Metagenome / Metatranscriptome Family F040806

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040806
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	63 residues
Representative Sequence	MGRVPDEPEAEVEVEPKDCPRGHGPMRLRTRWANAQSHPGKKGSHAQPVTEWFCPRCGRTAPLD
Number of Associated Samples	121
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.50 %
% of genes near scaffold ends (potentially truncated)	32.92 %
% of genes from short scaffolds (< 2000 bps)	80.12 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.758 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.603 % of family members)
Environment Ontology (ENVO)	Unclassified (32.298 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.050 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 20.65% Coil/Unstructured: 79.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF00072	Response_reg	26.09
PF03795	YCII	18.01
PF05227	CHASE3	4.97
PF00188	CAP	1.86
PF01965	DJ-1_PfpI	1.86
PF09851	SHOCT	1.86
PF14518	Haem_oxygenas_2	1.24
PF07883	Cupin_2	1.24
PF00857	Isochorismatase	1.24
PF13365	Trypsin_2	1.24
PF00583	Acetyltransf_1	0.62
PF13248	zf-ribbon_3	0.62
PF13207	AAA_17	0.62
PF13302	Acetyltransf_3	0.62
PF01909	NTP_transf_2	0.62
PF11118	DUF2627	0.62
PF00160	Pro_isomerase	0.62
PF01594	AI-2E_transport	0.62
PF12773	DZR	0.62
PF04828	GFA	0.62
PF00300	His_Phos_1	0.62
PF00561	Abhydrolase_1	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	18.01
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	1.86
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.24
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.24
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.62
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.76 %
Unclassified	root	N/A	1.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.76 %
Unclassified	root	N/A	1.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.76 %
Unclassified	root	N/A	1.24 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.24 %
Unclassified	root	N/A	1.24 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	69.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.24 %
Unclassified	root	N/A	1.24 %

Name	Rank	Taxonomy	Distribution
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	42.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.24 %
Unclassified	root	N/A	1.24 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	42.86 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.24 %
Unclassified	root	N/A	1.24 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	42.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.24 %
Unclassified	root	N/A	1.24 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0845892	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1044342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300000955\|JGI1027J12803_102882151	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300000956\|JGI10216J12902_100149295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3517	Open in IMG/M
3300000956\|JGI10216J12902_104151811	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300000956\|JGI10216J12902_110946463	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300000956\|JGI10216J12902_111778951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3013	Open in IMG/M
3300001305\|C688J14111_10136789	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300001431\|F14TB_104261909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	559	Open in IMG/M
3300001537\|A2065W1_10283964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	3009	Open in IMG/M
3300001686\|C688J18823_10021241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4367	Open in IMG/M
3300002568\|C688J35102_120725798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1428	Open in IMG/M
3300002568\|C688J35102_120892861	All Organisms → cellular organisms → Bacteria	2075	Open in IMG/M
3300004081\|Ga0063454_100990224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	675	Open in IMG/M
3300004114\|Ga0062593_100224453	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300004114\|Ga0062593_100736510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	968	Open in IMG/M
3300004114\|Ga0062593_101218133	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300004114\|Ga0062593_101404954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	746	Open in IMG/M
3300004153\|Ga0063455_100172432	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300004153\|Ga0063455_100412723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	801	Open in IMG/M
3300004153\|Ga0063455_100571381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	727	Open in IMG/M
3300004463\|Ga0063356_100469440	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300004479\|Ga0062595_100010985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2985	Open in IMG/M
3300004479\|Ga0062595_100310895	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300004479\|Ga0062595_100901277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	745	Open in IMG/M
3300004479\|Ga0062595_101270853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
3300004479\|Ga0062595_101654912	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300004479\|Ga0062595_101662133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	599	Open in IMG/M
3300004480\|Ga0062592_100559591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	961	Open in IMG/M
3300004633\|Ga0066395_10381108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	790	Open in IMG/M
3300004643\|Ga0062591_100729765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	901	Open in IMG/M
3300005093\|Ga0062594_100660792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	933	Open in IMG/M
3300005167\|Ga0066672_10389240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	912	Open in IMG/M
3300005171\|Ga0066677_10684244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	575	Open in IMG/M
3300005172\|Ga0066683_10147339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1444	Open in IMG/M
3300005175\|Ga0066673_10102412	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300005177\|Ga0066690_10168838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1445	Open in IMG/M
3300005177\|Ga0066690_10270954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1142	Open in IMG/M
3300005178\|Ga0066688_10419751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300005179\|Ga0066684_10295863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1074	Open in IMG/M
3300005179\|Ga0066684_11023087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	532	Open in IMG/M
3300005179\|Ga0066684_11090982	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005332\|Ga0066388_100141370	All Organisms → cellular organisms → Bacteria	2972	Open in IMG/M
3300005332\|Ga0066388_102924666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	873	Open in IMG/M
3300005338\|Ga0068868_101752237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	586	Open in IMG/M
3300005435\|Ga0070714_100263967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1595	Open in IMG/M
3300005436\|Ga0070713_101594812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	633	Open in IMG/M
3300005437\|Ga0070710_10896014	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005446\|Ga0066686_11027693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	534	Open in IMG/M
3300005447\|Ga0066689_10340845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	934	Open in IMG/M
3300005451\|Ga0066681_10351228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	906	Open in IMG/M
3300005466\|Ga0070685_10287992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1102	Open in IMG/M
3300005467\|Ga0070706_100005687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11853	Open in IMG/M
3300005467\|Ga0070706_101442613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	630	Open in IMG/M
3300005467\|Ga0070706_101914813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300005518\|Ga0070699_100800542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	862	Open in IMG/M
3300005526\|Ga0073909_10234353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	809	Open in IMG/M
3300005540\|Ga0066697_10569666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300005540\|Ga0066697_10675923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	566	Open in IMG/M
3300005558\|Ga0066698_10366647	All Organisms → cellular organisms → Bacteria → Proteobacteria	994	Open in IMG/M
3300005559\|Ga0066700_10245575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1250	Open in IMG/M
3300005559\|Ga0066700_10331348	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300005561\|Ga0066699_10401861	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300005569\|Ga0066705_10416115	Not Available	842	Open in IMG/M
3300005576\|Ga0066708_10511165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	774	Open in IMG/M
3300005578\|Ga0068854_100634337	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300005713\|Ga0066905_100290141	All Organisms → cellular organisms → Bacteria → Proteobacteria	1279	Open in IMG/M
3300006031\|Ga0066651_10022394	All Organisms → cellular organisms → Bacteria	2740	Open in IMG/M
3300006031\|Ga0066651_10267123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	908	Open in IMG/M
3300006031\|Ga0066651_10424724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	707	Open in IMG/M
3300006034\|Ga0066656_10208713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1246	Open in IMG/M
3300006046\|Ga0066652_100121799	All Organisms → cellular organisms → Bacteria	2142	Open in IMG/M
3300006046\|Ga0066652_100257597	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300006046\|Ga0066652_100654584	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300006046\|Ga0066652_101768715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	560	Open in IMG/M
3300006173\|Ga0070716_100585174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	837	Open in IMG/M
3300006581\|Ga0074048_12549390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	743	Open in IMG/M
3300006755\|Ga0079222_10185926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1231	Open in IMG/M
3300006755\|Ga0079222_10240557	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300006791\|Ga0066653_10022874	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300006791\|Ga0066653_10399320	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300006797\|Ga0066659_10052532	All Organisms → cellular organisms → Bacteria	2579	Open in IMG/M
3300006797\|Ga0066659_11402552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	583	Open in IMG/M
3300006806\|Ga0079220_10541662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	809	Open in IMG/M
3300006806\|Ga0079220_11714944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	550	Open in IMG/M
3300006871\|Ga0075434_100939995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	879	Open in IMG/M
3300006881\|Ga0068865_101808489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	552	Open in IMG/M
3300006904\|Ga0075424_100229142	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300006904\|Ga0075424_101815536	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300006918\|Ga0079216_11412888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300006954\|Ga0079219_11480136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	613	Open in IMG/M
3300006954\|Ga0079219_11957823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	555	Open in IMG/M
3300009012\|Ga0066710_103718693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	573	Open in IMG/M
3300009137\|Ga0066709_102285998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	742	Open in IMG/M
3300009147\|Ga0114129_10153544	All Organisms → cellular organisms → Bacteria	3150	Open in IMG/M
3300010039\|Ga0126309_10530482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	729	Open in IMG/M
3300010040\|Ga0126308_11351680	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300010322\|Ga0134084_10166756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	751	Open in IMG/M
3300010322\|Ga0134084_10366450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	553	Open in IMG/M
3300010337\|Ga0134062_10758580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	515	Open in IMG/M
3300010366\|Ga0126379_10212893	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300010398\|Ga0126383_10064396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	3123	Open in IMG/M
3300012011\|Ga0120152_1092777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	869	Open in IMG/M
3300012198\|Ga0137364_10147825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1697	Open in IMG/M
3300012200\|Ga0137382_10054988	All Organisms → cellular organisms → Bacteria	2499	Open in IMG/M
3300012204\|Ga0137374_10055642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4024	Open in IMG/M
3300012206\|Ga0137380_10031612	All Organisms → cellular organisms → Bacteria	4879	Open in IMG/M
3300012207\|Ga0137381_10028909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4457	Open in IMG/M
3300012209\|Ga0137379_10084626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	3051	Open in IMG/M
3300012212\|Ga0150985_106738611	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300012351\|Ga0137386_10306944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1142	Open in IMG/M
3300012353\|Ga0137367_10354565	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300012353\|Ga0137367_10974907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	580	Open in IMG/M
3300012356\|Ga0137371_10000736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24830	Open in IMG/M
3300012360\|Ga0137375_10024880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6896	Open in IMG/M
3300012360\|Ga0137375_10560631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	959	Open in IMG/M
3300012469\|Ga0150984_122516357	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300012532\|Ga0137373_10275302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1348	Open in IMG/M
3300012922\|Ga0137394_11424425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	553	Open in IMG/M
3300012925\|Ga0137419_10289505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1248	Open in IMG/M
3300012955\|Ga0164298_10005516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4525	Open in IMG/M
3300012975\|Ga0134110_10432545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	589	Open in IMG/M
3300012977\|Ga0134087_10497099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	613	Open in IMG/M
3300012984\|Ga0164309_11059504	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300012987\|Ga0164307_11391980	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300013765\|Ga0120172_1070527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	873	Open in IMG/M
3300015371\|Ga0132258_10244733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4380	Open in IMG/M
3300018000\|Ga0184604_10005787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	2323	Open in IMG/M
3300018028\|Ga0184608_10047472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1681	Open in IMG/M
3300018054\|Ga0184621_10023492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1918	Open in IMG/M
3300018061\|Ga0184619_10002922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6251	Open in IMG/M
3300018468\|Ga0066662_11069247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	804	Open in IMG/M
3300018482\|Ga0066669_10025695	All Organisms → cellular organisms → Bacteria	3387	Open in IMG/M
3300021078\|Ga0210381_10211648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300022756\|Ga0222622_11305542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	534	Open in IMG/M
3300025911\|Ga0207654_11380293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	514	Open in IMG/M
3300025939\|Ga0207665_10144333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1700	Open in IMG/M
3300026300\|Ga0209027_1044933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1661	Open in IMG/M
3300026530\|Ga0209807_1051738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1893	Open in IMG/M
3300027765\|Ga0209073_10330470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	611	Open in IMG/M
3300027866\|Ga0209813_10081016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1073	Open in IMG/M
3300028536\|Ga0137415_10080452	All Organisms → cellular organisms → Bacteria	3118	Open in IMG/M
3300028705\|Ga0307276_10008050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1806	Open in IMG/M
3300028705\|Ga0307276_10014843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1450	Open in IMG/M
3300028705\|Ga0307276_10130863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300028705\|Ga0307276_10171526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	560	Open in IMG/M
3300028716\|Ga0307311_10012959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2003	Open in IMG/M
3300028717\|Ga0307298_10125967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	736	Open in IMG/M
3300028784\|Ga0307282_10126253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	1201	Open in IMG/M
3300028787\|Ga0307323_10194548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	732	Open in IMG/M
3300028791\|Ga0307290_10020583	All Organisms → cellular organisms → Bacteria	2299	Open in IMG/M
3300028807\|Ga0307305_10102476	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300028807\|Ga0307305_10399286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	621	Open in IMG/M
3300028811\|Ga0307292_10344406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	628	Open in IMG/M
3300028828\|Ga0307312_10428846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	870	Open in IMG/M
3300028878\|Ga0307278_10000754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15895	Open in IMG/M
3300028880\|Ga0307300_10087636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	927	Open in IMG/M
3300028881\|Ga0307277_10018060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2747	Open in IMG/M
3300028884\|Ga0307308_10214162	All Organisms → cellular organisms → Bacteria → Terrabacteria group	923	Open in IMG/M
3300028885\|Ga0307304_10434902	All Organisms → cellular organisms → Bacteria → Terrabacteria group	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.93%
Host-Associated	Host-Associated	8.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.20%
Plants	Host-Associated → Plants	8.07%
Aquatic	Environmental → Aquatic	3.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.73%
Sediment	Environmental → Aquatic → Sediment	3.11%
Freshwater	Environmental → Aquatic → Freshwater	0.62%
Roots	Host-Associated → Plants → Roots	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.67%
Loam	Environmental → Terrestrial → Soil → Loam	15.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.24%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.04%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	6.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.24%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.62%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.07%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	6.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.11%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.24%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.24%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.62%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.62%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.62%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_08458921	2228664022	Soil	VPDEPLTEQEEEIEPKECPRGHGPMRLRTRWANQQSRPGQKGSHAQPVTEWFCPRCGRTEPA
AP72_2010_repI_A100DRAFT_10443421	3300000837	Forest Soil	MSRVPDETQEEQELEPKECPRGHGQMRLRTRWANTQSRPGQKGSHAQPVTEWFCPRCGRTAPLA*
JGI1027J12803_1028821511	3300000955	Soil	DAPRMGRVPDEPLTEQEEEIEPKECPRGHGPMRLRTRWANQQSRPGQKGSHAQPVTEWFCPRCGRTEPA*
JGI10216J12902_1001492953	3300000956	Soil	MADPPEHSDVEPKDCPRGHGPMRLRTRWADRQAHPGRKGSHAEPVTEWVCPRCGRAAPLD
JGI10216J12902_1041518112	3300000956	Soil	MGRVPDEPQTAEQDLEPQECPRGHGPMRLRTRWANAQSRPGRKGSHAEPITEWFCPRCGRTAPAA*
JGI10216J12902_1109464632	3300000956	Soil	MGRVPDDPQPEEAVEPKECPSGHGPMRLRTRWAGAQSRPGRKGSHAEPVTEWFCPRCGRTAPLE*
JGI10216J12902_1117789513	3300000956	Soil	LADAKEETELEPKECPSGHGPMRLRTRWAGKQTRPGQKGSHAEPITEWVCPRCGRTAPLD
C688J14111_101367892	3300001305	Soil	MGRVPDEPQPPEPKECPRGHGQMRLRTRWANSQSRPGQKGSHAQPVTEWFCPRCGRTAPLD*
F14TB_1042619091	3300001431	Soil	MGRVPDEPTAEEAAVEPKECPRGHGPMRLRTRWANAQSRPGRKGGAQAQPVTEWFCQRCGRTAPLD
A2065W1_102839641	3300001537	Permafrost	VAEEKADKTVEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHAEPVTEWVCPRCGRAAPLE
C688J18823_100212415	3300001686	Soil	VPDEPQPPEPKECPRGHGQMRLRTRWANSQSRPGQKGSHAQPVTEWFCPRCGRTAPLD*
C688J35102_1207257981	3300002568	Soil	LAEPPEETVEPKACPRGHGPMRLRTRWAGQQAHPGRSGSRGEPVTEWVCPRCGRTAPVD*
C688J35102_1208928614	3300002568	Soil	MGRMADDPQPEQEEESEPPECPRGHGAMRLRTRWANAQSRPGQKGSHAQPVTEWFCPRCGRTAPAE*
Ga0063454_1009902242	3300004081	Soil	VPDEPQPPEPKECPRGHGAMRLRTRWANAQSRPGQKGSHAEPVTEWFCPRCGRTA
Ga0062593_1002244532	3300004114	Soil	MGRMADEPQPEQEQESEPPECPRGHGPMRLRTRWANAQSRPGQKGSHAQPVTEWFCPRCGRTAPAE*
Ga0062593_1007365102	3300004114	Soil	VPDEPLTEQEEEIEPKECPRGHGPMRLRTRWANQQSRPGQKGSHAEPVTEWFCPRCGRTEPA*
Ga0062593_1012181332	3300004114	Soil	MADDPQPEQEQESEPPECPRGHGPMRLRTRWANAQSRPGRKGSHAQPVTEWFCPRCGRTAPAA*
Ga0062593_1014049542	3300004114	Soil	VPDEPQQEQETEAPDCPRGHGSMRLRTRWANTQSRPGQKGSHAQPVTEWFCPRCGRTAPVE*
Ga0063455_1001724322	3300004153	Soil	MGRVPDEPQPPEPKECPRGHGQMRLRTRWASAQSRPGQKGSHAEPVTEWFCPRCGRTAPLD*
Ga0063455_1004127231	3300004153	Soil	VADEPAPTEEETPAAKDCPRGHGAMRMRTRWANAQSHPGRKGAHATAVTEWFCPRCGRTAPVD*
Ga0063455_1005713811	3300004153	Soil	VPDEPQPPEPKECPRGHGAMRLRTRWANTQSRPGQKGSHAEPVTEWFCPRCGRTAPAD*
Ga0063356_1004694404	3300004463	Arabidopsis Thaliana Rhizosphere	MGRVPDEPAAEGVEPEPKQCPQGHGAMRLRTRWANAQSHPGRKGAHAQPVTEWFCPRCGRTTPAD*
Ga0062595_1000109854	3300004479	Soil	MAPVTEPAEQTAPEPKECPKGHGAMRLRTRWAGQQTHPGRKGSKAEPITEWVCPRCGRTSPTD*
Ga0062595_1003108952	3300004479	Soil	MADEPQPEQEQESEPPECPRGHGPMRLRTRWANAQSRPGQKGSHAQPVTEWFCPRCGRTAPAE*
Ga0062595_1009012771	3300004479	Soil	MGRVPDEPLTEQEEEIEPKECPRGHGPMRLRTRWANQQSRPGQKGSHAEPVTEWFCPRCGRTEPA*
Ga0062595_1012708531	3300004479	Soil	LADAKEKTQLEPKECPSGHGPMRLRTRWAGQQTRPGQKGSHAEPVTEWVCPRCGRTAPLD
Ga0062595_1016549122	3300004479	Soil	MGRVPDEPQPEEAVEPKECPSGHGPMRLRTRWAGAQSRPGRKGSHAEPVTEWFCPRCGRTAPLE*
Ga0062595_1016621332	3300004479	Soil	VSDLPQKDPAPKECPRGHGAMRLRTRWTGNQAHPGRQGSRGTPVTEWMCPRCGRTVPVD*
Ga0062592_1005595912	3300004480	Soil	LADAKEETQLEPKECPSGHGPMRLRTRWAGQQTRPGQKGSHAEPVTEWVCPRCGRTAPLD
Ga0066395_103811082	3300004633	Tropical Forest Soil	MGRVPDEPQQEEEQETEPPDCPRGHGPMRLRTRWANAQSRPGRKGSHAQPVTEWFCPRCGRTAPVE*
Ga0062591_1007297652	3300004643	Soil	MADDPQPEQEQESEPPECPRGHGPMRLRTRWANAQSRPGRKGSHAQPVTEWFCPRCGRTAPAE*
Ga0062594_1006607922	3300005093	Soil	LDPKEETQLEPKQCPSGHGPMRVRTRWAGQQPRAGQKGSHAEPITEWVCPRCGRAAPLD*
Ga0066672_103892402	3300005167	Soil	MGRVPDEPEAEVAPEPKDCPRGHGPMRLRTRWANARAHPGQKGSHAQPVTEWFCPRCGRTAPLE*
Ga0066677_106842442	3300005171	Soil	MGRVPDEQPEAEVEEEAPEPKECPRGHGPMRLRTRWANARAHPGQKGSHAQPVTEWFCPRCGR
Ga0066683_101473392	3300005172	Soil	LADAKEETQLEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHAEPITEWVCPRCGRTAPVD
Ga0066673_101024121	3300005175	Soil	MGRVPDEPQVEQEQESEPPECPQGHGPMRLRTRWANAQSRPGRKGSHAQPVTEWFCPRCGRTASAA*
Ga0066690_101688384	3300005177	Soil	MGHVPDEPAAEAQAPEPKECPRGHGPMRLRTRWASAPAHPGRKGSHAQPVTEWFCPRCGRTAPLD*
Ga0066690_102709544	3300005177	Soil	MPEKDEPDQLEPKECPRGHGPMRLRTRWAGQQAHPGRKGSRGEPVTEWVCPRCGVTAPLDT*
Ga0066688_104197511	3300005178	Soil	VSETPEETPQEAPECPRGHGPMRLRTRWADRQAQPGRKGRAEPVSEWVCPRCGRTAPIE*
Ga0066684_102958632	3300005179	Soil	VPDEPEPEEEAPEPKECPRGHGPMRLRTRWADARAHPGRKGAHAQPVTEWFCPRCGRTAPLD*
Ga0066684_110230871	3300005179	Soil	VPDEQPEAEVEEEAPEPKECPRGHGPMRLRTRWADARAHPGRKGSHAQPVTEWFCPRCGRTAPLD*
Ga0066684_110909822	3300005179	Soil	MGRVPDEPEAEVEAAPEPKECPSGHGPMRLRTRWADARAHPGRKGSHAQPVTEWFCPRCGRTAPLD*
Ga0066388_1001413704	3300005332	Tropical Forest Soil	VPDEPQPEEAVEPKECPRGHGPMRLRTRWAGAQSRPGRKGSHAEPVTEWFCPRCGRTAPLE*
Ga0066388_1029246661	3300005332	Tropical Forest Soil	MGRVPDEPQQEEEQETEPPDCPRGHGPMRLRTRWANAQSRPGRKGSHAQPVTEWFCPRC
Ga0068868_1017522372	3300005338	Miscanthus Rhizosphere	LDPKEETQLEPKQCPSGHGPMRVRTRWAGQQPRPGQKGSHAEPITEWVCPRCGRAAPLD*
Ga0070714_1002639672	3300005435	Agricultural Soil	VPEEPQPPEPKECPRGHGAMRLRTRWANSQSRPGQKGSHAEPVTEWFCPRCGRTAPAD*
Ga0070713_1015948121	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VPDEPQPPEPKECPRGHGAMRLRTRWANSQSRPGQKGSHAEPVTEWFCPRCGRTAPAD*
Ga0070710_108960142	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGRVPDEPQPEEAVEPKECPSGHGPMRLRTRWAGAQSRPGRKGSHAEPATEWFCPRCGRTAPLE*
Ga0066686_110276932	3300005446	Soil	LPDAKEETQLEPKECPSGHGAMRLRTRWAAQQAHPGRKGSHAEPITEWVCPRCGRTAPLD
Ga0066689_103408452	3300005447	Soil	VPDEPAEEAEVEPPECPRGHGPMRLRTRWADARAHPGRKGSHAEPVTEWFCPRCGRTAPLD*
Ga0066681_103512283	3300005451	Soil	LADAKDETLEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHAEPITEWVCPRCGRAAPLD*
Ga0070685_102879922	3300005466	Switchgrass Rhizosphere	LDPKEETQLEPKQCPSGHGPMRVRTRWAGQQPRPGQKGSHAEPITEWVCPHCGRAAPLD*
Ga0070706_1000056876	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LADAKDETLEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHAEPITEWVCPRCGRAAPLE*
Ga0070706_1014426132	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGGVPEQPETEAAPEPKECPSGHGPMRLRTRWADARAHPGRKGSHAQPVTEWVCPRCGRAAPLD*
Ga0070706_1019148131	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ETEVEPKECPRGHGPMRLRTRWAGAQARPGRKGSHAEPVTEWFCPRCGRTEPLD*
Ga0070699_1008005421	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VPDVADAEQETLEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHAEPITEWVCPRCGRTAPLE*
Ga0073909_102343533	3300005526	Surface Soil	VPDEPQPEEAVEPKECPSGHGPMRLRTRWAGAQSRPGRKGSHAEPVTEWFCPRCGR
Ga0066697_105696662	3300005540	Soil	LAEPQEETPQEAPDCPRGHGPMRLRTRWADRQAQPGRKGRAEPVTEWVCPRCGRTAPID*
Ga0066697_106759233	3300005540	Soil	VADAQQETLEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHAEPITEWVCPRCGRTAPLD*
Ga0066698_103666471	3300005558	Soil	LAEPQEETPQEAPDCPRGHGPMRLRTRWADRQAQPGRKGRAEPVTEWVCPRCGRTA
Ga0066700_102455755	3300005559	Soil	DVSETPEETPQEAPECPRGHGPMRLRTRWADRQAQPGRKGRAEPVSEWVCPRCGRTAPIE
Ga0066700_103313482	3300005559	Soil	MGCVPDEPEAKVEAAPEPKECPRGHGPMRLRTRWADARAHPGRKGSHAQPVTEWFCPRCGRTAPLD*
Ga0066699_104018613	3300005561	Soil	MGHVPDEPAAEAQAPEPKECPRGHGPMRLRTRWASAPAHPGRKGSHAQPVTEWFCPRCGRTA
Ga0066705_104161151	3300005569	Soil	GRVPDEPEAEVAPEPKECPRGHGPMRLRTRWANARAHPGQKGSHAQPVTEWFCPRCGRTAPLD*
Ga0066708_105111652	3300005576	Soil	MGRVPDEPEAEVEAAPEPKECPRGHGPMRLRTRWADARAHPGRKGSHAQPVTEWFCPRCGRTAPLD*
Ga0068854_1006343371	3300005578	Corn Rhizosphere	RPSPRMGRVPDEPAPKDAEPEPKECPRGHGAMRLRTRWANAQAHPGRKGAHAQAVTEWFCPRCGRTAPAD*
Ga0066905_1002901413	3300005713	Tropical Forest Soil	MGRVPEEPDQEQETEAPECPRGHGPMRLRTRWASPQSRPGQKGSHAQPVTEWFCPRCGRTAPVE*
Ga0066651_100223943	3300006031	Soil	MADDPQPEQEEESEPPECPRGHGAMRLRTRWANAQSRPGQKGSHAQPVTEWFCPRCGRTAPAE*
Ga0066651_102671232	3300006031	Soil	MGRVPDEQPEAEVEEEAPEPKECPRGHGPMRLRTRWADARAHPGRKGSHAQPVTEWFCPRCGRTAPLD*
Ga0066651_104247241	3300006031	Soil	MGRVPDEPEAEVAPEPKECPRGHGPMRLRTRWANARAHPGQKGSHAQPVTEWFCPRCGRTAPLD*
Ga0066656_102087135	3300006034	Soil	LADAKEETQLEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHAEPITEWVCPRCGRTAPLD
Ga0066652_1001217993	3300006046	Soil	MADEPQPELEQESEPPECPRGHGPMRLRTRWENAQSRPGRKGSHAQPVTEWFCPRCGRTTPAA*
Ga0066652_1002575973	3300006046	Soil	MGRVPDEPDEPQPEPKECPRGHGPMRLRTRWASAQSHPGRKGSHAQPVTEWFCPRCGRTTPAE*
Ga0066652_1006545842	3300006046	Soil	MGRVPDEPQVEQEQESEPPECPRGHGAMRLRTRWANAQSRPGRKGSHAQPVTEWFCPRCGRTAAAA*
Ga0066652_1017687152	3300006046	Soil	KDETLEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHAEPITEWVCPRCGRAAPLD*
Ga0070716_1005851742	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGRVPDEPQPEEAVEPKECPSGHGPMRLRTRWAGAQSRPGRKGSHAEPVTEWFCPRCGRTAPLG*
Ga0074048_125493902	3300006581	Soil	LPDAKEETQLEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHAEPITEWVCPRCGRTAPLD
Ga0079222_101859263	3300006755	Agricultural Soil	MGRVPDEPQAPEPKECPRGHGQMRLRTRWANAQSRPGQKGSHAEPVTEWFCPRCGRTAPVD*
Ga0079222_102405572	3300006755	Agricultural Soil	MADEPQPEPEQESEPPECPRGHGPMRLRTRWANAQSRPGQKGSHAQPVTEWFCPRCGRTAPAE*
Ga0066653_100228742	3300006791	Soil	VPDEPQVEQEQESEPLECPRGHGPMRLRTRWANAQSRPGRKGSHAQPVTEWFCPRCGRTASAV*
Ga0066653_103993201	3300006791	Soil	MGCVPDEPQLPEPKECPRGHGPMRLRTRWASAQSHPGRKGSHAQPVTEWFCPRCGRTASVE*
Ga0066659_100525323	3300006797	Soil	VADAEQETLEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHAEPITEWVCPRCGRTAPLD*
Ga0066659_114025524	3300006797	Soil	EAEVAPEPKDCPRGHGPMRLRTRWANARAHPGQKGSHAQPVTEWFCPRCGRTAPLE*
Ga0079220_105416623	3300006806	Agricultural Soil	VPDEPAEPQEEQVEPKDCPRGHGPMRLRTRWANAQSRPGQKGGSHAQPVTEWFCPRCGRTAPLD*
Ga0079220_117149442	3300006806	Agricultural Soil	VPDEPAEQQEEQVEPKDCPRGHGPMRLRTRWANAQSRPGQKGGSHAQPVTEWFCPRCGRTAPL
Ga0075434_1009399951	3300006871	Populus Rhizosphere	MPEDPDQRPPPAKECPQGHGAMRLRTRWADRQAHPGRKGSRAEPVTEWVCPRCGRTAPLD
Ga0068865_1018084892	3300006881	Miscanthus Rhizosphere	MGRVPDEPQPEEAVEPKECPSGHGPMLLRTRWAGAQSRPGRKGSHAEPVTEWFCPRCGRTAPLE*
Ga0075424_1002291421	3300006904	Populus Rhizosphere	MADEPQPEQEQESEPPECPRGHGPMRLRTRWANAQSRPGQKGSHAQPVTEWFC
Ga0075424_1018155362	3300006904	Populus Rhizosphere	EQEEETEPKECPRGHGPMRLRTRWANQQSRPGQKGSHAEPVTEWFCPRCGRTEPA*
Ga0079216_114128881	3300006918	Agricultural Soil	LADVPKEPEQEAKECPQGHGPMRLRTRWAGQQARPGRSGSRGEPVTEWVCPRCGRSEPIS
Ga0079219_114801362	3300006954	Agricultural Soil	VPDEPAEQQEEQVEPKDCPRGHGPMRLRTRWANAQSRPGQKGGSHAQPVTEWFCPRCGRTAPLD*
Ga0079219_119578232	3300006954	Agricultural Soil	MGRVPDEPEQAEEQETEAPDCPRGHGPMRLRTRWANAQSHPGQKGSHAQPVTEWFCPRCGRTAPVE*
Ga0066710_1037186932	3300009012	Grasslands Soil	VPDEPEAEVAPEPKECPRGHGPMRLRTRWANARAHPGQKGSHAQPVTEWFCPRCGRTAPL
Ga0066709_1022859981	3300009137	Grasslands Soil	VPDEPEAEVAPEPKECPSGHGPMRLRTRWADARAHPGRKGSHAQPVTEWFCPR
Ga0114129_101535444	3300009147	Populus Rhizosphere	VPDEPAEETEVEPKECARGHGPMRLRTRWAGAQARPGRKGSHAEPVTEWFCPRCGRTEPLD*
Ga0126309_105304823	3300010039	Serpentine Soil	MGRVPDEPAAEEEVAPEPKDCPRGHGAMRLRTRWANAQSHPGRKGAHAQPVTEWFCPRCGRTAPLDD*
Ga0126308_113516802	3300010040	Serpentine Soil	GVADEPATEEVEPEAKECPRGHGPMRLRTRWANAQSHPGRKGAHAQALTEWFCPRCGRTVSVE*
Ga0134084_101667562	3300010322	Grasslands Soil	MGRVPDEQPEAEVEEEAPEPKECPRGHGPMRLRTRWADARAHPGRKGSHAQPVTEWFCPRCGRTAP
Ga0134084_103664501	3300010322	Grasslands Soil	MADDPQPEQEEESEPPECPRGHCARRLRTRWANAQSRPGQKGSHAQPVTEWFCPRC
Ga0134062_107585802	3300010337	Grasslands Soil	MGRVADEPQPEQEQESEPPECPRGHGPMRLRTRWANAQSRPGQKGSHAQPVTEWFCPRCGRTAPAE*
Ga0126379_102128932	3300010366	Tropical Forest Soil	MSRVPDETQEEQEVEPKECPRGHGQMRLRTRWANTKSRPGQKGSHAQPVTEWFCPRCGRTAPLD*
Ga0126383_100643962	3300010398	Tropical Forest Soil	MGRVPDETQEEQELEPKECPRGHGPMRLRTRWADTQSRPGRKGSHAQPVTEWFCPRCGRNAPVE*
Ga0120152_10927773	3300012011	Permafrost	MDGFPRMSPDLADAKEETQLEPKECPSGHGAMRLRTRWAGQQAHPGRKGSHAEPVTEWVCPR
Ga0137364_101478253	3300012198	Vadose Zone Soil	MGRVPDEPQAEAEVAPEPKECPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPLD*
Ga0137382_100549884	3300012200	Vadose Zone Soil	MGRMADEPQPELEQESEPPECPRGHGPMRLRTRWENAQSRPGRKGSHAQPVTEWFCPRCGRTTPAA*
Ga0137374_100556427	3300012204	Vadose Zone Soil	MGRVPEEPEAEVEVEPKDCPRGHGPMRLRTRWANAQSHPGKKGSHAQPVTEWFCPRCGRTAALD*
Ga0137380_100316123	3300012206	Vadose Zone Soil	VPNEPEAEVAPEPKECPSGHGPMRLRTRWADARAHPGRKGSHAQPVTEWFCPRCGRTAPLD*
Ga0137381_100289094	3300012207	Vadose Zone Soil	VPDEPEAEVAPEPKECPSGHGPMRLRTRWADARAHPGRKGSHAQPVTEWFCPRCGRTAPLD*
Ga0137379_100846262	3300012209	Vadose Zone Soil	MGRVPNEPEAEVAPEPKECPRGHGPMRLRTRWANARAHPGQKGSHAQPVTEWFCPRCGRTAPLD*
Ga0150985_1067386111	3300012212	Avena Fatua Rhizosphere	DMPVYFFVDPAMADDPQPEQEEESEPPECPRGHGAMRLRTRWANAQSRPGQKGSHAQPVTEWFCPRCGRTAPAE*
Ga0137386_103069443	3300012351	Vadose Zone Soil	MGRVPDEPEAEVAPEPKECPSGHGPMRLRTRWADARAHPGRKGSHAQPVTEWFCPR
Ga0137367_103545652	3300012353	Vadose Zone Soil	SAPRLGRVPEEPEAEVEAEAEPKECPRGHGPMRLRTRWANAPAHPGKKGSHAQPVTEWFCPRCGRTASVD*
Ga0137367_109749072	3300012353	Vadose Zone Soil	MGRVPDEPEAEVEVEPKDCPRGHGPMRLRTRWANAQSHPGKKGSHAQPVTEWFCPRCGRTAPLD*
Ga0137371_1000073621	3300012356	Vadose Zone Soil	MGRVPDEPEAEVAPEPKECPSGHGPMRLRTRWADARAHPGRKGSHAQPVTEWFCPRCGRTAPLD*
Ga0137375_1002488010	3300012360	Vadose Zone Soil	MGRVPEEPEAEVEVEPKDCPRGHGPMRLRTRWANAQSHPGKKGSHAQPVTEWFCPRCGRTAPLD*
Ga0137375_105606311	3300012360	Vadose Zone Soil	MGRVPDEPQAEAEVAPEPKECPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCG
Ga0150984_1225163571	3300012469	Avena Fatua Rhizosphere	DPQPEQEEESEPPECPRGHGAMRLRTRWANAQSRPGQKGSHAQPVTEWFCPRCGRTAPAE
Ga0137373_102753023	3300012532	Vadose Zone Soil	MGRVPDEPQAEAEVAPEPKECPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTASVD*
Ga0137394_114244251	3300012922	Vadose Zone Soil	MAENKAEETVEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHGEPITEWVCPRCGRAAPLE
Ga0137419_102895052	3300012925	Vadose Zone Soil	MADAEQETLEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHAEPITEWVCPRCGRTAPLD*
Ga0164298_100055161	3300012955	Soil	DGAALPEPPEETVEPKACPSGHGPMRLRTRWAGQQAHPGRSGSRGAPVTEWVCPRCGRTAPVD*
Ga0134110_104325451	3300012975	Grasslands Soil	MGRVPDEPEAEVAPEPKECPRGHGPMRLRTRWANARAHPGQKGSHAQPVTEWFC
Ga0134087_104970992	3300012977	Grasslands Soil	MGRVPDEQPEAEVEEEAPEPKECPRGHGPMRLPTRWADARAHPGRKGSHAQPVTEWFCPRCGRTAPLD*
Ga0164309_110595042	3300012984	Soil	GRRGRRDGDQAAAALFLDDHRMGRVPDEPQQEQETEAPDCPRGHGSMRLRTRWANIQSRPGQTGSHAQPVTEWFCPRCGRTAPVE*
Ga0164307_113919802	3300012987	Soil	MGRVPDKPQQEQEQEAEAPDCSRGHGAMRLRTRWANAQPRPGQKGSHAQPVTEWFCPRCGRTAPVE*
Ga0120172_10705271	3300013765	Permafrost	PDLADAKEETQLEPKECPSGHGAMRLRTRWAGQQAHPGRKGSHAEPVTEWVCPRCGRTAAVD*
Ga0132258_102447331	3300015371	Arabidopsis Rhizosphere	PSRRLPDVPRMGRLPDEPQAPEPKECPRGHGQMRLRTRWANAQSRPGQKGSHAEPVTEWFCPRCGRTAPVD*
Ga0184604_100057874	3300018000	Groundwater Sediment	MGRVPNEPEARTEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPLD
Ga0184608_100474722	3300018028	Groundwater Sediment	MGRVPDEPEARAEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPLD
Ga0184621_100234923	3300018054	Groundwater Sediment	MGRVPDEPEARTEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPLD
Ga0184619_1000292212	3300018061	Groundwater Sediment	MGRVPDEPEASTEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPLD
Ga0066662_110692472	3300018468	Grasslands Soil	MGRVPDEPEAEVAPEPKDCPRGHGPMRLRTRWANARAHPGQKGSHAQPVTEWFCPRCGRTAPLE
Ga0066669_100256952	3300018482	Grasslands Soil	VPDEPQVEQEQESEPLECPRGHGPMRLRTRWANAQSRPGRKGSHAQPVTEWFCPRCGRTASAA
Ga0210381_102116482	3300021078	Groundwater Sediment	LADAKEETQLEPKECPSGHGPMRLRTRWAGQQTRPGQKGSHAEPVTEWVCPRCGRT
Ga0222622_113055421	3300022756	Groundwater Sediment	MGRVPDEPEASAEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTE
Ga0207654_113802932	3300025911	Corn Rhizosphere	MGRVPDEPQPEEAVEPKECPTGHGPMRLRTRWAGAQSRPGRKGSHAEPVTEWFCPR
Ga0207665_101443334	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	PSRRLPDVPRMGRVPDEPQAPEPKECPRGHGQMRLRTRWANAQSRPGQKGSHAEPVTEWFCPRCGRTAPVD
Ga0209027_10449334	3300026300	Grasslands Soil	MADDPQPEQEEESEPPECPRGHGAMRLRTRWANAQSRPGQKGSHAQPVTEWFCPRCGRTAPAE
Ga0209807_10517386	3300026530	Soil	RVPDEPEAEVAPEPKECPRGHGPMRLRTRWANARAHPGQKGSHAQPVTEWFCPRCGRTAPLD
Ga0209073_103304702	3300027765	Agricultural Soil	MGRVPDEPQAPEPKECPRGHGQMRLRTRWANAQSRPGQKGSHAEPVTEWFCPR
Ga0209813_100810162	3300027866	Populus Endosphere	MADEPQPEQEQESEPPECPRGHGPMRLRTRWANAQSRPGQKGSHAQPVTEWFCPRCGRTAPAE
Ga0137415_100804523	3300028536	Vadose Zone Soil	MADAEQETLEPKECPSGHGPMRLRTRWAGQQAHPGRKGSHAEPITEWVCPRCGRTAPLD
Ga0307276_100080503	3300028705	Soil	MGRVPDEPAAEEEVAPEPKECPRGHGAMRLRTRWANAQSHPGRKGAHAQPVTEWFCPRCGRTAALDD
Ga0307276_100148434	3300028705	Soil	DLADAKEETQLEPKECPSRHGPMRLRTRWAGQQTRPGQRGSHAEPVTEWVCPRCGRTAPL
Ga0307276_101308632	3300028705	Soil	LPDAKEETQLEPKECPSGHGPMRLRTRWAGQQARPGQKGSHAEPVTEWVCPRCGRTAPST
Ga0307276_101715262	3300028705	Soil	PDQPEPQAEEAAEPKECPRGHGPMRLRTRWSNEQSHPGRKGAHAQPVTEWFCPRCGRTAPVD
Ga0307311_100129594	3300028716	Soil	MGRVPDEPEARTEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPR
Ga0307298_101259672	3300028717	Soil	MGRVPDEPEARAEDAPEPKDCPRGHGPTRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPLD
Ga0307316_103272881	3300028755	Soil	VADAKEETQLEPKDCPSGHGPMRLRTRWAGQQTRPGQKGSHAEPVTEWVCPRCGR
Ga0307282_101262532	3300028784	Soil	VPDEPEAQTEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPVD
Ga0307323_101945482	3300028787	Soil	EPEARTEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPLD
Ga0307290_100205834	3300028791	Soil	MGRVPDEPEASAEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPLD
Ga0307305_101024761	3300028807	Soil	LPDAKEEIELEPKECPSGHGPMRLRTRWAGQQARPGQKGSHAEPVTEWVCPRCGRTA
Ga0307305_103992862	3300028807	Soil	EASAEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPLD
Ga0307292_103444061	3300028811	Soil	AVQPAVAASAPRRDGRTTTQAAPAVPALLEPRMGRVPDEPEARTEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPLD
Ga0307312_104288461	3300028828	Soil	RVPDEPEAQTEDGPEPKDCPRGHGPMRMRTRWSNEQSHPGRKGAHAQQVTEWFCPRCGRTAALD
Ga0307278_1000075423	3300028878	Soil	VPDEPEAQTEDAPEPKECPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPLD
Ga0307300_100876362	3300028880	Soil	TQAAPVVPALLEPRMGRVPDEPEASTEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPLD
Ga0307277_100180604	3300028881	Soil	MGRVPDEPEAQAEEAVEPKECPRGHGAMRLRTRWANEQSHPGRKGAHAQPVTEWLCPRCGRTAPVD
Ga0307308_102141623	3300028884	Soil	PEAQTEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPVD
Ga0307304_104349022	3300028885	Soil	AAPAVAALLDPRMGRVPDEPEAQTEDAPEPKDCPRGHGPMRLRTRWANEQSHPGRKGAHAQPVTEWFCPRCGRTAPVD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040806

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences