Metagenome / Metatranscriptome Family F040752

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040752
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	58 residues
Representative Sequence	MMDELAIEELSVRATQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA
Number of Associated Samples	100
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.79 %
% of genes near scaffold ends (potentially truncated)	20.50 %
% of genes from short scaffolds (< 2000 bps)	81.99 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.323 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.360 % of family members)
Environment Ontology (ENVO)	Unclassified (21.118 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.913 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.29% β-sheet: 4.76% Coil/Unstructured: 55.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF13436	Gly-zipper_OmpA	1.86
PF00072	Response_reg	1.24
PF13432	TPR_16	1.24
PF00990	GGDEF	1.24
PF13505	OMP_b-brl	1.24
PF12697	Abhydrolase_6	1.24
PF01370	Epimerase	1.24
PF13561	adh_short_C2	0.62
PF01734	Patatin	0.62
PF14295	PAN_4	0.62
PF06627	DUF1153	0.62
PF00578	AhpC-TSA	0.62
PF01656	CbiA	0.62
PF13586	DDE_Tnp_1_2	0.62
PF00805	Pentapeptide	0.62
PF00765	Autoind_synth	0.62
PF13701	DDE_Tnp_1_4	0.62
PF00982	Glyco_transf_20	0.62
PF02586	SRAP	0.62
PF13467	RHH_4	0.62
PF13629	T2SS-T3SS_pil_N	0.62
PF02738	MoCoBD_1	0.62
PF09939	DUF2171	0.62
PF00487	FA_desaturase	0.62
PF13340	DUF4096	0.62
PF01068	DNA_ligase_A_M	0.62
PF01527	HTH_Tnp_1	0.62
PF05118	Asp_Arg_Hydrox	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG3916	N-acyl-homoserine lactone synthase LasI (autoinducer biosynthesis)	Signal transduction mechanisms [T]	1.24
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.62
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.62
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.62
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.62
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.62
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.62
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.62
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.62
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.62
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
All Organisms	root	All Organisms	31.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
cellular organisms	root	All Organisms → cellular organisms	31.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.24 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.24 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.11 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.24 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.11 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.24 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.24 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.11 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.24 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.24 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.11 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	1.24 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.24 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.62 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.11 %
Hyphomicrobium sp. NDB2Meth4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. NDB2Meth4	1.24 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.24 %
Sinorhizobium fredii group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group	0.62 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.11 %
Hyphomicrobium sp. NDB2Meth4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. NDB2Meth4	1.24 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.24 %
Sinorhizobium fredii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group → Sinorhizobium fredii	0.62 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.62 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig88066	Not Available	645	Open in IMG/M
2170459003\|FZ032L002I6XE7	Not Available	504	Open in IMG/M
2170459003\|FZN2CUW02FQSGQ	Not Available	500	Open in IMG/M
3300001471\|JGI12712J15308_10024100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1585	Open in IMG/M
3300001867\|JGI12627J18819_10102829	Not Available	1180	Open in IMG/M
3300001867\|JGI12627J18819_10402559	Not Available	557	Open in IMG/M
3300002245\|JGIcombinedJ26739_100007268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8733	Open in IMG/M
3300002245\|JGIcombinedJ26739_100695920	Not Available	894	Open in IMG/M
3300002245\|JGIcombinedJ26739_101453771	Not Available	580	Open in IMG/M
3300003505\|JGIcombinedJ51221_10016153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. NDB2Meth4	2544	Open in IMG/M
3300003505\|JGIcombinedJ51221_10057593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1491	Open in IMG/M
3300004092\|Ga0062389_102542512	Not Available	680	Open in IMG/M
3300005332\|Ga0066388_101357298	All Organisms → cellular organisms → Bacteria → Proteobacteria	1231	Open in IMG/M
3300005434\|Ga0070709_11810644	Not Available	500	Open in IMG/M
3300005544\|Ga0070686_101802184	Not Available	521	Open in IMG/M
3300005764\|Ga0066903_108456650	Not Available	525	Open in IMG/M
3300005921\|Ga0070766_10325005	Not Available	993	Open in IMG/M
3300005921\|Ga0070766_10694138	Not Available	689	Open in IMG/M
3300005921\|Ga0070766_11113496	Not Available	545	Open in IMG/M
3300006028\|Ga0070717_11657024	Not Available	579	Open in IMG/M
3300006057\|Ga0075026_101007054	Not Available	518	Open in IMG/M
3300006059\|Ga0075017_100128487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1788	Open in IMG/M
3300006059\|Ga0075017_100376878	Not Available	1061	Open in IMG/M
3300006059\|Ga0075017_100407412	Not Available	1021	Open in IMG/M
3300006059\|Ga0075017_100688676	Not Available	786	Open in IMG/M
3300006175\|Ga0070712_101722120	Not Available	549	Open in IMG/M
3300006176\|Ga0070765_100148582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2087	Open in IMG/M
3300006893\|Ga0073928_10080467	Not Available	2790	Open in IMG/M
3300006893\|Ga0073928_10194281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1595	Open in IMG/M
3300006893\|Ga0073928_10227838	Not Available	1440	Open in IMG/M
3300006904\|Ga0075424_102450646	Not Available	547	Open in IMG/M
3300009148\|Ga0105243_12043978	Not Available	608	Open in IMG/M
3300009521\|Ga0116222_1072674	Not Available	1486	Open in IMG/M
3300009521\|Ga0116222_1182359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	904	Open in IMG/M
3300009522\|Ga0116218_1042152	Not Available	2064	Open in IMG/M
3300009522\|Ga0116218_1202801	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300009522\|Ga0116218_1227095	Not Available	840	Open in IMG/M
3300009522\|Ga0116218_1517337	Not Available	532	Open in IMG/M
3300009525\|Ga0116220_10246285	Not Available	780	Open in IMG/M
3300009552\|Ga0116138_1094730	Not Available	830	Open in IMG/M
3300009553\|Ga0105249_11625479	Not Available	719	Open in IMG/M
3300009683\|Ga0116224_10114060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1308	Open in IMG/M
3300009700\|Ga0116217_10543554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	727	Open in IMG/M
3300009700\|Ga0116217_10642243	Not Available	659	Open in IMG/M
3300009764\|Ga0116134_1149295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	826	Open in IMG/M
3300009824\|Ga0116219_10117117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1551	Open in IMG/M
3300010371\|Ga0134125_11157319	Not Available	846	Open in IMG/M
3300010373\|Ga0134128_10583261	Not Available	1245	Open in IMG/M
3300010379\|Ga0136449_100009045	All Organisms → cellular organisms → Bacteria	27979	Open in IMG/M
3300010379\|Ga0136449_100188880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3946	Open in IMG/M
3300010379\|Ga0136449_100471554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2193	Open in IMG/M
3300010379\|Ga0136449_101078296	Not Available	1282	Open in IMG/M
3300010379\|Ga0136449_101227294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1177	Open in IMG/M
3300010396\|Ga0134126_11680886	Not Available	697	Open in IMG/M
3300012181\|Ga0153922_1070076	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	783	Open in IMG/M
3300012951\|Ga0164300_10046696	Not Available	1689	Open in IMG/M
3300012951\|Ga0164300_10092017	Not Available	1311	Open in IMG/M
3300012957\|Ga0164303_10152683	Not Available	1224	Open in IMG/M
3300012958\|Ga0164299_10125895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. NDB2Meth4	1378	Open in IMG/M
3300012958\|Ga0164299_10169685	Not Available	1229	Open in IMG/M
3300012960\|Ga0164301_10062896	Not Available	1974	Open in IMG/M
3300012960\|Ga0164301_10363914	Not Available	999	Open in IMG/M
3300012961\|Ga0164302_11911932	Not Available	505	Open in IMG/M
3300012989\|Ga0164305_10298203	Not Available	1189	Open in IMG/M
3300014325\|Ga0163163_10870870	Not Available	964	Open in IMG/M
3300014657\|Ga0181522_10584872	Not Available	677	Open in IMG/M
3300015371\|Ga0132258_10583832	Not Available	2804	Open in IMG/M
3300015371\|Ga0132258_11193339	Not Available	1924	Open in IMG/M
3300015372\|Ga0132256_100482106	Not Available	1350	Open in IMG/M
3300016445\|Ga0182038_10508831	Not Available	1028	Open in IMG/M
3300017823\|Ga0187818_10371114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300017935\|Ga0187848_10449145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300017943\|Ga0187819_10602021	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300017943\|Ga0187819_10638362	Not Available	602	Open in IMG/M
3300017943\|Ga0187819_10747664	Not Available	550	Open in IMG/M
3300017955\|Ga0187817_10521837	Not Available	758	Open in IMG/M
3300017955\|Ga0187817_10623292	Not Available	688	Open in IMG/M
3300017959\|Ga0187779_10290858	Not Available	1043	Open in IMG/M
3300017961\|Ga0187778_10824960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300017970\|Ga0187783_10007371	All Organisms → cellular organisms → Bacteria → Proteobacteria	8073	Open in IMG/M
3300017970\|Ga0187783_10522157	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300017973\|Ga0187780_10618309	Not Available	778	Open in IMG/M
3300017973\|Ga0187780_10709537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300017974\|Ga0187777_10776172	Not Available	683	Open in IMG/M
3300017995\|Ga0187816_10023812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2432	Open in IMG/M
3300018058\|Ga0187766_10597928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300018085\|Ga0187772_10957104	Not Available	624	Open in IMG/M
3300018086\|Ga0187769_10599154	Not Available	833	Open in IMG/M
3300018090\|Ga0187770_10936113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300020579\|Ga0210407_10456633	Not Available	999	Open in IMG/M
3300020582\|Ga0210395_10010901	All Organisms → cellular organisms → Bacteria → Proteobacteria	6763	Open in IMG/M
3300020582\|Ga0210395_10044998	Not Available	3231	Open in IMG/M
3300020582\|Ga0210395_10060329	All Organisms → cellular organisms → Bacteria	2782	Open in IMG/M
3300020582\|Ga0210395_10151600	Not Available	1730	Open in IMG/M
3300020582\|Ga0210395_10313905	Not Available	1179	Open in IMG/M
3300020582\|Ga0210395_10366172	Not Available	1084	Open in IMG/M
3300020582\|Ga0210395_10772188	Not Available	717	Open in IMG/M
3300020582\|Ga0210395_10967608	Not Available	631	Open in IMG/M
3300020583\|Ga0210401_10174571	Not Available	2004	Open in IMG/M
3300020583\|Ga0210401_10485804	Not Available	1098	Open in IMG/M
3300021088\|Ga0210404_10511367	Not Available	679	Open in IMG/M
3300021180\|Ga0210396_10316550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1380	Open in IMG/M
3300021180\|Ga0210396_10345196	Not Available	1313	Open in IMG/M
3300021180\|Ga0210396_11704693	Not Available	512	Open in IMG/M
3300021401\|Ga0210393_10186383	Not Available	1675	Open in IMG/M
3300021401\|Ga0210393_11383031	Not Available	563	Open in IMG/M
3300021402\|Ga0210385_10254671	Not Available	1291	Open in IMG/M
3300021403\|Ga0210397_10928014	Not Available	674	Open in IMG/M
3300021404\|Ga0210389_10134539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1914	Open in IMG/M
3300021405\|Ga0210387_10933318	Not Available	762	Open in IMG/M
3300021406\|Ga0210386_10078596	Not Available	2669	Open in IMG/M
3300021406\|Ga0210386_10257898	Not Available	1488	Open in IMG/M
3300021406\|Ga0210386_10275070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1440	Open in IMG/M
3300021407\|Ga0210383_10037259	All Organisms → cellular organisms → Bacteria → Proteobacteria	4058	Open in IMG/M
3300021420\|Ga0210394_11432889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300021432\|Ga0210384_10537316	Not Available	1052	Open in IMG/M
3300021474\|Ga0210390_10389546	Not Available	1178	Open in IMG/M
3300021474\|Ga0210390_11094479	Not Available	647	Open in IMG/M
3300021477\|Ga0210398_10235313	Not Available	1493	Open in IMG/M
3300021477\|Ga0210398_10436736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1067	Open in IMG/M
3300021479\|Ga0210410_10324234	Not Available	1381	Open in IMG/M
3300022531\|Ga0242660_1192999	Not Available	556	Open in IMG/M
3300022557\|Ga0212123_10076731	Not Available	2845	Open in IMG/M
3300022557\|Ga0212123_10394497	Not Available	930	Open in IMG/M
3300024227\|Ga0228598_1120745	Not Available	532	Open in IMG/M
3300024271\|Ga0224564_1046740	Not Available	839	Open in IMG/M
3300025898\|Ga0207692_10581667	Not Available	718	Open in IMG/M
3300025915\|Ga0207693_11206698	Not Available	570	Open in IMG/M
3300025933\|Ga0207706_10403165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1186	Open in IMG/M
3300027090\|Ga0208604_1003580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group → Sinorhizobium fredii	1455	Open in IMG/M
3300027172\|Ga0208098_1017875	Not Available	691	Open in IMG/M
3300027568\|Ga0208042_1064467	Not Available	932	Open in IMG/M
3300027619\|Ga0209330_1135074	Not Available	558	Open in IMG/M
3300027884\|Ga0209275_10309459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	878	Open in IMG/M
3300027895\|Ga0209624_10017979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4489	Open in IMG/M
3300027908\|Ga0209006_10515084	Not Available	996	Open in IMG/M
3300028047\|Ga0209526_10545958	Not Available	749	Open in IMG/M
3300028906\|Ga0308309_10208971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1613	Open in IMG/M
3300030707\|Ga0310038_10410024	Not Available	588	Open in IMG/M
3300031231\|Ga0170824_102555131	Not Available	520	Open in IMG/M
3300031708\|Ga0310686_100159896	Not Available	1407	Open in IMG/M
3300031708\|Ga0310686_100331611	Not Available	525	Open in IMG/M
3300031708\|Ga0310686_100727449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5680	Open in IMG/M
3300031708\|Ga0310686_103239706	Not Available	663	Open in IMG/M
3300031708\|Ga0310686_103766651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38860	Open in IMG/M
3300031708\|Ga0310686_109419068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1752	Open in IMG/M
3300031708\|Ga0310686_116072516	All Organisms → cellular organisms → Bacteria	2773	Open in IMG/M
3300031910\|Ga0306923_10826664	Not Available	1021	Open in IMG/M
3300032076\|Ga0306924_10521772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1351	Open in IMG/M
3300032160\|Ga0311301_10129647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4694	Open in IMG/M
3300032160\|Ga0311301_10359432	All Organisms → cellular organisms → Bacteria	2268	Open in IMG/M
3300032160\|Ga0311301_10766662	Not Available	1335	Open in IMG/M
3300032160\|Ga0311301_11556959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	809	Open in IMG/M
3300032160\|Ga0311301_12217657	Not Available	629	Open in IMG/M
3300032896\|Ga0335075_10785248	Not Available	896	Open in IMG/M
3300032896\|Ga0335075_11435768	Not Available	579	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.55%
Host-Associated	Host-Associated	6.83%
Engineered	Engineered	0.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.26%
Aquatic	Environmental → Aquatic	14.29%
Plants	Host-Associated → Plants	6.21%
Fungi	Host-Associated → Fungi	0.62%
Modeled	Engineered → Modeled	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.26%
Freshwater	Environmental → Aquatic → Freshwater	8.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.35%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.11%
Sediment	Environmental → Aquatic → Sediment	3.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.24%
Roots	Host-Associated → Plants → Roots	0.62%
Mycelium	Host-Associated → Fungi → Mycelium	0.62%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.80%
Loam	Environmental → Terrestrial → Soil → Loam	17.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.07%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.24%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.24%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.62%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.62%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.07%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.73%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.86%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.24%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.62%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.62%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.36%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.73%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.11%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.11%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.24%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.24%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.24%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.62%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.62%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.62%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0066.00005680	2166559005	Simulated	SKGMGMMEELHLEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA
E4A_04578620	2170459003	Grass Soil	MGELSMMDELAIEEMSIRAVQEKIDEAFRAAMQRAINAGEEHAATLVSKKPGTRNPKVV
E4A_12343940	2170459003	Grass Soil	LSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA
JGI12712J15308_100241001	3300001471	Forest Soil	MDELQLEELSIRRTQEKMDEAFCAAMQRAINGGTEHTLTVVSKQPGTRNPKSVIAA*
JGI12627J18819_101028292	3300001867	Forest Soil	MMDELQLEELSVRMTIVKMDDAFCEALERAIDAGTENSPTVVSKQPGARNPKHLPRR*
JGI12627J18819_104025592	3300001867	Forest Soil	MDELQLEELSIRRTQERMDEAFCAAMQKAIDAGTEHTLTVVSKQPGTRNPKSVIAA*
JGIcombinedJ26739_10000726815	3300002245	Forest Soil	MMDELVIEELAVRAIQEKMDDAFRAAMHRAINAGEEVTQTVVSKKPGTRNPKFVVA*
JGIcombinedJ26739_1006959202	3300002245	Forest Soil	MRDDELFSEEMSLRAVQEKMDEAFCAAMQRAIDAGDENTPTIVSKKPGTKNPMIVFV*
JGIcombinedJ26739_1014537712	3300002245	Forest Soil	MMDELQLEELSIRRTQEKMDEAFCAAMQRAINGGTEHTLTVVSKQPGTRNPKSVIAA*
JGIcombinedJ51221_100161532	3300003505	Forest Soil	MDDLHLEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA*
JGIcombinedJ51221_100575933	3300003505	Forest Soil	MVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKIISALW*
Ga0062389_1025425121	3300004092	Bog Forest Soil	AAPPRPLSMMDELVIEERAVRRRQEKMDDAFRAAMQRAINAGEENALTVVSKKPGARNPKMVLA*
Ga0066388_1013572982	3300005332	Tropical Forest Soil	MDELHLEEVSLRITVEKMDEAFRPAIHRAIVAGEEKIPTVVAKQPGTRNPKHIVTV*
Ga0070709_118106442	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TRSLFYRLAAMRDELVIEEMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA*
Ga0070686_1018021841	3300005544	Switchgrass Rhizosphere	MEELHLEELSLRMTQEKMDEAFRAAMQRAIDAGEENTPIVVSKKPGTRYPKSIIAT*
Ga0066903_1084566502	3300005764	Tropical Forest Soil	MMDELLIEELSVRAIQQKMDEAFRAAMQRAINAGEENTPTAVSKKPGTRNPKVVLG*
Ga0070766_103250052	3300005921	Soil	MRDELVIEKMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA*
Ga0070766_106941382	3300005921	Soil	MGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEENTPTVVSKKPGTRNPKSIIAT*
Ga0070766_111134961	3300005921	Soil	MDDLHLEELSLRMTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA*
Ga0070717_116570242	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTDELVIEEMSIRALLEKMDQAFCAAMQRAISLGEEKAATVVSKKPGTRNPKIVLA*
Ga0075026_1010070542	3300006057	Watersheds	MMDELQLEELSIRRTQERMDEAFCAAMQKAIDAGTEHTLTVVSKQPGTRNPKSVIAA*
Ga0075017_1001284872	3300006059	Watersheds	MDELHLEELSVRVTQEKMDDAFRAAMQKAIDAGEEKTPTVVSKKPGTRNPKSTLAA*
Ga0075017_1003768782	3300006059	Watersheds	MMDELVIEEMSIRAVQEKMDEAFRAAMQRAINAGEEHAATVVSKKPGTRNPRVVLS*
Ga0075017_1004074123	3300006059	Watersheds	MMTDELVIEEMSTRVTQEKMDDAFRAAMHRAIKAGEEIAPTVVSKMPGTRRPKVVLV*
Ga0075017_1006886761	3300006059	Watersheds	MLPRPSKGMGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGQEKTPTVVSKKPGTRNPKSIIAA*
Ga0070712_1017221202	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVSELAIEEVSVRAIHQKMDEASKVALQRAINAGEENSPTVVSKKPGTKSPKIISALL*
Ga0070765_1001485823	3300006176	Soil	MGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEEKTPTVVSKKPGTRNPKSIIAA*
Ga0073928_100804672	3300006893	Iron-Sulfur Acid Spring	MMDELVIEELTVRAVQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKVVLAEPGRNLSR*
Ga0073928_101942813	3300006893	Iron-Sulfur Acid Spring	IEELAMRAIKEKMDDAFRAAMQRAINAGEEVTQTVVSKKPGTRNPKFVVA*
Ga0073928_102278382	3300006893	Iron-Sulfur Acid Spring	VGLLHKADIAMDELLIEELSVRAIQEKMDVAFRAAMQRAINAGDENTPTVVSKKPGTRNPKVVLA*
Ga0075424_1024506461	3300006904	Populus Rhizosphere	MGELAMMDELVIEEMSIRAVLEKMDEAFCAAMQRAISVGEERASTVVSKKPGTRHPKVVLA*
Ga0105243_120439781	3300009148	Miscanthus Rhizosphere	MGTMEELHLEELSLRMTQEKMDEAFRAAMQRAIDAGEENTPTVVSKKPGTRYPKSIIAT*
Ga0116222_10726741	3300009521	Peatlands Soil	MMDELAIEEMSFRAIQEKMVDAFRAAMQRAINKGEKHAATASSKKPGTRYPKVILA*
Ga0116222_11823591	3300009521	Peatlands Soil	MMDKQAIEELSVRAIQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA*
Ga0116218_10421523	3300009522	Peatlands Soil	MGMMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGQEKTPNVVSKKPGTRNPKSIIAA*
Ga0116218_12028013	3300009522	Peatlands Soil	MDELHLEELSVRVTQEKMDDAFRAAMQKAIDAGEEKTPTVVSKKPGTRN
Ga0116218_12270952	3300009522	Peatlands Soil	MGELAMMDELVIEEMSIRAVQEKMDEAFRVAMQRAIKAGEEHAATVVSKKPGTRNPRVVSS*
Ga0116218_15173371	3300009522	Peatlands Soil	MMDELVIEEMSMRAVQEKMDEAFRAAMQRAINAGEEHAATVVSKKPGTRNPRIVSS*
Ga0116220_102462852	3300009525	Peatlands Soil	MGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGGEKTPTVVSKKPGTRNPKSVIAA*
Ga0116138_10947302	3300009552	Peatland	MMDELAIEELSVRATQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA*
Ga0105249_116254792	3300009553	Switchgrass Rhizosphere	MGTMEELHLEELSLRMTQEKMDEAFRAAMQRAIDAGEENTPIVVSKKPGTRYPKSIIAT*
Ga0116224_101140603	3300009683	Peatlands Soil	MMDELAIEEMSFRAIQEKMVDAFRAAMQRAINKGEKHAATASSKKPGTRYPKVVLA*
Ga0116217_105435541	3300009700	Peatlands Soil	EQGRETMDELHLEELSVRVTQEKMDDAFRAAMQKAIDAGEEKTPTVVSKKPGTRNPKSTLAA*
Ga0116217_106422432	3300009700	Peatlands Soil	GRETMDELHLEELSLRMTQEKMDDAFRTAMQRAIDAGQEKTPTVVSKKPGTRNPKSIIAA
Ga0116134_11492953	3300009764	Peatland	MMDKLAMEELSVRAIQEKMDEAFRVAMQRAINAGEENTPTVVSKKPGTRNPKFVLA*
Ga0116219_101171172	3300009824	Peatlands Soil	MMDKLAMEELSVRAIQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA*
Ga0134125_111573191	3300010371	Terrestrial Soil	MFAVRVRDGTMEELHLEELSLRMTQEKMDEAFRAAMQRAIDAGEENTPIVVSKKPGTRYPKSIIAT*
Ga0134128_105832613	3300010373	Terrestrial Soil	SLRMTQEKMDEAFRAAMQRAIDAGEENTPTVVSKKPGTRYPKSIIAT*
Ga0136449_10000904516	3300010379	Peatlands Soil	MMDELAIEEMSFRAIQEKMIDAFRAAMQRAINKGEKHAATASSKKPGTRYPKVILA*
Ga0136449_1001888802	3300010379	Peatlands Soil	MGELAMMDELVVEEMSIRAVQEKMDEAFRVAMQRAIKAGEEHAATVVSKKPGTRNPRVVSS*
Ga0136449_1004715542	3300010379	Peatlands Soil	MDELHLEELSVRVTQEKMDDAFRAAMQKAIDAGEEKAPTVVSKKPGTRNPKSTLAA*
Ga0136449_1010782962	3300010379	Peatlands Soil	MGMMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGQEKTPTVVSKKPGTRNPKSIIAA*
Ga0136449_1012272942	3300010379	Peatlands Soil	MGMMDELYIEEMSLRATQERMDEAFRAAMQRAIDAGAENTPTVVSKKPGTKNPKTVTAA*
Ga0134126_116808861	3300010396	Terrestrial Soil	MGTMDELHFEELSLRAAQEKMDDAFRTAMRRAIDAGEENTTTVVSKKPGTRYPKSIIAT*
Ga0153922_10700761	3300012181	Attine Ant Fungus Gardens	MMDELLIEELALRRLHEKMDDAFRAAMQKAINAGEETTPTVVSKKPGTRIPKIVSA*
Ga0164300_100466963	3300012951	Soil	MGPFSMVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKIISALW*
Ga0164300_100920171	3300012951	Soil	MRDELVIEEMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA*
Ga0164303_101526833	3300012957	Soil	LPDLKPRVDPSVDAARRGTMDDLHLEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA*
Ga0164299_101258952	3300012958	Soil	MDDLHFEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA*
Ga0164299_101696851	3300012958	Soil	MGPFSMVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKINAALW*
Ga0164301_100628962	3300012960	Soil	MGSRYRQGDAELVIEEMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA*
Ga0164301_103639141	3300012960	Soil	MVSELAVEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKIISALW*
Ga0164302_119119322	3300012961	Soil	MGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEENTPTVVSKKPGTRNPKSIIAA*
Ga0164305_102982033	3300012989	Soil	MVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKI
Ga0163163_108708702	3300014325	Switchgrass Rhizosphere	METIDELRFDELSLRMTQEKMDDAFRAAMQRAIDAGEEKTPIEVSKKPGTRNPKSIIAA*
Ga0181522_105848722	3300014657	Bog	MGTMDDIHLEELSVRMMLMKMDDAFCEALLRAIDAGVENAPTVTSKVPGTRNPKTLTAA*
Ga0157379_109321722	3300014968	Switchgrass Rhizosphere	MGTMEELHLEELSLRMTQEKMDDAFRTAMPRAIDAGEEKASAVVSKNP
Ga0132258_105838326	3300015371	Arabidopsis Rhizosphere	MDELHLDELSLPMTQEKMDEAFRTAMQRAIDAGEEKTPTVVSKKPGTRNPQRAVTT*
Ga0132258_111933394	3300015371	Arabidopsis Rhizosphere	MDEFHLDELSVRIMQEKMDYAFCTAMQRAIDAGEEQVPTVVSKQPGTRSPKSTITI*
Ga0132256_1004821063	3300015372	Arabidopsis Rhizosphere	VRVRVRDWETMDELHLDELSLRMTQEKMDEAFRTAMQRAIDAGEEKTPTVVSKKPGTRNPQRAVTT*
Ga0182038_105088312	3300016445	Soil	MTDEIAIEEVSLRAVQQKMDEAFRAAMARAISMGEENTLTVVSKKPNTRNPKVVVA
Ga0187818_103711141	3300017823	Freshwater Sediment	MMDELAIEELSVRATQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA
Ga0187848_104491452	3300017935	Peatland	MMDKQAIEELSVRAIQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA
Ga0187819_106020212	3300017943	Freshwater Sediment	MMDGAEIEEMSLRAVQEKMEEAFRVRLQKAINAGEEHAVTVVSKKPGMRNPKLVLS
Ga0187819_106383621	3300017943	Freshwater Sediment	MMDKLAIEELSVRAIQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA
Ga0187819_107476642	3300017943	Freshwater Sediment	MMDELVIEEMSIRAVQEKMDEAFRAAMQRAINAGEEHAATVVSKKPGTRNPRIVSS
Ga0187817_105218372	3300017955	Freshwater Sediment	MGMMDELYIEEMSLRATQERMDEAFRAAMQRAIDAGAENTPTVVSKKPGTKNPKIVTAA
Ga0187817_106232921	3300017955	Freshwater Sediment	MMDELAIEELSVRAIQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFVLA
Ga0187779_102908581	3300017959	Tropical Peatland	MVDELVLEEKSLRAMQQKMDNAFCAAMQRAINAGEENTPTDVSKKPGTKKPKIVFA
Ga0187778_108249602	3300017961	Tropical Peatland	LVDELVLEEKSLRAMQRKMDDAFCAAMQRAINAGEENTPTVVSKKPGTKKPKIVLAY
Ga0187783_100073714	3300017970	Tropical Peatland	MVDELVLEEKSLRAMQRKMDDAFCAAMQRAIKAGEENTPTVVSKKPGTKKPKVVFA
Ga0187783_105221571	3300017970	Tropical Peatland	MMDELVIEEKSLRALLEEMDEAFCAAMQRAISLGEERASTVVSKKPGTRNPKIVLA
Ga0187780_106183092	3300017973	Tropical Peatland	MVDELVLEEISLRAMQQKMDDAFRAAMQRAIRAGEENTPTVVSKKPGTKKPKIVFA
Ga0187780_107095372	3300017973	Tropical Peatland	LVLEEKSLRAMQRKMDDAFCAAMQRAINAGEENTPTVVSKKPGTKKPKIVLAY
Ga0187777_107761721	3300017974	Tropical Peatland	MRDELFIEEMSLRVAKERMDEAFRAAMQGAIDAGEENAPTVISKKPGTRNPKVVRLSM
Ga0187816_100238121	3300017995	Freshwater Sediment	MRDELVIEEMAVRAMQEKMDEAFRAAMERAISKGEEKTPTIVSKRPGTKNPRVVFA
Ga0187816_100358781	3300017995	Freshwater Sediment	MSFRAIQEKMVDAFRAAMQRAINAGKEQAATVVSKKPGTRKPKVVLA
Ga0187766_105979282	3300018058	Tropical Peatland	MVDELVLEEKSLRAMQRKMDDAFCAAMQRAINAGEENTPTVVSKKPGTKKPKIVLAY
Ga0187772_109571042	3300018085	Tropical Peatland	MMNELLIEELSARATQEKMDEAFRAAMQRAIDAGEENAPAAVSKKPGTRNPKVVLG
Ga0187769_105991542	3300018086	Tropical Peatland	LVDELVLEEKSLRAMQRKMDDAFCAAMQRAINAGEESTPTVVSKKPGTKKPKIVFA
Ga0187770_109361131	3300018090	Tropical Peatland	VDELVLEEKSLRAMQRKMDDAFCAAMQRAINAGEESTPTVVSKKPGTKKPKIVFA
Ga0210407_104566333	3300020579	Soil	MDDLHLEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA
Ga0210395_100109012	3300020582	Soil	MMDELLIEELALRRLHEKMDDAFRAAMQKAINAGEETTPTVVSKKPGTRIPKIVSA
Ga0210395_100449981	3300020582	Soil	TSSRLHLEELSVRMNIVKMDDAFCEALQRAIDAGRENAPTVASKQPGTRNPKTLTAA
Ga0210395_100603293	3300020582	Soil	MMDELQLEELSIRRTQEKLDEAFCAAMQGAINAGTEHTPTVVSKQPGTRNPKSVIAA
Ga0210395_101516002	3300020582	Soil	MDELQLEELSIRRTQERMDEAFCAAMQKAIDAGTEHTLTVVSKQPGTRNPKSVIAA
Ga0210395_103139053	3300020582	Soil	MVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKIISALW
Ga0210395_103661722	3300020582	Soil	MIMDELQLEELSIRRTQEKMDEAFCVAMQRAIDAGTEHTLTVVSKQPGRRCPPTI
Ga0210395_107721881	3300020582	Soil	MDDLHLEELSLRMTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA
Ga0210395_109676082	3300020582	Soil	MRDEMVIEELAVRAIQERMDEAFRTAMQRAVEAGQENTPTVISKKPGTKYPKVVFAV
Ga0210401_101745714	3300020583	Soil	MMDELHLEELSVRMNIVKMDDAFCEALQRAIDAGRENAPTVASKQPGIRNPKTLTAA
Ga0210401_104858041	3300020583	Soil	MMDELLIEELAVRRLHEKMDDAFRAAMQKAINAGEETTPTVVSKKPGTRIPKIVSA
Ga0210404_105113671	3300021088	Soil	MGSRYRQGDAELVIEEMVVCAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA
Ga0210396_103165503	3300021180	Soil	MMDELQLEELSIRRTQEKMDEAFCAAMQRAINGGTEHTLTVVSKQPGTRNPKSVIAA
Ga0210396_103451961	3300021180	Soil	MGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEENTPTVVSKKPGTRNPKSMIAT
Ga0210396_117046932	3300021180	Soil	MVRPTKWGMGTMAELHLEELSSRIVQEKMDDAFRIAMQRAIDAGEEKTPSVVSRKPGTRNPKSTITA
Ga0210393_101863831	3300021401	Soil	MVRPTKWGMGTMDELHLEELSSRIVQEKMDDAFRIAMQRAIDAGEEKTPSVVSRKPGTRNPKSTITA
Ga0210393_113830311	3300021401	Soil	MDELHLEELSVRVTQEKMDDAFRAAMQKAIDAGEEKTPTVVSKKPGTRNPKSTLAA
Ga0210385_102546712	3300021402	Soil	MMDELHLEELSVRMNIVKMDDAFCEALQRAIDAGRENAPTVASKQPGTRNPKTLTAA
Ga0210397_109280141	3300021403	Soil	TRSLFYRLAAMRDELVIEEMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA
Ga0210389_101345393	3300021404	Soil	MEELHLEELSLRMTQEKMDDAFRTAMQRAIDAVEENTPTVVSKKPGTRNPKSMIAT
Ga0210387_109167071	3300021405	Soil	MVRPTKWGMGTMDELHLEELSSRIVQEKMDDAFRIAMQRAIDAGEEKT
Ga0210387_109333182	3300021405	Soil	TTKVGMGTMDELHLEELSSRIVQEKMDDAFRIAMQRAIDAGEEKTPSVVSRKPGTRNPKSTITA
Ga0210386_100785967	3300021406	Soil	MDELQLEELSIRRTQEKMDEAFCVAMQRAIDAGTEHMLTVVSKQPGTSNPKSVIA
Ga0210386_102578983	3300021406	Soil	MGSRYRQGDAELVIEEMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA
Ga0210386_102750703	3300021406	Soil	MGPFSKVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKIISALW
Ga0210383_100372593	3300021407	Soil	MDELHLEELSSRIVQEKMDDAFRIAMQRAIDAGEEKTPSVVSRKPGTRNPKSTITA
Ga0210394_114328892	3300021420	Soil	MVSELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSK
Ga0210384_105373161	3300021432	Soil	QGVGTMEELLLEELSLRMTQERMDDAFCAAVQRAIDAGEENTPTVVSKKPGTRNPKSIIA
Ga0210390_101799352	3300021474	Soil	MEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEENTPTVVSRSPAP
Ga0210390_103895463	3300021474	Soil	MMDELHREELSVRMMLVKMDDAFCEALQRAINAGTENVTTVVSKQPGTRNPKTLTAA
Ga0210390_110944791	3300021474	Soil	RLAAMRDELVIEEMVVRAIQERMDEGFRAAMQRAIDTGEENTSTVVSKKPGTKYP
Ga0210398_102353131	3300021477	Soil	MEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEENTPTVVSKKPGTRNPKSIIAT
Ga0210398_102727021	3300021477	Soil	MMDELLIEELALRRLHEKMDDAFRAAMQKAINAGEETTPTVVSKK
Ga0210398_104367361	3300021477	Soil	MDELQLEELSIRRTQEKLDEAFCAAMQGAINAGTEHTPTVVSKQPGTRNPKSVIAA
Ga0210410_103242341	3300021479	Soil	RVDPSVDAARRGTMDDLHLEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAA
Ga0242660_11929991	3300022531	Soil	SELAIEEVSVRAIHQKMDEAFKAALQRAINAGEENSPTVVSKKPGTKNPKIISALW
Ga0212123_100767315	3300022557	Iron-Sulfur Acid Spring	MMDELVIEELTVRAVQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKVVLAEPGRNLSR
Ga0212123_103944971	3300022557	Iron-Sulfur Acid Spring	VGLLHKADIAMDELLIEELSVRAIQEKMDVAFRAAMQRAINAGDENTPTVVSKKPGTRNPKVVLA
Ga0228598_11207451	3300024227	Rhizosphere	MMDELLIEELVVRRLHEKMDDAFRAAMQKAINAGEETTPTVVSKKPGTRIPKIVSA
Ga0224564_10467402	3300024271	Soil	MDELLTEELAVRRLQEKMDDAFRAAMQKAINAGEETTPTVVSKKPGTRIPKIVLA
Ga0207692_105816671	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MEELHLEELSLRMTQEKMDEAFRAAMQRAIDAGEENTPIVVSKKPGTRYPKSIIAT
Ga0207693_112066982	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRDELVIEKMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA
Ga0207706_104031653	3300025933	Corn Rhizosphere	MEELHLEELSLRMTQEKMDEAFRAAMQRAIDAGEENTPTVVSKKPGTRYPKSIIAT
Ga0208604_10035803	3300027090	Forest Soil	MGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEENTPTVVSKKP
Ga0208098_10178752	3300027172	Forest Soil	NSFSAILQYTGEMGSRYRQGDAELVIEEMVVRAIQERMDEAFRAAMQRAIDTGEENTPTVVSKKPGTKYPKAVVA
Ga0208042_10644671	3300027568	Peatlands Soil	MMDELAIEEMSFRAIQEKMVDAFRAAMQRAINKGEKHAATASSKKPGTRYPKVILA
Ga0209330_11350741	3300027619	Forest Soil	MMDELQLEELSIRRTQERMDEAFCAAMQKAIDAGTEHTLTVVSKQPGTRNPKSVIAA
Ga0209275_103094591	3300027884	Soil	MMDELQLEELSIRRTQEKMDEAFCAAMQGAINAGTEHTPTVVSKQPGTRNPKSVIAA
Ga0209624_100179795	3300027895	Forest Soil	MMDELVIEELAVRAIQEKMDDAFRAAMHRAINAGEEVTQTVVSKKPGTRNPKFVVA
Ga0209006_105150841	3300027908	Forest Soil	MRDDELFSEEMSLRAVQEKMDEAFCAAMQRAIDAGDENTPTIVSKKPGTKNPMIVFV
Ga0209526_105459581	3300028047	Forest Soil	MDDLHLEELSLRVTQEKMDDAFCAAMQRAIDAGAENTPTVVSKKPGTRNPKSVIAAQAWHSARNRPQQA
Ga0308309_102089713	3300028906	Soil	MLPRPSKGMGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGEEKTPTVVSKKPGTRNPKSIIAA
Ga0310038_104100242	3300030707	Peatlands Soil	MMDKQAIEELSVRAIQEKMDEAFRAAMQRAINAGEENTPTVVSKKPGTRNPKFV
Ga0170824_1025551311	3300031231	Forest Soil	MDELHLEELSVRVTQEKMDDAFRAAMQKAIDAGEEKTPTVVSKKPGTRNPKSTLAS
Ga0310686_1001598962	3300031708	Soil	MMDELLMEELVVRRLHEKMDDAFRAAMQKAINAGEETTPTVVSKKPGTRIPKIVLA
Ga0310686_1003316111	3300031708	Soil	MMDELVIEELAVRAIQEKMDDAFRAAMQRAINAGDENTPTVVSKKPGTRNPKVVLAEPGPNLSRSSGRRCPR
Ga0310686_1007274497	3300031708	Soil	MMDEVLIEELAVRRPHEKMDDAFRAAMQRAINAGEETTPTVVSKKPGTRIPKIVSA
Ga0310686_1032397061	3300031708	Soil	VKLLHKADIAMDELLIEELSVRAIQEKMDVAFRAAMQRAINAGDENTPTVVSKKPGTRNPKVVLA
Ga0310686_10376665138	3300031708	Soil	MMDELLIEELAVRRLQEKMDEAFRAAMQKAINAGEETTPTVVSKNPGT
Ga0310686_1094190682	3300031708	Soil	MRDDELFSEEMSLRAVQEKMDEAFCAAMQRAIDAGEENTPTVVSKKAGTKNPMIVFV
Ga0310686_1160725165	3300031708	Soil	MMDELQLEELSIRRNQEKMDEAFCAAMQGAINAGIEHTPTVVSRQPGTRSPKSVIAA
Ga0306923_108266643	3300031910	Soil	MTDEIAIEEVSLRAVQQKMDEAFRAAMARAISMGEENTPTVVSKKPGTRNPKVVVA
Ga0306924_105217723	3300032076	Soil	MTDEIAIEEVSLRAVQQKMDEAFRAAMTRAISMGEENTPTVVSKKPGTRNPKVVVA
Ga0311301_101296479	3300032160	Peatlands Soil	MMDELVIEEMSMRAVQEKMDEAFRAAMQRAINAGEEHAATVVSKKPGTRNPRIVSS
Ga0311301_103594322	3300032160	Peatlands Soil	MMDELVIEEMSIRAVQEKMDEAFRVAMQRAIKAGEEHAATVVSKKPGTRNPRVVSS
Ga0311301_107666621	3300032160	Peatlands Soil	GMGMMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGQEKTPTVVSKKPGTRNPKSIIAA
Ga0311301_115569592	3300032160	Peatlands Soil	MGMMDELYIEEMSLRATQERMDEAFRAAMQRAIDAGAENTPTVVSKKPGTKNPKTVTAA
Ga0311301_122176572	3300032160	Peatlands Soil	MLPRPSKGMGTMEELHLEELSLRMTQEKMDDAFRTAMQRAIDAGGEKTPTVVSKKPGTRNPKSVIAA
Ga0335075_107852482	3300032896	Soil	MDELHLEELSVRMNIVKMDDAFCEALQRAIDAGRENAPTVASKQPGTRNPKTLTAA
Ga0335075_114357681	3300032896	Soil	MMDELHLEELSVRMMLVRMDDAFCEALERAINAGTEMATVVSKQPGTRNPKTLAAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040752

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences