Metagenome / Metatranscriptome Family F041832

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041832
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	53 residues
Representative Sequence	MHRPSAEEFLLTLLETLDELPPDLARRFADLLKKDHVDRPSAIRQLFEDVAGD
Number of Associated Samples	108
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.53 %
% of genes near scaffold ends (potentially truncated)	20.13 %
% of genes from short scaffolds (< 2000 bps)	84.91 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.824 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.723 % of family members)
Environment Ontology (ENVO)	Unclassified (28.931 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.006 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.15% β-sheet: 0.00% Coil/Unstructured: 51.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF13476	AAA_23	67.30
PF02463	SMC_N	4.40
PF00266	Aminotran_5	1.26
PF01261	AP_endonuc_2	1.26
PF00069	Pkinase	1.26
PF03551	PadR	0.63
PF08281	Sigma70_r4_2	0.63
PF03576	Peptidase_S58	0.63
PF00892	EamA	0.63
PF09976	TPR_21	0.63
PF13620	CarboxypepD_reg	0.63
PF05988	DUF899	0.63
PF00296	Bac_luciferase	0.63
PF10282	Lactonase	0.63
PF13649	Methyltransf_25	0.63
PF12704	MacB_PCD	0.63
PF07721	TPR_4	0.63
PF01663	Phosphodiest	0.63
PF03807	F420_oxidored	0.63
PF01676	Metalloenzyme	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.03
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.26
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.63
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.63
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.63
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.63
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.82 %
Unclassified	root	N/A	8.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.82 %
Unclassified	root	N/A	8.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.82 %
Unclassified	root	N/A	8.18 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	76.73 %
Unclassified	root	N/A	8.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.63 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	72.33 %
Unclassified	root	N/A	8.18 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.63 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	72.33 %
Unclassified	root	N/A	8.18 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.63 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	72.33 %
Unclassified	root	N/A	8.18 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	72.33 %
Unclassified	root	N/A	8.18 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	72.33 %
Unclassified	root	N/A	8.18 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.63 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_10178762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1551	Open in IMG/M
2228664021\|ICCgaii200_c0840274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
2228664022\|INPgaii200_c0928656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10846704	Not Available	613	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_102006669	All Organisms → cellular organisms → Bacteria → Acidobacteria	9506	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_102009125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300000550\|F24TB_10923417	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300000956\|JGI10216J12902_101148039	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300000956\|JGI10216J12902_109141042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300000956\|JGI10216J12902_110253841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300000956\|JGI10216J12902_111867572	All Organisms → cellular organisms → Bacteria → Acidobacteria	1011	Open in IMG/M
3300000956\|JGI10216J12902_120726327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1280	Open in IMG/M
3300001431\|F14TB_104162862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300003319\|soilL2_10076460	All Organisms → cellular organisms → Bacteria	4865	Open in IMG/M
3300003319\|soilL2_10226150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300004114\|Ga0062593_100028852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3115	Open in IMG/M
3300004114\|Ga0062593_100552140	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300004156\|Ga0062589_100382080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1134	Open in IMG/M
3300004156\|Ga0062589_101262255	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300004157\|Ga0062590_100144796	All Organisms → cellular organisms → Bacteria → Acidobacteria	1614	Open in IMG/M
3300004157\|Ga0062590_100428043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1097	Open in IMG/M
3300004157\|Ga0062590_101098592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300004463\|Ga0063356_100829969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1294	Open in IMG/M
3300004463\|Ga0063356_101215409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1096	Open in IMG/M
3300004480\|Ga0062592_100183879	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300004480\|Ga0062592_100196218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1417	Open in IMG/M
3300004643\|Ga0062591_100831404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300005093\|Ga0062594_101208090	Not Available	750	Open in IMG/M
3300005093\|Ga0062594_101607051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300005093\|Ga0062594_102985324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300005289\|Ga0065704_10439552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300005293\|Ga0065715_10095493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4073	Open in IMG/M
3300005293\|Ga0065715_10228096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300005293\|Ga0065715_10326889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300005293\|Ga0065715_10649785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300005294\|Ga0065705_10516478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300005294\|Ga0065705_10676984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300005295\|Ga0065707_10778538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300005330\|Ga0070690_100575513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300005332\|Ga0066388_100017987	All Organisms → cellular organisms → Bacteria	6020	Open in IMG/M
3300005337\|Ga0070682_100381810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300005337\|Ga0070682_100434683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300005337\|Ga0070682_102082391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300005339\|Ga0070660_101313096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300005353\|Ga0070669_101242983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300005355\|Ga0070671_100145278	All Organisms → cellular organisms → Bacteria	2002	Open in IMG/M
3300005356\|Ga0070674_100135816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1839	Open in IMG/M
3300005356\|Ga0070674_101133660	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300005366\|Ga0070659_100665864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300005439\|Ga0070711_100087866	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300005441\|Ga0070700_101124653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300005456\|Ga0070678_101491238	Not Available	633	Open in IMG/M
3300005526\|Ga0073909_10653239	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005529\|Ga0070741_10136907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2492	Open in IMG/M
3300005545\|Ga0070695_100494545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300005545\|Ga0070695_101398182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300005546\|Ga0070696_100535027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300005564\|Ga0070664_101139301	Not Available	735	Open in IMG/M
3300005577\|Ga0068857_100167822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1994	Open in IMG/M
3300005615\|Ga0070702_101875651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300005713\|Ga0066905_100460480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1048	Open in IMG/M
3300005713\|Ga0066905_101174491	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005764\|Ga0066903_102380048	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300005764\|Ga0066903_107814341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300005844\|Ga0068862_100996208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300006237\|Ga0097621_100714938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300006580\|Ga0074049_11717676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300006844\|Ga0075428_100050610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4555	Open in IMG/M
3300006845\|Ga0075421_100017914	All Organisms → cellular organisms → Bacteria	8869	Open in IMG/M
3300006845\|Ga0075421_100107788	All Organisms → cellular organisms → Bacteria	3502	Open in IMG/M
3300006845\|Ga0075421_100729295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149	Open in IMG/M
3300006845\|Ga0075421_101589212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300006847\|Ga0075431_100863375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300006852\|Ga0075433_10030433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4606	Open in IMG/M
3300006852\|Ga0075433_11555634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300006854\|Ga0075425_100348623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1704	Open in IMG/M
3300006854\|Ga0075425_100436505	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300006854\|Ga0075425_100658433	Not Available	1203	Open in IMG/M
3300006880\|Ga0075429_100059470	All Organisms → cellular organisms → Bacteria → Acidobacteria	3329	Open in IMG/M
3300006880\|Ga0075429_100284678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1447	Open in IMG/M
3300006881\|Ga0068865_100176128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1644	Open in IMG/M
3300006904\|Ga0075424_100621502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1154	Open in IMG/M
3300006914\|Ga0075436_100171706	All Organisms → cellular organisms → Bacteria → Acidobacteria	1531	Open in IMG/M
3300007076\|Ga0075435_100973303	Not Available	741	Open in IMG/M
3300009094\|Ga0111539_10034376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6147	Open in IMG/M
3300009094\|Ga0111539_10351439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1715	Open in IMG/M
3300009100\|Ga0075418_10526907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1269	Open in IMG/M
3300009101\|Ga0105247_11192645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300009147\|Ga0114129_11643145	Not Available	785	Open in IMG/M
3300009156\|Ga0111538_10085966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4001	Open in IMG/M
3300009162\|Ga0075423_11467730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300009176\|Ga0105242_12759111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300009553\|Ga0105249_12477287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300009810\|Ga0105088_1112326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300010362\|Ga0126377_10044625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3834	Open in IMG/M
3300010366\|Ga0126379_13476475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300010371\|Ga0134125_10613126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1202	Open in IMG/M
3300010401\|Ga0134121_11668399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300010403\|Ga0134123_12395875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300010403\|Ga0134123_13237573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300012944\|Ga0137410_10510582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300012951\|Ga0164300_10647192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300012961\|Ga0164302_10074631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1783	Open in IMG/M
3300012961\|Ga0164302_11144827	Not Available	618	Open in IMG/M
3300012961\|Ga0164302_11722903	Not Available	526	Open in IMG/M
3300012984\|Ga0164309_10765472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300012984\|Ga0164309_11100300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300012986\|Ga0164304_10045438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2358	Open in IMG/M
3300014326\|Ga0157380_13350614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300014968\|Ga0157379_10033343	All Organisms → cellular organisms → Bacteria	4593	Open in IMG/M
3300015371\|Ga0132258_11288228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1847	Open in IMG/M
3300015371\|Ga0132258_12144951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1404	Open in IMG/M
3300015371\|Ga0132258_12498270	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300015372\|Ga0132256_100876733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300015372\|Ga0132256_101064555	Not Available	924	Open in IMG/M
3300015372\|Ga0132256_101465041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300015372\|Ga0132256_103434092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300015373\|Ga0132257_101071852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300015373\|Ga0132257_102001257	Not Available	747	Open in IMG/M
3300015373\|Ga0132257_102076332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300015374\|Ga0132255_100688895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1517	Open in IMG/M
3300018084\|Ga0184629_10066910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1685	Open in IMG/M
3300018422\|Ga0190265_13262893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300024055\|Ga0247794_10269960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300025315\|Ga0207697_10030737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2197	Open in IMG/M
3300025315\|Ga0207697_10075086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1420	Open in IMG/M
3300025900\|Ga0207710_10489937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300025912\|Ga0207707_10483127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1058	Open in IMG/M
3300025917\|Ga0207660_10653445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300025923\|Ga0207681_11487940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300025925\|Ga0207650_11662646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300025930\|Ga0207701_10108590	All Organisms → cellular organisms → Bacteria → Acidobacteria	2483	Open in IMG/M
3300025930\|Ga0207701_10480076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1065	Open in IMG/M
3300025930\|Ga0207701_10977993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300025932\|Ga0207690_10195378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1533	Open in IMG/M
3300025933\|Ga0207706_11642175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300025934\|Ga0207686_11584999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300025940\|Ga0207691_10141576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2119	Open in IMG/M
3300025940\|Ga0207691_11606534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300025986\|Ga0207658_12076051	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300026075\|Ga0207708_11186063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300026075\|Ga0207708_11747488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300027395\|Ga0209996_1069947	Not Available	545	Open in IMG/M
3300027523\|Ga0208890_1048392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300027577\|Ga0209874_1030701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1473	Open in IMG/M
3300027909\|Ga0209382_10011674	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	10894	Open in IMG/M
3300027909\|Ga0209382_10024416	All Organisms → cellular organisms → Bacteria	7315	Open in IMG/M
3300027909\|Ga0209382_11251149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300028381\|Ga0268264_10581450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300028381\|Ga0268264_10699667	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300028592\|Ga0247822_11012994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300028802\|Ga0307503_10102732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221	Open in IMG/M
3300031226\|Ga0307497_10025795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1867	Open in IMG/M
3300031538\|Ga0310888_10120710	Not Available	1362	Open in IMG/M
3300031740\|Ga0307468_100713004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300031892\|Ga0310893_10167818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300031908\|Ga0310900_10158968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1541	Open in IMG/M
3300033551\|Ga0247830_10434614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1026	Open in IMG/M
3300034115\|Ga0364945_0033954	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.46%
Host-Associated	Host-Associated	46.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.83%
Plants	Host-Associated → Plants	46.54%
Aquatic	Environmental → Aquatic	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.47%
Sediment	Environmental → Aquatic → Sediment	0.63%
Floodplain	Environmental → Terrestrial → Floodplain	0.63%
Roots	Host-Associated → Plants → Roots	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.13%
Loam	Environmental → Terrestrial → Soil → Loam	13.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.29%
Sand	Environmental → Terrestrial → Soil → Sand	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.63%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.29%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.14%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.26%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.63%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.63%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.03%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.14%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.52%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.26%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.26%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0847.00006660	2162886013	Switchgrass Rhizosphere	MHRPSAEEFLLTLLETLDELPPDMAARFADLLKNEHVDRAAAIRQLFEDAAGD
ICCgaii200_08402742	2228664021	Soil	MHRPSAEEFLRTLLETLDDLPPDLAQRFAELLKKEHLDRAAAIRQLFEDVASD
INPgaii200_09286562	2228664022	Soil	VHRPSAEEFLLTLLETLDELPPDLARRFADLLKKEDVDRPSAIRQLFEDVAGD
ICChiseqgaiiFebDRAFT_108467041	3300000363	Soil	MHRPSAEEFLRTLLETLDDLPPDLAQRFAELLKKEHLDRAAAIRQLFEDVASD*
INPhiseqgaiiFebDRAFT_1020066692	3300000364	Soil	VHRPSAEEFLLTLLETLDELPPDLARRFADLLKKEDVDRPSAIRQLFEDVAGD*
INPhiseqgaiiFebDRAFT_1020091252	3300000364	Soil	VHRPSAEEFLLTLFETLDELPPDLARRFADLLKKGDVDRASAIRQLFEDVAGD*
F24TB_109234172	3300000550	Soil	MHRPSAEEFLLALLEGLGDLPPELAQRLAEVLARPHVDRSQAIRQLFEEFAGD*
JGI10216J12902_1011480392	3300000956	Soil	VHRPSAEEFLLTLLDTLDEVPPDLARRFADLLKKDHVDRPSAIRQLFEDVAGD*
JGI10216J12902_1091410421	3300000956	Soil	MHRPSAEEFLLTLLETLDELPPDLAQRLAALLQKDHVDRSAAIRQLFEELAGE*
JGI10216J12902_1102538412	3300000956	Soil	MNRPMHRPDAEEFLLTLLGALDELPPDLAERFAALLKNDHVDRSAAIRQLFEDVTGE*
JGI10216J12902_1118675722	3300000956	Soil	MHRPSAEEFLLTLLETLDELPPDLAQRLAAVLKNDEGDRSAAIRQLFEDVAGE*
JGI10216J12902_1207263272	3300000956	Soil	MHRPSAEEFLLTLLEGLDEVPPDLAQRFAVLLTEDHVDRSAAIRQLFEDMAGE*
F14TB_1041628621	3300001431	Soil	SAEEFLLTLLETVEELPPDLARRFAELLKKDHPDRASAIRQLFEDVAGD*
soilL2_100764603	3300003319	Sugarcane Root And Bulk Soil	MHRPSAEEFLLTLLETLDDLPPDLAARFAAVLKQEHMDRSAAIRQLFEEAAGE*
soilL2_102261501	3300003319	Sugarcane Root And Bulk Soil	VHRPSAEEFLLTLLEGLDELPPDLAHRFAEVLKKEHVDRAGAIRQLFEDAAGD*
Ga0062593_1000288522	3300004114	Soil	MHRPSAEEFLLMLLQTLDDLPAELARRFSELLKRDDVDRSAAIRQLFEDVAGD*
Ga0062593_1005521402	3300004114	Soil	MHRPSAEEFLLTLLKTLDELPPDLARRFADLLKQDVVDRPSAIRQMFEDLAGD*
Ga0062589_1003820801	3300004156	Soil	GPVIEELPMHRPSAEEFLLTLLQTLDDLPAELARRFSELLKRDDVDRSAAIRQLFEDVAGD*
Ga0062589_1012622552	3300004156	Soil	MARPSAEEFLLALFETLDELPPDLARRFADLLKKGDVDRSAAIRQLFEDVAGD*
Ga0062590_1001447961	3300004157	Soil	MHRPSAEEFLLTLLETLEELPPELARRLAGLLKKEHVDRASAIRQLFEDVAGD*
Ga0062590_1004280432	3300004157	Soil	SMHRPSAQEFLLTLLDTLDELPPDLTRRFAELLKTEHVDRPAAIRQLFEDIAGD*
Ga0062590_1010985922	3300004157	Soil	LAELEVLMHRPSAEEFLRTLLEALDDLPPDLARRFADLLRKDHVDRPSAIRQLFEDVAGD
Ga0063356_1008299692	3300004463	Arabidopsis Thaliana Rhizosphere	MHRPSAEEFLLTLLETLDELPPGLAQRLAAVLKKDDVDRSAAIRQLFEDVASE*
Ga0063356_1012154091	3300004463	Arabidopsis Thaliana Rhizosphere	HRPSAEEFLLTLLRTLDELPPDLARRFADLLKKDDVDRPSAIRQMFEDIAGD*
Ga0062592_1001838792	3300004480	Soil	MHRPSAEEFLLTLLETLDELPPDLAQRFAELLKKEHVDRASAIRQMFEDAAGD*
Ga0062592_1001962181	3300004480	Soil	MHRPSAEEFLRTLLEALDDLPPDLARRFADLLRKDHVDRPSAIRQLFEDVAGD*
Ga0062591_1008314041	3300004643	Soil	MHRPSAQEFLLTLLDTLDELPPDLARRFAELLKTEHVDRPAAIRQLFEDIAGD*
Ga0062594_1012080901	3300005093	Soil	MHRPSAEEFLLTLLETLDELPPDLARRFSELLKRDDVDRPTAIRQLFED
Ga0062594_1016070512	3300005093	Soil	HRPSAQEFLLTLLDTLDELPPDLARRFAELLKTEHVDRPAAIRQLFEDIAGD*
Ga0062594_1029853242	3300005093	Soil	MHRPSAEEFLQTLLETMDELPPDLAQRVAELLKTQHVDRSAAIRQLFEDVAGE*
Ga0065704_104395522	3300005289	Switchgrass Rhizosphere	MHRPSAEEFLLTLLETLDELPPDMAARFADLLKNEHVDRAAAIRQLFEDAAGD*
Ga0065715_100954931	3300005293	Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDDLPPDLARRLAGLLKKEHADRPAAIRQLFEDVAGD*
Ga0065715_102280962	3300005293	Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDELPPDLARRFSELLKRDDVDRPTAIRQLFEDAAGD*
Ga0065715_103268891	3300005293	Miscanthus Rhizosphere	MHRPSAEEFLLTLLEKIDELPPDLAKRFTELLKKDHVDRASAIRQLFEDVAGD*
Ga0065715_106497852	3300005293	Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDELPPDMAPRFADLLKNEHVDRAAAIRQLFEDAAGD*
Ga0065705_105164781	3300005294	Switchgrass Rhizosphere	MHCPSAEEFLLTLLETLDELPPDLAQRLAAVLKTDHVDRSAAIRQLFEDVASE*
Ga0065705_106769841	3300005294	Switchgrass Rhizosphere	MHRPSAEEFLLTLLQTLDDLPAELARRFSELLKRDDVDRSAAIRQLFEDVAGD*
Ga0065707_107785382	3300005295	Switchgrass Rhizosphere	MHRPSAEEFLVTLLETLDELPPDLAQRLAAVLKTDEVDRSAAIRQLFEEVASE*
Ga0070690_1005755131	3300005330	Switchgrass Rhizosphere	MHRPSAEEFLLTLLDTMDELPPDLVQRVAALLKKEHIDRSAAIRQLFEDVAGE*
Ga0066388_1000179875	3300005332	Tropical Forest Soil	MHRPSAEEFLLTLLETLDELPPDLAERLAVVLKKDDVERSAAIRQLFEDVAGE*
Ga0070682_1003818102	3300005337	Corn Rhizosphere	MHRPSAEEFLLTLLEALDDVPPDLAERFVMLLKKDQVDRSAAIRQLFEDVAGE*
Ga0070682_1004346832	3300005337	Corn Rhizosphere	MHRPSAQEFLLTLLDTLDELPPDLARRFAELLKTEHVDRGAAIRQLFEDIAGD*
Ga0070682_1020823911	3300005337	Corn Rhizosphere	WFSSFIRRGPDMHRPSAEEFLLTLLETLDELPPDLAQRFAELLKKEHVDRASAIRQMFEDAAGD*
Ga0070660_1013130962	3300005339	Corn Rhizosphere	MHRPSAEEFLLSLLEELHDLPPDLSERFANLLKQDHVDRSAAIRQLLEELAGE*
Ga0070669_1012429832	3300005353	Switchgrass Rhizosphere	MHRPSAEEFLLTLLETLDELPPDLARRFADLLKKDHADRPSAIRQLFEDVAGD*
Ga0070671_1001452783	3300005355	Switchgrass Rhizosphere	MHRPSAQEFLLTLLDTLDELPPDLARRFAELLKTEHVDRPAAIRQLFEDIA
Ga0070674_1001358162	3300005356	Miscanthus Rhizosphere	MHRPSAEEFLLTLLDTMDELPPDLAQRVAALLKKEHIDRAAAIRQLFEDVAGE*
Ga0070674_1011336601	3300005356	Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDELPPDLARRFSELLKRDDVDRPTAIRQLFEDVAGD*
Ga0070659_1006658641	3300005366	Corn Rhizosphere	LAELEVLMHRPSAEEFLRTLLEALGDLPPDLARRFADLLGKDHVDRPSAIRQLFEDVAGD
Ga0070711_1000878661	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDELPPELAGRLADLLKKDHVDRASAIRQLFEDAAGD*
Ga0070700_1011246532	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPSAEEFLQTLLETMDELPPDLAQRVAELLKTEHVDRSAAIRQLFEDVAGE*
Ga0070678_1014912381	3300005456	Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDELPPDLARRLTDLLKKDDVDRPSAIRQLFEDVAGD*
Ga0073909_106532391	3300005526	Surface Soil	MHRPSAEEFLLTLLETLDELPPDLARRLADLLKKDDVDRPSAIRQLFEDVAGD*
Ga0070741_101369072	3300005529	Surface Soil	MPRQSADEFLLTLLDTLDDLPPDFASRFVDTLTRGDEERAQAIRQLFEDAAGD*
Ga0070695_1004945452	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPSAAEFLLTLIETLDELPPDLAQRFAELLKKEHVDRASAIRQMFEDAAGD*
Ga0070695_1013981822	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPSAEEFLLTLLERLDDLPPDLAQRLADLLKKDHVDRSAAIRQLFEDVAGD*
Ga0070696_1005350271	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPSAEEFLLTLLEALDDVPPDLAERFVMLLKKDQVDRSAAIRQLFEDGAGE*
Ga0070664_1011393013	3300005564	Corn Rhizosphere	MHRPSAEEFLLTLLETLDELPPDMAARFADLLKNEHVDRAAAIRQLF
Ga0068857_1001678221	3300005577	Corn Rhizosphere	LLTLLETLDELPPDMAARFADLLKNEHVDRAAAIRQLFEDAAGD*
Ga0070702_1018756511	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LEVLMHRPSAEEFLRTLLEALDDLPPDLARRFADLLRKDHVDRPSAIRQLFEDVAGD*
Ga0066905_1004604802	3300005713	Tropical Forest Soil	MHRPSAEEFLLSLLETLDELPPDLAQRFADLLKKDHVDRPSAIRQLFEDVTGD*
Ga0066905_1011744912	3300005713	Tropical Forest Soil	MHRPSAEEFLLTLLDTLNELPPDLARRFADLLKKEHVDRPSAIRQLFEDVAGD*
Ga0066903_1023800482	3300005764	Tropical Forest Soil	MHRPSAEEFLLTLLEELKELPPDLTERFSMLLKNDHVDRSAAIRQLFEDVAGE*
Ga0066903_1078143411	3300005764	Tropical Forest Soil	MHRPSAEEFLLTLLETLDELPPDLAERLAVVLKKDDVDRSAAIRQLFEDVAGE*
Ga0068862_1009962081	3300005844	Switchgrass Rhizosphere	MHRPSAEEFLLTLLETLDDLPPDLARRLAGLLKKEHVDRPAAIRQLFEDVAGD*
Ga0097621_1007149381	3300006237	Miscanthus Rhizosphere	EFLLTLLDTLDELPPDLARRFAELLKTEHVDRPAAIRQLFEDIAGD*
Ga0074049_117176762	3300006580	Soil	MHRPSAEEFLLTLLDTMDELPPDLAQRVAALLKKEHIDRSASIRQLFEDVAGE*
Ga0075428_1000506103	3300006844	Populus Rhizosphere	MHRPSAEEFLLTLLESLEELPPDLAQRLATLLKKDHTDRSAAIRQLFEEIAGE*
Ga0075421_1000179146	3300006845	Populus Rhizosphere	MHRPSADEFLLTLLESLEDLPPDLAQRFAELLKKDHVDRSAAIRQLFEDAGGE*
Ga0075421_1001077881	3300006845	Populus Rhizosphere	MHRPSAEEFLLTLLETMDELPPDLSQRVAALLKKEHVDRSAAIRQ
Ga0075421_1007292952	3300006845	Populus Rhizosphere	MNRPTAQEFLLTLLDTLDELPPDLARRFAALLKQDHVDRSAAIRQLFEDVAGE*
Ga0075421_1015892121	3300006845	Populus Rhizosphere	MHRPSAEEFLLTLLQTLDELPPDLAQRFAALLKQPHLDRSAAIRQLFEETAGE*
Ga0075431_1008633751	3300006847	Populus Rhizosphere	MHRQTAEEFLLTLLETLDDLPPDFASRLAEVIKNDEGDRSQAIRQLFEDVAGD*
Ga0075433_100304333	3300006852	Populus Rhizosphere	MHRPSAEEFLLTLLETLDELPPDLAARVAALLKNDHVDRAAALRQLFEDVTGE*
Ga0075433_115556342	3300006852	Populus Rhizosphere	VHRPSAEEFLLTLLETLDGLPPDLARRFADLLRKDHVDRPSAIRQLFEDAAGD*
Ga0075425_1003486234	3300006854	Populus Rhizosphere	MHRPSAEEFLLTLLETLDGLPPDLARRFADLLKKDHVDRPSAIRQLFEDAAGD*
Ga0075425_1004365052	3300006854	Populus Rhizosphere	MHRPSADEFLLTLLETLDELPPDLAKRFAELLKKDNIDRATAIRQLFEDVAGD*
Ga0075425_1006584332	3300006854	Populus Rhizosphere	MHRPSAEEFLLTLLETLDELPPNLARRFSELLKRDDVDRPTAIRQLFEDAAGD*
Ga0075429_1000594704	3300006880	Populus Rhizosphere	MHRPSAEEFLRTLLETLDDLPPDLAQRFVELLKKEHLDRAAAIRQLFEDVASD*
Ga0075429_1002846781	3300006880	Populus Rhizosphere	MHRPSAEEFLLTLLQSLEELPPDLAQRLATLLKKDHTDRSAAIRQLFEEIAGE*
Ga0068865_1001761282	3300006881	Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDELPPDLARRFADLLKKDHVDRPSAIRQLFEDVAGD*
Ga0075424_1006215021	3300006904	Populus Rhizosphere	HRPSAEEFLLTLLETLDGLPPDLARRFADLLKKDHVDRPSAIRQLFEDAAGD*
Ga0075436_1001717063	3300006914	Populus Rhizosphere	MHRPSAEEFLLTLLETLDDLPPDLAQRLAGLLKKEHADRPAAVRQLFEDVAGD*
Ga0075435_1009733032	3300007076	Populus Rhizosphere	VHRPSAEEFLLTLLETLDGLPPDLARRFADLLKKDHVDRPSAIRQLFEDAAGD*
Ga0111539_100343763	3300009094	Populus Rhizosphere	VHRPSAEQFLLTLLETLEELPPELAQRLAGLVKKEHVDRASAIRQLFEDVAGD*
Ga0111539_103514392	3300009094	Populus Rhizosphere	MHRPSAEEFLQTLLETMDELPPDLAQRVAELLKTKHVDRSAAIRQLFEDVAGE*
Ga0075418_105269072	3300009100	Populus Rhizosphere	VHRPSAEEFLLTLLETLEELPPELAQRLAGLVKKEHVDRASAIRQLFEDVAGD*
Ga0105247_111926451	3300009101	Switchgrass Rhizosphere	MHRPSAEEFLLTLLDTMDELPPDLAQRVAALLKKEHIDRSAAIRQLFEDVAGE*
Ga0114129_116431451	3300009147	Populus Rhizosphere	VHRPSAQEFLLTLLETLEELPPELAQRLAGLVKKEHVDRASAIRQLFEDVAGD*
Ga0111538_100859661	3300009156	Populus Rhizosphere	LPKEEVLMHRPSAEEFLLTLLETLEELPPELAQRLAGLLKKEHVDRASAIRQLFEDVAGD
Ga0075423_114677301	3300009162	Populus Rhizosphere	VHRPSAEEFLLTLLETLEELPPELAQRLAGLVKKEHVDGASEIRQLFK
Ga0105242_127591111	3300009176	Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDEIPPDLARRFADLLKKDHVDRPSAIRQLFEDIAGD*
Ga0105249_124772871	3300009553	Switchgrass Rhizosphere	MHRPSAEEFLQTLLETMDELPPNLAERVAALLKTEHVDRSAAIRQLFEDLAGE*
Ga0105088_11123262	3300009810	Groundwater Sand	MHRPSAEEFLLTLLETLDELPPDLAQRFAALLKKDHVDRSAAIRQLFEDVAGE*
Ga0126377_100446253	3300010362	Tropical Forest Soil	MHRPSAEEFFLTLLKTLDELPPDLAERFAALLKKDDVDRSAAIRQLFEDVAGE*
Ga0126379_134764752	3300010366	Tropical Forest Soil	MHRPSAEEFLLTLLETLDDLPPDLAERLAAVLKKDDVDRSAAIRRLFEDVASE*
Ga0134125_106131262	3300010371	Terrestrial Soil	MHRPSPEEFLLTPLETLDHLPPALARRLAGLLKKEHADRPAAIRQLFEDVAGD*
Ga0134121_116683992	3300010401	Terrestrial Soil	MHRPSAEEFLLTLLETLDELPPDLAERFAGVLKKADVDRSAAIRQLFEDVAGE*
Ga0134123_123958752	3300010403	Terrestrial Soil	MPRPSAEEFLLALFETLDELPPDLARRFADLLKKGDVDRPAAIRQLFEDVAGD*
Ga0134123_132375731	3300010403	Terrestrial Soil	MHRPSAEEFLLTLLEKIDELPPDLAKRFAELLMKDHVDRASAIRQLFEDVAGD*
Ga0137410_105105821	3300012944	Vadose Zone Soil	MHRPSAEEFLLTLLETLDGLPPDLARRLADLLKEDVVDRPSAIRQLFEDAADD*
Ga0164300_106471922	3300012951	Soil	MHRPGADEFLRTLLEALDELPPDLAERFAALLQKDHVDRSAAIRKLFEDVTGE*
Ga0164302_100746312	3300012961	Soil	MHRPSAEEFLLTLLDTMDELQPDLAQRVAALLKKEHIDRSAAIRQLFEDVAGE*
Ga0164302_111448272	3300012961	Soil	MHRPSAEEFLLTLLETLDDLPPDLARRLADLLKKDDIDRPSTIRQLFEDVAGD*
Ga0164302_117229031	3300012961	Soil	MHRPSAQEFLLTLLDTLDELPPDLARRFAELLKTEHVDRPAAIRQLFEDIAG
Ga0164309_107654722	3300012984	Soil	EEFLLTLLETLDDLPPDLARRLADLLKKDEADRPSAIRQLFEDVAGA*
Ga0164309_111003001	3300012984	Soil	MHRPSAEEFLLTLLDTMDELPPDLAQRVAALLKKEHIDRSAAIRQLFEDVSGE*
Ga0164304_100454381	3300012986	Soil	MHRPSAEEFLLTLLETLDDLPPDLARRLADLLKKDEADRPSAIRQLFEDVAGA*
Ga0157380_133506141	3300014326	Switchgrass Rhizosphere	AEEFLQTLLETMDELPPDLAQRVAELLKTEHVDRSAAIRQLFEDVAGE*
Ga0157379_100333432	3300014968	Switchgrass Rhizosphere	MHRPSAQEFLLTLLDTLDELPPDLARRFAELLKTEHVDRSAAIRQLFEDIAGD*
Ga0132258_112882282	3300015371	Arabidopsis Rhizosphere	MHRPSAEEFLLTLLETVDELPPDLAQRLAELLKKEHVDRASAIRQLFEDAAGD*
Ga0132258_121449512	3300015371	Arabidopsis Rhizosphere	MHRPSAEEFLLTLLEKIDELPPDLAKRFAELLKKDHVDRASAIRQLFEDVAGD*
Ga0132258_124982702	3300015371	Arabidopsis Rhizosphere	MHRPSAEEFLLTLLETLDELPPELAGRLADLLKKDHVDRASAIRQLFEDVAGD*
Ga0132256_1008767332	3300015372	Arabidopsis Rhizosphere	MHRPSAEEFLQTLLETMDELPPDLAERVAELLKTKHVDRSAAIRQLFEDVAGE*
Ga0132256_1010645551	3300015372	Arabidopsis Rhizosphere	MHRPSAEEFLLTLLEKFDELPPDLAKRFTELLKKDHVDGASAIRQLFEDVAGD
Ga0132256_1014650412	3300015372	Arabidopsis Rhizosphere	MHRPSAEEILLTLLETLDELPPDMAARFADLLKNEPVDRAAAIRQLFEDAAGD*
Ga0132256_1034340922	3300015372	Arabidopsis Rhizosphere	MHRPSAEEFLLTLLETLDDLPPDLARRFADLLKKEHVDRPSAIRQLFEDAAGD*
Ga0132257_1010718522	3300015373	Arabidopsis Rhizosphere	LLTLLETLDELPPDLARRFADLLKKDHVDRPSAIRQLFEDVAGD*
Ga0132257_1020012571	3300015373	Arabidopsis Rhizosphere	MHRPSAEEFLQTLLETMDELPPDLAQRVAALLKTEHVDRSAAIRQLFEDVAGE*
Ga0132257_1020763321	3300015373	Arabidopsis Rhizosphere	MHRPSAEEFLLTLLEKIDDVPPDLAERFAELLKKDHVDRAAAIRQLFEDVAGD*
Ga0132255_1006888951	3300015374	Arabidopsis Rhizosphere	MHRPSAEEFLLTLLEKIDDVPPDLAERFAELLKKDHVDRASAIRQLFEDVAGD*
Ga0184629_100669102	3300018084	Groundwater Sediment	MHRPSAEEFLLTLLETLDELPPDLARRFADLLKNDGVDRPSAIRQLFEDVAGD
Ga0190265_132628932	3300018422	Soil	MHRPGAEEFLLTLLETLDEIPPDLAQRFAALLKKDHVDRSAAIRQLFEELAGE
Ga0247794_102699602	3300024055	Soil	MHRPSAQEFLLTLLDTLDELPPDLARRFAELLKTEHVDRPAAIRQLFEDIAGD
Ga0207697_100307371	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDELPPDMAARFADLLKNEHVDRAAAIRQLFE
Ga0207697_100750861	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	SAEEFLQTLLETMDELPPDLAQRVAELLKTEHVDRGAAIRQLFEDIAGD
Ga0207710_104899371	3300025900	Switchgrass Rhizosphere	MHRPSAEEFLLTLLDTMDELPPDLAQRVAALLKKEHIDRSAAIRQLFEDVAGE
Ga0207707_104831271	3300025912	Corn Rhizosphere	MHRPSAEEFLLTLLEALDDVPPDLAERFVMLLKKDQVDRSAAIRQLFEDVAGE
Ga0207660_106534452	3300025917	Corn Rhizosphere	MHRPSAEEFLRTLLEALDDLPPDLARRFADLLRKDHVDRPSAIRQLFEDVAGD
Ga0207681_114879401	3300025923	Switchgrass Rhizosphere	MHRPSAEEFLLTLLETLDELPPDLARRFADLLKKDHADRPSAIRQLFEDVAGD
Ga0207650_116626462	3300025925	Switchgrass Rhizosphere	MHRPSAEEFLLTLLETLDELPPDMAPRFADLLKNEHVDRAAAIRQLFEDAAGD
Ga0207701_101085903	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDELPPDLARRFADLLKKDHVDRPSAIRQLFEDVAGD
Ga0207701_104800762	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDELPPDLAQRFAELLKKEHVDRASAIRQMFEDAAGD
Ga0207701_109779932	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPSAEEFLLTLLEKFDELPPDLAKRFTELLKKDHVDRASAIRQLFEDVAGD
Ga0207690_101953782	3300025932	Corn Rhizosphere	MHRPSAEEFLRTLLEALGDLPPDLARRFADLLGKDHVDRPSAIRQLFEDVAGD
Ga0207706_116421751	3300025933	Corn Rhizosphere	MPRPSAEEFLLALFETLDELPPDLARRFADLLKKGDVDRPAAIRQLFEDVAGD
Ga0207686_115849992	3300025934	Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDEIPPDLARRFADLLKKDHADRPSAIRQLFEDVAGD
Ga0207691_101415761	3300025940	Miscanthus Rhizosphere	MHRPSAEEFLLTLLETLDELPPDMAARFADLLKNEHVDRAAAIRQLFEDAA
Ga0207691_116065342	3300025940	Miscanthus Rhizosphere	MHRPSAEEFLLTLLQTLDDLPAELARRFSELLKRDDVDRSAAIRQLFEDVAGD
Ga0207658_120760511	3300025986	Switchgrass Rhizosphere	MHRPSAEEFLLTLLDTMDELPPDLVQRVAALLKKEHIDRSAAIRQLFED
Ga0207708_111860631	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPSAEEFLQTLLETMDELPPDLAQRVAELLKTEHVDRSAAIRQLFEDVAGE
Ga0207708_117474881	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MHRPSAEEFLLTLLEKIDELPPDLAKRFAELLMKDHVDRASAIRQLFEDVAGD
Ga0209996_10699472	3300027395	Arabidopsis Thaliana Rhizosphere	MHRPSAEEFLLTLLRTLDELPPDLARRFADLLKKDDVDRPSAIRQMFEDI
Ga0208890_10483922	3300027523	Soil	MHRPSAEEFLLTLLDTMDELPPDLAQRVAALLKKEHIDRSASIRQLFEDVAGE
Ga0209874_10307012	3300027577	Groundwater Sand	MHRPSAEEFLLTLLETLDELPPDLAQRFADLLRKNHVDRSAAIRQLFEDVAGE
Ga0209382_100116747	3300027909	Populus Rhizosphere	MHRPSADEFLLTLLESLEDLPPDLAQRFAELLKKDHVDRSAAIRQLFEDAGGE
Ga0209382_100244163	3300027909	Populus Rhizosphere	MHRPSAEEFLLTLLESLEELPPDLAQRLATLLKKDHTDRSAAIRQLFEEIAGE
Ga0209382_112511491	3300027909	Populus Rhizosphere	MHRPSAEEFLLTLLQTLDELPPDLAQRFAALLKQPHLDRSAAIRQLFEETAGE
Ga0268264_105814502	3300028381	Switchgrass Rhizosphere	MHRPSAEEFLLTLLETLDELPPDLARRFSELLKRDDVDRSTAIRQLFEDVAGD
Ga0268264_106996671	3300028381	Switchgrass Rhizosphere	MHRPSAEEFLLTLLDTMDELPPDLAQRVAALLKKEHIDRAAAIRQ
Ga0247822_110129941	3300028592	Soil	MHRPSAEEFLLTLLETMDELPPDLSQRVAALLKKEHVDRSAAIRQLFEDLAGE
Ga0307503_101027322	3300028802	Soil	MHRPSAEEFLLTLLETLDDLPPDLARRFADLLKKEHVDRPSAIRQLFEDAAGD
Ga0307497_100257952	3300031226	Soil	MHRPSAEEFLLTLLETLNELPPDLARRLADLLKEEHVDRPAAIRQLFEDVAGD
Ga0310888_101207101	3300031538	Soil	MHCPSAEEFLLTLLETLDELPPDLAQRLAAVLTKGDVDRSAAIRELFEDVASE
Ga0307468_1007130041	3300031740	Hardwood Forest Soil	MHRPSAEEFLLTLLETLDGLPPDLARRFTDLLKKDHVDRPSAIRQLFEDVAGD
Ga0310893_101678182	3300031892	Soil	MHCPSAEEFLLTLLETLDELPPDLAQRLAAVLKKGDVDRSAAIRELFEDVASE
Ga0310900_101589682	3300031908	Soil	MHCPSAEEFLLTLLETLDELPPVLAQRLAAVLTKGDVDRSAAIRELFEDVASE
Ga0247830_104346142	3300033551	Soil	MHRQTAEEFLLTLLETLDDLPPDFARRLAEVVKNEEGDRSQAIRQLFEDGAGD
Ga0364945_0033954_140_301	3300034115	Sediment	MHRPSAEEFLLTLLDTMDELPPDLAQRVVALLKKEHVDRSAAIRQLFEDAAGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041832

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences