Metagenome / Metatranscriptome Family F041127

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F041127
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	68 residues
Representative Sequence	MSIHKAIDQIVEAFIPEMERISEMHESEDQKERHYKAWLRATLQKFADDVREIEARNKAEDTDKNGAA
Number of Associated Samples	103
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.62 %
% of genes near scaffold ends (potentially truncated)	25.62 %
% of genes from short scaffolds (< 2000 bps)	78.75 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (17.500 % of family members)
Environment Ontology (ENVO)	Unclassified (42.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.625 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.42% β-sheet: 0.00% Coil/Unstructured: 39.58%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.67.3.1: Ribosome recycling factor, RRF	d1dd5a_	1dd5	0.80371
d.67.3.1: Ribosome recycling factor, RRF	d1wqga_	1wqg	0.78595
e.29.1.2: RNA-polymerase beta-prime	d4g7hd_	4g7h	0.76869
d.67.3.1: Ribosome recycling factor, RRF	d1ek8a_	1ek8	0.76724
a.47.3.1: Cag-Z	d1s2xa1	1s2x	0.75813

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF07690	MFS_1	21.88
PF03358	FMN_red	7.50
PF05974	DUF892	5.00
PF06823	DUF1236	3.12
PF09265	Cytokin-bind	0.62
PF00106	adh_short	0.62
PF00719	Pyrophosphatase	0.62
PF05532	CsbD	0.62
PF12006	DUF3500	0.62
PF13419	HAD_2	0.62
PF11752	DUF3309	0.62
PF05239	PRC	0.62
PF13823	ADH_N_assoc	0.62
PF00480	ROK	0.62
PF11160	Hva1_TUDOR	0.62
PF02518	HATPase_c	0.62
PF04679	DNA_ligase_A_C	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	5.00
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.25
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.62
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.62
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.62
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.25 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	59.38 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	34.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.38 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	34.38 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.75 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	34.38 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.00 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	34.38 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.00 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.62 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16506869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1460	Open in IMG/M
2228664022\|INPgaii200_c1062795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1014462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1217	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10018829	All Organisms → cellular organisms → Bacteria → Proteobacteria	1897	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10114298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1009455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1867	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1090365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10001620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4862	Open in IMG/M
3300000956\|JGI10216J12902_101306683	All Organisms → cellular organisms → Bacteria → Proteobacteria	1304	Open in IMG/M
3300003911\|JGI25405J52794_10109585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300004267\|Ga0066396_10087654	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300004479\|Ga0062595_101451170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M
3300005167\|Ga0066672_10131472	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300005172\|Ga0066683_10015593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4136	Open in IMG/M
3300005172\|Ga0066683_10326952	All Organisms → cellular organisms → Bacteria → Proteobacteria	953	Open in IMG/M
3300005179\|Ga0066684_10116418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1659	Open in IMG/M
3300005181\|Ga0066678_10319019	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300005184\|Ga0066671_10261798	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300005187\|Ga0066675_10466909	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300005332\|Ga0066388_100091716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3464	Open in IMG/M
3300005332\|Ga0066388_100217154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2540	Open in IMG/M
3300005332\|Ga0066388_100494512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1860	Open in IMG/M
3300005332\|Ga0066388_100804344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1532	Open in IMG/M
3300005332\|Ga0066388_101201158	All Organisms → cellular organisms → Bacteria → Proteobacteria	1296	Open in IMG/M
3300005332\|Ga0066388_101938830	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300005332\|Ga0066388_102208825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	993	Open in IMG/M
3300005332\|Ga0066388_102330223	All Organisms → cellular organisms → Bacteria → Proteobacteria	969	Open in IMG/M
3300005332\|Ga0066388_103539298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	797	Open in IMG/M
3300005332\|Ga0066388_105002866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300005332\|Ga0066388_108315845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300005363\|Ga0008090_10009833	All Organisms → cellular organisms → Bacteria → Proteobacteria	1163	Open in IMG/M
3300005363\|Ga0008090_10056695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300005363\|Ga0008090_10144749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1071	Open in IMG/M
3300005363\|Ga0008090_12509988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594	Open in IMG/M
3300005363\|Ga0008090_15725983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300005363\|Ga0008090_15846903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300005447\|Ga0066689_10027265	All Organisms → cellular organisms → Bacteria → Proteobacteria	2874	Open in IMG/M
3300005467\|Ga0070706_100093666	All Organisms → cellular organisms → Bacteria → Proteobacteria	2787	Open in IMG/M
3300005518\|Ga0070699_100137190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2158	Open in IMG/M
3300005540\|Ga0066697_10351812	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300005552\|Ga0066701_10252498	All Organisms → cellular organisms → Bacteria → Proteobacteria	1091	Open in IMG/M
3300005554\|Ga0066661_10949406	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300005587\|Ga0066654_10072832	All Organisms → cellular organisms → Bacteria → Proteobacteria	1588	Open in IMG/M
3300005713\|Ga0066905_100278427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1301	Open in IMG/M
3300005713\|Ga0066905_100593341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	936	Open in IMG/M
3300005713\|Ga0066905_100853833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	793	Open in IMG/M
3300005713\|Ga0066905_101135131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300005713\|Ga0066905_101924084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300005764\|Ga0066903_100079239	All Organisms → cellular organisms → Bacteria	4274	Open in IMG/M
3300005764\|Ga0066903_100272956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2640	Open in IMG/M
3300005764\|Ga0066903_100358041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2365	Open in IMG/M
3300005764\|Ga0066903_100458391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2135	Open in IMG/M
3300005764\|Ga0066903_100604714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1901	Open in IMG/M
3300005764\|Ga0066903_101725185	All Organisms → cellular organisms → Bacteria → Proteobacteria	1193	Open in IMG/M
3300005764\|Ga0066903_101993318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1115	Open in IMG/M
3300005764\|Ga0066903_103371733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	862	Open in IMG/M
3300005764\|Ga0066903_104548050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300005937\|Ga0081455_10141358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1869	Open in IMG/M
3300006034\|Ga0066656_10252167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1134	Open in IMG/M
3300006049\|Ga0075417_10201655	All Organisms → cellular organisms → Bacteria → Proteobacteria	942	Open in IMG/M
3300006755\|Ga0079222_12603360	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300006800\|Ga0066660_10850731	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300006806\|Ga0079220_10881630	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300006904\|Ga0075424_100393077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1478	Open in IMG/M
3300006904\|Ga0075424_100910776	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300006969\|Ga0075419_10779254	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300007076\|Ga0075435_101080966	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300009012\|Ga0066710_100491556	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1848	Open in IMG/M
3300009137\|Ga0066709_100372127	All Organisms → cellular organisms → Bacteria → Proteobacteria	1971	Open in IMG/M
3300009137\|Ga0066709_100465869	All Organisms → cellular organisms → Bacteria → Proteobacteria	1771	Open in IMG/M
3300010041\|Ga0126312_10167250	All Organisms → cellular organisms → Bacteria → Proteobacteria	1531	Open in IMG/M
3300010046\|Ga0126384_10437633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1113	Open in IMG/M
3300010046\|Ga0126384_10876457	All Organisms → cellular organisms → Bacteria → Proteobacteria	809	Open in IMG/M
3300010046\|Ga0126384_11222159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300010046\|Ga0126384_12140975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300010047\|Ga0126382_10645654	All Organisms → cellular organisms → Bacteria → Proteobacteria	879	Open in IMG/M
3300010047\|Ga0126382_11901954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300010048\|Ga0126373_10194694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1961	Open in IMG/M
3300010048\|Ga0126373_10895999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	951	Open in IMG/M
3300010048\|Ga0126373_11276648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300010048\|Ga0126373_11666344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300010358\|Ga0126370_10098017	All Organisms → cellular organisms → Bacteria → Proteobacteria	2020	Open in IMG/M
3300010360\|Ga0126372_10097707	All Organisms → cellular organisms → Bacteria → Proteobacteria	2197	Open in IMG/M
3300010360\|Ga0126372_10343972	All Organisms → cellular organisms → Bacteria → Proteobacteria	1334	Open in IMG/M
3300010361\|Ga0126378_12275233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300010366\|Ga0126379_11806625	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300010366\|Ga0126379_13522545	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300010376\|Ga0126381_100230611	All Organisms → cellular organisms → Bacteria → Proteobacteria	2495	Open in IMG/M
3300010376\|Ga0126381_101162145	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300010376\|Ga0126381_102464329	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300010398\|Ga0126383_10129189	All Organisms → cellular organisms → Bacteria → Proteobacteria	2319	Open in IMG/M
3300010398\|Ga0126383_10668716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1115	Open in IMG/M
3300010398\|Ga0126383_11873929	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300012022\|Ga0120191_10008164	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300012198\|Ga0137364_10007574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5995	Open in IMG/M
3300012198\|Ga0137364_10108052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1968	Open in IMG/M
3300012198\|Ga0137364_10300091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1192	Open in IMG/M
3300012199\|Ga0137383_10222652	All Organisms → cellular organisms → Bacteria → Proteobacteria	1383	Open in IMG/M
3300012201\|Ga0137365_10023344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4792	Open in IMG/M
3300012204\|Ga0137374_10304302	All Organisms → cellular organisms → Bacteria → Proteobacteria	1306	Open in IMG/M
3300012205\|Ga0137362_10159743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1930	Open in IMG/M
3300012206\|Ga0137380_10227529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1685	Open in IMG/M
3300012208\|Ga0137376_10659309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300012208\|Ga0137376_11435853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300012209\|Ga0137379_10028229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5399	Open in IMG/M
3300012209\|Ga0137379_10059950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3664	Open in IMG/M
3300012210\|Ga0137378_10132828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2302	Open in IMG/M
3300012211\|Ga0137377_11517180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300012351\|Ga0137386_10244402	All Organisms → cellular organisms → Bacteria → Proteobacteria	1290	Open in IMG/M
3300012351\|Ga0137386_11272814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300012356\|Ga0137371_10454003	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300012357\|Ga0137384_10059440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3169	Open in IMG/M
3300012359\|Ga0137385_10155445	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300012361\|Ga0137360_11381048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300012362\|Ga0137361_11757370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300012582\|Ga0137358_10019302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4369	Open in IMG/M
3300012948\|Ga0126375_10000990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8708	Open in IMG/M
3300012951\|Ga0164300_10350842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300012971\|Ga0126369_10070428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3064	Open in IMG/M
3300012971\|Ga0126369_10364316	All Organisms → cellular organisms → Bacteria → Proteobacteria	1472	Open in IMG/M
3300012976\|Ga0134076_10461248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300012977\|Ga0134087_10154758	All Organisms → cellular organisms → Bacteria → Proteobacteria	1000	Open in IMG/M
3300014157\|Ga0134078_10535926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300015356\|Ga0134073_10019405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1616	Open in IMG/M
3300015371\|Ga0132258_10599918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2764	Open in IMG/M
3300015374\|Ga0132255_105156863	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300016371\|Ga0182034_10272965	All Organisms → cellular organisms → Bacteria → Proteobacteria	1344	Open in IMG/M
3300018431\|Ga0066655_10006767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4757	Open in IMG/M
3300018433\|Ga0066667_10035722	All Organisms → cellular organisms → Bacteria	2852	Open in IMG/M
3300018433\|Ga0066667_10259051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1324	Open in IMG/M
3300018468\|Ga0066662_10963149	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300018468\|Ga0066662_11508221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300018482\|Ga0066669_10112635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1919	Open in IMG/M
3300018482\|Ga0066669_10820196	All Organisms → cellular organisms → Bacteria → Proteobacteria	825	Open in IMG/M
3300020579\|Ga0210407_11362381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300021168\|Ga0210406_10108157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2358	Open in IMG/M
3300021361\|Ga0213872_10267220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300021560\|Ga0126371_10092055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3001	Open in IMG/M
3300021560\|Ga0126371_10181264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2191	Open in IMG/M
3300021560\|Ga0126371_11593355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300025910\|Ga0207684_10131505	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300026317\|Ga0209154_1242195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300026326\|Ga0209801_1095489	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300026334\|Ga0209377_1247732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300026528\|Ga0209378_1110816	All Organisms → cellular organisms → Bacteria → Proteobacteria	1196	Open in IMG/M
3300026528\|Ga0209378_1122388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1113	Open in IMG/M
3300026538\|Ga0209056_10538287	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300026552\|Ga0209577_10552138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300027775\|Ga0209177_10218190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300027873\|Ga0209814_10146676	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300028705\|Ga0307276_10215630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300028878\|Ga0307278_10007877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5036	Open in IMG/M
3300028881\|Ga0307277_10228222	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031545\|Ga0318541_10348686	All Organisms → cellular organisms → Bacteria → Proteobacteria	827	Open in IMG/M
3300031719\|Ga0306917_10092686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2150	Open in IMG/M
3300031896\|Ga0318551_10671197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300031912\|Ga0306921_11270498	All Organisms → cellular organisms → Bacteria → Proteobacteria	816	Open in IMG/M
3300031941\|Ga0310912_10977033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300031954\|Ga0306926_11047446	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300032261\|Ga0306920_101054644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1181	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.12%
Host-Associated	Host-Associated	6.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.12%
Plants	Host-Associated → Plants	6.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.00%
Loam	Environmental → Terrestrial → Soil → Loam	18.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.25%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.38%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	3.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.25%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.75%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	3.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.25%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.25%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.62%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.62%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00533360	2088090014	Soil	MSIHKAIDQIVEAFIPEMERISRMDEGEEQKERHYKAWLRATLQKFADDVREIEARNEAERSRDHQA
INPgaii200_10627951	2228664022	Soil	MSIHKAIDQIVEAFIPEMERISEMHESEDQKERHYKAWLRATLQKFADDVREIEARNKAEDTDKNGAA
AP72_2010_repI_A01DRAFT_10144621	3300000579	Forest Soil	MSVNKMIDQIVEAFIPEMTKISKTSESEEQKERHYKAWLRATLQKFADDVRETAARDKEANGLE*
AF_2010_repII_A1DRAFT_100188292	3300000597	Forest Soil	MSINKAIDQIVEAFIPEMTKISQTHESEEQKERHYKAWLRATLQKFADDVRKAATHDKQTDSDGAT*
AF_2010_repII_A1DRAFT_101142981	3300000597	Forest Soil	MSIHKAIDQIGETFIPEMERISKMNESEEQKERHYKAWLRATLQKFADDVRDIEKRNT
AF_2010_repII_A100DRAFT_10094552	3300000655	Forest Soil	MSIHKAIDQIVETFIPEMERISKMNESAEQKERHYKAWIRATLQKFADDVRDIETRNKTKDSRGNDAA*
AF_2010_repII_A100DRAFT_10903651	3300000655	Forest Soil	MSIHKAIDQIVEAFIPEMERISRMDESEEQKERHYKTWLRATLQKFADDVREIEARNEAEGPNAAGVA
AF_2010_repII_A001DRAFT_100016203	3300000793	Forest Soil	MSIHKAIDQIVETFIPEMERISKMNESEEQKERHYKAWLRATLQKFADDVRDIEKHNTAERQRDNDAA*
JGI10216J12902_1013066832	3300000956	Soil	IVEAFIPEMEKISRMNESEEQKDRHYKAWLRATLQKFADDVREIEARNGAEGSRDHHAA*
JGI25405J52794_101095851	3300003911	Tabebuia Heterophylla Rhizosphere	MSVPKAIDQIVEAFIPEMEKISKMRESEEQKERHYKAWLRATLQKFADDVRDIELSKTAEDSPGRLA*
Ga0066396_100876542	3300004267	Tropical Forest Soil	AAEGPESMSINKTIDQIVEAFIPEMTKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDKETDADGAT*
Ga0062595_1014511701	3300004479	Soil	MSIHKAIDQIVEAFIPEMERISRMDEGEEQKERHYKAWLRATLQKFADDVREIEARNEAERSRDHHAA*
Ga0066672_101314723	3300005167	Soil	MSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDKETDADGAT*
Ga0066683_100155934	3300005172	Soil	MSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVRKIEASNKAADTSKNGAA*
Ga0066683_103269521	3300005172	Soil	GGGGSRVRLGTHSMSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDKETDTDGAT*
Ga0066684_101164182	3300005179	Soil	MSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVLEIEASNKAEGTSKNGAA*
Ga0066678_103190192	3300005181	Soil	MSIHKAIDQIVEAFIPEMAKISNMHESEDQKERHYKAWLRATLQKFAEDVLEIEASNKAEGTSKNGAA*
Ga0066671_102617983	3300005184	Soil	AMSIHKAIDRIVEAFIPEMEKISRMNESEEQKDRHYKAWLRATLQKFADDVREIEARNGAEGSRDHHAA*
Ga0066675_104669092	3300005187	Soil	MSIHKAIDRIVEAFIPEMEKISRMNESEEQKDRHYKAWLRATLQKFADDVREIEARNGAEGSRDHHAA*
Ga0066388_1000917163	3300005332	Tropical Forest Soil	MSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDTEIDTDGAT*
Ga0066388_1002171544	3300005332	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMEKISRMDESEEQKERHYKAWLRATLQRFADEVREIEARNGAEGSRDHHAA*
Ga0066388_1004945122	3300005332	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMERISKMHESEDQKERHYKAWLRAALQKFAEDVRDIESRNKAADTGKNGAR*
Ga0066388_1008043442	3300005332	Tropical Forest Soil	MSVNKMIDQIVEAFIPEMTKISKTSESEEQKERHYKAWLRATLQKFADDVRETAARDKEADPHGPK*
Ga0066388_1012011582	3300005332	Tropical Forest Soil	MSINKTIDQIVEAFIPEMTKISKTDGSEDQKERHYKAWLRATLQKFADDVTEIAARNEESDSYDNDAA*
Ga0066388_1019388302	3300005332	Tropical Forest Soil	MSINKMIDQIVEAFIPEMAKISKTNESEEQKERHYKAWLRATLQKFADDLRKSQPLNKEEDSPR*
Ga0066388_1022088252	3300005332	Tropical Forest Soil	MSINKTIDQIVEAFIPEMTKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDKETDADGAT*
Ga0066388_1023302232	3300005332	Tropical Forest Soil	MSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVTKIAAHDTETGTDAAT*
Ga0066388_1035392982	3300005332	Tropical Forest Soil	MSIPKAIDQIVEAFIPEMERISRMDESEEQKQRHYKAWLRATLQKFADDVRKTEARNEGEGSRDHYAA*
Ga0066388_1050028661	3300005332	Tropical Forest Soil	MSINKAIDQIVEAFIPEMTKISQTHESEEQKERHYKAWLRATLQKFADDVRKTAAHDKGTDGAT*
Ga0066388_1083158452	3300005332	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMARISHMHETEDQKERQYKAWLRATLQRFAEDVRDIESRNKAEDAGK
Ga0008090_100098332	3300005363	Tropical Rainforest Soil	MSIHKAIDQIVETFIPEMERISKMNESEEQKERHYKAWLRATLQKFADDVRDIEKRNTAEHPRDNDAA*
Ga0008090_100566952	3300005363	Tropical Rainforest Soil	MSINKAIDQIVEAFIPEMTKISQMHESDEQKERHYKAWLRATLQKFADDVRKTAAHDKQTDDDGAT*
Ga0008090_101447493	3300005363	Tropical Rainforest Soil	MSIHKAIDQIVEAFIPEMEKISRMDESEEQKERHYKAWLRATLQRFADEVREIEARNGAEGSRR
Ga0008090_125099881	3300005363	Tropical Rainforest Soil	MSIHKAVDQIVEAFIPEMARISNMHETEDQKERQYKAWLRATLQRFAEDVRDIESRNKAEDAGKNGA
Ga0008090_157259832	3300005363	Tropical Rainforest Soil	MSIHKAIDQIGETFIPEMERISKMNESEEQKERHYKAWLRATLQKFADDVRDIEKRNTAE
Ga0008090_158469031	3300005363	Tropical Rainforest Soil	KSMSINKMIDQIVEAFIPEMAKISKTNESEEQKERHYKAWLRATLQKFADDVRKSQPLNKEEDSPR*
Ga0066689_100272654	3300005447	Soil	MSIHKAIDQIVEAFIPEMAKISNMHESEDQKERHYKAWLRATLQKFAEDVRKIEASNKAADTSKNGAA*
Ga0070706_1000936662	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDKETDTDGAT*
Ga0070699_1001371901	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VRLGPHSMSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDKETDADGAT*
Ga0066697_103518122	3300005540	Soil	MSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVRKIEGSNKAADTSKNGAA*
Ga0066701_102524981	3300005552	Soil	MSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFADDVLEIEASNKAEDTSKKGAA*
Ga0066661_109494061	3300005554	Soil	DQIVEAFIPEMERISRMNESEEQKERHYKAWLRATLQKFADEVREIEARNGAEGSRDHHAA*
Ga0066654_100728322	3300005587	Soil	MSIPKAIDQIVEAFIPEMTRISNMHESEDQKERHYKAWLRATLRKFAEDVLEIEASNKAEDTSKNGAA*
Ga0066905_1002784273	3300005713	Tropical Forest Soil	MFSIPKAIDQIVEAFIPEMERISEMHESEDQKERHYKAWLRATLQKFAEEVRHIESRNKAQDTGKNGAS*
Ga0066905_1005933411	3300005713	Tropical Forest Soil	MSINKTIDQIVEAFIPEMAKISKTNESEEQKERHYKAWLRATLQKFADDVRKSQPLNKEEDPPR*
Ga0066905_1008538332	3300005713	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMARISNMHETEDQKERQYKAWLRATLQRFAEDVRDIESRNKAE
Ga0066905_1011351312	3300005713	Tropical Forest Soil	MSIHKAIDQIVETFIPEMERISKMNESEEQKERHYKAWLRATLQKFADDVRDIEKRNTAERRDNDAA*
Ga0066905_1019240843	3300005713	Tropical Forest Soil	IDQIVETFIPEMERISKMNESEEQKERHYKAWLRATLQKFADDVRDIEKRNTAERPRDNDAA*
Ga0066903_1000792398	3300005764	Tropical Forest Soil	MSIHKAIDQIVETFIPEMERISKMNESEEQKERHYKAWLRATLQKFADDVRHDNGADMSSES*
Ga0066903_1002729565	3300005764	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMERISRMNETEEQKERHYKAWLRAMLQKFADEVREIEARGQEGSRPAGQGETLGLPSRP
Ga0066903_1003580413	3300005764	Tropical Forest Soil	MSIHKAIDQIVETFIPEMERISKMNESKEQKERHYKAWLRATLQKFADDVRNIEKRNTAERPRDNDAA*
Ga0066903_1004583912	3300005764	Tropical Forest Soil	MSINKTIDQIVEAFIPEMAKISKTNESEEQKERHYKAWLRATLQKFANDVRKSQPLNKEEDLPR*
Ga0066903_1006047142	3300005764	Tropical Forest Soil	MSINKAIDQIVEAFIPEMTKISQMHESEEQKERHYKAWLRATLQKFADEVRKTAAHDKQTDDDGAT*
Ga0066903_1017251851	3300005764	Tropical Forest Soil	MSINKAIDQIVEAFIPEMRKVSQTHESEEQKERHYKAWLRATLQKFADDVRKTAAHDKETDSDGAK*
Ga0066903_1019933181	3300005764	Tropical Forest Soil	MSINKAIDQIVEAFVPEMMKISQTHESEEQKERHYKAWLRATLQKFADDVRKTAAHDKQTDGDGGT*
Ga0066903_1033717332	3300005764	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMEKISRMDESEVQKERHYKAWLRATLQRFADDVREIEARNGAAGSRDHHAA*
Ga0066903_1045480501	3300005764	Tropical Forest Soil	MSINKAIDQIVEAFIPEMTKISQTHESEEQKERHYKAWLRTTLQKFADDVRKTAAHDKQTDGDGAT*
Ga0081455_101413582	3300005937	Tabebuia Heterophylla Rhizosphere	MSSINKAIDQIVEAFIPEMTKISKTNESEEQKERHYKAWLRATLQKFADDVRENAARNKEGDSHDSGAA*
Ga0066656_102521672	3300006034	Soil	MSIHKAIDRIVEAFIPEMEKISRMNESEAQKDRHYKAWLRATLQKFADDVREIEARNGAEGSRDHHAA*
Ga0075417_102016552	3300006049	Populus Rhizosphere	MSVHKAIDQIVEAFIPEMERISKMKESEEQKERHYKAWLRATLQRFAADVRDIEVSNTAEDSRGGAA*
Ga0079222_126033602	3300006755	Agricultural Soil	FIPEMEKISRMHESEEQKERHYKAWLRATLQKFADDVRESEARGQAGGSRDHHAA*
Ga0066660_108507311	3300006800	Soil	MSIHKAIDRIVEAFIPEMEKISRMNESEEQKDRHYKAWLRATLQKFADDVREIEARNGAE
Ga0079220_108816302	3300006806	Agricultural Soil	MSIHKAIDQIVEAFIPEMEKISRMHESEEQKERHYKAWLRATLQKFADDVRESEARGQAGGSRDHHAA*
Ga0075424_1003930773	3300006904	Populus Rhizosphere	MSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVTKIAAHDTETDTDGAT*
Ga0075424_1009107761	3300006904	Populus Rhizosphere	MSIHKAIDQIVEAFIPEMEKISRMHESEEQKERHYKAWLRATLQKFADDVREIEARGQAGGSRDHHAA*
Ga0075419_107792541	3300006969	Populus Rhizosphere	KAIDQIVEAFIPEMERISKMKESEEQKERHYKAWLRATLQRFAADVRDIEVSNTAEDSRGGAA*
Ga0075435_1010809662	3300007076	Populus Rhizosphere	IVEAFIPEMEKISRMHESEEQKERHYKAWLRATLQKFADDVRESEARGQAGGSRDHHAA*
Ga0066710_1004915563	3300009012	Grasslands Soil	MSINKTIDQIVEAFIPAMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDKETDADGAT
Ga0066709_1003721272	3300009137	Grasslands Soil	VSRRAAETLAVEDRTMSIHKAIDQIVEAFIPEMAKISNMHESEDQKERHYKAWLRATLQKFAEDVLEIEASNKAEGTSKNGAA*
Ga0066709_1004658691	3300009137	Grasslands Soil	MSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVREIEASNKAEDTSKKGAA*
Ga0126312_101672501	3300010041	Serpentine Soil	MSVHKAIAQIVEAFIPEMEKISKMKESEEQKERHYKAWLRATLQRFAADVRDIEVSNTAEDSRGGAA*
Ga0126384_104376332	3300010046	Tropical Forest Soil	MSIHKAIDQIVETFIPEMERISKMNESEEQKERHYKAWLRATLQKFADDVRDIEKRNTAERPRDNDAA*
Ga0126384_108764572	3300010046	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMEKISRMDESQKQKERHYKAWLRTTLQRFADDVREIEARNGAEGSRDYHAA*
Ga0126384_112221591	3300010046	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMARISNMHETEDQKERQYKAWLRATLQRFAEDVRDIESRNKAEDAGKN
Ga0126384_121409752	3300010046	Tropical Forest Soil	MSINKTIDQIVEAFIPEMTKISQMHESEEQKERHYKAWLRATLQKFADEVRKTAAHDKQTDDDGAT*
Ga0126382_106456542	3300010047	Tropical Forest Soil	GSMSSINKAIDQIVEAFIPEITKISKTNESEEQKERHYKAWLRATLQKFADDVREIAARNKEEESHDGGAA*
Ga0126382_119019541	3300010047	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMARISEMHESEDQKERHYKAWLRATLQKFAEEVRHIESRNKAQDTGKNGAS*
Ga0126373_101946942	3300010048	Tropical Forest Soil	MSSNKAIDQIVEAFIPEMTKISQMHESEEQKERHYKAWLRATLQKFADEVRKTAAHDKQTDDDGAT*
Ga0126373_108959992	3300010048	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMARISNMHETEDQKERQYKAWLRATLQRFAEDVRDIESRNKAEDAGKNGVS*
Ga0126373_112766482	3300010048	Tropical Forest Soil	MSINKMIDQIVEAFIPEMSKISKTNESEEQKERHYKAWLRATLQKFADDLRKSQPLNKEEDSPR*
Ga0126373_116663441	3300010048	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMARISKMNESEEQKERHYKAWLRATLQKFADDVKEIEARSKEENSHGNDAA*
Ga0126370_100980172	3300010358	Tropical Forest Soil	MSINKAIDQIVEAFIPEMTKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDTEIDTDGAT*
Ga0126372_100977073	3300010360	Tropical Forest Soil	GPHSMSINKTIDQIVEAFVPEMTKIAQMHESEEQKERHYKAWLRATLQKFADDVTKIAAHDTETGTDAAT*
Ga0126372_103439722	3300010360	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMEKISRMDESEEQKERHYKAWLRATLQRFADEVREIEARNGGGGSRDPHAA*
Ga0126378_122752331	3300010361	Tropical Forest Soil	MSINKTIDQIVEAFIPEMTKISKTNESEDQKERHYKAWLRATLQKFADDVTEIAARNEESDSYDNDAA*
Ga0126379_118066251	3300010366	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMEKISRMDESEEQKERHYKAWLRTTLQRFADDVREIEARNGAEGSRDYHAA*
Ga0126379_135225451	3300010366	Tropical Forest Soil	IDQIVEAFIPEMEKISRMDESEEQKERHYKAWLRATLQRFADEVREIEARNGAEGSRGHHAA*
Ga0126381_1002306112	3300010376	Tropical Forest Soil	MSIHKAIDQIVETFIPEMERISKMHESKEQKERHYKAWLRATLQKFADDVRNIEKRNTAERPRDNDAA*
Ga0126381_1011621451	3300010376	Tropical Forest Soil	MSIHKAIDQIVETFIPEMERISKMNESAEQKERHYKAWIRATLQKCADDVRDIETRNKTKDSRGNDAA*
Ga0126381_1024643291	3300010376	Tropical Forest Soil	MSINKAIDQIVEAFIPEMTKISQMHESEEQKERHYKAWLRATLQKFADDVMKTAAHDKQTDGDGAT*
Ga0126383_101291893	3300010398	Tropical Forest Soil	MSINKTIDQIVEAFIPEMTKISQTHESEEQKERHYKAWLRTTLQKFADDVRKTAAHDKQTDGDGAT*
Ga0126383_106687162	3300010398	Tropical Forest Soil	MSINKTIDQIVEAFIPEMAEISKTNESEEQKERHYKAWLRATLQKFANDVRKSQPLNKEEDLPR*
Ga0126383_118739291	3300010398	Tropical Forest Soil	MSSINKAIDQIVEAFIPEMTKISKTNESEEQKERHYKAWLRATLQKFADDVREIAARNKEEESHDGGAA*
Ga0120191_100081642	3300012022	Terrestrial	MSVHKAIDQIVEAFIPEMEKISKMKESEEQKERHYEAWLRATLQRFAADVRDIEVSNTAEDSRGGAA*
Ga0137364_100075745	3300012198	Vadose Zone Soil	MSVHKAIDQIVEAFIPEMEKISKMKESEEQKERHYKAWLRATLQRFAADVRDIEVSKTAEDSRGGAA*
Ga0137364_101080521	3300012198	Vadose Zone Soil	MSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIA
Ga0137364_103000911	3300012198	Vadose Zone Soil	MSIQKAIDQIVEAFIPEMARISKMNESEEQKERHYKAWLRATLQKFADDVSEIATRNKAEDSYNHDAA*
Ga0137383_102226522	3300012199	Vadose Zone Soil	MSSINKTIDQIVEAFIPEMTKISKTNESEEQKERHYKAWLRASLQKFADDVRELAARNKEEDSHDNGAA*
Ga0137365_100233442	3300012201	Vadose Zone Soil	MSSINKAIDQIVEAFIPEMTKISKTNESEEQKERHYKAWLRASLQKFADDVRELAARNKEEDSHDNGAA*
Ga0137374_103043021	3300012204	Vadose Zone Soil	MSSINKAIDQIVEVFIPEMTKISKTNESEEQKERHYKAWLRASLQKFADDVRELAARNKEEDSHDNGAA*
Ga0137362_101597432	3300012205	Vadose Zone Soil	MSINKTIDQIVEAFIPEMRKISQTHESEGQKERHYKAWLRATLQKFADDVRKIAAHDKETDADGAT*
Ga0137380_102275292	3300012206	Vadose Zone Soil	VSRRAAETLAVEDRTMSIPKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVREIEASNKLEDTSKNGAA*
Ga0137376_106593092	3300012208	Vadose Zone Soil	MSIHKAIDQIVEAFIPEMERISRMNESEEQKERHYKAWLRATLQKFADEVREIEARNGAEGSRDHHAA*
Ga0137376_114358531	3300012208	Vadose Zone Soil	MSVHKAIDQIVEAFIPEMEKISKMKESEEQKERQYKAWLRATLQKFAADVRDIELSKTAEDSRGGAA*
Ga0137379_100282293	3300012209	Vadose Zone Soil	MSSINKAIDQIVEAFIPEMTKISKTNESEEQKERHYKAWLRASLQKFADDVRELAARNKEEDSHDNGTA*
Ga0137379_100599504	3300012209	Vadose Zone Soil	VSRRAAETVAVEDRTMSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLRKFAEDVREIEPSNKAEDTSKNGAP*
Ga0137378_101328282	3300012210	Vadose Zone Soil	VSRRAAETLAVEDRTMSIPKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVRKIEASNKAEDTSKNGAA*
Ga0137377_115171801	3300012211	Vadose Zone Soil	VSRRAAETVAVEDRTMSIHKAIDQIVEAFIPEMARISNMHEGEDQKERHYKAWLRATLQKFADDVLEIEASNKAEDTSKKGAA*
Ga0137386_102444022	3300012351	Vadose Zone Soil	MSSINKTIDQIVEAFIPEMTKISKTNESEEQKERHYKAWLRASLQKFADDVRELAARNKEEDSHDNGTA*
Ga0137386_112728141	3300012351	Vadose Zone Soil	MMSIHKAIDQIVEAFIPEVARISNMHEGEDQKERHYKAWLRATLQKFAEDVRKIEASNKAADTSKNGAA*
Ga0137371_104540031	3300012356	Vadose Zone Soil	MAIHKAIDQIVEAFIPEMEKISKMKESEEQKERHYKAWLRATLQRFAADVRDIEVSKTAEDSRGGAA*
Ga0137384_100594401	3300012357	Vadose Zone Soil	MSIHKAIDQIVEAFIPEMARISNMHESEDQKERYYKAWLRATLRKFAEDVREIEASNKAEDTSENGAA*
Ga0137385_101554452	3300012359	Vadose Zone Soil	VSRRAAETVAVEDRTMSIHKAIDQIVEAFIPEMARISNMHETEDQKERHYTLQKFAEDVREIEASNKAEDTSKKGAA*
Ga0137360_113810481	3300012361	Vadose Zone Soil	MSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVTKIAAHDTETDTHGAT*
Ga0137361_117573702	3300012362	Vadose Zone Soil	MSIHKAIDQIVEAFIPEMARISNTHESEDQKERHYKAWLRAALQKFAEDVREIESCNKAEDTGKNGAP*
Ga0137358_100193022	3300012582	Vadose Zone Soil	MSIHKTIDQIVEAFIPEMERISRMNESEEQKERHYKTWLRATLQKFADEVREIEARNGAEGSRDHHAA*
Ga0126375_100009906	3300012948	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMARISNMHETEDQKERQYKAWLRATLQRFAEDVRDIESRNKAEDAGKNGAS*
Ga0164300_103508421	3300012951	Soil	IVEAFIPEMERISRMDEGEEQKERHYKAWLRATLQKFADDVRGIAARNEAERSRDHHAA*
Ga0126369_100704281	3300012971	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMEKISRMDESEEQKERHYKAWLRATLQRFADEVREIEARNGAEGSR
Ga0126369_103643162	3300012971	Tropical Forest Soil	DQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDTEIDTDGAT*
Ga0134076_104612481	3300012976	Grasslands Soil	VSRRAAETLAVEDRTMSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVLEIEASNKAEGTSKNGAA*
Ga0134087_101547582	3300012977	Grasslands Soil	MSIHKAIDQIVEAFIPEMAKISNMHESEDQKERHYKAWLRATLQKFAEDVRKSEASNKAADTSKNGAA*
Ga0134078_105359261	3300014157	Grasslands Soil	VETLAVEDRTMSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVRKIEASNKAADTSKNGAA*
Ga0134073_100194052	3300015356	Grasslands Soil	VSRRAAETLAVEDRTMSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVREIEASNKAEDTSKKGAA*
Ga0132258_105999183	3300015371	Arabidopsis Rhizosphere	MSIHKAIDQIVEAFIPEMEKISRMHESEEQKERHYKAWLRATLQKFADDVREIEARDQAGGSRDHHAA*
Ga0132255_1051568632	3300015374	Arabidopsis Rhizosphere	AIDQIVEAFIPEMEKISRMHESEEQKERHYKAWLRATLQKFADDVREIEARDQAGGSRDHHAA*
Ga0182034_102729651	3300016371	Soil	MSINKTIDQIVEAFIPEMTKISKTNESEDQKERHYKAWLRATLQKFADDVTEIAARNEESDSYDNHAA
Ga0066655_100067674	3300018431	Grasslands Soil	MSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVRKIEASNKAADTSKNGAA
Ga0066667_100357222	3300018433	Grasslands Soil	MSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDKETDADGAT
Ga0066667_102590511	3300018433	Grasslands Soil	MMSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVREIEASNKAEDTSKKGAA
Ga0066662_109631492	3300018468	Grasslands Soil	MSIPKAIDQIVEAFIPEMARISNMHESEDQKERYYKAWLRATLQKFAEDVREIEASNKAEGTSKNGAA
Ga0066662_115082211	3300018468	Grasslands Soil	MSIHKAIDQIVEAFIPEMAKISNMHESEDQKERHYKAWLRATLQKFAEDVLEIEASNKAEGTSKNGAA
Ga0066669_101126352	3300018482	Grasslands Soil	MSIHKAIDRIVEAFIPEMEKISRMNESEEQKDRHYKAWLRATLQKFADDVREIEARNGAEGSRDHHAA
Ga0066669_108201962	3300018482	Grasslands Soil	EDRTMSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVRKIEASNKAADTSKNGAA
Ga0210407_113623811	3300020579	Soil	MSIHKAIDQIVEAFIPEMERISRMDEGEEQKERHYKAWLRATLQKFADDVREIEARNEAERSRDHHA
Ga0210406_101081571	3300021168	Soil	MSIHKAIDQIVEAFIPEMERISRMDEGEEQKERHYKAWLRATLQKFADDVREIEARNEAERSRDHHAA
Ga0213872_102672201	3300021361	Rhizosphere	MSINKTIDQIVEAFVPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDTETDPDDAT
Ga0126371_100920553	3300021560	Tropical Forest Soil	MSVNKMIDQIVEAFIPEMTKISKTSESEEQKERHYKAWLRATLQKFADDVRETAARDKEANGLE
Ga0126371_101812643	3300021560	Tropical Forest Soil	MSIHKAIDQIVEAFIPEMEKISRMDESEEQKERHYKAWLRATLQRFADEVREIEARNGAEGSRGHHAA
Ga0126371_115933551	3300021560	Tropical Forest Soil	MSINKMIDQIVEAFIPEMAKISKTNESEEQKERHYKAWLRATLQKFADDVRKSQPLNKEEDSPR
Ga0207684_101315051	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VRLGTHSMSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDKETDTDGAT
Ga0209154_12421951	3300026317	Soil	VRLGPHSMSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDKETDADGAT
Ga0209801_10954892	3300026326	Soil	MSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRAILQKFADDVRKIAAHDKETDADGAT
Ga0209377_12477321	3300026334	Soil	VRLGTHSMSINKTIDQIVEAFIPEMRKISQTHESEEQKERHYKAWLRATLQKFADDVRKIAAHDKETDADGAT
Ga0209378_11108162	3300026528	Soil	IVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVLEIEASNKAEGTSKNGAA
Ga0209378_11223882	3300026528	Soil	MSIHKAIDQIVEAFIPEMARISNMHESEDQKERHYKAWLRATLQKFAEDVRKIEASNKAA
Ga0209056_105382872	3300026538	Soil	AIDQIVEAFIPEMAKISNMHESEDQKERHYKAWLRATLQKFAEDVLEIEASNKAEGTSKNGAA
Ga0209577_105521382	3300026552	Soil	MSIHKAIDQIVEAFIPEMERISRMNESEEQKERHYKAWLRATLQKFADEAREIEARNGAEGSRDHHAA
Ga0209177_102181901	3300027775	Agricultural Soil	MSIHKAIDQIVEAFIPEMEKISRMHESEEQKERHYKAWLRATLQKFADDVRESEARGQAGGSRDHHAA
Ga0209814_101466762	3300027873	Populus Rhizosphere	MSVHKAIDQIVEAFIPEMERISKMKESEEQKERHYKAWLRATLQRFAADVRDIEVSNTAEDSRGGAA
Ga0307276_102156301	3300028705	Soil	MSIHKAIDQIVEAFIPEMERISRMNEGEEQKERHYKAWLRATLQKFADDVREIEARNEAERSRDHHA
Ga0307278_100078774	3300028878	Soil	MSIQKAIDQIVEAFIPEMAKISKTNESEEQKERHYKAWLRATLQKFADDVRGIAARSSEKNSH
Ga0307277_102282221	3300028881	Soil	MSIQKAIDQIVEAFIPEMAKISKTNESEEQKERHYKAWLRATLQKFADDVREIEARNEAERSRDHHAD
Ga0318541_103486861	3300031545	Soil	MSIHKAIDQIVETFIPEMERISKMNESEEKKERHYKAWLRATLQKFADDVRDIEKRNTAERPRDNDAV
Ga0306917_100926861	3300031719	Soil	AESLYCGAEGSQSMSINKTIDQIVEAFIPEMTKISKTNESEDQKERHYKAWLRATLQKFADDVMEIAARNEESDSYDNHAA
Ga0318551_106711971	3300031896	Soil	DQIVEAFIPEMTKISKTNESEEQKERHYKAWLRATLQKFADDVMKTAAHDKEMDSGGAT
Ga0306921_112704981	3300031912	Soil	SMSINKTIDQIVEAFIPEMTKISKTNESEDQKERHYKAWLRATLQKFADDVMEIAARNEESDSYDNHAA
Ga0310912_109770332	3300031941	Soil	MSINKTIDQIVEAFIPEMTKISKTNESEDQKERHYKAWLRATLQKFADDVMEIAARNEESDSYDNHAA
Ga0306926_110474461	3300031954	Soil	GPCARLSRSKQAAESLYCGAEGSQSMSINKTIDQIVEAFIPEMTKISKTNESEDQKERHYKAWLRATLQKFADDVMEIAARNEESDSYDNHAA
Ga0306920_1010546442	3300032261	Soil	MSSINKAIDQIVEAFIPEMTKISKTNESEEQKERHYKAWLRATLQKFADDVMKTAAHDKEMDSGGAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041127

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences