Metagenome / Metatranscriptome Family F041312

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041312
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	50 residues
Representative Sequence	MNRPKNFRVYFLLAALAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNVT
Number of Associated Samples	116
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.62 %
% of genes near scaffold ends (potentially truncated)	97.50 %
% of genes from short scaffolds (< 2000 bps)	81.88 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (40.625 % of family members)
Environment Ontology (ENVO)	Unclassified (35.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.77% β-sheet: 0.00% Coil/Unstructured: 58.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF00793	DAHP_synth_1	12.50
PF01435	Peptidase_M48	10.00
PF02129	Peptidase_S15	3.75
PF00072	Response_reg	3.12
PF00903	Glyoxalase	3.12
PF12867	DinB_2	2.50
PF08308	PEGA	2.50
PF00027	cNMP_binding	1.88
PF12681	Glyoxalase_2	1.88
PF00581	Rhodanese	1.25
PF13545	HTH_Crp_2	1.25
PF00501	AMP-binding	0.62
PF13637	Ank_4	0.62
PF03795	YCII	0.62
PF00400	WD40	0.62
PF07228	SpoIIE	0.62
PF12796	Ank_2	0.62
PF13620	CarboxypepD_reg	0.62
PF07238	PilZ	0.62
PF10067	DUF2306	0.62
PF01904	DUF72	0.62
PF01757	Acyl_transf_3	0.62
PF12762	DDE_Tnp_IS1595	0.62
PF00753	Lactamase_B	0.62
PF14200	RicinB_lectin_2	0.62
PF05973	Gp49	0.62
PF00857	Isochorismatase	0.62
PF08530	PepX_C	0.62
PF03683	UPF0175	0.62
PF01545	Cation_efflux	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.62
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.62
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.62
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.62
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.62
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.62
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.62
COG2936	Predicted acyl esterase	General function prediction only [R]	0.62
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.62
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.62
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.00 %
Unclassified	root	N/A	15.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.00 %
Unclassified	root	N/A	15.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.00 %
Unclassified	root	N/A	15.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	52.50 %
Unclassified	root	N/A	15.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.50 %
Unclassified	root	N/A	15.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.38 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.50 %
Unclassified	root	N/A	15.00 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.75 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.50 %
Unclassified	root	N/A	15.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.75 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.62 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.50 %
Unclassified	root	N/A	15.00 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.62 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.50 %
Unclassified	root	N/A	15.00 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.62 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.62 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.50 %
Unclassified	root	N/A	15.00 %
Granulicella sp. L46	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	0.62 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.62 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10137886	Not Available	947	Open in IMG/M
3300001154\|JGI12636J13339_1013644	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300001356\|JGI12269J14319_10299928	Not Available	580	Open in IMG/M
3300001593\|JGI12635J15846_10580424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300002908\|JGI25382J43887_10453027	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300002914\|JGI25617J43924_10116610	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300002914\|JGI25617J43924_10233432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300005167\|Ga0066672_10977564	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300005174\|Ga0066680_10478373	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300005176\|Ga0066679_10106648	All Organisms → cellular organisms → Bacteria → Acidobacteria	1710	Open in IMG/M
3300005177\|Ga0066690_10329232	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300005180\|Ga0066685_10045061	All Organisms → cellular organisms → Bacteria	2812	Open in IMG/M
3300005450\|Ga0066682_10412730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300005541\|Ga0070733_10032588	All Organisms → cellular organisms → Bacteria → Acidobacteria	3249	Open in IMG/M
3300005554\|Ga0066661_10267958	All Organisms → cellular organisms → Bacteria → Acidobacteria	1055	Open in IMG/M
3300005555\|Ga0066692_10198404	All Organisms → cellular organisms → Bacteria → Acidobacteria	1255	Open in IMG/M
3300005560\|Ga0066670_10755027	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300005568\|Ga0066703_10364925	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300005586\|Ga0066691_10904539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300005602\|Ga0070762_10287909	Not Available	1032	Open in IMG/M
3300006034\|Ga0066656_10533480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300006052\|Ga0075029_101083513	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300006162\|Ga0075030_100713421	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300006176\|Ga0070765_101740274	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300006755\|Ga0079222_10432079	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300006796\|Ga0066665_10997415	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300006797\|Ga0066659_10182580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1521	Open in IMG/M
3300006797\|Ga0066659_10414453	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300007258\|Ga0099793_10182686	All Organisms → cellular organisms → Bacteria → Acidobacteria	1002	Open in IMG/M
3300007265\|Ga0099794_10013151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3595	Open in IMG/M
3300007265\|Ga0099794_10242498	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300007265\|Ga0099794_10603933	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300007265\|Ga0099794_10728143	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300009012\|Ga0066710_101638784	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300009012\|Ga0066710_102577358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300009038\|Ga0099829_10146257	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300009038\|Ga0099829_10199800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1617	Open in IMG/M
3300009088\|Ga0099830_11230867	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300009137\|Ga0066709_104169307	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300009137\|Ga0066709_104657727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300009524\|Ga0116225_1066404	Not Available	1706	Open in IMG/M
3300009549\|Ga0116137_1057681	Not Available	1236	Open in IMG/M
3300010043\|Ga0126380_11155311	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300010046\|Ga0126384_10102713	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300010320\|Ga0134109_10112008	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300010321\|Ga0134067_10008842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2813	Open in IMG/M
3300010337\|Ga0134062_10077386	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300010362\|Ga0126377_10962759	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300010398\|Ga0126383_12386491	Not Available	614	Open in IMG/M
3300011120\|Ga0150983_13011654	Not Available	857	Open in IMG/M
3300011269\|Ga0137392_10061179	All Organisms → cellular organisms → Bacteria → Acidobacteria	2866	Open in IMG/M
3300011269\|Ga0137392_10531207	All Organisms → cellular organisms → Bacteria → Acidobacteria	977	Open in IMG/M
3300011269\|Ga0137392_11305256	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300011271\|Ga0137393_10108337	All Organisms → cellular organisms → Bacteria → Acidobacteria	2278	Open in IMG/M
3300011271\|Ga0137393_11339691	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300012096\|Ga0137389_10726139	Not Available	853	Open in IMG/M
3300012096\|Ga0137389_10871180	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300012189\|Ga0137388_10385639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300012189\|Ga0137388_11244984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012202\|Ga0137363_10067930	All Organisms → cellular organisms → Bacteria → Acidobacteria	2613	Open in IMG/M
3300012203\|Ga0137399_10012791	All Organisms → cellular organisms → Bacteria → Acidobacteria	5147	Open in IMG/M
3300012203\|Ga0137399_10066592	All Organisms → cellular organisms → Bacteria	2685	Open in IMG/M
3300012203\|Ga0137399_10867204	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300012205\|Ga0137362_10009657	All Organisms → cellular organisms → Bacteria	6984	Open in IMG/M
3300012205\|Ga0137362_11767552	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012206\|Ga0137380_10106208	All Organisms → cellular organisms → Bacteria	2566	Open in IMG/M
3300012206\|Ga0137380_10353703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1310	Open in IMG/M
3300012207\|Ga0137381_11568281	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300012207\|Ga0137381_11568283	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300012351\|Ga0137386_10146898	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300012351\|Ga0137386_10789551	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300012357\|Ga0137384_10024087	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4975	Open in IMG/M
3300012357\|Ga0137384_11419560	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300012361\|Ga0137360_10004762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8271	Open in IMG/M
3300012361\|Ga0137360_10210394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1579	Open in IMG/M
3300012363\|Ga0137390_10113380	All Organisms → cellular organisms → Bacteria	2684	Open in IMG/M
3300012363\|Ga0137390_10496485	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300012683\|Ga0137398_10667138	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300012685\|Ga0137397_10244302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300012918\|Ga0137396_10048142	All Organisms → cellular organisms → Bacteria	2914	Open in IMG/M
3300012918\|Ga0137396_10681519	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300012918\|Ga0137396_10742148	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300012918\|Ga0137396_11149333	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300012925\|Ga0137419_10439993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300012925\|Ga0137419_10797683	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300012929\|Ga0137404_10042422	All Organisms → cellular organisms → Bacteria → Acidobacteria	3440	Open in IMG/M
3300012929\|Ga0137404_10055343	All Organisms → cellular organisms → Bacteria → Acidobacteria	3058	Open in IMG/M
3300012930\|Ga0137407_10013247	All Organisms → cellular organisms → Bacteria	5940	Open in IMG/M
3300012930\|Ga0137407_10627803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300012931\|Ga0153915_13193006	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300012971\|Ga0126369_12732851	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300014152\|Ga0181533_1082305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1499	Open in IMG/M
3300015051\|Ga0137414_1200887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4560	Open in IMG/M
3300015054\|Ga0137420_1072112	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300015054\|Ga0137420_1222532	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300015054\|Ga0137420_1270007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1543	Open in IMG/M
3300015241\|Ga0137418_10873552	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300015264\|Ga0137403_10151856	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300015357\|Ga0134072_10428206	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300017929\|Ga0187849_1043739	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2155	Open in IMG/M
3300018004\|Ga0187865_1035055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2145	Open in IMG/M
3300018433\|Ga0066667_10114617	All Organisms → cellular organisms → Bacteria → Acidobacteria	1827	Open in IMG/M
3300018433\|Ga0066667_11645701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300018482\|Ga0066669_10919404	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	784	Open in IMG/M
3300020579\|Ga0210407_11417272	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300020580\|Ga0210403_10920627	Not Available	688	Open in IMG/M
3300020581\|Ga0210399_10139563	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300020581\|Ga0210399_10163610	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300020581\|Ga0210399_10293848	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300021086\|Ga0179596_10731707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300021088\|Ga0210404_10770238	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300021168\|Ga0210406_10653152	Not Available	815	Open in IMG/M
3300021171\|Ga0210405_11184898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300021404\|Ga0210389_11341331	Not Available	547	Open in IMG/M
3300021407\|Ga0210383_10241275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1550	Open in IMG/M
3300021407\|Ga0210383_10735739	Not Available	847	Open in IMG/M
3300021474\|Ga0210390_10077568	All Organisms → cellular organisms → Bacteria → Acidobacteria	2751	Open in IMG/M
3300021478\|Ga0210402_10521300	Not Available	1103	Open in IMG/M
3300021478\|Ga0210402_10782103	Not Available	879	Open in IMG/M
3300021479\|Ga0210410_10674319	Not Available	914	Open in IMG/M
3300021559\|Ga0210409_11054573	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300021560\|Ga0126371_10611172	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300021560\|Ga0126371_11248892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	878	Open in IMG/M
3300022726\|Ga0242654_10129180	Not Available	824	Open in IMG/M
3300024330\|Ga0137417_1193223	All Organisms → cellular organisms → Bacteria → Acidobacteria	1124	Open in IMG/M
3300026295\|Ga0209234_1019142	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	2588	Open in IMG/M
3300026328\|Ga0209802_1194645	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300026333\|Ga0209158_1030690	All Organisms → cellular organisms → Bacteria → Acidobacteria	2328	Open in IMG/M
3300026333\|Ga0209158_1060050	All Organisms → cellular organisms → Bacteria → Acidobacteria	1525	Open in IMG/M
3300026467\|Ga0257154_1060920	Not Available	591	Open in IMG/M
3300026482\|Ga0257172_1033427	Not Available	931	Open in IMG/M
3300026528\|Ga0209378_1279560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300026529\|Ga0209806_1139905	All Organisms → cellular organisms → Bacteria → Acidobacteria	942	Open in IMG/M
3300026551\|Ga0209648_10045272	All Organisms → cellular organisms → Bacteria	3793	Open in IMG/M
3300026557\|Ga0179587_10947211	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300026557\|Ga0179587_10984254	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300027064\|Ga0208724_1012192	Not Available	830	Open in IMG/M
3300027104\|Ga0208095_1010964	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300027173\|Ga0208097_1032637	Not Available	601	Open in IMG/M
3300027633\|Ga0208988_1068138	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300027643\|Ga0209076_1066302	All Organisms → cellular organisms → Bacteria → Acidobacteria	1026	Open in IMG/M
3300027643\|Ga0209076_1075116	All Organisms → cellular organisms → Bacteria → Acidobacteria	961	Open in IMG/M
3300027643\|Ga0209076_1086279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300027663\|Ga0208990_1147791	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300027671\|Ga0209588_1256926	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300027748\|Ga0209689_1231363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300027829\|Ga0209773_10299356	Not Available	671	Open in IMG/M
3300027853\|Ga0209274_10035748	All Organisms → cellular organisms → Bacteria → Acidobacteria	2319	Open in IMG/M
3300027862\|Ga0209701_10520166	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300027884\|Ga0209275_10701128	Not Available	583	Open in IMG/M
3300028536\|Ga0137415_10253465	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300028536\|Ga0137415_10433670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1119	Open in IMG/M
3300028536\|Ga0137415_11167302	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300030940\|Ga0265740_1050494	Not Available	512	Open in IMG/M
3300031421\|Ga0308194_10121887	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300031708\|Ga0310686_110439602	Not Available	639	Open in IMG/M
3300031962\|Ga0307479_11231791	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300031962\|Ga0307479_11365270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300032180\|Ga0307471_100040396	All Organisms → cellular organisms → Bacteria	3729	Open in IMG/M
3300032180\|Ga0307471_100225154	All Organisms → cellular organisms → Bacteria → Acidobacteria	1904	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.00%
Aquatic	Environmental → Aquatic	5.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.00%
Freshwater	Environmental → Aquatic → Freshwater	3.75%
Sediment	Environmental → Aquatic → Sediment	1.25%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.50%
Loam	Environmental → Terrestrial → Soil → Loam	7.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.25%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	40.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.25%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.25%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.62%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101378862	3300000567	Peatlands Soil	MPRAKNFRVYFILTILVVFGIILLLREHRPSFLRPGLHLNAYVST
JGI12636J13339_10136443	3300001154	Forest Soil	MDRPKNFRVYFLPAALALGGIVLLLREHRPSFLRPDLHLSAFVTTA
JGI12269J14319_102999282	3300001356	Peatlands Soil	MPRAKNFRVYFILAILLISGIILLLREHRPSFLRPGLHLNAYVSTD
JGI12635J15846_105804242	3300001593	Forest Soil	MNRPKNFRVYFLLAALAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNVT
JGI25382J43887_104530271	3300002908	Grasslands Soil	MARPRNFRVYFLAVVLGIGGLIVLLREHRPSFLRPDLHLCAYV
JGI25617J43924_101166102	3300002914	Grasslands Soil	MDRPKNFRVYFLLAALAIGGIVLLLREHRPSFLRPDLHLSAYVTTADG
JGI25617J43924_102334321	3300002914	Grasslands Soil	MDRPKNFRAYFLIVVLGISGLIVLLREHRPSFLRPDLHLC
Ga0066672_109775641	3300005167	Soil	MDRPGNSRVYFLSVVLATGALIVLLLEHRPSFLRPDLHLCAYVTTGDGSVTVVDLVKLKA
Ga0066680_104783732	3300005174	Soil	MVRPKNFRTYFLVAVLGISGLIVLLREHRPSFLRPDLHLCAYVTTADGSVTVVD
Ga0066679_101066482	3300005176	Soil	MNRPKNLRAYFLLAALGIGGLVLLLREHRPSFLRPDLHLLAYVSTADGNVTVVDLVRLKA
Ga0066690_103292321	3300005177	Soil	MNRPKNLRAYFLLAALGIGGLVLLLREHRPSFLRPDLHLLAYVS
Ga0066685_100450615	3300005180	Soil	MDRPRNFRVYFASVVLGIGALVVLLREHRPSLLRPDLHLCAYVTTADGSV
Ga0066682_104127301	3300005450	Soil	MNRPRNVRVYFLLAVLLITGLVVLLREHRPSFLRPGLRLYAYVTTADGNVT
Ga0070733_100325885	3300005541	Surface Soil	MNRPRSFRLYFLLAALIIAGLVVILREHRPSFLRPGLRLNAYVTTADGGVTVVD
Ga0066661_102679581	3300005554	Soil	MNRPKNLRAYFLLAALGIGGLVLLLREHRPSFLRPDLHLLAYVSTADGNVT
Ga0066692_101984041	3300005555	Soil	MVRPKNFRTYFLVAVLGISGLIVLLREHRPSFLRPDLH
Ga0066670_107550271	3300005560	Soil	MNRPKNFRAYFLLAALGIGGLVLLLREHRPSFLRPDLHLLAYVSTADGNVTVVDLVRLKAVGRI
Ga0066703_103649252	3300005568	Soil	MNRPKNLRAYFLLAALGIGGLVLLLREHRPSFLRPDLHLLAYVSTADGNVTVVD
Ga0066691_109045392	3300005586	Soil	MDRPRNFRVYFASVVLGIGALTVLLREHRPSLLRPDLHLCSYVTTADGSVAVVD
Ga0070762_102879091	3300005602	Soil	MNRRRNFRVYFLLSILLIAGIVLLLREHRPSFLRPGLRLCAYVSTGDGIVTVID
Ga0066656_105334802	3300006034	Soil	MNRPRNFRVYFLLAVLLITGLVVLLREHRPSFLRPGLRLYAYVTTADGNVTVV
Ga0075029_1010835131	3300006052	Watersheds	MPHSKNFRVYFLLALLLIFGIVILLREHRPSILRPDLHLNAYVS
Ga0075030_1007134211	3300006162	Watersheds	MTSKQNFRAYFVILVLMLTGVIVLLREHRPSLLRPDLHLAAYIG
Ga0070765_1017402742	3300006176	Soil	MNRPKNFRAYFLLAALAIGGMVLLLREHRPSFLRPDLHLSAYVTTADGNVTVVDLVKLKA
Ga0079222_104320792	3300006755	Agricultural Soil	MDRPRNFRVYFASVVLGMGALIVLLREHRPSFLRPDLHLCAYVTTADGSVAVVDLVK
Ga0066665_109974152	3300006796	Soil	MNRPKNFRVYSLMVALAIGGIVLLLREHRPSFLRPDLHLSAYVT
Ga0066659_101825801	3300006797	Soil	MGHPRNFRAYFLLVVLAIGALAVLLREHRPSMLRPDLHL
Ga0066659_104144531	3300006797	Soil	MNRPKNFRVYSLMVALAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNV
Ga0099793_101826862	3300007258	Vadose Zone Soil	MAYMNRPKNFRVYFLLAALSIAGLVVLLREHRPSFLRPDLHLSA*
Ga0099794_100131511	3300007265	Vadose Zone Soil	MNRPKNFRVYFLLAGLAIGGIVLLLREHRPSFLRPDLHLSAY
Ga0099794_102424981	3300007265	Vadose Zone Soil	MNRPKNFRVYFLLAGLAIGGIVLLLREHRPSFLRPDL
Ga0099794_106039332	3300007265	Vadose Zone Soil	MNRLKNFRVCFLLATLAFAGLIVLLREHRPSFLRPGLRLYAYVTTADGGI
Ga0099794_107281432	3300007265	Vadose Zone Soil	MYRPKNFRVYFLLAALAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNVTVVDLVK
Ga0066710_1016387842	3300009012	Grasslands Soil	MNRPKNFRVYFLLPALAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNVTIVDLV
Ga0066710_1025773581	3300009012	Grasslands Soil	MNRPRNFRVYFLLAVLLITGLVVLLREHRPSFLRPGLRLYAYVTTTDGNVTVVD
Ga0099829_101462574	3300009038	Vadose Zone Soil	MDRPKNFRIYLLLAGLAIAGLVVLLREHRPSFLRPDLHLSAYVTTADGNVTVVDLVKLK
Ga0099829_101998001	3300009038	Vadose Zone Soil	MKRPRNFRVYFVVAALAIAGVVVLLREHRPSFLRPDLHLSAYVTTADGNVTVV
Ga0099830_112308672	3300009088	Vadose Zone Soil	MNRPRNFRAYFLVAALGIGGIVLLLREHRPSFLHPDLHLCAYVTTADGNVTVVDLV
Ga0066709_1041693071	3300009137	Grasslands Soil	MNRPKNLRAYFLLAALGIGGLVLLLREHRPSFLRPDLHLLAYVSTADGNVTVVDL
Ga0066709_1046577271	3300009137	Grasslands Soil	MNRPRNFRVYFLLAVLLITGLVVLLREHRPSFLRPGLRLYAYVTTSDANVTVVD
Ga0116225_10664043	3300009524	Peatlands Soil	MPRAKNFRVYFILTILAISGIVLLLREHRPSFLRPGLHLNAYVST
Ga0116137_10576811	3300009549	Peatland	MPRAKNFRVYFILTILVVFGIVLLLREHRPSFLRPGL
Ga0126380_111553111	3300010043	Tropical Forest Soil	MKRPRNFRAYIASATLAIGALIVVMHEHRPSFLRPDLHL
Ga0126384_101027131	3300010046	Tropical Forest Soil	MDRPRNFRLYFASFALAIGALIVLLREHRPSFLRPDLHLCAYVTTADGSVAVVDIVKLKAVAHIP
Ga0134109_101120081	3300010320	Grasslands Soil	MNRPKNFRVYSLMVALAIGGIVLLLREHRPSFLRPDLHL
Ga0134067_100088421	3300010321	Grasslands Soil	MSRPRNLRVYFLSVVVAIGALIVLLREHRPSFLRPDLHLCAYVTTRDGA
Ga0134062_100773861	3300010337	Grasslands Soil	MNRPKNFRVYSLMVALAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNVTVVDL
Ga0126377_109627592	3300010362	Tropical Forest Soil	MDRPRNFRLYFASFALAISALIVLLREHRPSFLRPNLHLCAYVTTAD
Ga0126383_123864912	3300010398	Tropical Forest Soil	MDRPRNFRLYFASALLAICALVVLLREHRPSFLRPDLHLCAYVTTAEGSVTVVDL
Ga0150983_130116541	3300011120	Forest Soil	MKRPRNLRAYFLLAVLPIAGVTLLLREHRPSFLRPDLHLSAFVSTADGNVTVVDLV
Ga0137392_100611791	3300011269	Vadose Zone Soil	MNRPRNFRVYFLLAALAIAGLVVLLREHRPSFLRPDLH
Ga0137392_105312071	3300011269	Vadose Zone Soil	MDRPKNFRAYFLIVVLGISGLIVLLREHRPSFLRPDLHLCAYVTTADGNVTVVDLVK
Ga0137392_113052561	3300011269	Vadose Zone Soil	MNRPKNFRVYFLLAVLAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGSVTVVDLVKLKA
Ga0137393_101083372	3300011271	Vadose Zone Soil	MDRPKNFRAYFLIVVLGISGLIVLLREHRPSFLRPDLHLCAYVTTADGNV
Ga0137393_113396912	3300011271	Vadose Zone Soil	MNRPKNFRAYFLLAALGISGLIVLLREHRPSFLRPDLHL
Ga0137389_107261392	3300012096	Vadose Zone Soil	MNQPRNLRQYFLLAALATAGLVVILREHRPSFLRPGLRL
Ga0137389_108711801	3300012096	Vadose Zone Soil	MKRPRNFRVYLLLAALGVAGLVVLLREHRPSFLRPDLHLSAYVTTADGNVTVVDLVKLQ
Ga0137388_103856391	3300012189	Vadose Zone Soil	MKRPRNFRVYFVVAALAIAGVVVLLREHRPSFLRPDLHLSAYVTTADGNVTVVD
Ga0137388_112449841	3300012189	Vadose Zone Soil	MNRPKNFRAYFLLAALSIAGLVVLLREHRPSFLRPGLRLY
Ga0137363_100679301	3300012202	Vadose Zone Soil	MSRPKNFRMYFLLAALAFAGLTLLLREHRPSFLRPGLRLYA
Ga0137399_100127911	3300012203	Vadose Zone Soil	MNRPKNFRLYFLLAALAFTGLIVLLREHRPSFLRPGLRLYAYVTTADGS
Ga0137399_100665924	3300012203	Vadose Zone Soil	MNRPKNFRVYFLLATLAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGSVTVVDLVKLKPVARIP
Ga0137399_108672042	3300012203	Vadose Zone Soil	MDRPKNFRVYFLLAILAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGSVTVVDLVKLKPVARIP
Ga0137362_100096578	3300012205	Vadose Zone Soil	MNRPKNLRVYFLLAALGITGLVVLLREHRPSFLRPDLHLSAYVSTADGNVTVVDLVKLKA
Ga0137362_117675521	3300012205	Vadose Zone Soil	MNRPKNFRVYFLLAALAIVGIVLLLREHRPSFLRPDLHLSAYVTTADGNVTVVDLVK
Ga0137380_101062083	3300012206	Vadose Zone Soil	MNRPKNFRAYFLLAALAISGLVVLLREHRPSFLRPDLHLCAYVTTADGNVTVVDLVKLKAVAR
Ga0137380_103537032	3300012206	Vadose Zone Soil	MERPRNFRRYFVSTVLAIGALTVLLREHRPSFLRPDLHLCA
Ga0137381_115682812	3300012207	Vadose Zone Soil	MNRPTKNFRAYFLLAALSIAGFMVLLREHRPSFLRPGLRLYAYVTTGDGNV
Ga0137381_115682832	3300012207	Vadose Zone Soil	MNQPTKNFRACFLLAALSIAGFMVLLREHRPSFLRPGLRLYAYVTTGDGNV
Ga0137386_101468984	3300012351	Vadose Zone Soil	MGRPRNFRAYFLSVVVAIGALFVLLREHRPSFLRPDLHLCA
Ga0137386_107895512	3300012351	Vadose Zone Soil	MNRPKNFRAYFLLAALSLAGLIVLLREHRPSFLRPDLHLCAYVTTADGN
Ga0137384_100240875	3300012357	Vadose Zone Soil	MNRPTKNFRAYFLLAALSIAGFMVLLREHRPSFLRPGLRLYAYVTTSDGN
Ga0137384_114195601	3300012357	Vadose Zone Soil	MNRPTKNFCAYFLLAALSIAGFMVLLREHRPSFLRPGLRLYA
Ga0137360_1000476212	3300012361	Vadose Zone Soil	MNRPKNFRVYFLLAALAIGGIVLLLREHRPSFLRSDLHLSAYVTTA
Ga0137360_102103941	3300012361	Vadose Zone Soil	MTGPKNFRLYFLLAALGIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNVTVVD
Ga0137390_101133801	3300012363	Vadose Zone Soil	MNRPKNFRVYFLLATLAIGGIVLLLREHRPSFLRPDL
Ga0137390_104964851	3300012363	Vadose Zone Soil	MNRPKNFRVYFLVAALAIGGMVVLLREHRPSFLRPDLHLCAYVTTADG
Ga0137398_106671381	3300012683	Vadose Zone Soil	MNRPKNFRAYFVAAALGIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNVTVV
Ga0137397_102443021	3300012685	Vadose Zone Soil	MGESLPDMNRTKNFRVYFLLAALALGGLILLLREHRPSFLRPGLRL
Ga0137396_100481421	3300012918	Vadose Zone Soil	LVEPWDNFFAFMSQPKNFRVYFLLVLLAIGGIVLLIREHRPSFLRPDLHLSAYVTTADGNVTVVDLLKLKPVARI
Ga0137396_106815192	3300012918	Vadose Zone Soil	MNRLKNFRVCFLLATLAFAGLIVLLREHRPSFLRPGL
Ga0137396_107421482	3300012918	Vadose Zone Soil	MDRPKNFRVYFLLAILAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGSVTVV
Ga0137396_111493332	3300012918	Vadose Zone Soil	MNRPKNFRVYFLIAALVIAGLVVLLREHRPSFLRPDLHLSAYVSTADGNITVVDL
Ga0137419_104399932	3300012925	Vadose Zone Soil	MNRPRNFRVYFLLAALAFGGLTLLLREHRPSFLRPGLRLYAYVTT
Ga0137419_107976832	3300012925	Vadose Zone Soil	MYRPKNFRVYFLLAALPIGCIHLLLRDHRPSFLRPDLHLSAYVTTADGNVTVVDLVKLK
Ga0137404_100424221	3300012929	Vadose Zone Soil	MNRPKNFRVYFLLAALAIGGIVLLLREHRPSFLRPDLHLSAYVT
Ga0137404_100553433	3300012929	Vadose Zone Soil	MNFRAYFVVAALGIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNVTVV
Ga0137407_100132471	3300012930	Vadose Zone Soil	MNRPRNFRVYFLLAALALGGLILLLREHRPSFLRPGLRLYAYVTT
Ga0137407_106278031	3300012930	Vadose Zone Soil	MPDMSRPKNFRVYFLLAALAFAGLTLLLREHRPSFLRPGLRLYAYVT
Ga0153915_131930061	3300012931	Freshwater Wetlands	MNRPRNFRLLFLAAALLLAGTVVLLREHRPSFLRPGLRLCAYVLTDDGNVTVV
Ga0126369_127328512	3300012971	Tropical Forest Soil	MKRPRNFRAYIASITLAIGALTVVMREHRPSFLRPDLHLCAYVTTTDGTLS
Ga0181533_10823053	3300014152	Bog	MPRAKNFRVYFILTILAISGIVLLLREHRPSFLRPGLHLN
Ga0137414_12008876	3300015051	Vadose Zone Soil	MNRPKNFRAYFVAAALGIGGIVLLLREHRPSFLRPDLHLSLT*
Ga0137420_10721121	3300015054	Vadose Zone Soil	MDRDWRSRCAAWENSNAAMNRPKNFRVYFLLAALAIGGVVLLLREHRPSFLRPDLHLSAYVTSDDGSITVVDLVKLKAVARIPV
Ga0137420_12225321	3300015054	Vadose Zone Soil	MNRPKNFRVYFLLAALAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNITVVDLVKSSIS*
Ga0137420_12700071	3300015054	Vadose Zone Soil	MNRPKNFRAYFVIAALGIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNGNVTV
Ga0137418_108735521	3300015241	Vadose Zone Soil	MDRPKNFRVYFLLAILAIGGIVLLLREHRPSFLRPDLHLSAYVTTA
Ga0137403_101518566	3300015264	Vadose Zone Soil	MNRPKNFRVYFLLAALAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNI
Ga0134072_104282062	3300015357	Grasslands Soil	MNRPKNFRAYFLIAVLGISGLVLLLREHRPSFLQPDLHLSAYVSTADG
Ga0187849_10437391	3300017929	Peatland	MPRAKNFRVYFILTILVVFGIVLLLREHRPSFLRPGLHLNAYVSTEDGSITV
Ga0187865_10350551	3300018004	Peatland	MPRAKNFRVYFILTILVVFGIVLLLREHRPSFLRPGLHLNAYVSTEDG
Ga0066667_101146172	3300018433	Grasslands Soil	MNRPKNLRAYFLLAALGIGGLVLLLREHRPSFLRPDLHLLAYVSTA
Ga0066667_116457011	3300018433	Grasslands Soil	MDRPRNFRVYFASVVLGIGALVVLLREHRPSLLRPDLHLCAYVTTADGSVTVVDLVKLKA
Ga0066669_109194041	3300018482	Grasslands Soil	MSRPRNLRVYFLSVVVAIGALIVLLREHRPSFLRPDLHLCAYVTTRDGAVTVVDLV
Ga0210407_114172721	3300020579	Soil	MNRPKNFRVYFLIAALVIGGIVLLLREHRPSFLRPDLHLS
Ga0210403_109206271	3300020580	Soil	MKRPRNLRAYFLLAVLPIAGVTLLLREHRPSFLRPDLHLSAFVSTADGNVTV
Ga0210399_101395632	3300020581	Soil	MNHPKNFRAYFAVAALAIGGIMLLLREHRPSFLRPDLHLSAYVTTADGNVTV
Ga0210399_101636105	3300020581	Soil	MNRPKNFRVYFLLAALAIGGMVLLLREHRPSFLRPDLHLSAYVTTADGNVTVVDLVKLKAVAR
Ga0210399_102938482	3300020581	Soil	MPHSKNFRVYFLLALLLILAIVILLREHRPSVLRPDLHLNAYISTSDGSL
Ga0179596_107317071	3300021086	Vadose Zone Soil	MNRPRNFRVYFLLGALVITGLVVLLREHRPSFLRPGLRLYAYVTTADGN
Ga0210404_107702382	3300021088	Soil	MKRPKNFRVYFLLAALAIGGMVLLLREHRPSFLRPDLHLSAYVTTADG
Ga0210406_106531521	3300021168	Soil	MERPRNFRVYFLLGVLVITGVVLLVREHRPSFLTPGLRLCAYVSAGDGSV
Ga0210405_111848982	3300021171	Soil	MPHSKNFRVYFLLTLLLIFALVILLREHRPSILRPDLHLNAYI
Ga0210389_113413312	3300021404	Soil	MNRPRNFRVFFLLAILLIAGIVVILREHQPSFLRPGLRLYAYASTS
Ga0210383_102412752	3300021407	Soil	MPHRKNFRVYFLLALLLILAVVILLREHRPSILRPDLHLN
Ga0210383_107357391	3300021407	Soil	MTRPRNFRVYILLVILLIVGVTELVREHRPSFLRPGLRLCAYVSA
Ga0210390_100775685	3300021474	Soil	MPHRKNFRVYFLLTLLLVFALVILLREHRPSILRPDLH
Ga0210402_105213001	3300021478	Soil	MNRPRNFRRYFLFGVLVITGVVLLLREHRPSFLRPGLRLSAYVSAGDGTVTVIDLV
Ga0210402_107821032	3300021478	Soil	MERPRNFRVYFLLGVLVITGVVLLVREHRPSFLTPGLRLCAYVSAGDGSVTVID
Ga0210410_106743191	3300021479	Soil	MNRPRNFRMYFLLGVLVTTGVVLLLREHRPSFLRPGLRLSAY
Ga0210409_110545732	3300021559	Soil	MPHSKNFRVYFLLALLLILAIVILLREHRPSVLRPDLHLNAYISTSDGSLTVV
Ga0126371_106111721	3300021560	Tropical Forest Soil	MDRPRNFRLYFASAVLALGALIVLLREHRPSFLRPDLHLC
Ga0126371_112488921	3300021560	Tropical Forest Soil	VIRPRNFRVFILAGALLVAGIVELLREHRPSFLQPGLRLYAYAATADGAVT
Ga0242654_101291801	3300022726	Soil	MKGPRNLRAYFLLAVLPIAGVTVLLREHRRSFVRPDRHISGF
Ga0137417_11932232	3300024330	Vadose Zone Soil	MDRPKNFRAYFLAAALGISGLIVLLREHRPSFLRPDLHLCAYVTTADGNVTVVDLVRLKAVARI
Ga0209234_10191426	3300026295	Grasslands Soil	MNRPKNFRVYFLLAALAIGGIVLLLREHRPSFLRPDLHLSAY
Ga0209802_11946451	3300026328	Soil	MVRPKNFRTYFLVAVLGISGLIVLLREHRPSFLRPDLHLCAYVTTADGSVTVVDL
Ga0209158_10306903	3300026333	Soil	MVRPKNFRTYFLVAVLGISGLIVLLREHRPSFLRPDLHLCAYVTTADGSVTVVDLVRL
Ga0209158_10600501	3300026333	Soil	MNRPKNFRVYFLLAALAIGGIVLLLREHRPSFLRP
Ga0257154_10609202	3300026467	Soil	MNRPRNFRSYFLLGVLVITGVVLLLREHRPSFLRPGLRLSA
Ga0257172_10334271	3300026482	Soil	MNRPRNFRVYFLLAVLAIGGIVLLLREHRPSFLRPDLHLSAYVT
Ga0209378_12795602	3300026528	Soil	MPNMNRLKNFRVYFLLAALAFAGLTLLLREHRPSFLRPGMRLYAYVTTA
Ga0209806_11399051	3300026529	Soil	MNRPKNLRAYFLLAALGIGGLVLLLREHRPSFLRPDLHLLAYVSTAD
Ga0209648_100452721	3300026551	Grasslands Soil	MNRPKNFRVYFLLAVLAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNVTVVDLVKLKPVAR
Ga0179587_109472111	3300026557	Vadose Zone Soil	MNRPKNFRVYFLLAALAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGNVTVVDLVKLKTVARIP
Ga0179587_109842541	3300026557	Vadose Zone Soil	MNRAKNFRVYFLLAVLATGGIVLLLREHRPSFLRPDLHLSAYVATADG
Ga0208724_10121921	3300027064	Forest Soil	MNHPRNFRVFFLLGVLLIVGVAELVREHRPSFLRPGLRLCAYVSASDGSVTV
Ga0208095_10109642	3300027104	Forest Soil	MDRPRNFRLYFLLAALAVAGLIVLLREHRPSFLRPGLRLYAYVTTTDGNVTVV
Ga0208097_10326372	3300027173	Forest Soil	MNRPRNFRMYFLLGVLVITGVVLLLREHRPSFLRP
Ga0208988_10681381	3300027633	Forest Soil	MNRPKNFRVYFLLAALAMGGMVLLLREHRPSFLRPDLHLS
Ga0209076_10663021	3300027643	Vadose Zone Soil	MNRPRNFRAYFLLAALVIGGIVLLLREHRPSFLHPDLHLCAYVTTADGNVTVIDLV
Ga0209076_10751161	3300027643	Vadose Zone Soil	MDRPKNFRVYFLLAILAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGSVTVVDLVK
Ga0209076_10862792	3300027643	Vadose Zone Soil	MNRPKNFRVCFLLAVLAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGSVTVVDLVKLKPVA
Ga0208990_11477911	3300027663	Forest Soil	MNRPKNFRAYFAVAALAIGGMVLLLREHRPSFLRPDLHLSAYVTTDDGNVTVVDLVKLKA
Ga0209588_12569261	3300027671	Vadose Zone Soil	MNRPKNFRVYFLLAGLAIGGIVLLLREHRPSFLRPDLHLSAYVTTGDGNVTVVDLVKLK
Ga0209689_12313632	3300027748	Soil	MSRPRNLRVYFLSVVVAIGALIVLLREHRPSFLRPDLHLCAYVTTR
Ga0209773_102993562	3300027829	Bog Forest Soil	MNRSRNFRVYFLLGVLLIFGIVVLLREHRPSFLRPGLR
Ga0209274_100357481	3300027853	Soil	MNRPRNFRTYFLLGILLIVGVVLLLREHRPSFLLPGLRLRA
Ga0209701_105201661	3300027862	Vadose Zone Soil	MNRPKNFRAYFLLAALAISGFLVLLREHRPSFLRPDLHLCAYVTTADGTVTVV
Ga0209275_107011281	3300027884	Soil	MTRPRNFRVYILLVILLTVGVVELVREHRPSFLRPGL
Ga0137415_102534652	3300028536	Vadose Zone Soil	MNRPKNFRVCFLLAVLAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGSVTVVDLVK
Ga0137415_104336702	3300028536	Vadose Zone Soil	MYRPKNFRVYFLLAALAIGGIVLLLREHRPSFLRPDLHLSAYVTTADGSVTVVDLVK
Ga0137415_111673021	3300028536	Vadose Zone Soil	MNRPKNFRVYFLLAALAIGGVVLLLREHRPSFLRPDLHLSAYVTSADGSITVVDLVKLKAVAR
Ga0265740_10504941	3300030940	Soil	MNRPRNFRVYILLVILLIVGVTELVREHRPSFLRPGLRLCAYV
Ga0308194_101218871	3300031421	Soil	MNRPKNFRVYFLLATLAIGGIVLLLREHRPSFLRPDLHLSAY
Ga0310686_1104396021	3300031708	Soil	MNRPGNFRVYILLVILLIVGVTELVREHRPSFLRPGLRLCAYVS
Ga0307479_112317911	3300031962	Hardwood Forest Soil	MNRPKNIRAYFLLAALGIAGLVVLLREHRPSFLRPDLHLSAYVSTADGNVTVVDLV
Ga0307479_113652702	3300031962	Hardwood Forest Soil	MNRPKNFRAYFLLAALAISGLVVLLREHRPSFLRPDLHLCAYVTTADGNVTVVDLVK
Ga0307471_1000403964	3300032180	Hardwood Forest Soil	MPHSKNFRVYFLLVLLLIFALVILLREHRPSILRPDLHLNAYIST
Ga0307471_1002251541	3300032180	Hardwood Forest Soil	MNRRNNFRVYFLLAALAFAGLIVLLREHRPSFLRPGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041312

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences