNLKIVTDANELVIRTTVAQAEIGPLFGS*
Ga0163161_102233621	3300017792	Switchgrass Rhizosphere	QFGALFVGRLSGAKGVLAKSALSNMKISSAANELQIRTSVAQAEVGPLLGN
Ga0190265_107051912	3300018422	Soil	LFVGRISGARGVLAKSALTNLKIVNNADELQIRTAVPSADVGPLMGQ
Ga0190268_118811522	3300018466	Soil	ALKQFGGMFVGRLTGAKGVLAKSALTNLKISTQANELQIRTAVAQADIAPLVVN
Ga0190274_116697051	3300018476	Soil	QFGSFFVGRLSGAKGVLAKSALSNLKIVADANELQIRTSVAQAEVGPLLGN
Ga0210380_103427662	3300021082	Groundwater Sediment	LGDTLEGLKQFGALFVGRLTGPKGVLAKTALTNLKIVTQANELQIRTAVAQADIGPLVGN
Ga0182009_102515702	3300021445	Soil	GVLAKSALSNLQIVSNANELQIRTSVAQAEIGPLLGN
Ga0207656_104263042	3300025321	Corn Rhizosphere	NLGDRLVVLKQFGALFVGRLTGAKGVLAKSALTNLKIVTNTNELQIRTAVAQSDIGPLMG
Ga0207696_11001841	3300025711	Switchgrass Rhizosphere	GLKQFGALFVGRLSGAKGVLAKSALSNMKISSAANELQIRTSVAQAEVGPLLGN
Ga0207654_108442871	3300025911	Corn Rhizosphere	KGVLAKSALTNMQIVSQANELQIRTTVPQADVGPLLGN
Ga0207671_111593411	3300025914	Corn Rhizosphere	KGVLAKSALSNLKIVTQANELQIRTAVAQADIGPLVGR
Ga0207657_105433971	3300025919	Corn Rhizosphere	KGVLAKSALANLKIVTQANELQIWTAVAQADVGPLMGN
Ga0207650_100764453	3300025925	Switchgrass Rhizosphere	LAKSALSNMKIVSDANELQIRTTVAQAEVGPLFGY
Ga0207650_105955452	3300025925	Switchgrass Rhizosphere	QFGALLVGRLSGAKGVLAKSALSNMKIVADANELQIRTTVAQAEVGPLLGN
Ga0207650_117113041	3300025925	Switchgrass Rhizosphere	EGLQQFGALLAGRLSGAKGVLAKSALANMKILSQANELQIRTTIAQAEVGSLLGR
Ga0207704_105772181	3300025938	Miscanthus Rhizosphere	GAFFVGRLSGAKGVLAKSALSNLTIVANANEVQIRTSVAQAEVGPLLGN
Ga0207711_102630841	3300025941	Switchgrass Rhizosphere	AKGVLAKSALANLKISSQANELQVRTAVAQSEIAPFLGN
Ga0207711_109590132	3300025941	Switchgrass Rhizosphere	RLGGAKGVLAKTALSNLKIVTDANELVIRTTVAQAEIGPLFGY
Ga0207711_111659451	3300025941	Switchgrass Rhizosphere	ILAKSALTNLRIVTDANELQIRTAVPQADVGPLMGN
Ga0207679_114497522	3300025945	Corn Rhizosphere	KGVLAKSALANMKIVADANELQIRTSVAQAEVGPLLGN
Ga0207703_105100781	3300026035	Switchgrass Rhizosphere	LFVGRMTGAKGVLAKSALTNLKIVTEANELKIRTAVAQSDVGLLIGN
Ga0207702_111921251	3300026078	Corn Rhizosphere	KGVLAKSALSNLKIVSDANELQIRTTVAQAEVGPLFGY
Ga0207648_103301911	3300026089	Miscanthus Rhizosphere	GLQQFGALLAGRLSGAKGVLAKSALANMKILSQANELQIRTTIAQAEVGSLLGR
Ga0207648_113377111	3300026089	Miscanthus Rhizosphere	LKQFGALFVGRLSGAKGVLAKSALSNMKIVAAANELQIRTSVAQAEVGPLLGN
Ga0207676_103540933	3300026095	Switchgrass Rhizosphere	GLKQLGSLFVGRLSGAKGVLAKSALANMQIVTAANELQIRTAVPQQDIGPLMGN
Ga0207676_111798041	3300026095	Switchgrass Rhizosphere	DTLEGLKQFGALLVGRLSGARGILAKSALTNLQIVTQANELQIRTAVPQADIGPLMGTGH
Ga0207674_101347712	3300026116	Corn Rhizosphere	EGLQQFGALLAGRLSGAKGVLAKSALANMKILTQTNELQIRTTIAQAEVGSLLGR
Ga0207674_105975671	3300026116	Corn Rhizosphere	LVGRLSGAKGVLAKSALSNMKIVAAANELQIRTSVAQAEVGPLFGN
Ga0209387_11003231	3300027639	Agricultural Soil	RLSGARGELAKSALANLKIVTTANELQIRTAVAQADVGPLVGGN
Ga0209177_104884961	3300027775	Agricultural Soil	NGLKGVGSLFVGRLSGARGVLAKSALTNLTIVATANELQIRTAVPSADVGPLMGGN
Ga0209574_101066841	3300027809	Agave	TLEGLKQFGALFVGRLSGAKGVLAKSALSNLQIVSNANELQIRTSVAQAEIGPLFGN
Ga0209486_108453182	3300027886	Agricultural Soil	FATSALTNLKIVADANELQIRTAVPSADIGPLIGN
Ga0209486_111586671	3300027886	Agricultural Soil	LADIGSLFAGRLSGARGVLAKSALTNLKIATDANELQIRTAVPSADVGPLMGN
Ga0209382_100893871	3300027909	Populus Rhizosphere	ALLVGRLSGAKGVLAKSALANMKIVADANELQIRTSVAQVEIGPLLGN
Ga0247684_10626012	3300028138	Soil	GRLSGAKGVLAKSALANMKIVTAANELQIRTAVPQADIGPLMGN
Ga0268264_112581392	3300028381	Switchgrass Rhizosphere	VGRLSGARGVVAKSALTNLTIVATANELQIRTAVPSADVGPLMGGN
Ga0268241_101855451	3300030511	Soil	LGDTLEGLKQFGALFVGRLSGAKGVLAKSALSNLQIVSQANELQIRTRVAQAEIGPLLGN
Ga0307408_1000775121	3300031548	Rhizosphere	FGAAMVGRLSGAKGVLAKSALSNMKIVADANELQIRTSVAQAEIGPLFGI
Ga0310904_104529901	3300031854	Soil	KQFGALFVGRLTGAKGVLAKSALTNLKIVTNTNELQIRTAVAQSDIGPLMGN
Ga0310892_101427572	3300031858	Soil	AGARGVLAKSALTNLKIVTDANELQIRTVVPQADLGPLMGN
Ga0310892_112237142	3300031858	Soil	NLGETLEGLKQLGAFFVGRLSGARGVLAKSALTNLKVSTQANELQIRTAVAQADIAPFVG
Ga0308174_110960902	3300031939	Soil	LAKSALSNMQIVSQANELQIRTSVAQAEIGPLLGN
Ga0307409_1022409671	3300031995	Rhizosphere	AKGVLAKSALSNMSIVADANELQVKISVAQAEVAPLLGN
Ga0307414_118724941	3300032004	Rhizosphere	FVGRLSGARGVLAKSALANLKIATTANELQIRTAVAQADVGPLVGN
Ga0307471_1008016762	3300032180	Hardwood Forest Soil	GRLTGPKGVLAKSALTNLKITTQANELQIRTAVAQADIGPLMGN
Ga0316624_116018822	3300033486	Soil	RLSGAKGVLAKSALSNLKIVTQANELQIRTAVAQAEIAPLMGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F040317

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences