Metagenome / Metatranscriptome Family F041224

Basic Information
Family ID	F041224
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	76 residues
Representative Sequence	MSDRLLAGGVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYAGALAAWFFFTLAPLVAAAIILLMTRDDARTHV
Number of Associated Samples	126
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.62 %
% of genes near scaffold ends (potentially truncated)	20.62 %
% of genes from short scaffolds (< 2000 bps)	86.88 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Bacteria (65.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (7.500 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.875 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.73% β-sheet: 0.00% Coil/Unstructured: 43.27%
Feature Viewer

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Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF02566	OsmC	23.12
PF13590	DUF4136	14.38
PF07883	Cupin_2	2.50
PF13709	DUF4159	1.25
PF05545	FixQ	0.62
PF09537	DUF2383	0.62
PF02785	Biotin_carb_C	0.62
PF03544	TonB_C	0.62
PF01103	Omp85	0.62
PF04273	BLH_phosphatase	0.62
PF07732	Cu-oxidase_3	0.62
PF00108	Thiolase_N	0.62
PF12695	Abhydrolase_5	0.62
PF00990	GGDEF	0.62
PF04879	Molybdop_Fe4S4	0.62
PF10035	DUF2179	0.62
PF12704	MacB_PCD	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	23.12
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	23.12
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.62
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.62
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.62
COG3453	Predicted phosphohydrolase, protein tyrosine phosphatase (PTP) superfamily, DUF442 family	General function prediction only [R]	0.62
COG4736	Cbb3-type cytochrome oxidase, subunit 3	Energy production and conversion [C]	0.62

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.38 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	25.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.62 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.25 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.62 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.62 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.62 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.62 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.62 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.62 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.62 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.62 %
Hyphomicrobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	0.62 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.62 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886007\|SwRhRL2b_contig_1762533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100854455	All Organisms → cellular organisms → Bacteria	2559	Open in IMG/M
3300000559\|F14TC_101440387	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300000953\|JGI11615J12901_10187858	Not Available	1016	Open in IMG/M
3300003267\|soilL1_10037831	All Organisms → cellular organisms → Bacteria	7880	Open in IMG/M
3300003319\|soilL2_10032461	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M
3300003319\|soilL2_10069422	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300003324\|soilH2_10100162	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300003324\|soilH2_10101941	All Organisms → cellular organisms → Bacteria → Proteobacteria	2030	Open in IMG/M
3300004114\|Ga0062593_100035525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2909	Open in IMG/M
3300004114\|Ga0062593_100147241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1778	Open in IMG/M
3300004114\|Ga0062593_100169540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1689	Open in IMG/M
3300004114\|Ga0062593_100523494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300004114\|Ga0062593_100822860	Not Available	927	Open in IMG/M
3300004156\|Ga0062589_100158554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1565	Open in IMG/M
3300004157\|Ga0062590_101514954	Not Available	674	Open in IMG/M
3300004479\|Ga0062595_101461008	Not Available	627	Open in IMG/M
3300005093\|Ga0062594_101166641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300005093\|Ga0062594_101179172	Not Available	757	Open in IMG/M
3300005168\|Ga0066809_10117040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300005289\|Ga0065704_10132146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1616	Open in IMG/M
3300005289\|Ga0065704_10148393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1451	Open in IMG/M
3300005290\|Ga0065712_10568830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	578	Open in IMG/M
3300005293\|Ga0065715_10376159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300005295\|Ga0065707_10467977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300005329\|Ga0070683_100135449	All Organisms → cellular organisms → Bacteria → Proteobacteria	2332	Open in IMG/M
3300005331\|Ga0070670_101088251	Not Available	729	Open in IMG/M
3300005332\|Ga0066388_103264331	Not Available	829	Open in IMG/M
3300005332\|Ga0066388_107594479	Not Available	544	Open in IMG/M
3300005336\|Ga0070680_101151431	Not Available	670	Open in IMG/M
3300005338\|Ga0068868_101582384	Not Available	615	Open in IMG/M
3300005338\|Ga0068868_102221519	Not Available	523	Open in IMG/M
3300005341\|Ga0070691_10290800	Not Available	889	Open in IMG/M
3300005354\|Ga0070675_100495409	All Organisms → cellular organisms → Bacteria → Proteobacteria	1100	Open in IMG/M
3300005355\|Ga0070671_101033778	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300005364\|Ga0070673_100104211	All Organisms → cellular organisms → Bacteria	2342	Open in IMG/M
3300005365\|Ga0070688_101514814	Not Available	546	Open in IMG/M
3300005436\|Ga0070713_100349825	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300005440\|Ga0070705_100171519	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300005441\|Ga0070700_100860342	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005457\|Ga0070662_101337058	Not Available	617	Open in IMG/M
3300005459\|Ga0068867_101342833	Not Available	661	Open in IMG/M
3300005466\|Ga0070685_10222684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1237	Open in IMG/M
3300005468\|Ga0070707_100442729	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300005543\|Ga0070672_100090288	All Organisms → cellular organisms → Bacteria → Proteobacteria	2470	Open in IMG/M
3300005545\|Ga0070695_100049564	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300005546\|Ga0070696_100595405	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300005547\|Ga0070693_101003097	Not Available	632	Open in IMG/M
3300005577\|Ga0068857_100556900	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300005713\|Ga0066905_101774470	Not Available	568	Open in IMG/M
3300005764\|Ga0066903_109024664	Not Available	505	Open in IMG/M
3300005834\|Ga0068851_10718043	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300006032\|Ga0066696_10885494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300006046\|Ga0066652_100376790	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300006046\|Ga0066652_100502943	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300006358\|Ga0068871_101920410	Not Available	563	Open in IMG/M
3300006854\|Ga0075425_100007965	All Organisms → cellular organisms → Bacteria	11214	Open in IMG/M
3300006854\|Ga0075425_100098721	All Organisms → cellular organisms → Bacteria	3319	Open in IMG/M
3300006969\|Ga0075419_10774137	Not Available	685	Open in IMG/M
3300007076\|Ga0075435_102058728	Not Available	501	Open in IMG/M
3300009094\|Ga0111539_10894742	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300009094\|Ga0111539_11573604	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300009094\|Ga0111539_13168277	Not Available	530	Open in IMG/M
3300009147\|Ga0114129_11774052	Not Available	751	Open in IMG/M
3300009148\|Ga0105243_12106197	Not Available	600	Open in IMG/M
3300009162\|Ga0075423_10771646	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300009176\|Ga0105242_11503050	Not Available	704	Open in IMG/M
3300010038\|Ga0126315_10447899	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300010040\|Ga0126308_10912884	Not Available	612	Open in IMG/M
3300010047\|Ga0126382_10714682	Not Available	842	Open in IMG/M
3300010154\|Ga0127503_11006932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300010359\|Ga0126376_10650044	Not Available	1006	Open in IMG/M
3300010360\|Ga0126372_10863315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300010362\|Ga0126377_10585266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1159	Open in IMG/M
3300010362\|Ga0126377_11756516	Not Available	695	Open in IMG/M
3300010366\|Ga0126379_10401398	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300011119\|Ga0105246_10217537	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300011444\|Ga0137463_1077889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1243	Open in IMG/M
3300012469\|Ga0150984_108127963	Not Available	943	Open in IMG/M
3300012469\|Ga0150984_122837625	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300012912\|Ga0157306_10025074	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300012948\|Ga0126375_10638593	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300012951\|Ga0164300_10319771	Not Available	820	Open in IMG/M
3300012958\|Ga0164299_10792890	Not Available	675	Open in IMG/M
3300012960\|Ga0164301_10277265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1116	Open in IMG/M
3300012961\|Ga0164302_10745169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300013307\|Ga0157372_11877104	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300014262\|Ga0075301_1009418	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300014326\|Ga0157380_10491381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1190	Open in IMG/M
3300014745\|Ga0157377_11411550	Not Available	549	Open in IMG/M
3300014969\|Ga0157376_10487386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300015371\|Ga0132258_10847229	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300015371\|Ga0132258_11272536	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300015371\|Ga0132258_12230491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1374	Open in IMG/M
3300015371\|Ga0132258_12555873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1276	Open in IMG/M
3300015371\|Ga0132258_13094242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300015372\|Ga0132256_100098915	All Organisms → cellular organisms → Bacteria	2837	Open in IMG/M
3300015372\|Ga0132256_100342404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1588	Open in IMG/M
3300015372\|Ga0132256_100567275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1249	Open in IMG/M
3300015372\|Ga0132256_100638017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1180	Open in IMG/M
3300015372\|Ga0132256_102362394	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300015373\|Ga0132257_100493018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1502	Open in IMG/M
3300015373\|Ga0132257_104160322	Not Available	526	Open in IMG/M
3300015374\|Ga0132255_102264170	Not Available	829	Open in IMG/M
3300018083\|Ga0184628_10021324	All Organisms → cellular organisms → Bacteria	3191	Open in IMG/M
3300018476\|Ga0190274_10600771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1126	Open in IMG/M
3300018482\|Ga0066669_11805009	Not Available	565	Open in IMG/M
3300019356\|Ga0173481_10790969	Not Available	523	Open in IMG/M
3300019361\|Ga0173482_10325780	Not Available	686	Open in IMG/M
3300021082\|Ga0210380_10212431	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300021445\|Ga0182009_10000073	All Organisms → cellular organisms → Bacteria	15677	Open in IMG/M
3300021445\|Ga0182009_10014020	All Organisms → cellular organisms → Bacteria	2870	Open in IMG/M
3300021445\|Ga0182009_10029430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2178	Open in IMG/M
3300021445\|Ga0182009_10385137	Not Available	722	Open in IMG/M
3300021953\|Ga0213880_10013442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1716	Open in IMG/M
3300025271\|Ga0207666_1015470	All Organisms → cellular organisms → Bacteria → Acidobacteria	1087	Open in IMG/M
3300025315\|Ga0207697_10095926	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300025893\|Ga0207682_10564034	Not Available	538	Open in IMG/M
3300025908\|Ga0207643_10305978	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300025908\|Ga0207643_10547047	Not Available	743	Open in IMG/M
3300025916\|Ga0207663_11133551	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300025917\|Ga0207660_10880280	Not Available	731	Open in IMG/M
3300025917\|Ga0207660_10909985	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300025918\|Ga0207662_10202922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300025922\|Ga0207646_11888131	Not Available	509	Open in IMG/M
3300025926\|Ga0207659_10289119	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300025930\|Ga0207701_10683243	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300025930\|Ga0207701_11724769	Not Available	500	Open in IMG/M
3300025933\|Ga0207706_10655802	Not Available	898	Open in IMG/M
3300025937\|Ga0207669_11204193	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300025938\|Ga0207704_10496995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300025940\|Ga0207691_10124031	All Organisms → cellular organisms → Bacteria	2286	Open in IMG/M
3300025940\|Ga0207691_11535739	Not Available	543	Open in IMG/M
3300025944\|Ga0207661_10377290	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1283	Open in IMG/M
3300025945\|Ga0207679_10726060	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300025945\|Ga0207679_12132916	Not Available	509	Open in IMG/M
3300026016\|Ga0208779_1007603	Not Available	923	Open in IMG/M
3300026089\|Ga0207648_10283277	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300026118\|Ga0207675_102287886	Not Available	554	Open in IMG/M
3300026142\|Ga0207698_12336293	Not Available	546	Open in IMG/M
3300026325\|Ga0209152_10167898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	826	Open in IMG/M
3300027821\|Ga0209811_10126911	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	933	Open in IMG/M
3300028381\|Ga0268264_10004201	All Organisms → cellular organisms → Bacteria	12300	Open in IMG/M
3300028881\|Ga0307277_10400366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300030993\|Ga0308190_1031745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300031538\|Ga0310888_10136864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1291	Open in IMG/M
3300031547\|Ga0310887_10242682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300031740\|Ga0307468_101352824	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300031820\|Ga0307473_10042685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2083	Open in IMG/M
3300031940\|Ga0310901_10569702	Not Available	515	Open in IMG/M
3300031944\|Ga0310884_10693481	Not Available	615	Open in IMG/M
3300032075\|Ga0310890_11280513	Not Available	599	Open in IMG/M
3300032180\|Ga0307471_103265166	Not Available	575	Open in IMG/M
3300032205\|Ga0307472_102314211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300032205\|Ga0307472_102595749	Not Available	516	Open in IMG/M
3300032770\|Ga0335085_12336421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300033004\|Ga0335084_10383072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1450	Open in IMG/M
3300033412\|Ga0310810_10068684	All Organisms → cellular organisms → Bacteria	4284	Open in IMG/M
3300033475\|Ga0310811_10439928	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300034818\|Ga0373950_0062945	Not Available	748	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.38%
Host-Associated	Host-Associated	40.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.88%
Plants	Host-Associated → Plants	40.62%
Aquatic	Environmental → Aquatic	2.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.25%
Freshwater	Environmental → Aquatic → Freshwater	1.25%
Sediment	Environmental → Aquatic → Sediment	1.25%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.62%
Roots	Host-Associated → Plants → Roots	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.38%
Loam	Environmental → Terrestrial → Soil → Loam	14.37%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.62%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.62%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.12%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.12%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.25%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.62%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	3.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.12%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.12%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.25%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.25%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.25%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.25%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.62%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026016	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL2b_0988.00006440	2162886007	Switchgrass Rhizosphere	MSDRVLAGGVAAVIAILTLIQLLWMFGMFSPADALGGRDGALYASALAVWFLITLAPLVAAAIILLMTRGSDRWRMR
INPhiseqgaiiFebDRAFT_1008544554	3300000364	Soil	MSDRRLIGGVVAIAAVLTLVQLLWMFWMFSPADALAGRNGFVYAGMIAAWFWGTLGLLVAAAVILLMTSDDKTRS*
F14TC_1014403873	3300000559	Soil	MSERVLAGGVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFVTLAPLVAAAILLLMTRDDSRPRV*
JGI11615J12901_101878581	3300000953	Soil	MSDRLLAGGIAAVAAILTLVQLLWMFGMFSPAEALAGRTGFVYASMLAVWFLGTLALLVAAAVILLMAGDDTTGA*
soilL1_100378319	3300003267	Sugarcane Root And Bulk Soil	MSDRLVAGGVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYAGALAAWFFFTLAPLVAAAIILLMTRDDARTHV*
soilL2_100324612	3300003319	Sugarcane Root And Bulk Soil	MSDRLLAGGVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYAGALAAWFFFTLAPLVAAAIILLMTRDDARTHV*
soilL2_100694224	3300003319	Sugarcane Root And Bulk Soil	MSDRVLAGGIAAVIAFLTLIQLLWMFGMFSPADTLGGRNGALYASALAAWFLMTLAPLAAAAIVLLMTRR*
soilH2_101001622	3300003324	Sugarcane Root And Bulk Soil	MSHRLVVGALAAVVASLTLVQLLWMFGMFSPADALGGRDGAIYASALAAWFLITLAPLAAAAIILLMTRSDS*
soilH2_101019413	3300003324	Sugarcane Root And Bulk Soil	MTDRMLAGGVAAVVAALTLVQLLWMFGMFSPADALDGRNGFIYAGMIAAWFWGTLAILVAAAVILLMATDDRKHA*
Ga0062593_1000355255	3300004114	Soil	MSDRVLAGGVAAVIAFLTLIQLLWMFGMFSPADALGGRNGALYASALAVWFLITLAPLVAAAIILLMTRGSDRWTMR*
Ga0062593_1001472413	3300004114	Soil	MSDRLVVGALAAVVASLTLVQLLWMFGMFSPADALGGRNGAVYASALAAWFLITLAPLAATAIILLMTRSDS*
Ga0062593_1001695403	3300004114	Soil	MSDRLIAGGIATVAAILTLVQLLWMFGMFSPADALAGRNGALYASALAAWFFFTLAPLVAAAIILLMTRDDTMKHV*
Ga0062593_1005234942	3300004114	Soil	MSDRLLGGAMAAVGAALTLTQLVWMYRMFSPAAAVAGHNGAGFAMVLAAWFFFTLAPLAAAAIILLMTDHDVRA*
Ga0062593_1008228602	3300004114	Soil	MSDRLVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGALYASALAAWFFFTLAPLVAAAILLLMTRDDAKTHV*
Ga0062589_1001585542	3300004156	Soil	MSDRSVVGGIAAAAAILTLAQLLWMFGMFSPADALAGRTGFLYAGVIAAWFWGTLGLLVAAAVILLMTTNDKKRA*
Ga0062590_1015149542	3300004157	Soil	MSDRLVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGAVYASALAAWFFFTLAPLAAAAIILLMTRDDGTTHV*
Ga0062595_1014610082	3300004479	Soil	MSDRLLTGGVAAVAAVLTLVQLFWMFGMFSPADALAGRNGAIYASLLAAWFILTLALLVAAAVILLMATDDRKRT*
Ga0062594_1011666411	3300005093	Soil	MSDRLIGGGIAAVAAVLTLVQLLWLFGLFSPADALAGRTGFIYAGLLAAWFCGTFALLAAAAVILLMATDDET
Ga0062594_1011791722	3300005093	Soil	MSDRMLAGGVAGVAAILTLVQLLWMFGMFSPAEALAGRNGALYASALAAWFFFTLAPLVAAAIILLMTRNDAMMTR*
Ga0066809_101170401	3300005168	Soil	MTNRMLAGGLAGVAAILTLVQLVWMFGMFSPADALGGRNGAMYASMLAGWFVITFALLAAAALILLMTSDKTTRG*
Ga0065704_101321462	3300005289	Switchgrass Rhizosphere	MSDRVLAGGVAAVIAILTLIQLLWMFGMFSPADALGGRDGALYASALAVWFLITLAPLVAAAIILLMTRGSDRWRMR*
Ga0065704_101483934	3300005289	Switchgrass Rhizosphere	MSDRLVAGGVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYASALVAWFFFTLAPLVAAAIILLMTRDDTMKHV*
Ga0065712_105688301	3300005290	Miscanthus Rhizosphere	MSDRRLVGGVAAVAAILTFVQLLWMFGMFSPADALAGRAGFLYAGVIAAWLWGTLSLLVAVTVILLMTSNDTRRAETKARRSWTHS*
Ga0065715_103761593	3300005293	Miscanthus Rhizosphere	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFFALAPLVATAILLLMTRDDRTSHV*
Ga0065707_104679773	3300005295	Switchgrass Rhizosphere	MSDRLVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGAFYASALAAWFFFTLAPLVAAAIILLMTRDDARTFV*
Ga0070683_1001354494	3300005329	Corn Rhizosphere	MSDRRLVGGVAAVAAILTFVQLLWMFGMFSPADALAGRAGFLYAGVIAAWLWGTLSLLVAVTVILLMTSSDTRRAETNPRRSWTHS*
Ga0070670_1010882512	3300005331	Switchgrass Rhizosphere	MSDRRLVGGVAAVAAILTFVQLLWMFGMFSPADALAGRAGFLYAGVIAAWLWGTLGLLVAVTVILLMTSNDTRRAETKARRSWTHS*
Ga0066388_1032643313	3300005332	Tropical Forest Soil	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYASALVAWFFFTLAPLAAAAILLLMTRDGSSDSINKVMR*
Ga0066388_1075944791	3300005332	Tropical Forest Soil	MSDRLVAGSVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALVAWFFFTLAPLVAAAILLLMT
Ga0070680_1011514313	3300005336	Corn Rhizosphere	MSDRLIGGGIAAVAAVLTLVQLLWLFGLFSPADALAGRTGFIYAGLLAAWFCGTFALLAAAAVILLMATDDETHG*
Ga0068868_1015823841	3300005338	Miscanthus Rhizosphere	MSDRRLVGGVAAVAAILTFVQLLWMFGMFSPADAVAGRAGFLYAGVIAAWLWGTLSVLVAVTVILLMTSSDTRRAETNPRRSWTHS*
Ga0068868_1022215192	3300005338	Miscanthus Rhizosphere	MSDRLIAGGIATVAAILTLVQLLWMFGMFSPADALAGRNGALYASALAAWFFFTLAPLVAAAIILLMTRNDAMMTR*
Ga0070691_102908001	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	RLIGGGIAAVAAVLTLVQLLWLFGLFSPADALAGRTGFIYAGLLAAWFCGTFALLAAAAVILLMATDDETHG*
Ga0070675_1004954092	3300005354	Miscanthus Rhizosphere	MSDRRLVGGVAAVAAILTFVQLLWMFGMFSPADAVAGRAGFLYAGVIAAWLWGTLSLLVAVTVILLMTSSDTRRAETNPRRSWTHS*
Ga0070671_1010337781	3300005355	Switchgrass Rhizosphere	MSDRLVTGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGAAYAIALVAWFFCTLGPLVAAAIILLM
Ga0070673_1001042114	3300005364	Switchgrass Rhizosphere	MSDRLVGGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGAVYAIALVGWFFVTLAPLVAAAIILLMTRDESPTHA*
Ga0070688_1015148141	3300005365	Switchgrass Rhizosphere	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFFTLAPLVAAAILLLMTRDDAKTHA*
Ga0070713_1003498251	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSDRFVSGAVALVAAVLTLMQLLWMFGMFSPAAAVDGHNGAGYAMLLAAWFFFTLAPLMAAAIILLMTRDDARA*
Ga0070705_1001715193	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASAVAAWFFFTLAPLVATAILLLMTRDDRTSHV*
Ga0070700_1008603421	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSDRLLTGGVAAVAAVLTLVQLFWMFGMFSPAEALAGRNGAVYASLLAAWFILTLALLVAAAVILLMATDDRKRT*
Ga0070662_1013370581	3300005457	Corn Rhizosphere	MSDRLIAGGIATVAAILTLVQLLWMFGMFSPADALGGRNGAFYASALAAWFFFTLAPLVAAAIILLMTRDDARTFV*
Ga0068867_1013428332	3300005459	Miscanthus Rhizosphere	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFFTLAPLVATAILLLMTRDDRTSHV*
Ga0070685_102226843	3300005466	Switchgrass Rhizosphere	MSDRLIAGGIATVAAILTLVQLLWMFGMFSPADALAGRNGALYASALAAWFFFTLAPLVATAILLLMTRDDRTSHV*
Ga0070707_1004427293	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTDRALAGAVAAVVAVLTLVQLLWMFGMFSPADALAGRTGAFYAGVLAVWFLGTLGLLVAAAVILLMTTDDTTRAETSGGV*
Ga0070672_1000902885	3300005543	Miscanthus Rhizosphere	MSDRLLAGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGAVYAITLVAWFFCTLGPLVAAAIILLMTRDESPTHV*
Ga0070695_1000495641	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	TGGVAAVAAVLTLVQLFWMFGMFSPAEALAGRNGAVYASLLAAWFILTLALLVAAAVILLMATDDRKRT*
Ga0070696_1005954051	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSARVLAGGVAAVIAILTLIQLLWMFGMFPPADALAGRNGALYASALAAWFLITLAPLVAMAIILLMTRDRRWRTR*
Ga0070693_1010030972	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSDRLVAGAVAAVAAILTLVQLLWMFGMFSPAEALAGRNGALYASALAAWFFFTLAPLVAAAIILLMTRNDAMMTR*
Ga0068857_1005569002	3300005577	Corn Rhizosphere	MSDRFVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGALFASALAAWFFFTLAPLVAAAILLLMTRDGSSESEYGDDPTHASAVRM*
Ga0066905_1017744702	3300005713	Tropical Forest Soil	MSGRLLAGGVAAVAAILTLIQLLWMFGMFSPADALAGRNGALYASALVAWFFFTLAPLVAAAIILLMTRDDARTHV*
Ga0066903_1090246641	3300005764	Tropical Forest Soil	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYASALVAWFFFTLAPLVAAAILLLMTRDDAKTHV*
Ga0068851_107180431	3300005834	Corn Rhizosphere	FHFSTSVREGAMSDRLVAGGVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFFALAPLVATAILLLMTRDDRTSHV*
Ga0066696_108854942	3300006032	Soil	MSDRFVGGAVAAVAAILTLVQLLWMFGMFSPAAAIDGHNGAGYAMLLAAWLFFTLAPLVAGAIILLMTREDAHA*
Ga0066652_1003767903	3300006046	Soil	MSDRRLVGGIAAVAAILTLVQLLWMFGMFSPADALGGRTGAPFAGMLAVWFLGTLALLVAAAIILLMTTADKTRT*
Ga0066652_1005029431	3300006046	Soil	MTDRRLIGGVIAVAALLTLVQLLWMFGMFSPADALAGRTGFFYAGMIAAWFWATLALLVAAAVILLM
Ga0068871_1019204101	3300006358	Miscanthus Rhizosphere	MSDRLVGGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGAVYAIALVAWFFFTLGPLVAAAIILLMTRDESPAHV*
Ga0075425_10000796512	3300006854	Populus Rhizosphere	MSDRSVVGGIAAAAAILTLAQLLWMFGMFSPADALAGRTGFLYAGVIAAWFWGTLGLLVAAAVILLMTPNDKKRA*
Ga0075425_1000987216	3300006854	Populus Rhizosphere	MSDRLLAGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGAAYAIALVAWFFCTLGPLVAAAIILLMTRDESPTHV*
Ga0075419_107741372	3300006969	Populus Rhizosphere	MSDRLVAGGVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYASALAAWFFFTLAPLAAAAIILLMTRDDAATHG*
Ga0075435_1020587282	3300007076	Populus Rhizosphere	MSDRRLIGGVAVVAAILTLVQLLWMFGMFSPADALAGRNGFMYAGLIAAWFWGTLGLLVAAAVILLMTSDDTART*
Ga0111539_108947421	3300009094	Populus Rhizosphere	MSDRLIAGGIATVAAILTLVQLLWMFGMFSPADALAGRNGALYASALAAWFFFTLAPLVAAAIILLMTRDDTMKH
Ga0111539_115736041	3300009094	Populus Rhizosphere	MSDRLVAGGVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYASALVAWFFFTLAPLAAAA
Ga0111539_131682772	3300009094	Populus Rhizosphere	MSDRVLAGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGALYASALAAWFFITLAPLVAAAILLLMTRDDTKTRA*
Ga0114129_117740521	3300009147	Populus Rhizosphere	MSDRLVAGGVATVAAILTLVQLLWMFGMFSPAEALAGRNGALYASALAAWFFFTLAPLVAAAIILLMTRDDTMKHV*
Ga0105243_121061972	3300009148	Miscanthus Rhizosphere	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFITLAPLVAAAILLLMTRDDTKTRA*
Ga0075423_107716461	3300009162	Populus Rhizosphere	GGVAAVIAILTLIQLLWMFGMFPPADALAGRNGALYASALAAWFLITLAPLVAMAIILLMTRDRRWRTR*
Ga0105242_115030501	3300009176	Miscanthus Rhizosphere	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRDGAVYAITLVAWFFCTLGPLVAAAIILLMTRDESPAHV*
Ga0126315_104478992	3300010038	Serpentine Soil	MTDRTLAGGVAAVAAILTLLQLLWMFGMFSPADALGGRNGFVYASMIAAWFWGTLGLLVSAAVILLMTSDDKSRT*
Ga0126308_109128842	3300010040	Serpentine Soil	MPNRLLAGGVAAVAGILTLTQLLWMFGMFSPADALGGRNGAVYASALAAWFFFTLAPLVVGTIILLMTREEAEVMR*
Ga0126382_107146821	3300010047	Tropical Forest Soil	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALAGRNGALYASALAAWFFVTLAPLVAAAILLLMTRDDTTSHV*
Ga0127503_110069321	3300010154	Soil	LIRMLAGGLASVAAILTLVQLVWMFGMFSPADALGGRNGAMYASMLAGWFVITFALLAAAALILLMTSDKTTRA*
Ga0126376_106500442	3300010359	Tropical Forest Soil	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYASALVAWFFFTLAPLVAAAILLLMTRDGSSKSINEVMR*
Ga0126372_108633152	3300010360	Tropical Forest Soil	MSGRLLAGGVAAVAAILTLIQLLWMFGMFSPADVLGGRNGALYASALVAWFFFTLAPLVAAAIILLMTRDDAKTHV*
Ga0126377_105852661	3300010362	Tropical Forest Soil	MSGRLLAGGVAAVAAILTLIQLLWMFGMFSPADALAGRNGALYASALVAWFFFTLAPLVAAAIILLMTRNDARTHV*
Ga0126377_117565162	3300010362	Tropical Forest Soil	MSVRVLAGTVAVVAAILTLIQLLWMFGMFSPADALGGRDGALYASALAAWFLVTLAPLVAVAIILLMTRDDIRP*
Ga0126379_104013983	3300010366	Tropical Forest Soil	MSDRLVGGGVAAIAAILTLVQLLWMFGMFSPADALGGRDGAVYAIALVGWLFCTLGPLVAVAIILLMTRDGSPTHV*
Ga0105246_102175373	3300011119	Miscanthus Rhizosphere	MSDRLIAGGIATVAAILTLVQLLWMFGMFSPADALGGRNGALYASALAAWFFFTLAPLVAAAILLLMTRDDAKTHA*
Ga0137463_10778893	3300011444	Soil	MTNRMLAGGLAGVAAILTLVQLVWMFGMFSPADALSGRNGAMYASMLAGWFVVTFALLAAAAVILLMTSDKTTRA*
Ga0150984_1081279633	3300012469	Avena Fatua Rhizosphere	MTDRRLIGGVIAVAALLTLVQLLWMFGMFSPADALAGRTGFFYAGMIAAWFWGTLALLVAAAVILLMTTNDNTSTPRAKEMERTR*
Ga0150984_1228376253	3300012469	Avena Fatua Rhizosphere	PMSDRLLAGGFATVAAVLTLVQLLWMFGMFSPADALDGRNGAVYASLVAACLFFTLAPLVAAAVILLMTDGNKRA*
Ga0157306_100250741	3300012912	Soil	MSDRLIAGGIATVAAILTLVQLLWMFGMFSPADALAGRNGALYASALAAWFFFTLAPLVAAAIILLM
Ga0126375_106385931	3300012948	Tropical Forest Soil	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYASALVAWFFFTLAPLVAAAI
Ga0164300_103197713	3300012951	Soil	LAGGIAAVAAILTLIQLLWMFGIFSPADALGGRNGAAYAIALVAWFFCTLGPLVAAAIILLMTRDESPTHV*
Ga0164299_107928902	3300012958	Soil	MSDRLVTGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGAAYAIALVAWFFCTLGPLVAAAIILLMTRDESPTHV*
Ga0164301_102772653	3300012960	Soil	MSDRLVTGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGAAYAIALVAWFFCTLGPLVAAAIILLMTRDQSPTHV*
Ga0164302_107451691	3300012961	Soil	AVAAILTLVQLLWMFGMFSPADALGGRNGAAYAIALVAWFFFTLGPLVAAAIILLMTRDESPTHV*
Ga0157372_118771042	3300013307	Corn Rhizosphere	MSDRMLAGGVAGVAAILTLVQLLWMFGMFSPADALGGRNGALYASALAAWFFFTLAPLVATAILLLMTRDDRTSHV*
Ga0075301_10094183	3300014262	Natural And Restored Wetlands	MSGRVLAGGIAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFITLAPLAAAAIILLMTRGDTRPHA*
Ga0157380_104913813	3300014326	Switchgrass Rhizosphere	MSDRLVAGGVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYASAPVAWFFFTLAPLVAAAIILLMTRDDTMKHV*
Ga0157377_114115501	3300014745	Miscanthus Rhizosphere	MSDRLLAGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGAVYAITLVAWFFCTLGPLVAAAIVLLMTRDESPAHV*
Ga0157376_104873861	3300014969	Miscanthus Rhizosphere	TEAREVAMSDRLVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGAFYASALAAWFFFTLAPLVAAAIILLMTRDDARTFV*
Ga0132258_108472293	3300015371	Arabidopsis Rhizosphere	MSDRLLAGGLVTVAAVLTLVQLLWMFGMFSPADALAGRNGAVYASLVAAWFFFTLAPLVAAAVILLMTDDNTHA*
Ga0132258_112725362	3300015371	Arabidopsis Rhizosphere	MSDRLLTGGVVAVAAVLTLVQLLWMFGMFSPADALAGRNGAVYASLLAAWFILTLALLVAAAVILLMATDDRTRESGK*
Ga0132258_122304913	3300015371	Arabidopsis Rhizosphere	MSDRMLVGGVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYAGALVAWFFFTLAPLVAAAILLLMTREAKQ*
Ga0132258_125558734	3300015371	Arabidopsis Rhizosphere	REVAMSDRLVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGAFYASALAAWFFFTLAPLVAAAIILLMTRDDARTFV*
Ga0132258_130942421	3300015371	Arabidopsis Rhizosphere	MSHRLVVGALAAVVASLTLVQLLWMFGMFSPADALGGRNGAVYASALAAWFLITLAPLAAAAIILLMTRSDRDKSRWSMR*
Ga0132256_1000989154	3300015372	Arabidopsis Rhizosphere	MSDRLVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGAFYASALAAWFFFTLAPLVAAAIILLMTRDDAKTFV*
Ga0132256_1003424041	3300015372	Arabidopsis Rhizosphere	PMSDRSVVGGIAAAAAILTLAQLLWMFGMFSPADALAGRTGFLYAGVIAAWFWGTLGLLVAAAVILLMTTNDKKRA*
Ga0132256_1005672752	3300015372	Arabidopsis Rhizosphere	MSDRMLVGGVAAVAAILTLIQLLWLFGMFSPADALGGRNGALYAGALVAWFFFTLAPLVAAAILLLMTREAKQ*
Ga0132256_1006380174	3300015372	Arabidopsis Rhizosphere	VAAVIAILTLIQLLWMFGMFSPADALGGRDGALYASALAVWFLITLAPLVAAAIILLMTRGSDRWRMR*
Ga0132256_1023623942	3300015372	Arabidopsis Rhizosphere	MSDRLLTGGVAAVAALLTLVQLLWMFGMFSPADALAGRNGAVYASMLAVWFILTLALLVAAAVILLMATDDRTRESGE*
Ga0132257_1004930182	3300015373	Arabidopsis Rhizosphere	MSDRLLAGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGAAYAIALVAWFFCTLGPLVAAAIILLMTRDESPAHV*
Ga0132257_1041603222	3300015373	Arabidopsis Rhizosphere	VINLLRRFAMTDRMLAGGVAAVVAALTFVQLLWMFGMFSPADALAGRTGFFYAGMIAAWFWGTLAILVAAALILLMATEDKQHA*
Ga0132255_1022641702	3300015374	Arabidopsis Rhizosphere	MSDRLLTGGVVAVAAVLTLVQLLWMFGMFSPADALAGRNGAVYASLLAVWFILTLALLVAAAVILLMATDDRTRESGE*
Ga0184628_100213241	3300018083	Groundwater Sediment	MTNRMLAGGLAGVAAILTLVQLVWMFGMFSPADALSGRNGAMYASMLAGWFVVTFALLVAAALILLMTSDKTTRP
Ga0190274_106007712	3300018476	Soil	MSDRILIGAGAAVTAILTLVQLLWMFGMFSPARAVAGQDGAFPAILIAAWFWLSFAVLVAAAVILLMARNEAPRRR
Ga0066669_118050091	3300018482	Grasslands Soil	MSDRRLVGGIAAVAAILTLVQLLWMFGMFSPADALGGRTSAPFAGMLAVWFLGTLALLVAAAIILLMTTADKTDVTEERSRRR
Ga0173481_107909691	3300019356	Soil	MSDRLIAGGIATVAAILTLVQLLWMFGMFSPADALAGRNGALYASALAAWFFFTLAPLVAAAI
Ga0173482_103257802	3300019361	Soil	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYASALAAWFLITLAPLAATAIILLMTRSDS
Ga0210380_102124312	3300021082	Groundwater Sediment	MTNRMLAGGLAGVAAILTLVQLVWMFGMFSPADALSGRNGAMYASMLAGWFVVTFALLVAAALILLMTSDKTTRG
Ga0182009_100000737	3300021445	Soil	MSDRSVVGGIAAAAAILTLAQLLWMFGMFSPADALAGRTGFLYAGVIAAWFWGTLGLLVAAAVILLMTTNDKKRA
Ga0182009_100140204	3300021445	Soil	MSDRLVGGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGAVYAIALVGWFFVTLAPLVAAAIILLMTRDESPTHA
Ga0182009_100294301	3300021445	Soil	MSDRRLVGGVAAVAAILTFVQLLWMFGMFSPADALAGRAGFLYAGVIAAWLWGTLSLLVAATVILLMTSDDTQRA
Ga0182009_103851371	3300021445	Soil	MSDRRLVGGVAAMAAILTLVQLLWMFGMFSPADALGGRNGFLYAGMIAAWFWGTLGLLVAAAVILLMTADDTTHA
Ga0213880_100134422	3300021953	Exposed Rock	MSDRYIAGAVAAVAAILTLMQLLWMFGMFSPAAAIDGHNGAGYAMLLAAWFFFTLAPLVAAAIILLMTNDVRA
Ga0207666_10154702	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MSDRLVAGGVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYASALVAWFFFTLAPLVAAAIILLMTRDDTMKHV
Ga0207697_100959262	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MSDRLVAGGVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYAITLVAWFFCTLGPLVAAAIILLMTRDESPTHV
Ga0207682_105640341	3300025893	Miscanthus Rhizosphere	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYASALVAWFFFTLAPLVAAAIILLMTRDDTMKHV
Ga0207643_103059782	3300025908	Miscanthus Rhizosphere	MSDRLIAGGIATVAAILTLVQLLWMFGMFSPADALAGRNGALYASALAAWFFFTLAPLVAAAIILLMTRDDTMKHV
Ga0207643_105470472	3300025908	Miscanthus Rhizosphere	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFFTLAPLVAAAILLLMTRDDAKTHA
Ga0207663_111335511	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSDRFVGGAVALVAAVLTLMQLLWMFGMFSPAAAVGGHNGAGYAMLLAAWFFFTLAPLMAAAI
Ga0207660_108802801	3300025917	Corn Rhizosphere	MSDRLIGGGIAAVAAVLTLVQLLWLFGLFSPADALAGRTGFIYAGLLAAWFCGTFALLAAAAVILLMATDDETHG
Ga0207660_109099851	3300025917	Corn Rhizosphere	MSDRLLTGGVAAVAAVLTLVQLFWMFGMFSPADALAGRNGAIYASLLAAWFILTLALLVAAAVILLMATDDRKRT
Ga0207662_102029222	3300025918	Switchgrass Rhizosphere	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFFALAPLVATAILLLMTRDDRTSHV
Ga0207646_118881311	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTDRALAGAVAAVVAVLTLVQLLWMFGMFSPADALAGRTGAFYAGVLAVWFLGTLGLLVAAAVILLMTTDDTTRAETSGGV
Ga0207659_102891191	3300025926	Miscanthus Rhizosphere	MSDRRLVGGVAAVAAILTFVQLLWMFGMFSPADAVAGRAGFLYAGVIAAWLWGTLSLLVAVTVILLMTSSDTRRAETNPRRSWTHS
Ga0207701_106832431	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSDRLLAGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGAVYAITLVAWFFCTLGPLVAAAIILLMTRDESPTH
Ga0207701_117247691	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSDRRLVGGVAAVAAILTFVQLLWMFGMFSPADAVAGRAGFLYAGVIAAWLWGTLSLLVAVTVILLMTSNDTRRA
Ga0207706_106558021	3300025933	Corn Rhizosphere	MSDRLVVGALAAVVASLTLVQLLWMFGMFSPADALGGRNGAVYASALAAWFLITLAPLAATAII
Ga0207669_112041933	3300025937	Miscanthus Rhizosphere	MSDRLLTGGVAAVAAVLTLVQLFWMFGMFSPAEALAGRNGAVYASLLAAWFILTLALLVAAAVILLMATDDRKRT
Ga0207704_104969953	3300025938	Miscanthus Rhizosphere	AMSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFFTLAPLVATAILLLMTRDDRTSHV
Ga0207691_101240313	3300025940	Miscanthus Rhizosphere	MSDRRLVGGVAAVAAILTFVQLLWMFGMFSPADAVAGRAGFLYAGVIAAWLWGTLSVLVAVTVILLMTSSDTRRAETNPRRSWTHS
Ga0207691_115357391	3300025940	Miscanthus Rhizosphere	MSDRLLAGGVAAVAAILTLVQLLWMFGMFSPADALGGRNGAVYAITLVAWFFCTLGPLVAAAIILLMTRDESPTHV
Ga0207661_103772902	3300025944	Corn Rhizosphere	MSDRRLVGGVAAVAAILTFVQLLWMFGMFSPADALAGRAGFLYAGVIAAWLWGTLSLLVAVTVILLMTSSDTRRAETNPRRSWTHS
Ga0207679_107260601	3300025945	Corn Rhizosphere	MSDRVLAGGVAAVIAFLTLIQLLWMFGMFSPADALGGRNGALYASALAVWFLITLAPLVAAAIILLMTRGSDRWTMR
Ga0207679_121329162	3300025945	Corn Rhizosphere	GVAAVAAILTLVQLLWMFGMFSPADALGGRNGAVYAIALVGWFFVTLAPLVAAAIILLMTRDESPTHA
Ga0208779_10076032	3300026016	Natural And Restored Wetlands	MSGRVLAGGIAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFITLAPLAAAAIILLMTRGDTRPHA
Ga0207648_102832772	3300026089	Miscanthus Rhizosphere	MSDRLLTGGVAAVAAVLTLVQLCWMFGMFSPAEALAGRNGAVYASLLAAWFILTLALLVAAAVILLMATDDRKRT
Ga0207675_1022878862	3300026118	Switchgrass Rhizosphere	VSSYRGTAERPERAMAVAAVVAILTLIQLLWMFGMFSPADALGGRDGALYASALAVWFLITLAPLVAAAIILLMTRGSDRWTMR
Ga0207698_123362932	3300026142	Corn Rhizosphere	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFFALAPLVATAILLLMTRDDRTSHL
Ga0209152_101678981	3300026325	Soil	MSDRLLAGGFATVAAVLTLVQLLWMFGMFSPADALDGRNGAVYASLVAACLFFTLAPLVAAAVILLMTDGNKRA
Ga0209811_101269112	3300027821	Surface Soil	MKLSVPATWAAILTLVQLVWMFGMFSPADALGGRNGAMYASMLAGWFVVTFALLAAAALILLMTSDRTTRG
Ga0268264_100042013	3300028381	Switchgrass Rhizosphere	MSDRLVAGAVAAVAAILTLIQLLWMFGMFSPADALGGRNGALYASALAAWFFFTLAPLVATAILLLMTRDDRTSHV
Ga0307277_104003662	3300028881	Soil	MTHRMLAGGLAGVAAILTLVQLVWMFGMFSPADAVGGRNGAMYASMLAGWFVVTFALLGAAALILLMTSDKTTRT
Ga0308190_10317453	3300030993	Soil	TNRMLAGGLAGVAAILTLVQLVWMFGMFSPADALGGRNGAMYASMLAGWFVVTFALLVAAALILLMTSDKTTRP
Ga0310888_101368644	3300031538	Soil	VAAVAAILTLIQLLWMFGMFSPADALGGRNGAVYASALVAWFFFTLAPLVAAAIILLMTRDDTMKHV
Ga0310887_102426821	3300031547	Soil	MSDRLVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGAFYASALAAWFFFTLAPLVAAAIILLMTRDDARTFV
Ga0307468_1013528241	3300031740	Hardwood Forest Soil	AVAAILTLVQLLWMFGMFSPAEALAGRTGFVYASMLAVWFLGTLALLVAAAVILLMAGDDTTGA
Ga0307473_100426854	3300031820	Hardwood Forest Soil	MSDRLLAGGIAAVAAILTLVQLLWMFGMFSPAEALAGRTGFVYASMLAVWFLGTLALLVAAAVILLMAGDDTTGA
Ga0310901_105697022	3300031940	Soil	GSVAAVAAILTLVQLLWMFGMFSPADALGGRNGAFYASALAAWFFFTLAPLVAAAIILLMTRDDARTFV
Ga0310884_106934811	3300031944	Soil	MSDRLVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGALYASALAAWFFFTLAPLVAAAILLLMTRDDAKTHA
Ga0310890_112805131	3300032075	Soil	MSDRLVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGAFYASALAAWFFFTLAPLVAAAIILLMTRD
Ga0307471_1032651662	3300032180	Hardwood Forest Soil	MSNRLLTGGVAAVAALLTLVQLLWMFGMFSPADALAGRTGAVYASLIAAWFFLTLAPLVAVALILLMATDDRTHS
Ga0307472_1023142112	3300032205	Hardwood Forest Soil	MSNRLIAGGIAAVVAVLTLVQLLWMFGMFSPADALAGRNGAVYACLLAVWFILTLALLVAAAVILLMATDDRTRESGE
Ga0307472_1025957491	3300032205	Hardwood Forest Soil	MSDRVLAGGVAAVIAILTLIQLLWMFGMFSPAEALAGRTGFVYASMLAVWFLGTLALLVAAAVILLMAGDDTTGA
Ga0335085_123364211	3300032770	Soil	MSDRFVGGAVAAVAAILTLMQLLWMFGMFSPAAALDGRNGAGYAMLLAAWFFFTLGPLVAAAITLLALRTNARA
Ga0335084_103830723	3300033004	Soil	MSDRFVGGAVAAVAAILTLMQLLWMFGMFSPAAALDGHNGAGYAMLLAAWFFFTLGPLVAAAIIFLTLRSDARA
Ga0310810_100686843	3300033412	Soil	MSDRFVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGALFASALAAWFFFTLAPLVAAAILLLMTRDGSSESEYGDDPTHASAVRM
Ga0310811_104399281	3300033475	Soil	MSDRFVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGALFASALAAWFFFTLAPLVAAAILLLMTRDGSS
Ga0373950_0062945_75_305	3300034818	Rhizosphere Soil	MSDRLVAGAVAAVAAILTLVQLLWMFGMFSPADALGGRNGAFYASALAAWFFFTLAPLVAAAILLLMTRDDAKTHA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041224

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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