Metagenome Family F040545

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040545
Family Type	Metagenome
Number of Sequences	161
Average Sequence Length	52 residues
Representative Sequence	SAPARVPALPVTLVWRPAARRQPALARLAALLVTAGARVGARLSRGRRDR
Number of Associated Samples	131
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.63 %
% of genes near scaffold ends (potentially truncated)	96.27 %
% of genes from short scaffolds (< 2000 bps)	91.30 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.578 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (10.559 % of family members)
Environment Ontology (ENVO)	Unclassified (22.360 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (35.404 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF14534	DUF4440	13.04
PF00496	SBP_bac_5	6.83
PF00903	Glyoxalase	6.21
PF00578	AhpC-TSA	5.59
PF10417	1-cysPrx_C	4.97
PF00155	Aminotran_1_2	4.35
PF12867	DinB_2	3.11
PF00211	Guanylate_cyc	2.48
PF03328	HpcH_HpaI	2.48
PF01425	Amidase	2.48
PF04199	Cyclase	1.86
PF13714	PEP_mutase	1.86
PF02515	CoA_transf_3	1.86
PF04392	ABC_sub_bind	1.24
PF03779	SPW	1.24
PF00144	Beta-lactamase	1.24
PF00691	OmpA	1.24
PF07596	SBP_bac_10	1.24
PF03061	4HBT	1.24
PF00561	Abhydrolase_1	1.24
PF06224	HTH_42	0.62
PF13561	adh_short_C2	0.62
PF05685	Uma2	0.62
PF04773	FecR	0.62
PF00392	GntR	0.62
PF01619	Pro_dh	0.62
PF01970	TctA	0.62
PF13416	SBP_bac_8	0.62
PF00296	Bac_luciferase	0.62
PF13560	HTH_31	0.62
PF08780	NTase_sub_bind	0.62
PF08534	Redoxin	0.62
PF08402	TOBE_2	0.62
PF13738	Pyr_redox_3	0.62
PF07355	GRDB	0.62
PF03466	LysR_substrate	0.62
PF13185	GAF_2	0.62
PF02581	TMP-TENI	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	2.48
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	2.48
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.48
COG2165	Type II secretory pathway, pseudopilin PulG	Cell motility [N]	2.48
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	2.48
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	2.48
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.86
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	1.86
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.24
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.24
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.24
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.24
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	0.62
COG0506	Proline dehydrogenase	Amino acid transport and metabolism [E]	0.62
COG1784	TctA family transporter	General function prediction only [R]	0.62
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.62
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.62
COG3333	TctA family transporter	General function prediction only [R]	0.62
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.58 %
Unclassified	root	N/A	12.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.58 %
Unclassified	root	N/A	12.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.58 %
Unclassified	root	N/A	12.42 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.43 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	22.98 %
Unclassified	root	N/A	12.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	22.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.42 %
Unclassified	root	N/A	12.42 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.24 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.62 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	21.12 %
Unclassified	root	N/A	12.42 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.35 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.73 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	2.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.24 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	19.25 %
Unclassified	root	N/A	12.42 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	2.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.86 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.24 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.24 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.62 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	19.25 %
Unclassified	root	N/A	12.42 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	2.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.86 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	1.24 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	1.24 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.62 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	19.25 %
Unclassified	root	N/A	12.42 %
Pseudomonas fluorescens group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group	2.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.86 %
unclassified Polaromonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas	1.24 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1.24 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.62 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	19.25 %
Unclassified	root	N/A	12.42 %
Pseudomonas mandelii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas mandelii	2.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.86 %
Polaromonas sp. A23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp. A23	1.24 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1.24 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000574\|JGI1357J11328_10178875	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300002912\|JGI25386J43895_10039604	All Organisms → cellular organisms → Bacteria → Proteobacteria	1377	Open in IMG/M
3300004009\|Ga0055437_10083092	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300004019\|Ga0055439_10087996	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300004024\|Ga0055436_10062347	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300004114\|Ga0062593_102242045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	613	Open in IMG/M
3300004268\|Ga0066398_10174125	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300004479\|Ga0062595_102614202	Not Available	506	Open in IMG/M
3300005174\|Ga0066680_10672582	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300005353\|Ga0070669_100670707	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300005445\|Ga0070708_100377530	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300005445\|Ga0070708_101760118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	575	Open in IMG/M
3300005447\|Ga0066689_10845931	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005459\|Ga0068867_100616741	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300005471\|Ga0070698_101035512	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005518\|Ga0070699_101330125	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005518\|Ga0070699_101931609	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	540	Open in IMG/M
3300005536\|Ga0070697_101874237	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005545\|Ga0070695_100528364	Not Available	916	Open in IMG/M
3300005553\|Ga0066695_10217472	All Organisms → cellular organisms → Bacteria → Proteobacteria	1201	Open in IMG/M
3300005561\|Ga0066699_11269708	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300005713\|Ga0066905_101748700	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005764\|Ga0066903_104246098	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300005829\|Ga0074479_10865691	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1082	Open in IMG/M
3300005884\|Ga0075291_1044872	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	585	Open in IMG/M
3300006046\|Ga0066652_102035797	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300006049\|Ga0075417_10275124	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300006796\|Ga0066665_11583497	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300006800\|Ga0066660_10070303	All Organisms → cellular organisms → Bacteria	2371	Open in IMG/M
3300006800\|Ga0066660_10161577	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300006844\|Ga0075428_100246034	All Organisms → cellular organisms → Bacteria → Proteobacteria	1928	Open in IMG/M
3300006845\|Ga0075421_100797615	All Organisms → cellular organisms → Bacteria → Proteobacteria	1087	Open in IMG/M
3300006854\|Ga0075425_101099862	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300006871\|Ga0075434_100621403	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300006904\|Ga0075424_100414068	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300006914\|Ga0075436_100138127	All Organisms → cellular organisms → Bacteria → Proteobacteria	1712	Open in IMG/M
3300006914\|Ga0075436_101162111	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300006954\|Ga0079219_11073998	Not Available	679	Open in IMG/M
3300007076\|Ga0075435_101852770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas mandelii	529	Open in IMG/M
3300009012\|Ga0066710_100902951	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300009012\|Ga0066710_102669632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	714	Open in IMG/M
3300009012\|Ga0066710_103025744	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	654	Open in IMG/M
3300009012\|Ga0066710_104116529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300009090\|Ga0099827_10443768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1112	Open in IMG/M
3300009147\|Ga0114129_10262749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2312	Open in IMG/M
3300009147\|Ga0114129_12109116	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	680	Open in IMG/M
3300009174\|Ga0105241_12226524	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300009792\|Ga0126374_10702141	All Organisms → cellular organisms → Bacteria → Proteobacteria	761	Open in IMG/M
3300009792\|Ga0126374_11181848	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	611	Open in IMG/M
3300009792\|Ga0126374_11430024	Not Available	564	Open in IMG/M
3300009804\|Ga0105063_1018246	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300009804\|Ga0105063_1071118	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300009816\|Ga0105076_1031696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	934	Open in IMG/M
3300009821\|Ga0105064_1105482	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300009837\|Ga0105058_1067081	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300010043\|Ga0126380_11474520	Not Available	601	Open in IMG/M
3300010043\|Ga0126380_11631504	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300010047\|Ga0126382_10034947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2800	Open in IMG/M
3300010360\|Ga0126372_13042255	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	520	Open in IMG/M
3300010361\|Ga0126378_10546165	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300010361\|Ga0126378_11142701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300010366\|Ga0126379_10544045	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1240	Open in IMG/M
3300010391\|Ga0136847_10149580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1059	Open in IMG/M
3300010391\|Ga0136847_11717505	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1368	Open in IMG/M
3300010398\|Ga0126383_10943367	All Organisms → cellular organisms → Bacteria → Proteobacteria	950	Open in IMG/M
3300010400\|Ga0134122_11938544	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300010401\|Ga0134121_11421648	Not Available	705	Open in IMG/M
3300011270\|Ga0137391_10326832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1320	Open in IMG/M
3300011440\|Ga0137433_1057156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300012199\|Ga0137383_10113970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1968	Open in IMG/M
3300012203\|Ga0137399_10310125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1305	Open in IMG/M
3300012206\|Ga0137380_11568192	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300012207\|Ga0137381_10390843	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300012211\|Ga0137377_10731583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	923	Open in IMG/M
3300012350\|Ga0137372_10356684	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1118	Open in IMG/M
3300012353\|Ga0137367_10499346	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300012355\|Ga0137369_10498058	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300012357\|Ga0137384_10431835	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1085	Open in IMG/M
3300012358\|Ga0137368_10579042	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	715	Open in IMG/M
3300012361\|Ga0137360_11089051	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012490\|Ga0157322_1040529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	533	Open in IMG/M
3300012582\|Ga0137358_10298965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1093	Open in IMG/M
3300012918\|Ga0137396_10883063	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	656	Open in IMG/M
3300012922\|Ga0137394_11020638	Not Available	687	Open in IMG/M
3300012931\|Ga0153915_11360062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300012944\|Ga0137410_10948624	Not Available	730	Open in IMG/M
3300012948\|Ga0126375_11247130	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300012971\|Ga0126369_10493012	All Organisms → cellular organisms → Bacteria → Proteobacteria	1282	Open in IMG/M
3300012971\|Ga0126369_10698820	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300013102\|Ga0157371_11138515	Not Available	599	Open in IMG/M
3300013306\|Ga0163162_12373086	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300013308\|Ga0157375_11319973	All Organisms → cellular organisms → Bacteria → Proteobacteria	848	Open in IMG/M
3300014154\|Ga0134075_10177829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	913	Open in IMG/M
3300014154\|Ga0134075_10537300	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300014871\|Ga0180095_1112349	Not Available	508	Open in IMG/M
3300014881\|Ga0180094_1129609	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300014883\|Ga0180086_1197973	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300015259\|Ga0180085_1029137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1550	Open in IMG/M
3300015371\|Ga0132258_11694102	All Organisms → cellular organisms → Bacteria → Proteobacteria	1595	Open in IMG/M
3300015372\|Ga0132256_100349131	All Organisms → cellular organisms → Bacteria → Proteobacteria	1573	Open in IMG/M
3300015372\|Ga0132256_100518695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1303	Open in IMG/M
3300015374\|Ga0132255_104189066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas mandelii	612	Open in IMG/M
3300017997\|Ga0184610_1002155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4459	Open in IMG/M
3300018032\|Ga0187788_10176308	Not Available	818	Open in IMG/M
3300018063\|Ga0184637_10014507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4734	Open in IMG/M
3300018063\|Ga0184637_10187633	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300018079\|Ga0184627_10038313	All Organisms → cellular organisms → Bacteria	2448	Open in IMG/M
3300018089\|Ga0187774_11094206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas mandelii	563	Open in IMG/M
3300018422\|Ga0190265_13666515	Not Available	512	Open in IMG/M
3300018431\|Ga0066655_11210781	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300020200\|Ga0194121_10001249	All Organisms → cellular organisms → Bacteria → Proteobacteria	43999	Open in IMG/M
3300021061\|Ga0196973_1137235	Not Available	501	Open in IMG/M
3300022694\|Ga0222623_10169764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	849	Open in IMG/M
3300025569\|Ga0210073_1112013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp. A23	591	Open in IMG/M
3300025569\|Ga0210073_1125365	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300025922\|Ga0207646_10931640	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	770	Open in IMG/M
3300025922\|Ga0207646_11638780	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300025927\|Ga0207687_10975666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300025930\|Ga0207701_10395695	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300025930\|Ga0207701_10468440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1080	Open in IMG/M
3300025961\|Ga0207712_10385598	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300026317\|Ga0209154_1162649	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	915	Open in IMG/M
3300026343\|Ga0209159_1104909	All Organisms → cellular organisms → Bacteria → Proteobacteria	1223	Open in IMG/M
3300026377\|Ga0257171_1095295	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300026540\|Ga0209376_1023401	All Organisms → cellular organisms → Bacteria → Proteobacteria	4034	Open in IMG/M
3300027654\|Ga0209799_1056051	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300027775\|Ga0209177_10276697	Not Available	630	Open in IMG/M
3300027873\|Ga0209814_10349764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas mandelii	646	Open in IMG/M
3300027909\|Ga0209382_10082223	All Organisms → cellular organisms → Bacteria	3793	Open in IMG/M
3300028608\|Ga0247819_10275996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	933	Open in IMG/M
3300031544\|Ga0318534_10007839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5207	Open in IMG/M
3300031680\|Ga0318574_10010863	All Organisms → cellular organisms → Bacteria → Proteobacteria	4135	Open in IMG/M
3300031716\|Ga0310813_11074665	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	737	Open in IMG/M
3300031720\|Ga0307469_10033636	All Organisms → cellular organisms → Bacteria	3014	Open in IMG/M
3300031720\|Ga0307469_10291440	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300031720\|Ga0307469_10443701	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300031720\|Ga0307469_10523509	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300031720\|Ga0307469_10682064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	929	Open in IMG/M
3300031740\|Ga0307468_100405777	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300031740\|Ga0307468_101538407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp. A23	618	Open in IMG/M
3300031740\|Ga0307468_102118882	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	542	Open in IMG/M
3300031740\|Ga0307468_102272039	Not Available	526	Open in IMG/M
3300031769\|Ga0318526_10357122	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300031892\|Ga0310893_10152332	Not Available	900	Open in IMG/M
3300031949\|Ga0214473_10861699	Not Available	970	Open in IMG/M
3300032044\|Ga0318558_10631284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	535	Open in IMG/M
3300032180\|Ga0307471_104050612	Not Available	518	Open in IMG/M
3300032205\|Ga0307472_100706941	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300032770\|Ga0335085_10690828	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300032893\|Ga0335069_10317885	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300033004\|Ga0335084_10283137	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1714	Open in IMG/M
3300033158\|Ga0335077_11867258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300033290\|Ga0318519_10240598	All Organisms → cellular organisms → Bacteria → Proteobacteria	1044	Open in IMG/M
3300033807\|Ga0314866_065734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	614	Open in IMG/M
3300033811\|Ga0364924_092377	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300034090\|Ga0326723_0454926	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300034149\|Ga0364929_0085466	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300034165\|Ga0364942_0234504	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	599	Open in IMG/M
3300034417\|Ga0364941_019781	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.61%
Host-Associated	Host-Associated	17.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.57%
Plants	Host-Associated → Plants	17.39%
Aquatic	Environmental → Aquatic	13.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.29%
Sediment	Environmental → Aquatic → Sediment	6.83%
Freshwater	Environmental → Aquatic → Freshwater	3.11%
Marine	Environmental → Aquatic → Marine	3.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.11%
Floodplain	Environmental → Terrestrial → Floodplain	2.48%
Peat	Environmental → Terrestrial → Peat	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.42%
Loam	Environmental → Terrestrial → Soil → Loam	8.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.97%
Sand	Environmental → Terrestrial → Soil → Sand	3.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.11%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.48%
Lake	Environmental → Aquatic → Freshwater → Lake	1.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.62%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.97%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.11%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.48%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.24%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.24%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.62%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.62%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.62%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.73%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.11%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.11%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.11%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.48%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.24%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.62%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.62%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.62%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.62%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.62%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.62%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.62%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014871	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1Da	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental	Open in IMG/M
3300021061	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5-13C	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1357J11328_101788752	3300000574	Groundwater	GVGLVPALALAEAPSDRVVRERAKMPALPVTLVWRAAARRPPALTRLAALLTAAGARVSARLKKN*
JGI25386J43895_100396042	3300002912	Grasslands Soil	LAEAPADRVVSVPARVPALPVTLVWRTAARRQPALARLADLLATAGARVGARLTRARRRT
Ga0055437_100830921	3300004009	Natural And Restored Wetlands	ALALVEAPSDSVVREPAKMPALPVTLVWRAAARRQPALTRLAALLTAAGARVSARLKKN*
Ga0055439_100879961	3300004019	Natural And Restored Wetlands	LVPALALAEAPSGQVVREPARMPALPVTLVWRAAARRQPALTRLATLLAAAGARVGARLARVSLSPGLRRG*
Ga0055436_100623471	3300004024	Natural And Restored Wetlands	VPALALSEAPADRTVSAPARVPTLPVTLVWRPAAHRQPALARLATLLITAGARAGARLARLRRTP*
Ga0062593_1022420452	3300004114	Soil	EPARVPALPVTLVWRAAARRQPALARLADLLAAAGARAGSRLRGARIRPAKPTP*
Ga0066398_101741252	3300004268	Tropical Forest Soil	GLVPALALAEAPAGLVVREPARMPALPVTLVWRAAARRPPALTRFAALLATAGTRVGARLSRPARD*
Ga0062595_1026142021	3300004479	Soil	GRVVTEPARVPALPVSLVWRAAARRPLALARLADLLAAAGKRAGARIRGAKEA*
Ga0066680_106725822	3300005174	Soil	VSAPARVPALPVALVWRPAARRQPALARLASLLQTAGARAGARLARAWP*
Ga0070669_1006707071	3300005353	Switchgrass Rhizosphere	VPALPVALVWRAAARRPPALGRLTALLVAAGARVGARLRGGGPRGRRSV*
Ga0070708_1003775302	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DRVVNARARVPALPVTLIWRPATRRQPALARLTDLLATAGARAGARLTRATRQG*
Ga0070708_1017601181	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	EPAKMPALPVTLVWRAAARRQPALTRLAALLTAAGARVGARLKKN*
Ga0066689_108459312	3300005447	Soil	ADRVVSERARVPALPVTLVWRPAARRLPALARLADLLTAAGARAGARLARARGKALS*
Ga0068867_1006167413	3300005459	Miscanthus Rhizosphere	DRVVSAPARVPALPVALVWRAAARRPPALGRLTALLVAAGARVGARLQRNGTLRSHRSD*
Ga0070698_1010355121	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	SLAEAPMERVVREPAKMPALPVTLVWRAAARRQPALTRLAALLTAAGARVGARLKKN*
Ga0070699_1013301252	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RVSPLPVTLVWRATARRQPALARLVDLLAAAGARTGARLARARHA*
Ga0070699_1019316092	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LAEAPADRVVSMRARVPALPVSLICRPAARRQPALARLADLLAGAGARAGAKLSRAVR*
Ga0070697_1018742371	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VREPAKMPALPVTLVWRAAARRQPALTRLAALLIAAGARVGARLKKN*
Ga0070695_1005283641	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	WRPAARRQPALARLAALLATAGARVGARLARGRRPEPRTV*
Ga0066695_102174722	3300005553	Soil	GQVVREPARMPALPVTLVWRAAARRQPALTRLATLLIAAAARVGAKLARPPRG*
Ga0066699_112697082	3300005561	Soil	AKMPALPVTLVWRAAARRQPALTRLAALLTAAGARVGARLKKN*
Ga0066905_1017487001	3300005713	Tropical Forest Soil	VPALALAEAPAGLVVREPARMPALPVTLVWRAAARRPPALTRLAALLAEAGARVGAKLG*
Ga0066903_1042460981	3300005764	Tropical Forest Soil	VVTTPARVPPLPVSLLWRPAARRPPALARLAELLAAAGARVGARLVRARRR*
Ga0074479_108656914	3300005829	Sediment (Intertidal)	PALALVEAPSDRVVREPAKMPALPVTLVWRAAARRQPALTRLAALLTAAGARVSARLARARRGG*
Ga0075291_10448721	3300005884	Rice Paddy Soil	PARVPALPVALVWRPAARRPPALARLASLLQAAGARAGARLARAWG*
Ga0066652_1020357971	3300006046	Soil	GLVPALALAEAPSGQVVREPARMPALPVTLVWRAAARRQPALTRLATLLIAAAARVGAKLARPPRG*
Ga0075417_102751242	3300006049	Populus Rhizosphere	LALAEAPTDRIVTTPARVPALPVVLMWRSAARRQPALARLASLLAQAGARVGSRLSRRSS
Ga0066665_115834971	3300006796	Soil	PADRVVSAPARVPALPVTLVWRTAARRQPALARLADLLATAGARVGARLTRARRST*
Ga0066660_100703034	3300006800	Soil	RRQPALARLATLLADAGARIGARLVGPRRQRQRG*
Ga0066660_101615771	3300006800	Soil	RVVSARARVPALPVALVWRPAARRPPALARLASLLQIAGARAGARLARASR*
Ga0075428_1002460341	3300006844	Populus Rhizosphere	LALVESLPDRVVTTPARVPPLPVSLLWRPAARRQPALARLAELLAAAGARVGARLVRARRR*
Ga0075421_1007976151	3300006845	Populus Rhizosphere	ARVPALPVTLVWRPTARRQPALARLADRLAVAGARAGVKLATAR*
Ga0075421_1024859112	3300006845	Populus Rhizosphere	LPVALVWRAAARRPPALTRLADLLAAAGARLARAAGVSVRRH*
Ga0075425_1010998623	3300006854	Populus Rhizosphere	RVPALPVALVWRAAVRRPPALARLAELLARAGARAGAGLVRRRRARV*
Ga0075434_1006214031	3300006871	Populus Rhizosphere	ALPVTLVWRPAARRPPALARLAALLAAAGGRAGARLARARRRGLSRV*
Ga0075424_1004140681	3300006904	Populus Rhizosphere	LPVTLVWRPAARRPPALARLAALLAAAGGRAGARLARARRRGLSRV*
Ga0075436_1001381271	3300006914	Populus Rhizosphere	ALVWRAAARRPPALTRLAALLAAAGTRVGARLGRPARAG*
Ga0075436_1011621111	3300006914	Populus Rhizosphere	GIGLVPALALAEALPDRVVTTPARVPPLPVALIWRPAARRQPALARLAELLAAAGARVGARLVRARRR*
Ga0079219_110739981	3300006954	Agricultural Soil	PRGRIVREPARVPALPVALLWRASTRRQPALTRLASLLAAAGARVGARLAR*
Ga0075435_1018527701	3300007076	Populus Rhizosphere	VPALPVALLWRASARRQPALARLASLLATAGARVGARLARRRG*
Ga0066710_1009029511	3300009012	Grasslands Soil	VPSLPVTLVWRATARRQPALARLADLLATAGARAGAKLARRGHSAVAV
Ga0066710_1026696321	3300009012	Grasslands Soil	HEPAKRPALPVTLVWRAAARRQPALTRLAALLTAAGARVGAKLKKN
Ga0066710_1030257442	3300009012	Grasslands Soil	IGLVPALALGEAPRDRVVSAPARVPALPVALMWRQSARRPPALTSLVELLARAGARVGVKLARASRGT
Ga0066710_1041165292	3300009012	Grasslands Soil	LALAEAPAGQVVREPARMPALPVTLVWRTAARRQPALTRLATLLTAAGARVGAKLARPAR
Ga0099827_104437681	3300009090	Vadose Zone Soil	GLVPALALAEAPSDRVVREPAKMPALPVTLVWRAAARRQPALTRLAALLTAAGANVGARLARTPRSA*
Ga0114129_102627493	3300009147	Populus Rhizosphere	DRVVTTPARVPPLPVSLLWRPAARRQPALARLAELLAAAGARVGARLVRARRR*
Ga0114129_121091162	3300009147	Populus Rhizosphere	TLVWRAAARRPPALTRLATLLAAAGTRVGARLGRPARAG*
Ga0105241_122265241	3300009174	Corn Rhizosphere	APADRVVSEPARVPALPVTLVWRPTARRQPALARLADRLAAAGARAGAKLAKAR*
Ga0126374_107021412	3300009792	Tropical Forest Soil	LVVREAARMPALPVTLVWRTAARRPPALTRLAALLATAGTRVGARLRRPARG*
Ga0126374_111818481	3300009792	Tropical Forest Soil	TPARVPPLPVALIWRPAARRQPALARLAELLAAAGARVGARLVRARRR*
Ga0126374_114300242	3300009792	Tropical Forest Soil	GLVPALALAEAPAGRVVTEPARVPALPVALVWRAGARRHPALTRLADLLAAAGKRAGARIRGAKGVMP*
Ga0105063_10182463	3300009804	Groundwater Sand	PALPVTLVWRPAARRQPALARLAALLVTAGARVGARLSRGRRDR*
Ga0105063_10711182	3300009804	Groundwater Sand	LAESPAERVVTTPARVPALPVTLVWRPAARRPPALTRLAELLAAAGARVGARLVRARRR*
Ga0105076_10316961	3300009816	Groundwater Sand	IGLVPALALAEAPTDRVVSAPAKVPALPVTLVWRPAARRQPALARLAALLVTAGARVGARLSRGKRDR*
Ga0105064_11054821	3300009821	Groundwater Sand	LAEAPTDRVVSAPAKVPALPVTLVWRPAARRQPALARLAALLVTAGARVGARLSRGKRDR
Ga0105058_10670811	3300009837	Groundwater Sand	LAEAPADRVVSAPARVPALPVTLVWRPAARRQPALARLAALLVTAGARVGARLSRGRRDR
Ga0126380_114745201	3300010043	Tropical Forest Soil	RVVSEPARLPALPVSLVWRAAVRRPPALAHLADLLAAAGKRAGARIRGAKEA*
Ga0126380_116315042	3300010043	Tropical Forest Soil	VVLEAARMPALPVTLVWRTAARRPPALTRLATLLAVAGTRVGARLGRPARG*
Ga0126382_100349471	3300010047	Tropical Forest Soil	IGLVPALALAEAPKDRVVSAPARVPALPVTLVWRTAARRQPALARLADLLATAGARVGARLGRHVQRPRV*
Ga0126372_130422552	3300010360	Tropical Forest Soil	VREAARMPALPVTLVWRTAARRPPALTRLAALLATAGTRVGARLRRPARG*
Ga0126378_105461651	3300010361	Tropical Forest Soil	LALAEAPADRVVSEPARVPALPVSLIWRPAARRPPALARLAALLAVAGIRAGSRLGSGSRRRSAGAGVGR*
Ga0126378_111427012	3300010361	Tropical Forest Soil	APADRIVSAPARVPALPVALIWRPTARRQPTLARLASLLAAAGARAGARLVRRRR*
Ga0126379_105440451	3300010366	Tropical Forest Soil	LVWRTAARRPPALTRLADLLTAAGARVGARLSRQRTA*
Ga0136847_101495804	3300010391	Freshwater Sediment	MPALPVTLVWRAAARRQPALTRLASLLTAAGARVSARLARTRRSV*
Ga0136847_117175052	3300010391	Freshwater Sediment	VTDVAVPALPVTLVWRAAVRRQPALTCLAALLTASGARVGARLARPPRG*
Ga0126383_109433671	3300010398	Tropical Forest Soil	RMPALPVTLVWRAAARRPPALTRLATLLAEAGTRVGAKLGRPARG*
Ga0134122_119385442	3300010400	Terrestrial Soil	QVVREPARMPALPVTLVWRAAARRQPALTRLATLLTAAGARVGAKLARPARG*
Ga0134121_114216482	3300010401	Terrestrial Soil	APRDRIVREPARVPALPVALLWRASTRRQPALDRLASLLAAAGARAGARLARQRA*
Ga0137391_103268323	3300011270	Vadose Zone Soil	SAPARVPALPVTLVWRPAARRQPALARLAALLVTAGARVGARLSRGRRDR*
Ga0137433_10571563	3300011440	Soil	PALPVALVWRAAARRQPALTRLATLLAAAGVRAGVKLARARRAPRR*
Ga0137383_101139704	3300012199	Vadose Zone Soil	ALAEAPSDRVVSEPAKMPALPVTLVWRAAARRQPALTRLAALLTAAGARVGARLRKN*
Ga0137399_103101254	3300012203	Vadose Zone Soil	GLVPALALVEAPSDRVVREPAKMPALPVTLVWRAAARRQPALTRLAALLTAAGARVGAKLKKN*
Ga0137380_115681922	3300012206	Vadose Zone Soil	AEAPAGLVVREPARMPALPVTLVWRAAARRQPALTRLATLLSAAGARVGARLARPVRG*
Ga0137381_103908431	3300012207	Vadose Zone Soil	DRVVSTPARVPALPVTLVWRTAARRQPALARLADLLATAGARMGARLARTRRPERPHV*
Ga0137377_107315831	3300012211	Vadose Zone Soil	ADRVVSAPARVPALPVTLVWRTAARRQPALARLADLLATAGARVGARLTRARRST*
Ga0137372_103566841	3300012350	Vadose Zone Soil	LALVEAPRDRVVSARARVPALPVTLIWRPAARRQPALARLVDLLTVAGARAGARLRTSTAK*
Ga0137367_104993461	3300012353	Vadose Zone Soil	VSAPARVPALPVTLVWRPAVRRQPALARLAALLVTAGARVGARLSRGRRDR*
Ga0137369_104980582	3300012355	Vadose Zone Soil	GLGIGLVPALALAEAPTDRVVSAPARVPALPVTLVWRPATRRQPALARLAALLVTAGARVGARLSRGRRSR*
Ga0137384_104318354	3300012357	Vadose Zone Soil	MPALPVTLVWRAAARRQPALTRLAALLTAAGARVGARLKKN*
Ga0137368_105790421	3300012358	Vadose Zone Soil	LVEAPRDRVVSARARVPALPVTLIWRPAARRQPALARLVDLLTVAGARAGARLRTSTAK*
Ga0137360_110890511	3300012361	Vadose Zone Soil	PALALAEAPTDRVVSAPARVPVLPVTLVWRPAARRQPALARLAALLVTAGARVGARLSRGRRDR*
Ga0157322_10405292	3300012490	Arabidopsis Rhizosphere	RPAARRQPALARLAELLAAAGARVGARLVRARRR*
Ga0137358_102989651	3300012582	Vadose Zone Soil	TLVWRTAARRQPALARLADLLATAGARVGARLTRARRRT*
Ga0137396_108830632	3300012918	Vadose Zone Soil	VPALALAEAPSDRVVHEPAKMPALPVTLVWRAAARRQPALTRLAALLTAAGARVGARLKKN*
Ga0137394_110206381	3300012922	Vadose Zone Soil	ALPVALMWRATARRQPTLARLASLLATAGARAGAGLARRRS*
Ga0153915_113600623	3300012931	Freshwater Wetlands	SDRVVSEPAQMPALPVTLVWRAAARRQPALTRLAALLSAAGARVGARLAHTRRGA*
Ga0137410_109486241	3300012944	Vadose Zone Soil	RVVSAPARVPALPVTLVWRAAARRQPALARLAQLLATAGAHAGARLVRARRQTPGHSMR*
Ga0126375_112471302	3300012948	Tropical Forest Soil	TPARVPPLPVSLLWRPTARRQPALARLAELLAAAGARVGARLVRARRR*
Ga0126369_104930121	3300012971	Tropical Forest Soil	LVWRTAARRPPALTRFAALLAAAGTRVGARLGRPARG*
Ga0126369_106988201	3300012971	Tropical Forest Soil	ESLADRVVTTPARVPPLPVALIWRPAARRQPALARLAELLAAAGARVGARLVRARRR*
Ga0157371_111385152	3300013102	Corn Rhizosphere	VVKEPARVPALPVALVWRAAARRQPALTRLADLLAVAGKRAAARLGA*
Ga0163162_123730862	3300013306	Switchgrass Rhizosphere	IGLVPALALVESLPDRVVTTPARVPPLPVSLLWRPAARRQPALARLAELLAAAGARVGARLVRARRR*
Ga0157375_113199732	3300013308	Miscanthus Rhizosphere	VPALPVALLWRASARRQPALARLAALLATAGARAGARLARRHG*
Ga0134075_101778293	3300014154	Grasslands Soil	PVTLVWRPAARRQPALARLAALLVTAGTRVGARLSRGRRDR*
Ga0134075_105373002	3300014154	Grasslands Soil	ALALAEGTSKRVVREPARMPALPVTLVWRAAARRQPALTRLAALLIAAGGRVGAKLARPSRG*
Ga0180095_11123491	3300014871	Soil	VSAPAGVPALPVTLVWRPAAHRQPALARLAALLATAGARAGARLARLRRTP*
Ga0180094_11296092	3300014881	Soil	VSEPARVPALPVTLVWRPAARRQPALARLAALLATAGARAGTRLARARWR*
Ga0180086_11979731	3300014883	Soil	RVPALPVTLVWRPAARRLPALARLADLLATAGARAGAKLARARRRG*
Ga0180085_10291374	3300015259	Soil	VPALALVEAPSDRVVREPAKMPRLPVTLVWRAAARRQPALTRLAALLTAAGARVGARLKKN*
Ga0132258_116941023	3300015371	Arabidopsis Rhizosphere	LALREARRDGIVTEPARVPPLPVNLVWRPAAHRQPAMARLVALLAAAGARVGARL*
Ga0132256_1003491311	3300015372	Arabidopsis Rhizosphere	IVTEPARVPPLPVNLVWRPAAHRQPAMARLVALLAAAGARVGARL*
Ga0132256_1005186953	3300015372	Arabidopsis Rhizosphere	TAPARVPALPVVLMWRSAARRQPALARLASLLAVAGARVGSRLSRRPG*
Ga0132255_1041890661	3300015374	Arabidopsis Rhizosphere	VVSAPASVPALPVALLWRASARRQPALTRLASLLATAGARAGARLARRRG*
Ga0184610_10021551	3300017997	Groundwater Sediment	RVVSAPARVAALPVTLVWRPAARRQPALTRLAALLVTAGARVGARLARGRRLERAPV
Ga0187788_101763081	3300018032	Tropical Peatland	VTAPASVPALPVALLWRASARRQPALTRLASLLATAGARVGERLARRRG
Ga0184637_100145075	3300018063	Groundwater Sediment	VTDVAVPALPVPLVWRAAARRQPALTRLADLLTAAGARVGARLARPPRG
Ga0184637_101876331	3300018063	Groundwater Sediment	SAPARVPALPVTLVWRPAARRQPALTRLAALLVTAGARVGARLGRARRLVQSPV
Ga0184627_100383133	3300018079	Groundwater Sediment	VTDVAVPALPVTLVWRAAVRRQPALTRLAALLTAAGARVGARLARPPRG
Ga0187774_110942062	3300018089	Tropical Peatland	AASVPALPVALLWRASARRQPALTRLASLLATAGARVGARLARRRG
Ga0190265_136665152	3300018422	Soil	DRVVSAPAHVPPLPVTLVWRPAARRHPALLRLADLLASAGARAGAKLARAALTRRGR
Ga0066655_112107812	3300018431	Grasslands Soil	ADRVVSVPARVPALPVTLVWRTAARRQPALARLADLLATAGARVGARLTRARRRT
Ga0194121_100012491	3300020200	Freshwater Lake	PVTLVWRPAARRQPALARLADLLGSAGARAGARLARMR
Ga0196973_11372351	3300021061	Soil	ADRVVSAPARVPALPVSLLWRATARRQPALARLIALLGTAGARIGARLAQARR
Ga0222623_101697641	3300022694	Groundwater Sediment	VVSAPARVPALPVTLVWRPAARRQPALARLAALLATAGARVGARLARGRRLEAPPV
Ga0210073_11120131	3300025569	Natural And Restored Wetlands	GLGIGLVPALALVEAPSDRVVREPAKMPALPVTLVWRAAARRQPALTRLAALLTSAGARVSARLARTRRSD
Ga0210073_11253652	3300025569	Natural And Restored Wetlands	MPALPVTLVWRAAARRQPALTRLAALLTAAGARVSARLKKN
Ga0207646_109316402	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	PALALVEAPRDRVVSARARVPALPVTLIWRPAARRQPALARLVDLLTVAGARAGARLRTSTAK
Ga0207646_116387802	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LPALPVTLVWRPAARRQPALTRLAALLAAAGSRAGARLARARRR
Ga0207687_109756662	3300025927	Miscanthus Rhizosphere	TLVWRAAARRPPALTRLASLLAAAGARAGARLARGPRARGR
Ga0207701_103956952	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VVTTPARVPPLPVSLLWRSAARRQPALARLAELLAAAGARVGARLVRARRR
Ga0207701_104684404	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	PADRVVSAPARVPALPVALVWRAAARRPPALGRLTALLVAAGARVGARLQRNGTLRSHRS
Ga0207712_103855983	3300025961	Switchgrass Rhizosphere	ALPVTLVWRAAARRPPALTRLASLLAAAGARAGARLARGRRARGR
Ga0209154_11626491	3300026317	Soil	ADRIVTAPARMPALPVALIWRPSARRQPALARLATLLANAGARIGARLVGPRRQRQRG
Ga0209159_11049091	3300026343	Soil	REPARMPALPVTLVWRAAARRQPALTRLATLLIAAAARVGAKLARPPRG
Ga0257171_10952952	3300026377	Soil	VTLVWRPAARRQPALARLAALLVTAGARVGARLSRGRRDR
Ga0209376_10234011	3300026540	Soil	GLVPALALAEAQADRIVTAPARMPALPVALIWRPSARRQPALARLATLLADAGARIGARLVGPRRQRQRG
Ga0209799_10560511	3300027654	Tropical Forest Soil	TLVWRAAARRPPALTRLAALLTTAGTRVGARLGRPARG
Ga0209177_102766972	3300027775	Agricultural Soil	PRGRIVREPARVPALPVALLWRASTRRQPALTRLASLLAAAGARVGARLAR
Ga0209814_103497642	3300027873	Populus Rhizosphere	IVTTPARVPALPVVLMWRSAARRQPALARLASLLAQAGARVGSRLSRRPS
Ga0209382_100822234	3300027909	Populus Rhizosphere	APADRVVSEPARVPALPVTLVWRPTARRQPALARLADRLAVAGARAGVKLATAR
Ga0209382_115623081	3300027909	Populus Rhizosphere	LPVALVWRAAARRPPALTRLADLLAAAGARLARAAGVSVRRH
Ga0247819_102759962	3300028608	Soil	GWTARVPALPVALVWRAAARRPPALGRLTALLVAAGARVGARLRGGGPRGRRSA
Ga0318534_100078391	3300031544	Soil	VREAARMPALPVTLVWRTAARRPPALTRFAALLAAAGTRVGARLGRPARG
Ga0318574_100108631	3300031680	Soil	PVTLVWRTAARRPPALTRFAALLAAAGTRVGARLGRPARG
Ga0310813_110746651	3300031716	Soil	GLVPALALREARRDGIVTEPARVPPLPVNLVWRPAAHRQPAMARLVALLAAAGARVGARL
Ga0307469_100336361	3300031720	Hardwood Forest Soil	RMPALPVTLVWRAAARRQPALTRLATLLTAAGARVGAKLARPARG
Ga0307469_102914402	3300031720	Hardwood Forest Soil	VALIWRPAARRQPALARLAELLAAAGTRVGARLVRARRR
Ga0307469_104437011	3300031720	Hardwood Forest Soil	VLVWRPAARRQPALARLAELLAAAGARVGARLVRARRR
Ga0307469_105235091	3300031720	Hardwood Forest Soil	APVPPLPVALVWRPAARRQPALARLAELLAAAGARVGARLVRARRR
Ga0307469_106820641	3300031720	Hardwood Forest Soil	LALAEAPSDRVVREPAKMPALPVTLVWRAAARRQPALTRLAALLSAAGERVGARLARARRGG
Ga0307468_1004057771	3300031740	Hardwood Forest Soil	LWRPAARRQPALARLAELLAAAGARVGARLVRARRR
Ga0307468_1015384071	3300031740	Hardwood Forest Soil	LAEAPSDRVVREPAKMPALPVTLVWRAAARRQPALTRLAALLSAAGERVGARLARARRGG
Ga0307468_1021188821	3300031740	Hardwood Forest Soil	SERARVPALPVALVWRPAVRRPPALTRLAELLARAGARAGARLARGRSERARVGR
Ga0307468_1022720391	3300031740	Hardwood Forest Soil	PARVPALPVALMWRATARRQPTLARLASLLATAGARVGARLARRRR
Ga0318526_103571221	3300031769	Soil	REAARMPALPVTLVWRTAARRPPALTRFAALLAAAGTRVGARLGRPARG
Ga0310893_101523322	3300031892	Soil	ADRVVSERARVPALPVALIWRPAARRQPALARLAALLATAGARVGARLARGRRPEPRTV
Ga0214473_108616991	3300031949	Soil	AEAPADRVVSTPARVPALPVTLVWRPAARRPPALARLAALLATAGARVGARLARRFGA
Ga0318558_106312842	3300032044	Soil	LVWRTAARRPPALTRFAALLAAAGTRVGARLGRPARG
Ga0307471_1040506122	3300032180	Hardwood Forest Soil	PALALSEASTDRIVSEPARVPTLPVTLVWRSAAHRQPALARLATLLATAGARAGTRLARLRRAP
Ga0307472_1007069411	3300032205	Hardwood Forest Soil	LVPALALAEAPSDRVVREPAKMPALPVTLVWRAAARRQPALTRLAALLAAAGERVGARLARARRGG
Ga0335085_106908281	3300032770	Soil	PVALLWRPAARRPPALARLADLLARAGARAGARLARSGARAGV
Ga0335069_103178854	3300032893	Soil	ASSDRVVREPAKMPALPVTLVWRAAARRQPALTRLAALLTTAGVRVSAKLKKN
Ga0335084_102831372	3300033004	Soil	IGLVPALALAEAPPGRVVREPAQMPALPVTLVWRAMARRPPALTRLASLLTAAGARVAATLSRQSGR
Ga0335077_118672581	3300033158	Soil	ALALAEAPADRIVSAPARVPALPVTLIWRPAARRQPTLARVTALLAAAGIRAGTRLSRRARS
Ga0318519_102405982	3300033290	Soil	ARMPALPVTLVWRTAARRPPALTRFAALLAAAGTRVGARLGRPARG
Ga0314866_065734_497_613	3300033807	Peatland	SLVWRAAARRPPALTRLANLLTAAGARVGARLSRRRRA
Ga0364924_092377_560_679	3300033811	Sediment	TLVWRPAARRQPALARLAALLVTAGARVGARLSRGRRSR
Ga0326723_0454926_398_583	3300034090	Peat Soil	DRVVSEPARVPALPVTLIWRPAARRQPALARLAALLATAGARVGARLARRRRPPGVSNPG
Ga0364929_0085466_1_120	3300034149	Sediment	VVLVWRPAARRQPALARLAELLAAAGARVGARLVRARRR
Ga0364942_0234504_3_194	3300034165	Sediment	DRIVSTPARVPALPVTLVWRPAARRQPALARLAALLVTAGARAGARLARPRRNPRSASWTKVQ
Ga0364941_019781_1218_1358	3300034417	Sediment	AGVPPLPVVLVWRPAARRQPALARLAELLAAAGARVGARLVRARRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F040545

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences